CmoCh06G012330 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAACTAGGCAAGAAGCGGGTGGAGCGAAGTCAATCTCGAAGAACCTCACCTGTCGATTACTCACCAAAAGCTCACCTTCCTCTGCGTAATCTTCATCTCTAAATCTCCTTTTCAGCACCACTTTCGGTGATCGATTCACATCCTGATCCGCCGTTGTTCACCGTTAATGGAGGCAGCTGCTGGCGGCGGAGGCACTGGCGGTGCTGGTCCAGCGCCGTTTCTCATCAAGACCTACGATATGGTCGATGAATCTGCCACCGACGAGATCGTCTCGTGGACTTCTTCGAAGAAGAGCTTTGTGGTTTGGAATCCCCCTGAATTCGCTCGCCTTCTTCTTCCTACGTTTTTCAAGCACAACAACTTCTCCAGCTTCATTCGGCAGCTTAATACCTATGTAAGTTACTGGAGATTCCTCTTCCGTTTACTTCTTAGTTTTGATTTTTCGCGTTTCGGTGATTTGATTTTGTTCCTCTTGTTAACTGGCTATGGAGTAGTTCCTTATCGTGTAATCATGACTTCAGTTACTGTTTTTTTCTCTCTCTCTCTCATTTACATAGTATGCATATTCGTTTCAGCAATTCTTAATGTTTCCATATTTATGAGCTTCAATTGCTGTAACTCGTAGGGATTTAACTGTGTCATAAACTAAATTTGGTCTGTTTATGCTAATCTAGTATGCAATCTCCTAGCTTCGAGATTCTTATATCTTCGACTTCTTAGAACTGTTTTCTGCGTGGAATTTTCTACGCTCTCTCTCTAGTTGAGCAACCTACTTGAAAATAATTTTCTCTTCTCCTTGCAATTCCAATTTATTAATACGTGATTCTTGAACTCATAAAAGAATCGTCCCTTGGCTGGAAGTAGTTTGAAGGGTTCCTTTATGGTTTGCTTACCGCCGTATGAATCATTTATGTGCTTGTATGATCTTTCCATCTATCATGCTAGAATCTCTTGAATAATTGTTGCTGTTCACCTCATTTTATAAGAAAACTAAATCACTCTTTCGTTTTGAAAAATTGAAGTGATTACGGCATTAAAAAGTTGCTTAAACATGCAATTTTTGAACATTTTGTTTGCAGGGGTTTAAGAAGATTGATTCTGAGAGGTGGGAATTTGCAAATGATGATTTCATAAAGGATCAAAAGCATCTGCTGAAGAACATCCACCGTCGAAAACCAATTCATAGTCACAGTACTCCTCCAGGATCTCTTGGAGATCCAGAAAGAGCTGCTTTTGAAGATGAAATAGATAGGCTATCCCGTAAAAAAACTACACTTGAAGCCGATATCTCTAGGTTCAAACAGCAAAAATCGACTGCTAAAATTCAGTTGCAGGATCTAACGGTGAAGGTGGAAAGCATGGAAAAAAGGCAGAAGAATTTATTGGCGTTTTTAGAAAAGGCTGTTCAGAACCCTTCTTTCGTTGAGCATCTTGCTCGGAGAGTCGAGTCTATGGACTTTACAGCATTTAACAAAAAGAGACGATTGCCTTCAGCTGATCATTCACAGCCAGTCCTTGAAAATAGTTTTTTGGATAACCATAGCAGTTCCAGATCTGGGTCTGGGAATATTTTTCATCAAGATTTCTCACATAAGACGAGATTAGAAACTTCGAGCGTATCGGATATTAACTTACTTTCATGTAGCACTCAGAGTTCAAATGAAGGAGGGGGAAGTTCACAAAGAAACATGTCAAAACTTGACACTAGAGGTGTCCAAGAAAGTCATCATTTTGCAGCTGAAACATTAGATCTTTCAGACACTGGGACATCATTTGTATTGAAGAGGGATTCATCTTTGTCGGGGAAATCGCCTAACGACGAGAGTCCATGTCTGCACTCACTGCAACCAAATGTTAGTTCCAAAGAAGATGGAGAGAGTCACATTTCCTGTCATTTAAATCTCACTCTTGCATCTTCTTCCCTGCGAGTCAACGACGCTGATTGTTCGGTTAGAATGCCACAACTGAGTCAGAATCTTCGAAAATCCTCAGGTTCGAAAGTAAATTCAAATGGAAAAGAATCAGACATGAGACTGTTCACTAAAAACATAAATCTCGATGAGGGAACCACTACGCTTTGTCTCAAAGAGACCTCAAGTAACAATCATGGACCTCCAGCCAACCCCGTAAGAGTCAATGATGTTTTCTGGGAACAGTTTCTTACCGAAAGACCAGGTTGTCCCGAAAGTGAAGAGGCAAGTTCTAATTACAGGGAAAATCTATACAAGGAGCCAGACGACGGGAGATCGGGCCTATCACTTTAACCAGAGAGGTAATTCCAAAGCTTTTCTCACAGTTTATTTAGATTTCTCTTTCTAATTTAGACATTCAGTTATACAATAAGTGAATTCTGAAATAGGATTTGCAGTTTCTTTTTATAGTCACTATGTGATTTGTCGAGTTACTCGTATGTCGTTACAACGAGTTCTTCCTTGTACATTACAACAGTGTATAATGTTATTCATTCATGAACGATTAGCTAGTTAAATCTACACCTTATTAAAGATCTTATCTTACCATGAATACTTCATCTGTGCTTGATGGAAATATTGCTAATGAACACACTCATAAATGAATTTATGCTGAGTTGCTTCTCCATTTGGGCATGGAGAGTGCATTGTCTATTGAATAAATTGTCTTTGAGCCTTGTCTTTGTTCATTTACTTTTTAGATATCTGTGAAGTAAAACTCATGAAACTCGTGCAGTATTAAATCTTGAATAGGTGGCTACACGACTCGAGTCCATTTTCTCTAGATCTTTCTCTATTTACATCTACACTCATGTACCATTAGATCAACCTCGGGTAGTTTTTTTTGTCTTTGCTCATTCTAGTTCTGTTTCTTTATCGAATAAAACATACTATTACTTAGTTCATTACGAATCTATTCAACTTGATGAATGATAGGAGGGCGGTGTTTATTTCTATTATCGTGAATACAACTATAGAAATTTATATACTCAAGTTGTTAGGATCAGCAACATGTTAGAATTTGATAGAATTTCAATATGATCAATTACCAATATTGAAAATATTTTATGGATAATTCAATTTTAATTTCTCCTGTGGTTGTGATTGATTACAGCTGCCTGTTTATGAACCAAATGGGAAACAGCCACAGGTTGAAAATGATAGCTGACCCTACCAAAAGAGAAACAAACTCCAATCCCTGCACCTGTTCTTCCTGTGAGTTATGCTATGTTTCTATACAAATTGGATTCTTTTTTGTTTTGTTTAAATATTTTTTTAATTATAATTGGGGGAAAAAAATGAAGAGACTATGAACTCTTTCTTGTTCTATGGGGTATGTGTTTTAAGAGAGAAATATGAAGGATTGGGCCATTGGTTTTGTATGACTAAAAGTGCTTTTTAGAGGGGAATATATTGTATGGATCGAACAAAACGTGGTTTGGATAGATTTCTTTTATAAGAATAAGTTCCAACGGCTCGAGTTTATCTTAATATAGCTACGACAAC AAAAAAAACTAGGCAAGAAGCGGGTGGAGCGAAGTCAATCTCGAAGAACCTCACCTGTCGATTACTCACCAAAAGCTCACCTTCCTCTGCGTAATCTTCATCTCTAAATCTCCTTTTCAGCACCACTTTCGGTGATCGATTCACATCCTGATCCGCCGTTGTTCACCGTTAATGGAGGCAGCTGCTGGCGGCGGAGGCACTGGCGGTGCTGGTCCAGCGCCGTTTCTCATCAAGACCTACGATATGGTCGATGAATCTGCCACCGACGAGATCGTCTCGTGGACTTCTTCGAAGAAGAGCTTTGTGGTTTGGAATCCCCCTGAATTCGCTCGCCTTCTTCTTCCTACGTTTTTCAAGCACAACAACTTCTCCAGCTTCATTCGGCAGCTTAATACCTATGGGTTTAAGAAGATTGATTCTGAGAGGTGGGAATTTGCAAATGATGATTTCATAAAGGATCAAAAGCATCTGCTGAAGAACATCCACCGTCGAAAACCAATTCATAGTCACAGTACTCCTCCAGGATCTCTTGGAGATCCAGAAAGAGCTGCTTTTGAAGATGAAATAGATAGGCTATCCCGTAAAAAAACTACACTTGAAGCCGATATCTCTAGGTTCAAACAGCAAAAATCGACTGCTAAAATTCAGTTGCAGGATCTAACGGTGAAGGTGGAAAGCATGGAAAAAAGGCAGAAGAATTTATTGGCGTTTTTAGAAAAGGCTGTTCAGAACCCTTCTTTCGTTGAGCATCTTGCTCGGAGAGTCGAGTCTATGGACTTTACAGCATTTAACAAAAAGAGACGATTGCCTTCAGCTGATCATTCACAGCCAGTCCTTGAAAATAGTTTTTTGGATAACCATAGCAGTTCCAGATCTGGGTCTGGGAATATTTTTCATCAAGATTTCTCACATAAGACGAGATTAGAAACTTCGAGCGTATCGGATATTAACTTACTTTCATGTAGCACTCAGAGTTCAAATGAAGGAGGGGGAAGTTCACAAAGAAACATGTCAAAACTTGACACTAGAGGTGTCCAAGAAAGTCATCATTTTGCAGCTGAAACATTAGATCTTTCAGACACTGGGACATCATTTGTATTGAAGAGGGATTCATCTTTGTCGGGGAAATCGCCTAACGACGAGAGTCCATGTCTGCACTCACTGCAACCAAATGTTAGTTCCAAAGAAGATGGAGAGAGTCACATTTCCTGTCATTTAAATCTCACTCTTGCATCTTCTTCCCTGCGAGTCAACGACGCTGATTGTTCGGTTAGAATGCCACAACTGAGTCAGAATCTTCGAAAATCCTCAGGTTCGAAAGTAAATTCAAATGGAAAAGAATCAGACATGAGACTGTTCACTAAAAACATAAATCTCGATGAGGGAACCACTACGCTTTGTCTCAAAGAGACCTCAAGTAACAATCATGGACCTCCAGCCAACCCCGTAAGAGTCAATGATGTTTTCTGGGAACAGTTTCTTACCGAAAGACCAGGTTGTCCCGAAAGTGAAGAGGCAAGTTCTAATTACAGGGAAAATCTATACAAGGAGCCAGACGACGGGAGATCGGGCCTATCACTTTAACCAGAGAGCTGCCTGTTTATGAACCAAATGGGAAACAGCCACAGGTTGAAAATGATAGCTGACCCTACCAAAAGAGAAACAAACTCCAATCCCTGCACCTGTTCTTCCTGTGAGTTATGCTATGTTTCTATACAAATTGGATTCTTTTTTGTTTTGTTTAAATATTTTTTTAATTATAATTGGGGGAAAAAAATGAAGAGACTATGAACTCTTTCTTGTTCTATGGGGTATGTGTTTTAAGAGAGAAATATGAAGGATTGGGCCATTGGTTTTGTATGACTAAAAGTGCTTTTTAGAGGGGAATATATTGTATGGATCGAACAAAACGTGGTTTGGATAGATTTCTTTTATAAGAATAAGTTCCAACGGCTCGAGTTTATCTTAATATAGCTACGACAAC ATGGAGGCAGCTGCTGGCGGCGGAGGCACTGGCGGTGCTGGTCCAGCGCCGTTTCTCATCAAGACCTACGATATGGTCGATGAATCTGCCACCGACGAGATCGTCTCGTGGACTTCTTCGAAGAAGAGCTTTGTGGTTTGGAATCCCCCTGAATTCGCTCGCCTTCTTCTTCCTACGTTTTTCAAGCACAACAACTTCTCCAGCTTCATTCGGCAGCTTAATACCTATGGGTTTAAGAAGATTGATTCTGAGAGGTGGGAATTTGCAAATGATGATTTCATAAAGGATCAAAAGCATCTGCTGAAGAACATCCACCGTCGAAAACCAATTCATAGTCACAGTACTCCTCCAGGATCTCTTGGAGATCCAGAAAGAGCTGCTTTTGAAGATGAAATAGATAGGCTATCCCGTAAAAAAACTACACTTGAAGCCGATATCTCTAGGTTCAAACAGCAAAAATCGACTGCTAAAATTCAGTTGCAGGATCTAACGGTGAAGGTGGAAAGCATGGAAAAAAGGCAGAAGAATTTATTGGCGTTTTTAGAAAAGGCTGTTCAGAACCCTTCTTTCGTTGAGCATCTTGCTCGGAGAGTCGAGTCTATGGACTTTACAGCATTTAACAAAAAGAGACGATTGCCTTCAGCTGATCATTCACAGCCAGTCCTTGAAAATAGTTTTTTGGATAACCATAGCAGTTCCAGATCTGGGTCTGGGAATATTTTTCATCAAGATTTCTCACATAAGACGAGATTAGAAACTTCGAGCGTATCGGATATTAACTTACTTTCATGTAGCACTCAGAGTTCAAATGAAGGAGGGGGAAGTTCACAAAGAAACATGTCAAAACTTGACACTAGAGGTGTCCAAGAAAGTCATCATTTTGCAGCTGAAACATTAGATCTTTCAGACACTGGGACATCATTTGTATTGAAGAGGGATTCATCTTTGTCGGGGAAATCGCCTAACGACGAGAGTCCATGTCTGCACTCACTGCAACCAAATGTTAGTTCCAAAGAAGATGGAGAGAGTCACATTTCCTGTCATTTAAATCTCACTCTTGCATCTTCTTCCCTGCGAGTCAACGACGCTGATTGTTCGGTTAGAATGCCACAACTGAGTCAGAATCTTCGAAAATCCTCAGGTTCGAAAGTAAATTCAAATGGAAAAGAATCAGACATGAGACTGTTCACTAAAAACATAAATCTCGATGAGGGAACCACTACGCTTTGTCTCAAAGAGACCTCAAGTAACAATCATGGACCTCCAGCCAACCCCGTAAGAGTCAATGATGTTTTCTGGGAACAGTTTCTTACCGAAAGACCAGGTTGTCCCGAAAGTGAAGAGGCAAGTTCTAATTACAGGGAAAATCTATACAAGGAGCCAGACGACGGGAGATCGGGCCTATCACTTTAA