CmoCh06G013800 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G013800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	stem-specific protein TSJT1-like
Location	Cmo_Chr06: 10148048 .. 10150136 (-)
RNA-Seq Expression	CmoCh06G013800
Synteny	CmoCh06G013800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGCCGTCTTCGACAAATCGGTGGCCAAAAGTCCCGACGCTCTGCAGAGCCCTCACTCCGACTCCGTTTGGGCTCTCAAAGATGGAATTCTCGCCAAGCATTTTAGCTCTGTGTACCCTGACTCTGTCATTGTCAACCTCGGCTCCGCCGGTCTCTTGGCCTATTCCGTCGAGAAGAAAAACCCTCTCCTTCCGAGGTATTTTCATTACCTTTCTTCTTTTTCTTCATTTCTTTTGGGGAAAACCATAGCGTTCGTCTCTGTTTTTCTGATTGTTTCTTCATTTTTTATGTTTTTTTCTGGATCTGATTGCTGATCTCATTAAGCTTCTGTATTCCTGTGATTTCATCTGCAGTGTTTTTCGTTTTGGGTTGCTGAGATTCTGTTTGAACTTACAAGAATCGAGTTTTCCTTGTTTCTTTGATTTCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCATTCTTGGTTTTATCTGCAATCAGGGGTTTACTTATATGATATTATGTCGTTAATTTGTGTTCTTTGAGGCAACTATTGGCCATTTTTTGTTTTGCTTCAGATTTTCCATTTTGACTCGATCAAAATTTTGGAGGGTCAAATCTTTCCAGATCAATGTTTAGTTTATATAATTTTAAACTTATGGGATTCTTGGTTTGGCAAGATTCTTTTACACTTCATCAATCATCAATAACTTTTATGGGATTTGTGTCGAATCGTTGGGGTTTGTTTGGCTTCTTGATTCTTCGTTCTTGTAAGAGCATTTGTTAGATTTGGCTGCTGTTGGGAAATTGATGAAATTTTGTGTTTATAACCATAGATTATTCGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGTTGAAGCAACAATATGGATTGAACAAAGCTGCGAATGAGGTTATCATTGTTATCGAAGCGTATCGAACGTTAAGGGATCGGGGTCCATATCCAGCTGATCAGGTGGTGAGAGATATTCAAGGGAAATTTGTGTTTGTTCTATTTGACAGTTCCTCAAAAGCTGCATTTTTTGCTTCTGTAAGTTGTTGCCCTGATCCCTTAGTTTAACCATTGATTGCTGCAGATTTCTTGTGTTTTTAACCTATTTTGTGTCTTTTTAATTCTTAGGATGCTGATGGGAGTGTTCCTCTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTAGAAATTATGAAGAAGGGTTGTGGAAAGTCATTTGCTTCTTTCCCCAAAGGTAATTATTTAGGGGAATTGTGGGCATCTCTTCTGGTATCATATCATATTCTCAGATGGTTCTTTTGTTTATTATTCATTGATTTTTCTGCACTATGTTAGGTTGCTTCTTCACAACATCCGGTGGGTTGAGGAGTTTTGAGCATCCACTGAATGAGCTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCAATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCAGGCATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCTTCAAACTATTGA

mRNA sequence

ATGCTCGCCGTCTTCGACAAATCGGTGGCCAAAAGTCCCGACGCTCTGCAGAGCCCTCACTCCGACTCCGTTTGGGCTCTCAAAGATGGAATTCTCGCCAAGCATTTTAGCTCTGTGTACCCTGACTCTGTCATTGTCAACCTCGGCTCCGCCGGTCTCTTGGCCTATTCCGTCGAGAAGAAAAACCCTCTCCTTCCGAGGTATTTTCATTACCTTTCTTCTTTTTCTTCATTTCTTTTGGGGAAAACCATAGCATTATTCGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGTTGAAGCAACAATATGGATTGAACAAAGCTGCGAATGAGGTTATCATTGTTATCGAAGCGTATCGAACGTTAAGGGATCGGGGTCCATATCCAGCTGATCAGGTGGTGAGAGATATTCAAGGGAAATTTGTGTTTGTTCTATTTGACAGTTCCTCAAAAGCTGCATTTTTTGCTTCTGATGCTGATGGGAGTGTTCCTCTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTAGAAATTATGAAGAAGGGTTGTGGAAAGTCATTTGCTTCTTTCCCCAAAGGTTGCTTCTTCACAACATCCGGTGGGTTGAGGAGTTTTGAGCATCCACTGAATGAGCTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCAATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCAGGCATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCTTCAAACTATTGA

Coding sequence (CDS)

ATGCTCGCCGTCTTCGACAAATCGGTGGCCAAAAGTCCCGACGCTCTGCAGAGCCCTCACTCCGACTCCGTTTGGGCTCTCAAAGATGGAATTCTCGCCAAGCATTTTAGCTCTGTGTACCCTGACTCTGTCATTGTCAACCTCGGCTCCGCCGGTCTCTTGGCCTATTCCGTCGAGAAGAAAAACCCTCTCCTTCCGAGGTATTTTCATTACCTTTCTTCTTTTTCTTCATTTCTTTTGGGGAAAACCATAGCATTATTCGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGTTGAAGCAACAATATGGATTGAACAAAGCTGCGAATGAGGTTATCATTGTTATCGAAGCGTATCGAACGTTAAGGGATCGGGGTCCATATCCAGCTGATCAGGTGGTGAGAGATATTCAAGGGAAATTTGTGTTTGTTCTATTTGACAGTTCCTCAAAAGCTGCATTTTTTGCTTCTGATGCTGATGGGAGTGTTCCTCTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTAGAAATTATGAAGAAGGGTTGTGGAAAGTCATTTGCTTCTTTCCCCAAAGGTTGCTTCTTCACAACATCCGGTGGGTTGAGGAGTTTTGAGCATCCACTGAATGAGCTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCAATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCAGGCATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCTTCAAACTATTGA

Protein sequence

MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEKKNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRVGSAANWSSNY

Homology

[Close]

BLAST of CmoCh06G013800 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 60/166 (36.14%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHS--DSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSV 60
           MLAVF++S+ + P  L  P +      A     +A+ F +   DS   +L +   +A+S 
Sbjct: 1   MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSH 60

Query: 61  EKKNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAAN 120
             +NPL PR                     V+DD+FC+F G ++N   L++ YGL++ A 
Sbjct: 61  GNENPLQPR------------------SIVVMDDVFCIFSGALDNTFDLRKHYGLSRQAT 120

Query: 121 EVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFA 165
           E +I++EAY+ LRDR PYP DQV+++++GKF F+LFDS +   F A
Sbjct: 121 EAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148

[Close]

BLAST of CmoCh06G013800 vs. ExPASy Swiss-Prot
Match: P22106 (Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) OX=83333 GN=asnB PE=1 SV=3)

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-08
Identity = 35/126 (27.78%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 99  GHIENVAQLKQQYGLN---KAANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFD 158
           G I N   L+ +YG     +  ++  +++  Y   +++GP    + + D+QG F F L+D
Sbjct: 76  GEIYNHQALRAEYGDRYQFQTGSDCEVILALY---QEKGP----EFLDDLQGMFAFALYD 135

Query: 159 SSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCF-FTTSGG 218
           S   A     D  G +PL+ G D  GQL ++ +++ +   C ++   FP G + ++  G 
Sbjct: 136 SEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGE 193

Query: 219 LRSFEH 221
           +RS+ H
Sbjct: 196 IRSYYH 193

[Close]

BLAST of CmoCh06G013800 vs. ExPASy Swiss-Prot
Match: Q43011 (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 4.2e-06
Identity = 36/126 (28.57%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 99  GHIENVAQLKQQYGLNK--AANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDS 158
           G I N  +LK     +K   A++  ++   Y           ++ V  + G F FVL D+
Sbjct: 76  GEIYNHEELKANLKSHKFQTASDCEVIAHLYEEY-------GEEFVDMLDGMFAFVLLDT 135

Query: 159 SSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFFTT-SGGL 218
             K+   A DA G  PL+ G   +G +  S +++ +   C + F SFP G  +++ +GGL
Sbjct: 136 RDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDC-ERFISFPPGHLYSSKTGGL 193

Query: 219 RSFEHP 222
           R + +P
Sbjct: 196 RRWYNP 193

[Close]

