Homology
BLAST of CmoCh06G014060 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 847.4 bits (2188), Expect = 1.2e-244
Identity = 417/725 (57.52%), Postives = 538/725 (74.21%), Query Frame = 0
Query: 13 LQLPP--YPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLS 72
+ LPP T N + LS SL HIKQ+HA ILR+ +S LF L +SS S+
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSI- 60
Query: 73 PSLDYALSVFDQIPE-PKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPL 132
+L YAL+VF IP P+S N LR+LSR SEP + Y+++R G LD+F F P+
Sbjct: 61 -NLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPI 120
Query: 133 LKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDV 192
LKA S+ +L GME+HG+A K+ DPFVETG + MYA+C RI AR VFD+MS RDV
Sbjct: 121 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 180
Query: 193 VTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKVHEF 252
VTW+ MI+ YC G D AF+LFEEMK + + PDEMIL I+SAC R GN+ + ++EF
Sbjct: 181 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 240
Query: 253 ITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGLAKGGQIGDA 312
+ + ++ MD HL +AL+ MYA G D+A + + K+S +N+ +STAMVSG +K G++ DA
Sbjct: 241 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 300
Query: 313 RYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVISACAHL 372
+ +FDQ +KDL+CW+ MIS Y ESD PQEAL +F++M G+KPDVV+M SVISACA+L
Sbjct: 301 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 360
Query: 373 GALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVISWTSMI 432
G LD+AKW+ + NG LSINNALI+MYAKCG L+ R++F KMP++NV+SW+SMI
Sbjct: 361 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 420
Query: 433 NALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMINEYGI 492
NAL+MHG+A ALSLF +MK ENVEPN +TFVG+LY CSH GLVEEG++IF SM +EY I
Sbjct: 421 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 480
Query: 493 SPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELGEFAAK 552
+PK EH+GCMVDLFGRA LLREALEV+E+MP A N +IWGSLM+AC++HG+ ELG+FAAK
Sbjct: 481 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 540
Query: 553 QVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNEVHEFQ 612
++L+LEPDHDGALV++SNIYA+E+RWED +R++M E V KE+G SRI+ N + HEF
Sbjct: 541 RILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFL 600
Query: 613 MADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKLALCYA 672
+ D++HKQ++ IY KL+EVV LKLAGY P VLVD+++EEKK+LVLWHSEKLALC+
Sbjct: 601 IGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFG 660
Query: 673 LMNEGSR--------ICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCS 727
LMNE I I+KNLR+CEDCH F KL SKVY REI+VRDRTRFH Y++G CS
Sbjct: 661 LMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCS 720
BLAST of CmoCh06G014060 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 583.2 bits (1502), Expect = 4.1e-165
Identity = 296/732 (40.44%), Postives = 459/732 (62.70%), Query Frame = 0
Query: 12 PLQLPPYP--TKPNALS---------AALSSATSLLHIKQVHAQILRS-KFERSDSDSLL 71
PL LP +P + PN + + + SL +KQ H ++R+ F S S L
Sbjct: 9 PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68
Query: 72 FKLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGL 131
F +++ S SL+YA VFD+IP+P S N L+R + G +P +++ + M +E
Sbjct: 69 F--AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQ 128
Query: 132 SL-DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEAR 191
+++ FP L+KAA+ SL G +HG+A K GSD FV LI Y +C + A
Sbjct: 129 CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSAC 188
Query: 192 LVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAG 251
VF + ++DVV+W+ MI+G+ G D A +LF++M+ ++ + + +LSACA+
Sbjct: 189 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 248
Query: 252 NLDFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVS 311
NL+FG +V +I + + ++ L +A++ MY CGS + A L++ + K+ V T M+
Sbjct: 249 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 308
Query: 312 GLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-QLGMKPDVV 371
G A AR V + M +KD++ W+A+IS Y ++ P EAL++F ++Q Q MK + +
Sbjct: 309 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 368
Query: 372 TMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKM 431
T++S +SACA +GAL+ +WI Y+ K+G + +ALI MY+KCG LE +RE+F +
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 428
Query: 432 PKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQ 491
K++V W++MI LAMHG + A+ +F++M+ NV+PN +TF + ACSH GLV+E +
Sbjct: 429 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 488
Query: 492 RIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQL 551
+FH M + YGI P+ +H+ C+VD+ GR+ L +A++ +EAMP P+ +WG+L+ AC++
Sbjct: 489 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 548
Query: 552 HGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCS 611
H + L E A ++L+LEP +DGA V+LSNIYAK +WE+ E+RK M G+ KE GCS
Sbjct: 549 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 608
Query: 612 RIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELV 671
IE++ +HEF D H ++ +Y KL+EV++ LK GY P+ + VL +++EE KE
Sbjct: 609 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQS 668
Query: 672 L-WHSEKLALCYALMNEGSR--ICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHH 727
L HSEKLA+CY L++ + I +IKNLR+C DCH+ KL S++Y REI+VRDR RFHH
Sbjct: 669 LNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHH 728
BLAST of CmoCh06G014060 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 554.3 bits (1427), Expect = 2.1e-156
Identity = 292/750 (38.93%), Postives = 444/750 (59.20%), Query Frame = 0
Query: 16 PPYPTKPNALS-AALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLSP--- 75
PPY + N S + L + +L ++ +HAQ++ K +++ L KLI C LSP
Sbjct: 26 PPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMI--KIGLHNTNYALSKLI-EFCILSPHFE 85
Query: 76 SLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPLLK 135
L YA+SVF I EP N + R + S+P +AL +Y M + GL + + FP +LK
Sbjct: 86 GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 145
Query: 136 AASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQR---- 195
+ +++ + + G +IHG KLG D +V T LI MY R+ +A VFDK R
Sbjct: 146 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 205
Query: 196 ---------------------------DVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGL 255
DVV+W+ MI GY +G Y A +LF++M +T +
Sbjct: 206 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 265
Query: 256 EPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWD 315
PDE + T++SACA++G+++ G +VH +I + + +ALI +Y+ CG + A
Sbjct: 266 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 325
Query: 316 LYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEA 375
L+E++ KD+I W+ +I GYT + +EA
Sbjct: 326 LFERLP-------------------------------YKDVISWNTLIGGYTHMNLYKEA 385
Query: 376 LVLFKKMQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDK--NGFGKALSINNALI 435
L+LF++M + G P+ VTMLS++ ACAHLGA+D +WI +Y+DK G A S+ +LI
Sbjct: 386 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 445
Query: 436 DMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWI 495
DMYAKCG +E A ++F + K++ SW +MI AMHG A + LF +M+ ++P+ I
Sbjct: 446 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 505
Query: 496 TFVGLLYACSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEA 555
TFVGLL ACSH G+++ G+ IF +M +Y ++PK EH+GCM+DL G + L +EA E++
Sbjct: 506 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 565
Query: 556 MPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDA 615
M P+ +IW SL+ AC++HG+ ELGE A+ ++K+EP++ G+ V+LSNIYA RW +
Sbjct: 566 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 625
Query: 616 GEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYT 675
+ R L+N+ G+ K GCS IE+++ VHEF + D+ H + IY L E+ L+ AG+
Sbjct: 626 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 685
Query: 676 PQTNCVLVDLDDEEKKELVLWHSEKLALCYALMN--EGSRICIIKNLRICEDCHAFMKLA 727
P T+ VL ++++E K+ + HSEKLA+ + L++ G+++ I+KNLR+C +CH KL
Sbjct: 686 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLI 741
BLAST of CmoCh06G014060 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 521.9 bits (1343), Expect = 1.1e-146
Identity = 282/811 (34.77%), Postives = 438/811 (54.01%), Query Frame = 0
Query: 24 ALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLS--PSLDYALSVFD 83
A ++L + ++ +K H + + + + S + KL+ SC L SL +A VF+
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLD--NDVSTITKLVARSCELGTRESLSFAKEVFE 93
Query: 84 QIPEPKSRFC-NKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPLLKAASRNLSLR 143
+ F N L+R + A+ ++ +M G+S D++ FP L A +++ +
Sbjct: 94 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 153
Query: 144 TGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYC 203
G++IHGL K+G+ D FV+ L+ YA C + AR VFD+MS+R+VV+W+ MI GY
Sbjct: 154 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 213
Query: 204 ISGYYDLAFQLFEEMKR-TGLEPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDP 263
+ A LF M R + P+ + + ++SACA+ +L+ G KV+ FI I ++
Sbjct: 214 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 273
Query: 264 HLQSALIKMYASCGSTDLA----------------------------------------- 323
+ SAL+ MY C + D+A
Sbjct: 274 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 333
Query: 324 ---------------------------------------WD------------------- 383
WD
Sbjct: 334 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 393
Query: 384 --LYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQ 443
+++++S K +V ++V+G + G++ A F+ M EK+++ W+ +ISG + +
Sbjct: 394 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 453
Query: 444 EALVLFKKMQ-QLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNAL 503
EA+ +F MQ Q G+ D VTM+S+ SAC HLGALD AKWI Y++KNG + + L
Sbjct: 454 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 513
Query: 504 IDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNW 563
+DM+++CG E A IF + ++V +WT+ I A+AM G+A A+ LF M + ++P+
Sbjct: 514 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 573
Query: 564 ITFVGLLYACSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVE 623
+ FVG L ACSHGGLV++G+ IF+SM+ +G+SP+ H+GCMVDL GRA LL EA++++E
Sbjct: 574 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 633
Query: 624 AMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWED 683
MP PN +IW SL+AAC++ G+ E+ +AA+++ L P+ G+ V+LSN+YA RW D
Sbjct: 634 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 693
Query: 684 AGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGY 727
+VR M E G+ K G S I++ + HEF D H + I L+EV Q G+
Sbjct: 694 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 753
BLAST of CmoCh06G014060 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 510.8 bits (1314), Expect = 2.6e-143
Identity = 264/705 (37.45%), Postives = 422/705 (59.86%), Query Frame = 0
Query: 26 SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLSPSLDYALSVFDQIPE 85
++ + SAT +KQ+HA++L + S L+ KLI +S S + +A VFD +P
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQ--FSGFLITKLIHASSSFG-DITFARQVFDDLPR 84
Query: 86 PKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPLLKAASRNLSLRTGMEI 145
P+ N ++R SR + ++AL +Y M+ +S D F FP LLKA S L+ G +
Sbjct: 85 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 144
Query: 146 HGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFD--KMSQRDVVTWSIMIDGYCISG 205
H +LGF +D FV+ GLI +YA CRR+ AR VF+ + +R +V+W+ ++ Y +G
Sbjct: 145 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 204
Query: 206 YYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDPHLQS 265
A ++F +M++ ++PD + L ++L+A +L G +H + K + ++P L
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 264
Query: 266 ALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLIC 325
+L MYA C GQ+ A+ +FD+M +LI
Sbjct: 265 SLNTMYAKC-------------------------------GQVATAKILFDKMKSPNLIL 324
Query: 326 WSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVD 385
W+AMISGY ++ +EA+ +F +M ++PD +++ S ISACA +G+L+QA+ + YV
Sbjct: 325 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 384
Query: 386 KNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALS 445
++ + + I++ALIDM+AKCGS+EGAR +F + ++V+ W++MI +HG A A+S
Sbjct: 385 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 444
Query: 446 LFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLF 505
L+ M+ V PN +TF+GLL AC+H G+V EG F+ M ++ I+P+ +H+ C++DL
Sbjct: 445 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 504
Query: 506 GRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALV 565
GRA L +A EV++ MP P +WG+L++AC+ H ELGE+AA+Q+ ++P + G V
Sbjct: 505 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 564
Query: 566 VLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQ 625
LSN+YA R W+ EVR M E G++K+ GCS +E+ + F++ D+ H + + I +
Sbjct: 565 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 624
Query: 626 KLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKLALCYALMN--EGSRICIIK 685
++ + LK G+ + L DL+DEE +E + HSE++A+ Y L++ +G+ + I K
Sbjct: 625 QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITK 684
Query: 686 NLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSCKDYW 727
NLR C +CHA KL SK+ REIVVRD RFHH++DG CSC DYW
Sbjct: 685 NLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of CmoCh06G014060 vs. ExPASy TrEMBL
Match:
A0A6J1H7U5 (pentatricopeptide repeat-containing protein At4g14820 OS=Cucurbita moschata OX=3662 GN=LOC111460103 PE=3 SV=1)
HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 726/726 (100.00%), Postives = 726/726 (100.00%), Query Frame = 0
Query: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS
Sbjct: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL
Sbjct: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
Query: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
Query: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
Query: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC
Sbjct: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of CmoCh06G014060 vs. ExPASy TrEMBL
Match:
A0A6J1IE29 (pentatricopeptide repeat-containing protein At4g14820-like OS=Cucurbita maxima OX=3661 GN=LOC111474723 PE=3 SV=1)
HSP 1 Score: 1450.3 bits (3753), Expect = 0.0e+00
Identity = 712/726 (98.07%), Postives = 720/726 (99.17%), Query Frame = 0
Query: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
METLSHTTSILPLQLPPYPT+PNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
KLILSSC+LSPSLDYALSVFDQIPEPK+RFCNKLLRELSRGSEPENALFVYEKMRAEGLS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
FDKMSQRDVVTWSIMIDGYC+SGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
DFGTK+HEFITKKNIVMDPHLQSALIKMYAS GSTDLAWDLYEKISPKNMVISTAMVSGL
Sbjct: 241 DFGTKIHEFITKKNIVMDPHLQSALIKMYASYGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQ+GMKPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQMGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
NVISWTSMINALAMHGDAH ALSLFHQMKVENVEPNWITFVGLLYACSHGGLV+EGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVKEGQRIF 480
Query: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLH D
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHSD 540
Query: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
LNNEVHEFQMADRKHKQADLIY KLNEVVQ LKLAGYTPQTNCVLVDLD+EEKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
SEKLALCYALMNEGSRICI KNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC
Sbjct: 661 SEKLALCYALMNEGSRICITKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of CmoCh06G014060 vs. ExPASy TrEMBL
Match:
A0A6J1ICZ7 (pentatricopeptide repeat-containing protein At4g14820-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474723 PE=3 SV=1)
HSP 1 Score: 1441.4 bits (3730), Expect = 0.0e+00
Identity = 712/738 (96.48%), Postives = 720/738 (97.56%), Query Frame = 0
Query: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
METLSHTTSILPLQLPPYPT+PNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
KLILSSC+LSPSLDYALSVFDQIPEPK+RFCNKLLRELSRGSEPENALFVYEKMRAEGLS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
FDKMSQRDVVTWSIMIDGYC+SGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
DFGTK+HEFITKKNIVMDPHLQSALIKMYAS GSTDLAWDLYEKISPKNMVISTAMVSGL
Sbjct: 241 DFGTKIHEFITKKNIVMDPHLQSALIKMYASYGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQ+GMKPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQMGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
NVISWTSMINALAMHGDAH ALSLFHQMKVENVEPNWITFVGLLYACSHGGLV+EGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVKEGQRIF 480
Query: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLH D
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHSD 540
Query: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
LNNEVHEFQMADRKHKQADLIY KLNEVVQ LKLAGYTPQTNCVLVDLD+EEKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCYALMNEGSR------------ICIIKNLRICEDCHAFMKLASKVYAREIVVRD 720
SEKLALCYALMNEGSR ICI KNLRICEDCHAFMKLASKVYAREIVVRD
Sbjct: 661 SEKLALCYALMNEGSRICITKNLRICEGICITKNLRICEDCHAFMKLASKVYAREIVVRD 720
Query: 721 RTRFHHYRDGSCSCKDYW 727
RTRFHHYRDGSCSCKDYW
Sbjct: 721 RTRFHHYRDGSCSCKDYW 738
BLAST of CmoCh06G014060 vs. ExPASy TrEMBL
Match:
A0A6J1C8N9 (pentatricopeptide repeat-containing protein At4g14820 OS=Momordica charantia OX=3673 GN=LOC111009402 PE=3 SV=1)
HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 634/726 (87.33%), Postives = 685/726 (94.35%), Query Frame = 0
Query: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
METLSH+TS LPLQ + T+P L+AAL+SA++LLH+KQVH QILRSKFER DSDSLLF
Sbjct: 1 METLSHSTSALPLQYHAFSTRPTTLAAALASASTLLHLKQVHVQILRSKFERYDSDSLLF 60
Query: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
KL+LSSC+LS SLDYALSVFDQIPEPK+RFCNKLLRELSRG +PENALFVYEKMRAEGLS
Sbjct: 61 KLVLSSCALSSSLDYALSVFDQIPEPKTRFCNKLLRELSRGPKPENALFVYEKMRAEGLS 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
LDRF FPP+LKAASRNLSLRTGMEIHGLASKLGFG DPFVETGL+RMYAAC R+MEARLV
Sbjct: 121 LDRFSFPPILKAASRNLSLRTGMEIHGLASKLGFGPDPFVETGLVRMYAACGRLMEARLV 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
FDKMS RDVVTWSIMIDGYCISG YDLAFQLFEEMKRT +EPDEMILSTI+SACARAGNL
Sbjct: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTDMEPDEMILSTIISACARAGNL 240
Query: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
D+GT++HEFITKKNIVMDPHLQSALI MYASCGS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DYGTRIHEFITKKNIVMDPHLQSALITMYASCGSMDLAWDLYEKISPKNMVVSTAMVSGL 300
Query: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
+K GQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ LG+KPDVVTML
Sbjct: 301 SKCGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQLLGIKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
SVISACAHLGAL+QA WI YVDKNGF KALS+NNALIDMYAKCGSLEGARE+F KMPKK
Sbjct: 361 SVISACAHLGALEQANWICTYVDKNGFDKALSVNNALIDMYAKCGSLEGAREVFKKMPKK 420
Query: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
NVISWT MINA AMHGD+H AL+LFHQMK ENVEPNWITFVG+LYACSHGGLVEEG++IF
Sbjct: 421 NVISWTCMINASAMHGDSHNALNLFHQMKDENVEPNWITFVGVLYACSHGGLVEEGRKIF 480
Query: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
HSMIN+YGISPKHEHFGCMVDLFGRA LLREALE++EAMPFAPNAIIWGSLMAACQ++G+
Sbjct: 481 HSMINDYGISPKHEHFGCMVDLFGRANLLREALEMIEAMPFAPNAIIWGSLMAACQVYGE 540
Query: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEP+HDGA VVLSN+YAKERRWED GEVRKLMNEMGV+KERGCSR+E
Sbjct: 541 TELGEFAAKQVLKLEPNHDGAFVVLSNVYAKERRWEDVGEVRKLMNEMGVAKERGCSRVE 600
Query: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
LNNEVHEFQMADRKH+QAD IYQKL+EVVQ LK+AGYTP+ +CVLVDLD+EE+KE +LWH
Sbjct: 601 LNNEVHEFQMADRKHRQADQIYQKLDEVVQKLKMAGYTPRVDCVLVDLDEEERKEAILWH 660
Query: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
SEKLALCYALMNEGS I IIKNLRICEDCH FMKLASKVYAREI++RDRTRFHHYRDGSC
Sbjct: 661 SEKLALCYALMNEGSHIRIIKNLRICEDCHTFMKLASKVYAREIIIRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SC DYW
Sbjct: 721 SCNDYW 726
BLAST of CmoCh06G014060 vs. ExPASy TrEMBL
Match:
D7T700 (DYW_deaminase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g03630 PE=3 SV=1)
HSP 1 Score: 1068.9 bits (2763), Expect = 9.2e-309
Identity = 521/724 (71.96%), Postives = 605/724 (83.56%), Query Frame = 0
Query: 13 LQLPPYPT--------KPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLIL 72
L LPP P + L +ALSSATSL H+KQVHAQILRSK +R S SLL KL++
Sbjct: 6 LALPPNPNPATPTTLHSHHTLFSALSSATSLTHLKQVHAQILRSKLDR--STSLLVKLVI 65
Query: 73 SSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLSLDRF 132
SSC+LS SLDYALSVF+ IP+P++ CN+ LRELSR EPE L VYE+MR +GL++DRF
Sbjct: 66 SSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRF 125
Query: 133 CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKM 192
FPPLLKA SR SL G+EIHGLA+KLGF SDPFV+TGL+RMYAAC RI EARL+FDKM
Sbjct: 126 SFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKM 185
Query: 193 SQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGT 252
RDVVTWSIMIDGYC SG ++ A LFEEMK +EPDEM+LST+LSAC RAGNL +G
Sbjct: 186 FHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGK 245
Query: 253 KVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGLAKGG 312
+H+FI + NIV+DPHLQSAL+ MYASCGS DLA +L+EK++PKN+V STAMV+G +K G
Sbjct: 246 MIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLG 305
Query: 313 QIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVIS 372
QI +AR VF+QMV+KDL+CWSAMISGY ESD PQEAL LF +MQ LG+KPD VTMLSVI+
Sbjct: 306 QIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVIT 365
Query: 373 ACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVIS 432
ACAHLGALDQAKWI ++VDKNGFG AL INNALI+MYAKCGSLE AR IF KMP+KNVIS
Sbjct: 366 ACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVIS 425
Query: 433 WTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMI 492
WT MI+A AMHGDA +AL FHQM+ EN+EPN ITFVG+LYACSH GLVEEG++IF+SMI
Sbjct: 426 WTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMI 485
Query: 493 NEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELG 552
NE+ I+PKH H+GCMVDLFGRA LLREALE+VEAMP APN IIWGSLMAAC++HG+ ELG
Sbjct: 486 NEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELG 545
Query: 553 EFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNE 612
EFAAK++L+L+PDHDGA V LSNIYAK RRWED G+VRKLM G+SKERGCSR ELNNE
Sbjct: 546 EFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNE 605
Query: 613 VHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKL 672
+HEF +ADR HK AD IY+KL EVV LKL GY+P T +LVDL++EEKKE+VLWHSEKL
Sbjct: 606 IHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKL 665
Query: 673 ALCYALMNEGSRIC--IIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSC 727
ALCY LM +G+ C IIKNLR+CEDCH F+KLASKVY REIVVRDRTRFHHY+DG CSC
Sbjct: 666 ALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSC 725
BLAST of CmoCh06G014060 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 847.4 bits (2188), Expect = 8.3e-246
Identity = 417/725 (57.52%), Postives = 538/725 (74.21%), Query Frame = 0
Query: 13 LQLPP--YPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLS 72
+ LPP T N + LS SL HIKQ+HA ILR+ +S LF L +SS S+
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSI- 60
Query: 73 PSLDYALSVFDQIPE-PKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPL 132
+L YAL+VF IP P+S N LR+LSR SEP + Y+++R G LD+F F P+
Sbjct: 61 -NLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPI 120
Query: 133 LKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDV 192
LKA S+ +L GME+HG+A K+ DPFVETG + MYA+C RI AR VFD+MS RDV
Sbjct: 121 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 180
Query: 193 VTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKVHEF 252
VTW+ MI+ YC G D AF+LFEEMK + + PDEMIL I+SAC R GN+ + ++EF
Sbjct: 181 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 240
Query: 253 ITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGLAKGGQIGDA 312
+ + ++ MD HL +AL+ MYA G D+A + + K+S +N+ +STAMVSG +K G++ DA
Sbjct: 241 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 300
Query: 313 RYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVISACAHL 372
+ +FDQ +KDL+CW+ MIS Y ESD PQEAL +F++M G+KPDVV+M SVISACA+L
Sbjct: 301 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 360
Query: 373 GALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVISWTSMI 432
G LD+AKW+ + NG LSINNALI+MYAKCG L+ R++F KMP++NV+SW+SMI
Sbjct: 361 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 420
Query: 433 NALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMINEYGI 492
NAL+MHG+A ALSLF +MK ENVEPN +TFVG+LY CSH GLVEEG++IF SM +EY I
Sbjct: 421 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 480
Query: 493 SPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELGEFAAK 552
+PK EH+GCMVDLFGRA LLREALEV+E+MP A N +IWGSLM+AC++HG+ ELG+FAAK
Sbjct: 481 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 540
Query: 553 QVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNEVHEFQ 612
++L+LEPDHDGALV++SNIYA+E+RWED +R++M E V KE+G SRI+ N + HEF
Sbjct: 541 RILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFL 600
Query: 613 MADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKLALCYA 672
+ D++HKQ++ IY KL+EVV LKLAGY P VLVD+++EEKK+LVLWHSEKLALC+
Sbjct: 601 IGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFG 660
Query: 673 LMNEGSR--------ICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCS 727
LMNE I I+KNLR+CEDCH F KL SKVY REI+VRDRTRFH Y++G CS
Sbjct: 661 LMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCS 720
BLAST of CmoCh06G014060 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 583.2 bits (1502), Expect = 2.9e-166
Identity = 296/732 (40.44%), Postives = 459/732 (62.70%), Query Frame = 0
Query: 12 PLQLPPYP--TKPNALS---------AALSSATSLLHIKQVHAQILRS-KFERSDSDSLL 71
PL LP +P + PN + + + SL +KQ H ++R+ F S S L
Sbjct: 9 PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68
Query: 72 FKLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGL 131
F +++ S SL+YA VFD+IP+P S N L+R + G +P +++ + M +E
Sbjct: 69 F--AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQ 128
Query: 132 SL-DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEAR 191
+++ FP L+KAA+ SL G +HG+A K GSD FV LI Y +C + A
Sbjct: 129 CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSAC 188
Query: 192 LVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAG 251
VF + ++DVV+W+ MI+G+ G D A +LF++M+ ++ + + +LSACA+
Sbjct: 189 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 248
Query: 252 NLDFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVS 311
NL+FG +V +I + + ++ L +A++ MY CGS + A L++ + K+ V T M+
Sbjct: 249 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 308
Query: 312 GLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-QLGMKPDVV 371
G A AR V + M +KD++ W+A+IS Y ++ P EAL++F ++Q Q MK + +
Sbjct: 309 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 368
Query: 372 TMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKM 431
T++S +SACA +GAL+ +WI Y+ K+G + +ALI MY+KCG LE +RE+F +
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 428
Query: 432 PKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQ 491
K++V W++MI LAMHG + A+ +F++M+ NV+PN +TF + ACSH GLV+E +
Sbjct: 429 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 488
Query: 492 RIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQL 551
+FH M + YGI P+ +H+ C+VD+ GR+ L +A++ +EAMP P+ +WG+L+ AC++
Sbjct: 489 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 548
Query: 552 HGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCS 611
H + L E A ++L+LEP +DGA V+LSNIYAK +WE+ E+RK M G+ KE GCS
Sbjct: 549 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 608
Query: 612 RIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELV 671
IE++ +HEF D H ++ +Y KL+EV++ LK GY P+ + VL +++EE KE
Sbjct: 609 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQS 668
Query: 672 L-WHSEKLALCYALMNEGSR--ICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHH 727
L HSEKLA+CY L++ + I +IKNLR+C DCH+ KL S++Y REI+VRDR RFHH
Sbjct: 669 LNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHH 728
BLAST of CmoCh06G014060 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 554.3 bits (1427), Expect = 1.5e-157
Identity = 292/750 (38.93%), Postives = 444/750 (59.20%), Query Frame = 0
Query: 16 PPYPTKPNALS-AALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLSP--- 75
PPY + N S + L + +L ++ +HAQ++ K +++ L KLI C LSP
Sbjct: 26 PPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMI--KIGLHNTNYALSKLI-EFCILSPHFE 85
Query: 76 SLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPLLK 135
L YA+SVF I EP N + R + S+P +AL +Y M + GL + + FP +LK
Sbjct: 86 GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 145
Query: 136 AASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQR---- 195
+ +++ + + G +IHG KLG D +V T LI MY R+ +A VFDK R
Sbjct: 146 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 205
Query: 196 ---------------------------DVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGL 255
DVV+W+ MI GY +G Y A +LF++M +T +
Sbjct: 206 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 265
Query: 256 EPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWD 315
PDE + T++SACA++G+++ G +VH +I + + +ALI +Y+ CG + A
Sbjct: 266 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 325
Query: 316 LYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEA 375
L+E++ KD+I W+ +I GYT + +EA
Sbjct: 326 LFERLP-------------------------------YKDVISWNTLIGGYTHMNLYKEA 385
Query: 376 LVLFKKMQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDK--NGFGKALSINNALI 435
L+LF++M + G P+ VTMLS++ ACAHLGA+D +WI +Y+DK G A S+ +LI
Sbjct: 386 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 445
Query: 436 DMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWI 495
DMYAKCG +E A ++F + K++ SW +MI AMHG A + LF +M+ ++P+ I
Sbjct: 446 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 505
Query: 496 TFVGLLYACSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEA 555
TFVGLL ACSH G+++ G+ IF +M +Y ++PK EH+GCM+DL G + L +EA E++
Sbjct: 506 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 565
Query: 556 MPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDA 615
M P+ +IW SL+ AC++HG+ ELGE A+ ++K+EP++ G+ V+LSNIYA RW +
Sbjct: 566 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 625
Query: 616 GEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYT 675
+ R L+N+ G+ K GCS IE+++ VHEF + D+ H + IY L E+ L+ AG+
Sbjct: 626 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 685
Query: 676 PQTNCVLVDLDDEEKKELVLWHSEKLALCYALMN--EGSRICIIKNLRICEDCHAFMKLA 727
P T+ VL ++++E K+ + HSEKLA+ + L++ G+++ I+KNLR+C +CH KL
Sbjct: 686 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLI 741
BLAST of CmoCh06G014060 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 521.9 bits (1343), Expect = 8.0e-148
Identity = 282/811 (34.77%), Postives = 438/811 (54.01%), Query Frame = 0
Query: 24 ALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLS--PSLDYALSVFD 83
A ++L + ++ +K H + + + + S + KL+ SC L SL +A VF+
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLD--NDVSTITKLVARSCELGTRESLSFAKEVFE 93
Query: 84 QIPEPKSRFC-NKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPLLKAASRNLSLR 143
+ F N L+R + A+ ++ +M G+S D++ FP L A +++ +
Sbjct: 94 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 153
Query: 144 TGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYC 203
G++IHGL K+G+ D FV+ L+ YA C + AR VFD+MS+R+VV+W+ MI GY
Sbjct: 154 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 213
Query: 204 ISGYYDLAFQLFEEMKR-TGLEPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDP 263
+ A LF M R + P+ + + ++SACA+ +L+ G KV+ FI I ++
Sbjct: 214 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 273
Query: 264 HLQSALIKMYASCGSTDLA----------------------------------------- 323
+ SAL+ MY C + D+A
Sbjct: 274 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 333
Query: 324 ---------------------------------------WD------------------- 383
WD
Sbjct: 334 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 393
Query: 384 --LYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQ 443
+++++S K +V ++V+G + G++ A F+ M EK+++ W+ +ISG + +
Sbjct: 394 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 453
Query: 444 EALVLFKKMQ-QLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNAL 503
EA+ +F MQ Q G+ D VTM+S+ SAC HLGALD AKWI Y++KNG + + L
Sbjct: 454 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 513
Query: 504 IDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNW 563
+DM+++CG E A IF + ++V +WT+ I A+AM G+A A+ LF M + ++P+
Sbjct: 514 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 573
Query: 564 ITFVGLLYACSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVE 623
+ FVG L ACSHGGLV++G+ IF+SM+ +G+SP+ H+GCMVDL GRA LL EA++++E
Sbjct: 574 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 633
Query: 624 AMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWED 683
MP PN +IW SL+AAC++ G+ E+ +AA+++ L P+ G+ V+LSN+YA RW D
Sbjct: 634 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 693
Query: 684 AGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGY 727
+VR M E G+ K G S I++ + HEF D H + I L+EV Q G+
Sbjct: 694 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 753
BLAST of CmoCh06G014060 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 517.7 bits (1332), Expect = 1.5e-146
Identity = 281/810 (34.69%), Postives = 437/810 (53.95%), Query Frame = 0
Query: 24 ALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCSLS--PSLDYALSVFD 83
A ++L + ++ +K H + + + + S + KL+ SC L SL +A VF+
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLD--NDVSTITKLVARSCELGTRESLSFAKEVFE 93
Query: 84 QIPEPKSRFC-NKLLRELSRGSEPENALFVYEKMRAEGLSLDRFCFPPLLKAASRNLSLR 143
+ F N L+R + A+ ++ +M G+S D++ FP L A +++ +
Sbjct: 94 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 153
Query: 144 TGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYC 203
G++IHGL K+G+ D FV+ L+ YA C + AR VFD+MS+R+VV+W+ MI GY
Sbjct: 154 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 213
Query: 204 ISGYYDLAFQLFEEMKR-TGLEPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDP 263
+ A LF M R + P+ + + ++SACA+ +L+ G KV+ FI I ++
Sbjct: 214 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 273
Query: 264 HLQSALIKMYASCGSTDLA----------------------------------------- 323
+ SAL+ MY C + D+A
Sbjct: 274 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 333
Query: 324 ---------------------------------------WD------------------- 383
WD
Sbjct: 334 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 393
Query: 384 --LYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQ 443
+++++S K +V ++V+G + G++ A F+ M EK+++ W+ +ISG + +
Sbjct: 394 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 453
Query: 444 EALVLFKKMQ-QLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNAL 503
EA+ +F MQ Q G+ D VTM+S+ SAC HLGALD AKWI Y++KNG + + L
Sbjct: 454 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 513
Query: 504 IDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNW 563
+DM+++CG E A IF + ++V +WT+ I A+AM G+A A+ LF M + ++P+
Sbjct: 514 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 573
Query: 564 ITFVGLLYACSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVE 623
+ FVG L ACSHGGLV++G+ IF+SM+ +G+SP+ H+GCMVDL GRA LL EA++++E
Sbjct: 574 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 633
Query: 624 AMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWED 683
MP PN +IW SL+AAC++ G+ E+ +AA+++ L P+ G+ V+LSN+YA RW D
Sbjct: 634 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 693
Query: 684 AGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGY 726
+VR M E G+ K G S I++ + HEF D H + I L+EV Q G+
Sbjct: 694 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 753
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| O23337 | 1.2e-244 | 57.52 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
| O82380 | 4.1e-165 | 40.44 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9LN01 | 2.1e-156 | 38.93 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| Q9LUJ2 | 1.1e-146 | 34.77 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
| Q9LTV8 | 2.6e-143 | 37.45 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1H7U5 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At4g14820 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1IE29 | 0.0e+00 | 98.07 | pentatricopeptide repeat-containing protein At4g14820-like OS=Cucurbita maxima O... | [more] |
| A0A6J1ICZ7 | 0.0e+00 | 96.48 | pentatricopeptide repeat-containing protein At4g14820-like isoform X2 OS=Cucurbi... | [more] |
| A0A6J1C8N9 | 0.0e+00 | 87.33 | pentatricopeptide repeat-containing protein At4g14820 OS=Momordica charantia OX=... | [more] |
| D7T700 | 9.2e-309 | 71.96 | DYW_deaminase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_05s002... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G14820.1 | 8.3e-246 | 57.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G29760.1 | 2.9e-166 | 40.44 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 1.5e-157 | 38.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G22690.2 | 8.0e-148 | 34.77 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
| AT3G22690.1 | 1.5e-146 | 34.69 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