MEAAAGGGGTGGAGPAPFLIKTYDMVDESATDEIVSWTSSKKSFVVWNPPEFARLLLPTFFKHNNFSSFIRQLNTYGFKKIDSERWEFANDDFIKDQKHLLKNIHRRKPIHSHSTPPGSLGDPERAAFEDEIDRLSRKKTTLEADISRFKQQKSTAKIQLQDLTVKVESMEKRQKNLLAFLEKAVQNPSFVEHLARRVESMDFTAFNKKRRLPSADHSQPVLENSFLDNHSSSRSGSGNIFHQDFSHKTRLETSSVSDINLLSCSTQSSNEGGGSSQRNMSKLDTRGVQESHHFAAETLDLSDTGTSFVLKRDSSLSGKSPNDESPCLHSLQPNVSSKEDGESHISCHLNLTLASSSLRVNDADCSVRMPQLSQNLRKSSGSKVNSNGKESDMRLFTKNINLDEGTTTLCLKETSSNNHGPPANPVRVNDVFWEQFLTERPGCPESEEASSNYRENLYKEPDDGRSGLSL Homology
BLAST of CmoCh06G012330 vs. ExPASy Swiss-Prot
Match: Q94BZ5 (Heat stress transcription factor A-5 OS=Arabidopsis thaliana OX=3702 GN=HSFA5 PE=2 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-115 Identity = 241/470 (51.28%), Postives = 317/470 (67.45%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy Swiss-Prot
Match: Q6K6S5 (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA5 PE=2 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 5.0e-95 Identity = 227/483 (47.00%), Postives = 295/483 (61.08%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy Swiss-Prot
Match: Q93VB5 (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA4D PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.3e-55 Identity = 171/476 (35.92%), Postives = 247/476 (51.89%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy Swiss-Prot
Match: O49403 (Heat stress transcription factor A-4a OS=Arabidopsis thaliana OX=3702 GN=HSFA4A PE=1 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.8e-52 Identity = 122/293 (41.64%), Postives = 178/293 (60.75%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy Swiss-Prot
Match: P41153 (Heat shock factor protein HSF8 OS=Solanum peruvianum OX=4082 GN=HSF8 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 5.8e-51 Identity = 112/256 (43.75%), Postives = 157/256 (61.33%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy TrEMBL
Match: A0A6J1G983 (heat stress transcription factor A-5-like OS=Cucurbita moschata OX=3662 GN=LOC111452123 PE=3 SV=1) HSP 1 Score: 921.4 bits (2380), Expect = 1.5e-264 Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy TrEMBL
Match: A0A6J1IB49 (heat stress transcription factor A-5-like OS=Cucurbita maxima OX=3661 GN=LOC111473483 PE=3 SV=1) HSP 1 Score: 890.6 bits (2300), Expect = 2.9e-255 Identity = 457/470 (97.23%), Postives = 461/470 (98.09%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy TrEMBL
Match: A0A0A0L9B5 (HSF_DOMAIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129630 PE=3 SV=1) HSP 1 Score: 781.6 bits (2017), Expect = 1.9e-222 Identity = 399/464 (85.99%), Postives = 428/464 (92.24%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy TrEMBL
Match: A0A1S3AWR2 (heat stress transcription factor A-5 OS=Cucumis melo OX=3656 GN=LOC103483459 PE=3 SV=1) HSP 1 Score: 778.5 bits (2009), Expect = 1.6e-221 Identity = 398/464 (85.78%), Postives = 427/464 (92.03%), Query Frame = 0
BLAST of CmoCh06G012330 vs. ExPASy TrEMBL
Match: A0A6J1CYL3 (heat stress transcription factor A-5 OS=Momordica charantia OX=3673 GN=LOC111015981 PE=3 SV=1) HSP 1 Score: 776.5 bits (2004), Expect = 6.1e-221 Identity = 404/474 (85.23%), Postives = 428/474 (90.30%), Query Frame = 0
BLAST of CmoCh06G012330 vs. TAIR 10
Match: AT4G13980.1 (winged-helix DNA-binding transcription factor family protein ) HSP 1 Score: 418.3 bits (1074), Expect = 8.1e-117 Identity = 241/470 (51.28%), Postives = 317/470 (67.45%), Query Frame = 0
BLAST of CmoCh06G012330 vs. TAIR 10
Match: AT4G18880.1 (heat shock transcription factor A4A ) HSP 1 Score: 208.4 bits (529), Expect = 1.3e-53 Identity = 122/293 (41.64%), Postives = 178/293 (60.75%), Query Frame = 0
BLAST of CmoCh06G012330 vs. TAIR 10
Match: AT4G17750.1 (heat shock factor 1 ) HSP 1 Score: 199.5 bits (506), Expect = 5.9e-51 Identity = 105/218 (48.17%), Postives = 143/218 (65.60%), Query Frame = 0
BLAST of CmoCh06G012330 vs. TAIR 10
Match: AT5G16820.1 (heat shock factor 3 ) HSP 1 Score: 193.4 bits (490), Expect = 4.2e-49 Identity = 115/286 (40.21%), Postives = 167/286 (58.39%), Query Frame = 0
BLAST of CmoCh06G012330 vs. TAIR 10
Match: AT5G16820.2 (heat shock factor 3 ) HSP 1 Score: 193.4 bits (490), Expect = 4.2e-49 Identity = 115/286 (40.21%), Postives = 167/286 (58.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|