BLAST of CmoCh06G013800 vs. ExPASy Swiss-Prot
Match: Q10MX3 (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0291500 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 35/133 (26.32%), Postives = 64/133 (48.12%), Query Frame = 0


Query: 93  IFCLFQGHIENVAQLKQQYGLN---KAANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKF 152
           I  +  G I N  ++++Q+         ++  ++I  Y           +  V  + G F
Sbjct: 70  IVVVANGEIYNHKKIRKQFASKHTFSTGSDCEVIIPLYEEY-------GEDFVDMLDGVF 129

Query: 153 VFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFF 212
            FVL+D+ +K    A DA G  PL+ G  S+G + +S +++ + + C   F  FP G  +
Sbjct: 130 AFVLYDTRTKTYMAARDAIGVNPLYIGRGSDGAVWISSEMKALNEDC-VEFEIFPPGHLY 189

Query: 213 TT-SGGLRSFEHP 222
           ++ +GGLR +  P
Sbjct: 190 SSAAGGLRRWYKP 194

[Close]

BLAST of CmoCh06G013800 vs. ExPASy Swiss-Prot
Match: Q9LV77 (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis thaliana OX=3702 GN=ASN2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.1e-05
Identity = 26/84 (30.95%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 139 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 198
           ++ +  + G F FVL D+  K+   A DA G  PL+ G   +G +  + +++ +   C +
Sbjct: 111 EEFIDMLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDC-E 170

Query: 199 SFASFPKGCFFTT-SGGLRSFEHP 222
            F SFP G  +++  GGLR + +P
Sbjct: 171 QFMSFPPGHIYSSKQGGLRRWYNP 193

[Close]

BLAST of CmoCh06G013800 vs. ExPASy TrEMBL
Match: A0A6J1IG81 (stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111473103 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 250/268 (93.28%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120
           KNPLLPR                  LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV
Sbjct: 61  KNPLLPR------------------LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120

Query: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180
           IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE
Sbjct: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180

Query: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240
           GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA
Sbjct: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240

Query: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 269
           NFKVDEEARKESSGMPRVGSAANWSSNY
Sbjct: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 250

[Close]

BLAST of CmoCh06G013800 vs. ExPASy TrEMBL
Match: A0A6J1G7B2 (stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111451479 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 250/268 (93.28%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120
           KNPLLPR                  LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV
Sbjct: 61  KNPLLPR------------------LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120

Query: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180
           IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE
Sbjct: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180

Query: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240
           GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA
Sbjct: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240

Query: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 269
           NFKVDEEARKESSGMPRVGSAANWSSNY
Sbjct: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 250

[Close]

BLAST of CmoCh06G013800 vs. ExPASy TrEMBL
Match: A0A6J1C8V4 (stem-specific protein TSJT1 OS=Momordica charantia OX=3673 GN=LOC111009449 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.7e-130
Identity = 235/268 (87.69%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAK+P+ALQSPHSDSVWALKDGIL +HF S+YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKTPEALQSPHSDSVWALKDGILGRHFGSLYPASVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120
           +NPLLPR                  LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV
Sbjct: 61  QNPLLPR------------------LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120

Query: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180
           IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVL+DSSSK AFFASDADGSVPLHWG+DSE
Sbjct: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLYDSSSKTAFFASDADGSVPLHWGSDSE 180

Query: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240
           G LVLSDD+E MKKGCGKSFA FPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA
Sbjct: 181 GHLVLSDDIETMKKGCGKSFAPFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240

Query: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 269
           NFKVDEEARKESSGMPRVGSAANWSSNY
Sbjct: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 250

[Close]

BLAST of CmoCh06G013800 vs. ExPASy TrEMBL
Match: A0A5D3CZ34 (Stem-specific protein TSJT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00820 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.3e-129
Identity = 235/268 (87.69%), Postives = 242/268 (90.30%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVF+KSVAKSPDALQSP SDS WALKDGILA+HFSS YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFEKSVAKSPDALQSPESDSTWALKDGILAQHFSSAYPGSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120
           +NPLLPR                  LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV
Sbjct: 61  QNPLLPR------------------LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120

Query: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180
           IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVL+DSSSK +FFASDADGSVP HWGTDSE
Sbjct: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLYDSSSKTSFFASDADGSVPFHWGTDSE 180

Query: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240
           GQLVLSDDVEIMKKGCGKSFA FPKGCFFTTSGGLRS+EHPLNELKPVPRVDSSG+VCGA
Sbjct: 181 GQLVLSDDVEIMKKGCGKSFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGA 240

Query: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 269
           NFKVD EARKESSGMPRVGSAANWSSNY
Sbjct: 241 NFKVDAEARKESSGMPRVGSAANWSSNY 250

[Close]

BLAST of CmoCh06G013800 vs. ExPASy TrEMBL
Match: A0A1S3AXH1 (stem-specific protein TSJT1 OS=Cucumis melo OX=3656 GN=LOC103483669 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.3e-129
Identity = 235/268 (87.69%), Postives = 242/268 (90.30%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVF+KSVAKSPDALQSP SDS WALKDGILA+HFSS YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFEKSVAKSPDALQSPESDSTWALKDGILAQHFSSAYPGSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120
           +NPLLPR                  LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV
Sbjct: 61  QNPLLPR------------------LFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120

Query: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180
           IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVL+DSSSK +FFASDADGSVP HWGTDSE
Sbjct: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLYDSSSKTSFFASDADGSVPFHWGTDSE 180

Query: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240
           GQLVLSDDVEIMKKGCGKSFA FPKGCFFTTSGGLRS+EHPLNELKPVPRVDSSG+VCGA
Sbjct: 181 GQLVLSDDVEIMKKGCGKSFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGA 240

Query: 241 NFKVDEEARKESSGMPRVGSAANWSSNY 269
           NFKVD EARKESSGMPRVGSAANWSSNY
Sbjct: 241 NFKVDAEARKESSGMPRVGSAANWSSNY 250

[Close]

BLAST of CmoCh06G013800 vs. TAIR 10
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 365.5 bits (937), Expect = 3.6e-101
Identity = 181/265 (68.30%), Postives = 206/265 (77.74%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLA+FDK+VAK+P+ALQ     SV ALKD  L  HFSSVYP +V +NLGS+G +A S+EK
Sbjct: 1   MLAIFDKNVAKTPEALQGQEGGSVCALKDRFLPNHFSSVYPGAVTINLGSSGFIACSLEK 60

Query: 61  KNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEV 120
           +NPLLPR                  LFAVVDD+FC+FQGHIENV  LKQQYGL K A EV
Sbjct: 61  QNPLLPR------------------LFAVVDDMFCIFQGHIENVPILKQQYGLTKTATEV 120

Query: 121 IIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSE 180
            IVIEAYRTLRDRGPY A+QVVRD QGKF F+L+D S++  F A D DGSVPL+WGTD+E
Sbjct: 121 TIVIEAYRTLRDRGPYSAEQVVRDFQGKFGFMLYDCSTQNVFLAGDVDGSVPLYWGTDAE 180

Query: 181 GQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGA 240
           G LV+SDDVE +KKGCGKSFA FPKGCFFT+SGGLRS+EHP NELKPVPRVDSSG VCG 
Sbjct: 181 GHLVVSDDVETVKKGCGKSFAPFPKGCFFTSSGGLRSYEHPSNELKPVPRVDSSGEVCGV 240

Query: 241 NFKVDEEARKESSGMPRVGSAANWS 266
            FKVD EA+KE+  MPRVGS  NWS
Sbjct: 241 TFKVDSEAKKEA--MPRVGSVQNWS 245

[Close]

BLAST of CmoCh06G013800 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 359.8 bits (922), Expect = 1.9e-99
Identity = 176/268 (65.67%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPH-SDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVE 60
           MLAVF+K+VA SP+ALQSPH S+S +ALKDG LA HF+SV P+SV +N GS+G +AYS++
Sbjct: 1   MLAVFEKTVANSPEALQSPHSSESAFALKDGSLATHFASVNPNSVTLNFGSSGFVAYSLD 60

Query: 61  KKNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANE 120
             +P +PR                  LFAVVDDIFCLFQGHIEN+  LKQQYGLNK  NE
Sbjct: 61  NPDPRVPR------------------LFAVVDDIFCLFQGHIENLPFLKQQYGLNKITNE 120

Query: 121 VIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDS 180
            IIVIEAYRTLRDRGPYP D+VVRD  GKF F+LFDS  K  F A+DADGSVP  WGTD+
Sbjct: 121 AIIVIEAYRTLRDRGPYPVDKVVRDFHGKFAFILFDSVKKTVFAAADADGSVPFFWGTDA 180

Query: 181 EGQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCG 240
           EG LV SD+ E++KKGC KS+  FPKGCFFT+SGGLRSFEHP NELKPVPRVDSSG VCG
Sbjct: 181 EGHLVFSDNTEMVKKGCAKSYGPFPKGCFFTSSGGLRSFEHPKNELKPVPRVDSSGDVCG 240

Query: 241 ANFKVDEEARKESSGMPRVGSAANWSSN 268
           A FKVD E ++E + MPRV S+ NW+ +
Sbjct: 241 ATFKVDAETKREGTKMPRVDSSQNWAGH 250

[Close]

BLAST of CmoCh06G013800 vs. TAIR 10
Match: AT4G27450.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 236.5 bits (602), Expect = 2.5e-62
Identity = 127/269 (47.21%), Postives = 171/269 (63.57%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVW---ALKDGILAKHFSSVYP-DSVIVNLGSAGLLAY 60
           MLA+F ++ A  P+ L SP S+       L +  L   F   YP ++  ++ G A +LA 
Sbjct: 1   MLAIFHEAFAHPPEELNSPASEKCSKQPKLPEETL-NDFLLRYPLNTFSMSFGQAAVLA- 60

Query: 61  SVEKKNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKA 120
                         Y+   +SF + +   LF   DDI+CLF G + N+ QL +QYGL K 
Sbjct: 61  --------------YVRPSASFSIHQ--RLFCGFDDIYCLFFGSLNNLCQLNKQYGLTKT 120

Query: 121 ANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWG 180
            NE + VIEAYRTLRDRGPYPADQVV+D+ G F FV++DS + + F A  +DG V L+WG
Sbjct: 121 TNEAMFVIEAYRTLRDRGPYPADQVVKDLDGSFSFVVYDSKAGSVFTALGSDGGVKLYWG 180

Query: 181 TDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGH 240
             ++G +V+SDD++++K+GC KSFA FP GC F + GGL SFEHP+N++K +PRVDS G 
Sbjct: 181 IAADGSVVISDDLDVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKIKAMPRVDSEGV 240

Query: 241 VCGANFKVDEEARKESSGMPRVGSAANWS 266
           +CGANFKVD   R  S  +PR GS ANWS
Sbjct: 241 LCGANFKVDVYNRVNS--IPRRGSEANWS 249

[Close]

BLAST of CmoCh06G013800 vs. TAIR 10
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 221.5 bits (563), Expect = 8.3e-58
Identity = 115/269 (42.75%), Postives = 165/269 (61.34%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSP---HSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYS 60
           MLA+F K+ A  P+ L SP    S     L    L+   S    ++  +N G + +LAY+
Sbjct: 1   MLAIFQKAFAHPPEELNSPASHFSGKTPKLPGETLSDFLSHHQNNAFSMNFGDSAVLAYA 60

Query: 61  VEKKNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLN-KA 120
             ++  L  R                  LF  +D I+C+F G + N+  L +QYGL+ K 
Sbjct: 61  -RQETSLRQR------------------LFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKN 120

Query: 121 ANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWG 180
           +NE + VIEAYRTLRDRGPYPADQV+R ++G F FV++D+ + + F A  +DG   L+WG
Sbjct: 121 SNEAMFVIEAYRTLRDRGPYPADQVLRGLEGSFAFVVYDTQTSSVFSALSSDGGESLYWG 180

Query: 181 TDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGH 240
              +G +V+SDD++I+K+GC KSFA FP GC F +  GL+SF+HP N +K +PR+DS G 
Sbjct: 181 ISGDGSVVMSDDIQIIKQGCAKSFAPFPNGCMFHSETGLKSFDHPTNMMKAMPRIDSEGV 240

Query: 241 VCGANFKVDEEARKESSGMPRVGSAANWS 266
           +CGA+FKVD  A  + + +PR GS ANW+
Sbjct: 241 LCGASFKVD--ACSKINSIPRRGSEANWA 248

[Close]

BLAST of CmoCh06G013800 vs. TAIR 10
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 208.4 bits (529), Expect = 7.3e-54
Identity = 109/247 (44.13%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDG-ILAKHFSSVYPDSVIVNLGSAGLLAYSVE 60
           ML +F  ++   P+ L +  S +      G  L   F    P +V V +G    LAYS  
Sbjct: 1   MLGIFSGAIVSPPEELVAAGSRTPSPKTTGSTLVNRFVEKNPSAVSVQVGDYVQLAYSHH 60

Query: 61  KKNPLLPRYFHYLSSFSSFLLGKTIALFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANE 120
            ++PL PR                   F   D+IFCLFQG ++N+  LKQQYGL K ANE
Sbjct: 61  NESPLRPR------------------SFGAKDEIFCLFQGSLDNLGSLKQQYGLAKNANE 120

Query: 121 VIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDS 180
           V++VIEAY+TLRDR PYPA+ VV  + G F FV+FD S+   F ASD  G VPL+WG  +
Sbjct: 121 VLLVIEAYKTLRDRAPYPANHVVAHLSGDFAFVVFDKSTSTLFVASDQVGKVPLYWGITA 180

Query: 181 EGQLVLSDDVEIMKKGCGKSFASFPKGCFFTTS-GGLRSFEHPLNELKPVPRVDSSGHVC 240
           +G +  +DDV+++K  CGKS ASFP+GC+++T+ GGLRSFE+P N++  VP   + G + 
Sbjct: 181 DGYVAFADDVDLLKGACGKSLASFPQGCYYSTALGGLRSFENPKNKITAVPA--NEGEIW 227

Query: 241 GANFKVD 246
           GA FKV+
Sbjct: 241 GATFKVE 227

The following BLAST results are available for this feature:

BLAST of CmoCh06G013800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24805	1.4e-25	36.14	Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1	[more]
P22106	4.5e-08	27.78	Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12)...	[more]
Q43011	4.2e-06	28.57	Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica ...	[more]
Q10MX3	1.6e-05	26.32	Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa subsp. japonica ...	[more]
Q9LV77	6.1e-05	30.95	Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh06G013800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG81	4.1e-137	93.28	stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111473103 PE=...	[more]
A0A6J1G7B2	4.1e-137	93.28	stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111451479 P...	[more]
A0A6J1C8V4	3.7e-130	87.69	stem-specific protein TSJT1 OS=Momordica charantia OX=3673 GN=LOC111009449 PE=4 ...	[more]
A0A5D3CZ34	5.3e-129	87.69	Stem-specific protein TSJT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AXH1	5.3e-129	87.69	stem-specific protein TSJT1 OS=Cucumis melo OX=3656 GN=LOC103483669 PE=4 SV=1	[more]

BLAST of CmoCh06G013800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22850.1	3.6e-101	68.30	Aluminium induced protein with YGL and LRDR motifs	[more]
AT5G43830.1	1.9e-99	65.67	Aluminium induced protein with YGL and LRDR motifs	[more]
AT4G27450.1	2.5e-62	47.21	Aluminium induced protein with YGL and LRDR motifs	[more]
AT3G15450.1	8.3e-58	42.75	Aluminium induced protein with YGL and LRDR motifs	[more]
AT5G19140.1	7.3e-54	44.13	Aluminium induced protein with YGL and LRDR motifs	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024286	Domain of unknown function DUF3700	SMART	SM01172	DUF3700_2	coord: 2..244 e-value: 5.2E-141 score: 484.4
IPR024286	Domain of unknown function DUF3700	PFAM	PF12481	DUF3700	coord: 2..244 e-value: 3.2E-104 score: 347.4
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 85..219 e-value: 1.9E-13 score: 52.1
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 91..212
None	No IPR available	PIRSR	PIRSR001589-2	PIRSR001589-2	coord: 95..208 e-value: 2.8E-6 score: 24.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..268
None	No IPR available	PANTHER	PTHR45952:SF4	ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS	coord: 1..268
None	No IPR available	CDD	cd01910	Wali7	coord: 2..244 e-value: 1.26362E-134 score: 377.42
IPR044828	Stem-specific protein TSJT1-like	PANTHER	PTHR45952	ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G013800.1	CmoCh06G013800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity