CmoCh06G013220 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G013220
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L14-2-like
LocationCmo_Chr06: 9874585 .. 9876727 (+)
RNA-Seq ExpressionCmoCh06G013220
SyntenyCmoCh06G013220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGGCTTCTTTTCCTTCGTATTTCTTCTCCTAACTACGAATCGGCAGCGCATGGTGGTGTTGTTTTCTTCATGAGTTTATCTTCTGCGGATTGTTTATGAATTTCGTGTTTTCTGAATTGTTTCTGTAGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGATTACGGAAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTATTACTTTTTAGTTTGAATTTGTATCAATCCCCTTGACATTCATAAGCCACGGAAAACGGAAGCTCTATGCTTCCCCTCTCCTTTGTTTCTTCTGAATTTGATGTTTGCGTTATGATCTAAACATATTAATATCATAAAATTCTGCTATTTATTATCTAGGAAAATTATTTCATAGCTTTTTCAAGTTTGAAGTGATAATTGTTGGAATAATATACAGCATTCCTTATTTAACTTTATGTTCATTTAGTAGGTCGCTAATTAGTGGTCATTCAATCAGTAGTTGGGTTGAGGATGATGCAAATTACTACTGATTGATGGTTAGCTTGAACTGTTTTCTCTGGGGTGTTTCGTTGGTTGTTCAAATTTATGGTTGTTTGATGCGCTGATGATTTTAATTGTTTTTGGGACTTCTCGTGAGTCTACAAATACAGATGTATGTCGCACTGGATGTTTGTAAACATTCATGCTTGTTTCAATGGATATATTCCATTTTTCTTTCCCTACTGAATTTGATTCTACAGTATCCAATTGTCTTTTGTAGACAAGAAAGGATTTGGATGGAATTGGCATATGCATGCATTTTATGTTGTCATTTCCTGGTGACTTGGGTTTAGTTTTTTTTTCAATATTTGACTAGTTGCTAACAACATGAGCATAGCTCAACTATTAAGTCGTTTTAACTTCCTCGGAGAGGTTGTAGGTTCGAATCCCTCCCTCCATGTGATATAACACTCGATTTTTTTTTATTAGTTGTTCATTCTATATATTTTTTCTAATGCCACTCTGTACAGGCTCTGGTGGATGCTCCTGATATGGTCAGGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACACTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGGTATGCTTTTCAACTGATTTCACTTTCAAATACCTAATTCTTCTACTACCACCCTCAATTGGGGTGTTGTTTTTGTTTGCCTCAAGTCTAACCCGTTGTTTCCGTCATGTCAGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGGTCAGTGATGATATGTGATGCGTCTGTACTTTCTCTTATTCCCCCCACCCTCTTTCTTTGGCATCGATAAGTATAAGAACTCTAAACCCGCTGTTCCTCTCGTGTTCTTGATTCATGGCAACCTATTCCTCAAATGGATATATATATATATTTTTTTTTGCAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGAAAACCATTTCTTTATCTTCAAATTTTGTTAGAGATCAATTTAAATGTTGTGGATTGTTCTCCCTTTTGCTTCTCAAGCACTTGAGAATTTGGGTTGCTTCTGAAGTGCATGGAGTTTTGGACATCCAAGTGTAGTGAGTACAACTGCATATGCCTTTTGTTTTCTATTTGTTTGTTTGTTTAATGTCTGCTTCACTTGCTTGAACTTTCATTTAGTAAGTAGTTCAAAAAGTATATGATTGCTACCAGATCTTAGTGCACTATCAAACCATTTTATCAAAAGCTTTTTTAAATCCTGTCCTCTGTGGACTGGTGTAGAACTCTGAGACATCTGCTTTGAGCGAACTTAGGTTAGAAATTTTGGTGGCTTCTCTACTTGCTGATTACGCTCGGGATCGAGAAAAACCCTAGTTACGAGCTTCAGTTATTTTCTGGTTATGCCCTGTAATGAGTGAATCAGCATCCTCTTCAATGGTGCGAAGTAGCAAAGGTGCAATCGTTTGAC

mRNA sequence

ATGGTGAGGCTTCTTTTCCTTCGTATTTCTTCTCCTAACTACGAATCGGCAGCGCATGGTGGTGTTCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGATTACGGAAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGCTCTGGTGGATGCTCCTGATATGGTCAGGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACACTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGAAAACCATTTCTTTATCTTCAAATTTTGTTAGAGATCAATTTAAATGTTGTGGATTGTTCTCCCTTTTGCTTCTCAAGCACTTGAGAATTTGGGTTGCTTCTGAAGTGCATGGAGTTTTGGACATCCAAGTGTAGTGAGTACAACTGCATATGCCTTTTGTTTTCTATTTGTTTGTTTGTTTAATGTCTGCTTCACTTGCTTGAACTTTCATTTAGTAAGTAGTTCAAAAAGTATATGATTGCTACCAGATCTTAGTGCACTATCAAACCATTTTATCAAAAGCTTTTTTAAATCCTGTCCTCTGTGGACTGGTGTAGAACTCTGAGACATCTGCTTTGAGCGAACTTAGGTTAGAAATTTTGGTGGCTTCTCTACTTGCTGATTACGCTCGGGATCGAGAAAAACCCTAGTTACGAGCTTCAGTTATTTTCTGGTTATGCCCTGTAATGAGTGAATCAGCATCCTCTTCAATGGTGCGAAGTAGCAAAGGTGCAATCGTTTGAC

Coding sequence (CDS)

ATGGTGAGGCTTCTTTTCCTTCGTATTTCTTCTCCTAACTACGAATCGGCAGCGCATGGTGGTGTTCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGATTACGGAAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGCTCTGGTGGATGCTCCTGATATGGTCAGGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACACTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAG

Protein sequence

MVRLLFLRISSPNYESAAHGGVPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Homology
[Close]
BLAST of CmoCh06G013220 vs. ExPASy Swiss-Prot
Match: Q9T043 (60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.4e-53
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 24  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDT 83
           FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI ID 
Sbjct: 3   FKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDI 62

Query: 84  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVR 143
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIK+AG+VR
Sbjct: 63  NRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVR 122

Query: 144 QELAKLKK 152
           QELAKLKK
Sbjct: 123 QELAKLKK 130

[Close]
BLAST of CmoCh06G013220 vs. ExPASy Swiss-Prot
Match: Q9SIM4 (60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-52
Identity = 107/128 (83.59%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 24  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDT 83
           FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI ID 
Sbjct: 3   FKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDI 62

Query: 84  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVR 143
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIKRAG+VR
Sbjct: 63  NRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVR 122

Query: 144 QELAKLKK 152
           QELAKLK+
Sbjct: 123 QELAKLKR 130

[Close]
BLAST of CmoCh06G013220 vs. ExPASy Swiss-Prot
Match: P55844 (Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.5e-52
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0 

Query: 22  VPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 81
           +PFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 82  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 141
           D KRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RA+LNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 142 VRQELAKLKKS 153
           VRQELAKLKK+
Sbjct: 121 VRQELAKLKKT 131

[Close]
BLAST of CmoCh06G013220 vs. ExPASy Swiss-Prot
Match: O46160 (60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 0 

Query: 24  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDIKI 83
           F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++K 
Sbjct: 3   FRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKA 62

Query: 84  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 143
                 +   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK  R  L
Sbjct: 63  KFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRL 122

Query: 144 VRQELAKLKKS 153
           ++ E  KL+K+
Sbjct: 123 IKIEFGKLRKA 133

[Close]
BLAST of CmoCh06G013220 vs. ExPASy Swiss-Prot
Match: Q7XYA7 (60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 64/130 (49.23%), Postives = 90/130 (69.23%), Query Frame = 0 

Query: 24  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDIKI 83
           F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT IK+
Sbjct: 3   FTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKV 62

Query: 84  -DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAG 143
            D  R     E+     AA V + +  S WG+KL  +++RA+L+DF RFK+M+A++K++ 
Sbjct: 63  DDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSK 122

Query: 144 LVRQELAKLK 151
            +  ELAKLK
Sbjct: 123 AINAELAKLK 132

[Close]
BLAST of CmoCh06G013220 vs. ExPASy TrEMBL
Match: A0A6J1G6K6 (60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451290 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.9e-63
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 22  VPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 81
           +PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 82  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 141
           DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 142 VRQELAKLKKSES 155
           VRQELAKLKKSES
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CmoCh06G013220 vs. ExPASy TrEMBL
Match: A0A6J1IGF2 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111473179 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 22  VPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 81
           +PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 82  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 141
           D KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 142 VRQELAKLKKSES 155
           VRQELAKLKKSES
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CmoCh06G013220 vs. ExPASy TrEMBL
Match: A0A6J1G6E8 (60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451284 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 22  VPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 81
           +PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 82  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 141
           D KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 142 VRQELAKLKKSES 155
           VRQELAKLKKSES
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CmoCh06G013220 vs. ExPASy TrEMBL
Match: A0A1S3AWM2 (60S ribosomal protein L14-1-like OS=Cucumis melo OX=3656 GN=LOC103483580 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 131/153 (85.62%), Postives = 139/153 (90.85%), Query Frame = 0 

Query: 2   VRLLFLRISSPNYESAAHGGVPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDA 61
           +RL  L  S     + +H  +PFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDA
Sbjct: 48  LRLYSLLSSLAPLRNPSHSNMPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDA 107

Query: 62  PDMVRSQMNFKRLSLTDIKIDTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA 121
           PDMVRSQMNFKRLSLTDIKID KRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA
Sbjct: 108 PDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRA 167

Query: 122 SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES 155
           +LNDFDRFKLMLAKIKRAGLVRQEL+KLKKS+S
Sbjct: 168 ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSQS 200

[Close]
BLAST of CmoCh06G013220 vs. ExPASy TrEMBL
Match: A0A6J1IT01 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111479102 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 22  VPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 81
           +PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 82  DTKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 141
           D KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 142 VRQELAKLKKSES 155
           VRQELAKL+KSES
Sbjct: 121 VRQELAKLRKSES 133

[Close]
BLAST of CmoCh06G013220 vs. TAIR 10
Match: AT4G27090.1 (Ribosomal protein L14 )

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-54
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 24  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDT 83
           FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI ID 
Sbjct: 3   FKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDI 62

Query: 84  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVR 143
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIK+AG+VR
Sbjct: 63  NRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVR 122

Query: 144 QELAKLKK 152
           QELAKLKK
Sbjct: 123 QELAKLKK 130

[Close]
BLAST of CmoCh06G013220 vs. TAIR 10
Match: AT2G20450.1 (Ribosomal protein L14 )

HSP 1 Score: 207.2 bits (526), Expect = 9.3e-54
Identity = 107/128 (83.59%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 24  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDT 83
           FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI ID 
Sbjct: 3   FKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDI 62

Query: 84  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVR 143
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIKRAG+VR
Sbjct: 63  NRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVR 122

Query: 144 QELAKLKK 152
           QELAKLK+
Sbjct: 123 QELAKLKR 130

The following BLAST results are available for this feature:
BLAST of CmoCh06G013220 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0433.4e-5384.3860S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1[more]
Q9SIM41.3e-5283.5960S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1[more]
P558446.5e-5279.39Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
O461602.0e-2448.8560S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1[more]
Q7XYA79.8e-2449.2360S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1[more]
BLAST of CmoCh06G013220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G6K62.9e-6399.2560S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451290 P... [more]
A0A6J1IGF21.4e-6298.5060S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111473179 PE=... [more]
A0A6J1G6E81.4e-6298.5060S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451284 P... [more]
A0A1S3AWM21.4e-6285.6260S ribosomal protein L14-1-like OS=Cucumis melo OX=3656 GN=LOC103483580 PE=3 SV... [more]
A0A6J1IT013.2e-6297.7460S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111479102 PE=... [more]
BLAST of CmoCh06G013220 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27090.12.4e-5484.38Ribosomal protein L14 [more]
AT2G20450.19.3e-5483.59Ribosomal protein L14 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 66..138
e-value: 1.6E-24
score: 86.2
NoneNo IPR availableGENE3D6.10.250.2270coord: 113..148
e-value: 1.2E-11
score: 46.2
NoneNo IPR availablePANTHERPTHR11127:SF11RIBOSOMAL PROTEIN L14, PUTATIVE-RELATEDcoord: 22..152
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 22..105
e-value: 4.5E-37
score: 128.1
IPR039660Ribosomal protein L14PANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 22..152
IPR041985Ribosomal protein L14, KOW motifCDDcd06088KOW_RPL14coord: 28..100
e-value: 2.14078E-21
score: 80.2122
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 26..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G013220.1CmoCh06G013220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome