CmoCh06G012310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G012310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nucleolin-like
Location	Cmo_Chr06: 9319095 .. 9325047 (-)
RNA-Seq Expression	CmoCh06G012310
Synteny	CmoCh06G012310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATATTCTCAATTTTCTATCCATCTTCTAGGGTTTCGTTTTTTCTTTCGAATATCAATTTCTTCTCTAATCGCTCGTTTTTCCGAAAAAAATTTCGTATTTCCACCACCTGATTTGCAACTCTCAGATTTTCTAGGGTTGTTTCTTCGTCAACGCTTCAGATCCTTTGAAGTTGTTGAGATGCCTCCAAGGACGGTAAAGAGAGGGGCGGCATCAGCCGGATCGAAGAGAGGTGGAAGGGTCACAAGAGGGACACCGAATAAGAAACAACAGCCGCCGGAACGGGAGGTTGCCGAAGAGACGGTGAAGGTCGAGGAGGTCTCGGTGGTTGAGGTGGAAACCAAGGAGATTCCCGAGGAAGTAACGGTGCAGGAAAAAAGCCCTGTTGTCGAAGACGAGCCAGTCATTCCGAATATGCCGGTAGTTGTCGAAGATGAGCCAGTCATTCTGAATAATCTGGTAGTTGTCGAGGAGAAGCCACCTGTTGCCATAGACGTTGAGGAGGTCGAACCTTCGCACGAAGTCGGATCGGATTCTAAACCCTTGGTTCCTCCTAAAAGTAAGTATTATCTTCCAAATTCGAGACGTCTCCATTAGGGCAAGAATACTAATTCTAATTGATGGGTAAATACTAATTCTATTTGTCTGGTATTCGACGGTGGAATTCGTGACTGATAAGTGTAGTTCGTACTTGAGACATGACCTTGCCTTTTGCATTATATTTTTCACTGTCTTTTTTTTTTCTCAAGATCCTGAAATAGATGGATGTAATTACATGACGAAAAAAGTTCTAGTTTATCTGTGATTTTTTTTGTAAAATTTTCTTTTGAGGTTAGATATGTGATGCTCTCGATTGTCTTAGAGCAGTGCGTACTTGGGTACAATCTAATTATTTTTTTACCCTCTTTACCTTAGCTCATATTACTGAGGTTGTATTGGTATAGTGAGTGTGGGTATGCTTGTCTAGAAGCTGGACATATTTAGATGCCAAGTTTAGCTATGCTTTGGGTTTTAATTTTTAATGTATCCAGTGTATTACTTGAGTGAGTTGTTGACCGGGATAGATCTTCAATGTACATCTCGTTTCAGAAGAAGTAAAGGATGAAGAATTTGGAAAGGATGAACGCTTGGATCTTGAAGACAATGATCCTGAATCAGAACCTGAGGAGGAGTTTGATGAAAAAGAAATTGGACAAGCGGATGTTCAGGACATGGTATATGGAGAGGGTGAACCTGAGGACAATGTGGGCGATGGGGAGGGTGTTATGGGGGTAGATGATGTTGAGGATGTTCAGGAGGATCATGAGGGAGAGGAGGATGATCAGCAAGTTGCTGAAGGCCATGAGCATGCTGGCATGGTTGATGCTGATGAGGATGAGCATCATGAAGTTGTAGAGGAGAGGCGTAAGCGCAAAGAATTTGAAGTGTTTGTTGGGGGCTTGGACAAGGATGTAAAGGAGGAGGATTTAAAGAAAGTTTTCAGTGCAGTTGGTGAAGTTACTGAAGTCAGGCTAATGATGAACCCTCAGACGAAGAAGAATAAAGGTTTTGCATTTTTACGTTTTGCTACAGTTGAAGAGGCAAAACGTGCTGTGTCAGAGCTAAAGAATCCAGTGGTAATTTTGGCCCTTTAATCATTTCCTCTTTTTTTAGGATGATGAAATTGATAAGACTTTGATATACCACCTCCAGCTTATTTTATTTAAATTAATGAAATTCCAGATTAATGGGAAACAATGTGGTGTGACTCCAAGTCAAGACAGTGACACCCTTTTTCTTGGTAACATATGCAAGACATGGAAAAAGGATGTTGTAAGTTGTGGATTTTTCACATTCTATTGATCAGTGAGTTTTTTTTTTGTACACGAGTTGTAAATTTCCTGACACTATGATATTCCTATATATGGATCCAGCTGAAGGAGAAGTTGAAACATTATGGAGTTGATAATGTTGAGGATCTGACTTTGGTAGAAGATAGTAATAATGAAGGATTAAATCGTGGATTTGCTTTTTTGGAATTTTCATCTCGCTTAGATGCCATGGATGCCTTCAAGCGTCTTCAAAAAAGGGATGTTGTATTTGGAGTCGATAGACCTGCCAAAGTGTCTTTTGCAGATTCTTTTATAGATCCTGGTGATGAAATTATGGCCCAGGTTAGCATTGAGATAACTATTTGACATTATTCAATTGAAGTGCTGTGTAATTAATTTTTCTGGTGAATTAACCTATTGGAATTAAATTATTGTTACTACCCACACTGTTTTAAGCTTGTAGAGGTCAGAAATTATCTTTTGATGAAGTATTCAACATTTCTTTCTTTTAGTATGTACGTTGTTTAGCTACTGTGTTCCAATATATATGATTTTATTGTCTAATACCTGTTTATTATTTTGTAAATTTTTTTCTGCAAGTGTTCCTCATGTTCAGTCGGCTGGATGTGTGTCTTTCATGCATTCTGGTTCATCTTTTCATCCGTCATCGTATGTAGTTGATATGTAGCTATCATTTTCACACTGTTTCTGTTAGAATGCAATGATATGCAATTGTTATTGTGTCACACAAACAGGTCAAGACTGTTTTTGTTGATAGTCTCCCTGGCTCATGGGATGAGGTATTTGTTCGAGGACTTCTTAAGAAGTATGGGGAGATTGAAAAAATTGAGCTTGCCCGAAATATGCCTTCAGCAAAGAGAAAGGACTTTGGTTTTGTTACATTTGACACACATGATGCTGCAGTTTTCTGTGCAAAAAGTATTAACAACGCAGAGCTGGGTGAAGGGGACAACAAGGTGTGTAGTTTCTTGAAGAACTAATGGGATTTAATTTTTACGGTTCTTCTCAGGTTTCTGTTCTTAATTCAACTCATGCTTTTTTTTTTTCTTCAATTTCTATGTCTATTAGGCTAAAGTAAGGGCTAGATTATCCAGACCACTGCAAAGGGGTAAAGGAAAACATGCAAGTCGTGCAGATTATTGGCCTGGGCATGCAACTGGACGAGCATTAAGGGGTTCTTGGGGGCGACCAGCTCCACAAAGTCTTCCAGTTCGAGTAAGAGGTGTAGGCAGCCATTTCCCACCGGTCAGTGTAAAGAGGCCTGGTGGGGTTAGAGATAGACGTCCTGTCATTGCAATGCCAGAACGAGGAAGACCTATTGCTCCTGTAGCAAGGTCTTATGACAGGGGACCTCCTGGTATGCATCATTTTTAATGACTGATGAATTCTATATTCAACTTGAAGTTGTTAATTTTTGGTTTATTTGTACAGTTGCTTCTTACTCAAAGAGTAGTTTTAAAAGGGAGTATGGTCGACATGAGGAGCTGCATCCATCCAGAAGCAGGGTACTTGTTGATTATTCCTCCAGGGTTGTACCTGATCGAAATGCATCTTACAGAGAGGAATATGCTTCTTCTCGTACAACTGCCTTCTCAGATCCACCTAGGAGAGATGTGCCTAGGAGAGCTTATGTGGACGATGATTATGGTCGAAGGTTTGAGAGACCCCCTCCTCCAAGCTACCGTGATGTTCGTGCACGTGATTATGATTCCCTAATTGGATCAAAACGTCCATATTCTTCATTGGTAAGATTTATTATTTGCTTTTCTTAGTACTTGTTGCATTTGATTTCCCATTACAATGCCCCAACTAACTTTTTTGGCCAAATTTTAGAGTGATGTGCCTCCAGCTTATGCTGATGCTGGTGTTCGACAATCAAGAAGTCGTTTGGACTATGATTATGGTGCTGGTGCTTCTCAATATGGAGATGCCTACGACAGCAGGTTTGTTAAATTCCCCCCATCCTTGGAGCACAGAGATGGAGGAATAGATGATAAATCAAATATCAAGTATTTTATTAGAGAAGATGTAATTGCATTTTACTAATTCTTTGACTTGTAGTTTTATATTTTTAGTAACTCAGATGTCATCTGGTTGATAGGATTGGGAGATCAAACATTGGTGGATATGATGGTCGAAGCTCCATCTCAGGTCAGGGCTTATAATAGGGGTGTATGTGGCAGCCAGCAGGCTGTTGGATACGGAGGAAGTTGCATGTGATGCTAGGTTGACAAGTGTATAACATTGTTGTAAGCTTATGATTTTCCATTGATTTTTCAGGTTCTTTTAGTAGTGATGTTGGTGGAATGTACTCGTCCAGCTATGGTGGTGATTACATGACACGTGGTAGCAATGTATGATTATTATTATTATTATTTTGTGCATACATTTTGTGTTATTGATTTCTCTCATTTTGAGGAGATGTCTTTTGTTTTTGCTAGGTGGGTGGCAGCTCTTACTCATCAATGTACCATGGGCGCAGTGCGGGGGGCAGCAGTTATATGGGTAATGGTGGCGGGTCTGGATCTTACTACTGATGTGAGTCAAATTTCACCTTTTTTGTTCCATTTCATCCATAATTCTGTTTCTCCTTTTTCTTCCTTTTCTCCTTTTATTTCCCCTCCCTCTTTTTCTAAGTTGTAGATCTTTTCTTTCTTCCTATGAAGGAGATTCCATTCTCTTTTCTTTTCCCCCCTAAGAAGAGTGTTTAGTGGAAGTGGAACAATATGGTCACAAGTTATCTGTTTATGGAACAGACTTGATATGATAAAGAGGCTCCTGTAGGATGTGAACAATGTTTGGAAGCTTTTGCATTATCTGCCTCTACCATTCTGGGAAGGAAAATTTATCAAGATTACCGGCCTCTAAACTTTATTTCTAGAGTATGATCGAATGACGTAACATACTGGTTAAGTTGTTAAGACCTTGCTGGTTTTTGATATTTGTAATTGGACCATGTAAGGGAACTCGTGACGTATTCAGAAATGAAGAAAGACGTGCCTGATTGTGCATATTCATAAGTTGCATTTATGTATGTTTTCTCTTGAGAACACGTCCCGAATAGTGGAAGGTGGGGTGGTTTTGTATCCCCTTTTTGTTTTGGAGTACGGACATCAAATATGGGGGTTAAGTGGATTTCGTATTATACGTATTGGAGCAGTGTTGTCTTGGAACCCTCTACGGTAACAGTTAGCAACAGGCACATATGATTAATATGAAAGTAAATAGCGGATGTGGTTATTTGATGCAAGAAATGTTGAGCTTTTTGGATACTTTCTAGTCCTGATGAAAGGCCCTGAAGTGGAGTAGTGCTCCATATATTTGTTACTGTTTATTTATTGGCTTAAGTAGAGACTTGGAGACTTTTATTCAATATATCTATTGTAACTTATTGGTATTCTAGTTCTTTCTTAGACTAGGTGGGGTACAATTTTTGGAATTGACAGTTCATTTCTTACGTTCTTTCAAGTTGTTAGCTCTGAGATGTGGACGGGGTCGGTTAGGGTGAGGCCGACACGTTTCCTTTTCATTTTGTTTGGAAGATGGAAGCAACATAAGTCTGATTTTCGTTCTTTTTTTGGTTTAATCGGGACGTAAGGTTTAAGGCATTCGATATTATTGGTCATGGCAGGCACCCAAATAGAAGGATATGATTTAGAATTAGGAGTGAAATGATTTTGTTCAAGAAACTGGTAGATGGCTGAGTTTTATTTCACCTATGAGAAATACCAAATTAGGGCTTCTTCCTCTTCTATATTGATTCCAAAGTTTCAGGATATTGATTGATTAGTGTAGTTAGGCATGAGGTTGCATCGCTTTGGTTTTGGCAGCATCGAGATCGTTCGAAGCTATAATTTTTTTCTTTTGTGTTGGCATCGCTTTATTTGTATCTGTAGGCTGATGTATGTATGTATATATTATGTTTATTTTGAACAATTGAAATAGAGTTCGTTGCATGAACCTCTTCTGGGTGAAATTTGGTTCGATTCGAGTGGTTTCCTTATATGCACAAAACATAGGATTGTTCGACATTGGTGTATGTATGTTATGATTCGAATGTCCTAAATTACGAACGATTATTTAATTTAGACATCTGATTTATTTCAGAAGATTGGTTACAG

mRNA sequence

ACATATTCTCAATTTTCTATCCATCTTCTAGGGTTTCGTTTTTTCTTTCGAATATCAATTTCTTCTCTAATCGCTCGTTTTTCCGAAAAAAATTTCGTATTTCCACCACCTGATTTGCAACTCTCAGATTTTCTAGGGTTGTTTCTTCGTCAACGCTTCAGATCCTTTGAAGTTGTTGAGATGCCTCCAAGGACGGTAAAGAGAGGGGCGGCATCAGCCGGATCGAAGAGAGGTGGAAGGGTCACAAGAGGGACACCGAATAAGAAACAACAGCCGCCGGAACGGGAGGTTGCCGAAGAGACGGTGAAGGTCGAGGAGGTCTCGGTGGTTGAGGTGGAAACCAAGGAGATTCCCGAGGAAGTAACGGTGCAGGAAAAAAGCCCTGTTGTCGAAGACGAGCCAGTCATTCCGAATATGCCGGTAGTTGTCGAAGATGAGCCAGTCATTCTGAATAATCTGGTAGTTGTCGAGGAGAAGCCACCTGTTGCCATAGACGTTGAGGAGGTCGAACCTTCGCACGAAGTCGGATCGGATTCTAAACCCTTGGTTCCTCCTAAAAAAGAAGTAAAGGATGAAGAATTTGGAAAGGATGAACGCTTGGATCTTGAAGACAATGATCCTGAATCAGAACCTGAGGAGGAGTTTGATGAAAAAGAAATTGGACAAGCGGATGTTCAGGACATGGTATATGGAGAGGGTGAACCTGAGGACAATGTGGGCGATGGGGAGGGTGTTATGGGGGTAGATGATGTTGAGGATGTTCAGGAGGATCATGAGGGAGAGGAGGATGATCAGCAAGTTGCTGAAGGCCATGAGCATGCTGGCATGGTTGATGCTGATGAGGATGAGCATCATGAAGTTGTAGAGGAGAGGCGTAAGCGCAAAGAATTTGAAGTGTTTGTTGGGGGCTTGGACAAGGATGTAAAGGAGGAGGATTTAAAGAAAGTTTTCAGTGCAGTTGGTGAAGTTACTGAAGTCAGGCTAATGATGAACCCTCAGACGAAGAAGAATAAAGGTTTTGCATTTTTACGTTTTGCTACAGTTGAAGAGGCAAAACGTGCTGTGTCAGAGCTAAAGAATCCAGTGATTAATGGGAAACAATGTGGTGTGACTCCAAGTCAAGACAGTGACACCCTTTTTCTTGGTAACATATGCAAGACATGGAAAAAGGATGTTCTGAAGGAGAAGTTGAAACATTATGGAGTTGATAATGTTGAGGATCTGACTTTGGTAGAAGATAGTAATAATGAAGGATTAAATCGTGGATTTGCTTTTTTGGAATTTTCATCTCGCTTAGATGCCATGGATGCCTTCAAGCGTCTTCAAAAAAGGGATGTTGTATTTGGAGTCGATAGACCTGCCAAAGTGTCTTTTGCAGATTCTTTTATAGATCCTGGTGATGAAATTATGGCCCAGGTCAAGACTGTTTTTGTTGATAGTCTCCCTGGCTCATGGGATGAGGTATTTGTTCGAGGACTTCTTAAGAAGTATGGGGAGATTGAAAAAATTGAGCTTGCCCGAAATATGCCTTCAGCAAAGAGAAAGGACTTTGGTTTTGTTACATTTGACACACATGATGCTGCAGTTTTCTGTGCAAAAAGTATTAACAACGCAGAGCTGGGTGAAGGGGACAACAAGGCTAAAGTAAGGGCTAGATTATCCAGACCACTGCAAAGGGGTAAAGGAAAACATGCAAGTCGTGCAGATTATTGGCCTGGGCATGCAACTGGACGAGCATTAAGGGGTTCTTGGGGGCGACCAGCTCCACAAAGTCTTCCAGTTCGAGTAAGAGGTGTAGGCAGCCATTTCCCACCGGTCAGTGTAAAGAGGCCTGGTGGGGTTAGAGATAGACGTCCTGTCATTGCAATGCCAGAACGAGGAAGACCTATTGCTCCTGTAGCAAGGTCTTATGACAGGGGACCTCCTGTTGCTTCTTACTCAAAGAGTAGTTTTAAAAGGGAGTATGGTCGACATGAGGAGCTGCATCCATCCAGAAGCAGGGTACTTGTTGATTATTCCTCCAGGGTTGTACCTGATCGAAATGCATCTTACAGAGAGGAATATGCTTCTTCTCGTACAACTGCCTTCTCAGATCCACCTAGGAGAGATGTGCCTAGGAGAGCTTATGTGGACGATGATTATGGTCGAAGGTTTGAGAGACCCCCTCCTCCAAGCTACCGTGATGTTCGTGCACGTGATTATGATTCCCTAATTGGATCAAAACGTCCATATTCTTCATTGAGTGATGTGCCTCCAGCTTATGCTGATGCTGGTGTTCGACAATCAAGAAGTCGTTTGGACTATGATTATGGTGCTGGTGCTTCTCAATATGGAGATGCCTACGACAGCAGGATTGGGAGATCAAACATTGGTGGATATGATGGTCGAAGCTCCATCTCAGGTTCTTTTAGTAGTGATGTTGGTGGAATGTACTCGTCCAGCTATGGTGGTGATTACATGACACGTGGTAGCAATGTGGGTGGCAGCTCTTACTCATCAATGTACCATGGGCGCAGTGCGGGGGGCAGCAGTTATATGGGTAATGGTGGCGGGTCTGGATCTTACTACTGATACTTGATATGATAAAGAGGCTCCTGTAGGATGTGAACAATGTTTGGAAGCTTTTGCATTATCTGCCTCTACCATTCTGGGAAGGAAAATTTATCAAGATTACCGGCCTCTAAACTTTATTTCTAGAGTATGATCGAATGACGTAACATACTGGTTAAGTTGTTAAGACCTTGCTGGTTTTTGATATTTGTAATTGGACCATGTAAGGGAACTCGTGACGTATTCAGAAATGAAGAAAGACGTGCCTGATTGTGCATATTCATAAGTTGCATTTATGTATGTTTTCTCTTGAGAACACGTCCCGAATAGTGGAAGGTGGGGTGGTTTTGTATCCCCTTTTTGTTTTGGAGTACGGACATCAAATATGGGGGTTAAGTGGATTTCGTATTATACGTATTGGAGCAGTGTTGTCTTGGAACCCTCTACGGTAACAGTTAGCAACAGGCACATATGATTAATATGAAAGTAAATAGCGGATGTGGTTATTTGATGCAAGAAATGTTGAGCTTTTTGGATACTTTCTAGTCCTGATGAAAGGCCCTGAAGTGGAGTAGTGCTCCATATATTTGTTACTGTTTATTTATTGGCTTAAGTAGAGACTTGGAGACTTTTATTCAATATATCTATTGTAACTTATTGGTATTCTAGTTCTTTCTTAGACTAGGTGGGGTACAATTTTTGGAATTGACAGTTCATTTCTTACGTTCTTTCAAGTTGTTAGCTCTGAGATGTGGACGGGGTCGGTTAGGGTGAGGCCGACACGTTTCCTTTTCATTTTGTTTGGAAGATGGAAGCAACATAAGTCTGATTTTCGTTCTTTTTTTGGTTTAATCGGGACGTAAGGTTTAAGGCATTCGATATTATTGGTCATGGCAGGCACCCAAATAGAAGGATATGATTTAGAATTAGGAGTGAAATGATTTTGTTCAAGAAACTGGTAGATGGCTGAGTTTTATTTCACCTATGAGAAATACCAAATTAGGGCTTCTTCCTCTTCTATATTGATTCCAAAGTTTCAGGATATTGATTGATTAGTGTAGTTAGGCATGAGGTTGCATCGCTTTGGTTTTGGCAGCATCGAGATCGTTCGAAGCTATAATTTTTTTCTTTTGTGTTGGCATCGCTTTATTTGTATCTGTAGGCTGATGTATGTATGTATATATTATGTTTATTTTGAACAATTGAAATAGAGTTCGTTGCATGAACCTCTTCTGGGTGAAATTTGGTTCGATTCGAGTGGTTTCCTTATATGCACAAAACATAGGATTGTTCGACATTGGTGTATGTATGTTATGATTCGAATGTCCTAAATTACGAACGATTATTTAATTTAGACATCTGATTTATTTCAGAAGATTGGTTACAG

Coding sequence (CDS)

ATGCCTCCAAGGACGGTAAAGAGAGGGGCGGCATCAGCCGGATCGAAGAGAGGTGGAAGGGTCACAAGAGGGACACCGAATAAGAAACAACAGCCGCCGGAACGGGAGGTTGCCGAAGAGACGGTGAAGGTCGAGGAGGTCTCGGTGGTTGAGGTGGAAACCAAGGAGATTCCCGAGGAAGTAACGGTGCAGGAAAAAAGCCCTGTTGTCGAAGACGAGCCAGTCATTCCGAATATGCCGGTAGTTGTCGAAGATGAGCCAGTCATTCTGAATAATCTGGTAGTTGTCGAGGAGAAGCCACCTGTTGCCATAGACGTTGAGGAGGTCGAACCTTCGCACGAAGTCGGATCGGATTCTAAACCCTTGGTTCCTCCTAAAAAAGAAGTAAAGGATGAAGAATTTGGAAAGGATGAACGCTTGGATCTTGAAGACAATGATCCTGAATCAGAACCTGAGGAGGAGTTTGATGAAAAAGAAATTGGACAAGCGGATGTTCAGGACATGGTATATGGAGAGGGTGAACCTGAGGACAATGTGGGCGATGGGGAGGGTGTTATGGGGGTAGATGATGTTGAGGATGTTCAGGAGGATCATGAGGGAGAGGAGGATGATCAGCAAGTTGCTGAAGGCCATGAGCATGCTGGCATGGTTGATGCTGATGAGGATGAGCATCATGAAGTTGTAGAGGAGAGGCGTAAGCGCAAAGAATTTGAAGTGTTTGTTGGGGGCTTGGACAAGGATGTAAAGGAGGAGGATTTAAAGAAAGTTTTCAGTGCAGTTGGTGAAGTTACTGAAGTCAGGCTAATGATGAACCCTCAGACGAAGAAGAATAAAGGTTTTGCATTTTTACGTTTTGCTACAGTTGAAGAGGCAAAACGTGCTGTGTCAGAGCTAAAGAATCCAGTGATTAATGGGAAACAATGTGGTGTGACTCCAAGTCAAGACAGTGACACCCTTTTTCTTGGTAACATATGCAAGACATGGAAAAAGGATGTTCTGAAGGAGAAGTTGAAACATTATGGAGTTGATAATGTTGAGGATCTGACTTTGGTAGAAGATAGTAATAATGAAGGATTAAATCGTGGATTTGCTTTTTTGGAATTTTCATCTCGCTTAGATGCCATGGATGCCTTCAAGCGTCTTCAAAAAAGGGATGTTGTATTTGGAGTCGATAGACCTGCCAAAGTGTCTTTTGCAGATTCTTTTATAGATCCTGGTGATGAAATTATGGCCCAGGTCAAGACTGTTTTTGTTGATAGTCTCCCTGGCTCATGGGATGAGGTATTTGTTCGAGGACTTCTTAAGAAGTATGGGGAGATTGAAAAAATTGAGCTTGCCCGAAATATGCCTTCAGCAAAGAGAAAGGACTTTGGTTTTGTTACATTTGACACACATGATGCTGCAGTTTTCTGTGCAAAAAGTATTAACAACGCAGAGCTGGGTGAAGGGGACAACAAGGCTAAAGTAAGGGCTAGATTATCCAGACCACTGCAAAGGGGTAAAGGAAAACATGCAAGTCGTGCAGATTATTGGCCTGGGCATGCAACTGGACGAGCATTAAGGGGTTCTTGGGGGCGACCAGCTCCACAAAGTCTTCCAGTTCGAGTAAGAGGTGTAGGCAGCCATTTCCCACCGGTCAGTGTAAAGAGGCCTGGTGGGGTTAGAGATAGACGTCCTGTCATTGCAATGCCAGAACGAGGAAGACCTATTGCTCCTGTAGCAAGGTCTTATGACAGGGGACCTCCTGTTGCTTCTTACTCAAAGAGTAGTTTTAAAAGGGAGTATGGTCGACATGAGGAGCTGCATCCATCCAGAAGCAGGGTACTTGTTGATTATTCCTCCAGGGTTGTACCTGATCGAAATGCATCTTACAGAGAGGAATATGCTTCTTCTCGTACAACTGCCTTCTCAGATCCACCTAGGAGAGATGTGCCTAGGAGAGCTTATGTGGACGATGATTATGGTCGAAGGTTTGAGAGACCCCCTCCTCCAAGCTACCGTGATGTTCGTGCACGTGATTATGATTCCCTAATTGGATCAAAACGTCCATATTCTTCATTGAGTGATGTGCCTCCAGCTTATGCTGATGCTGGTGTTCGACAATCAAGAAGTCGTTTGGACTATGATTATGGTGCTGGTGCTTCTCAATATGGAGATGCCTACGACAGCAGGATTGGGAGATCAAACATTGGTGGATATGATGGTCGAAGCTCCATCTCAGGTTCTTTTAGTAGTGATGTTGGTGGAATGTACTCGTCCAGCTATGGTGGTGATTACATGACACGTGGTAGCAATGTGGGTGGCAGCTCTTACTCATCAATGTACCATGGGCGCAGTGCGGGGGGCAGCAGTTATATGGGTAATGGTGGCGGGTCTGGATCTTACTACTGA

Protein sequence

MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEEVTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSKPLVPPKKEVKDEEFGKDERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVGDGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKRKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLNRGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVGSHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKREYGRHEELHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDDYGRRFERPPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSYSSMYHGRSAGGSSYMGNGGGSGSYY

Homology

[Close]

BLAST of CmoCh06G012310 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 2.7e-32
Identity = 100/307 (32.57%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 238 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 297
           E+FVG + +D+ E++L  +F   G + ++RLMM+P T  N+G+AF+ F T E A+ AV  
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222

Query: 298 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNN 357
             N  I +GK  GV  S  ++ LF+G+I K+  K+ + E+      + + D+ L    ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282

Query: 358 EGLNRGFAFLEFSSRLDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 417
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   DP  E+MA+VK 
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 342

Query: 418 VFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSI 477
           +FV +L  +  E  +     ++G++E+++        K KD+ F+ FD  D AV   + +
Sbjct: 343 LFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 402

Query: 478 NNAELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGHATGRAL 528
           N  +L EG+N      K   + R  R  QR   K+    DY+         P    GR  
Sbjct: 403 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 457

[Close]

BLAST of CmoCh06G012310 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 3.5e-32
Identity = 100/307 (32.57%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 238 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 297
           E+FVG + +D+ E++L  +F   G + ++RLMM+P T  N+G+AF+ F T E A+ AV  
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222

Query: 298 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNN 357
             N  I +GK  GV  S  ++ LF+G+I K+  K+ + E+      + + D+ L    ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282

Query: 358 EGLNRGFAFLEFSSRLDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 417
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   DP  E+MA+VK 
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 342

Query: 418 VFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSI 477
           +FV +L  +  E  +     ++G++E+++        K KD+ F+ FD  D AV   + +
Sbjct: 343 LFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 402

Query: 478 NNAELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGHATGRAL 528
           N  +L EG+N      K   + R  R  QR   K+    DY+         P    GR  
Sbjct: 403 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 457

[Close]

BLAST of CmoCh06G012310 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.5e-32
Identity = 100/307 (32.57%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 238 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 297
           E+FVG + +D+ E++L  +F   G + ++RLMM+P T  N+G+AF+ F T E A+ AV  
Sbjct: 73  EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132

Query: 298 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNN 357
             N  I +GK  GV  S  ++ LF+G+I K+  K+ + E+      + + D+ L    ++
Sbjct: 133 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 192

Query: 358 EGLNRGFAFLEFSSRLDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 417
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   DP  E+MA+VK 
Sbjct: 193 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 252

Query: 418 VFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSI 477
           +FV +L  +  E  +     ++G++E+++        K KD+ F+ FD  D AV   + +
Sbjct: 253 LFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 312

Query: 478 NNAELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGHATGRAL 528
           N  +L EG+N      K   + R  R  QR   K+    DY+         P    GR  
Sbjct: 313 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 367

[Close]

BLAST of CmoCh06G012310 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 6.8e-28
Identity = 111/364 (30.49%), Postives = 192/364 (52.75%), Query Frame = 0


Query: 137 DERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVGDGEGVMGVD--DVEDV 196
           D+R+D E+    SE E+E +E+++ +       Y E E ED+  D  G    +  +VED 
Sbjct: 8   DDRVDFEEGS-YSEMEDEVEEEQVEE-------YEEEEEEDDDDDDVGNQNAEEREVEDY 67

Query: 197 QEDHEGEEDD--QQVAEGHE-HAGMVDADEDEHHEVVEERRKRKEF-----------EVF 256
            +   G+ +D  +++AE  + H  +  AD+DE      +   R+++           EVF
Sbjct: 68  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 127

Query: 257 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 316
           +GGL +DV EEDL+ +   +GE+ EVRLM +  +  +KG+AF+ F T + A++A+ EL +
Sbjct: 128 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 187

Query: 317 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 376
               GK    + S+  + LF+GNI K W +D  ++ ++  G   VE++ L++D  N   N
Sbjct: 188 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRN 247

Query: 377 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPA-KVSFADSFIDP-GDEIMAQVKTVFV 436
           RGFAF+ + +  +A   + R +  D  F ++  A  V++AD    P      AQVK ++V
Sbjct: 248 RGFAFVLYYN--NACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 307

Query: 437 DSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAK--RKDFGFVTFDTHDAAVFCAKSIN 481
            ++P +     ++ L +++GE+ KI      P  K  ++DFGFV +    +A+   K   
Sbjct: 308 KNIPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTE 356

[Close]

BLAST of CmoCh06G012310 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.4e-26
Identity = 94/305 (30.82%), Postives = 157/305 (51.48%), Query Frame = 0


Query: 238 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 297
           EVFVG + +D+ E++L  +F   G + ++RLMM+P + +N+G+AF+ F   E A+ AV  
Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225

Query: 298 LKNPVIN-GKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNN 357
             +  I  GK  GV  S  ++ LF+G+I K   K+ + E+      + + D+ L    ++
Sbjct: 226 CDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKV-TEGLVDVILYHQPDD 285

Query: 358 EGLNRGFAFLEFSSRLDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 417
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   +P  E+MA+VK 
Sbjct: 286 KKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWG--NVVTVEWADPVEEPDPEVMAKVKV 345

Query: 418 VFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSI 477
           +FV +L  +  E  +     ++G++E+++        K KD+ FV F+   AAV     +
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMDEM 405

Query: 478 NNAELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVR 537
           N  E+ EG+    V A+   P ++ K + A+R       +   A    +  P P+ +P  
Sbjct: 406 NGKEI-EGEEIEIVLAK--PPDKKRKERQAARQ-----ASRSTAYEDYYYHPPPR-MPPP 450

Query: 538 VRGVG 541
           +RG G
Sbjct: 466 IRGRG 450

[Close]

BLAST of CmoCh06G012310 vs. ExPASy TrEMBL
Match: A0A6J1GX48 (nucleolin-like OS=Cucurbita moschata OX=3662 GN=LOC111458188 PE=4 SV=1)

HSP 1 Score: 1524.6 bits (3946), Expect = 0.0e+00
Identity = 796/796 (100.00%), Postives = 796/796 (100.00%), Query Frame = 0


Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE 60
           MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE
Sbjct: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE 60

Query: 61  VTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSK 120
           VTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSK
Sbjct: 61  VTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSK 120

Query: 121 PLVPPKKEVKDEEFGKDERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVG 180
           PLVPPKKEVKDEEFGKDERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVG
Sbjct: 121 PLVPPKKEVKDEEFGKDERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVG 180

Query: 181 DGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKRKEFEVF 240
           DGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKRKEFEVF
Sbjct: 181 DGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKRKEFEVF 240

Query: 241 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 300
           VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN
Sbjct: 241 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 300

Query: 301 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 360
           PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN
Sbjct: 301 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 360

Query: 361 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS 420
           RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS
Sbjct: 361 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS 420

Query: 421 LPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL 480
           LPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL
Sbjct: 421 LPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL 480

Query: 481 GEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVG 540
           GEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVG
Sbjct: 481 GEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVG 540

Query: 541 SHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKREYGRHEE 600
           SHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKREYGRHEE
Sbjct: 541 SHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKREYGRHEE 600

Query: 601 LHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDDYGRRFER 660
           LHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDDYGRRFER
Sbjct: 601 LHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDDYGRRFER 660

Query: 661 PPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDA 720
           PPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDA
Sbjct: 661 PPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDA 720

Query: 721 YDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSYSSMYHGRSA 780
           YDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSYSSMYHGRSA
Sbjct: 721 YDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSYSSMYHGRSA 780

Query: 781 GGSSYMGNGGGSGSYY 797
           GGSSYMGNGGGSGSYY
Sbjct: 781 GGSSYMGNGGGSGSYY 796

[Close]

BLAST of CmoCh06G012310 vs. ExPASy TrEMBL
Match: A0A6J1IB27 (nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111473466 PE=4 SV=1)

HSP 1 Score: 1461.8 bits (3783), Expect = 0.0e+00
Identity = 773/796 (97.11%), Postives = 780/796 (97.99%), Query Frame = 0


Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE 60
           MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQP EREVAEETVKVEEVSVVEVETKEIPEE
Sbjct: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPLEREVAEETVKVEEVSVVEVETKEIPEE 60

Query: 61  VTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSK 120
           VTVQEKSPVVEDEPVIPNMPV VEDEPVI NN VVVEEK PVAIDVEEVEPSHEVGSDSK
Sbjct: 61  VTVQEKSPVVEDEPVIPNMPVGVEDEPVIRNNPVVVEEKQPVAIDVEEVEPSHEVGSDSK 120

Query: 121 PLVPPKKEVKDEEFGKDERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVG 180
           PLVPPKKEVKDEEF KDERLDLEDNDPESEPEEEFDEK+IGQADVQDMVYGEGEPEDNVG
Sbjct: 121 PLVPPKKEVKDEEFEKDERLDLEDNDPESEPEEEFDEKDIGQADVQDMVYGEGEPEDNVG 180

Query: 181 DGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKRKEFEVF 240
           DGEGVMG+DDVE VQEDHEGEEDDQQVAEGHE+AGMVDADEDEHHEVVEERRKRKEFEVF
Sbjct: 181 DGEGVMGIDDVEHVQEDHEGEEDDQQVAEGHENAGMVDADEDEHHEVVEERRKRKEFEVF 240

Query: 241 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 300
           VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN
Sbjct: 241 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 300

Query: 301 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 360
           PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN
Sbjct: 301 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 360

Query: 361 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS 420
           RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS
Sbjct: 361 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS 420

Query: 421 LPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL 480
           LPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL
Sbjct: 421 LPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL 480

Query: 481 GEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVG 540
           GEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVG
Sbjct: 481 GEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPVRVRGVG 540

Query: 541 SHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKREYGRHEE 600
           SHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSS KREYGRHE+
Sbjct: 541 SHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSLKREYGRHED 600

Query: 601 LHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDDYGRRFER 660
           LHPSRSRVLVDYSSRVVPDRNAS+REEYA SRTTAFSDP     PRRAYVDDDYGRRFER
Sbjct: 601 LHPSRSRVLVDYSSRVVPDRNASFREEYA-SRTTAFSDP-----PRRAYVDDDYGRRFER 660

Query: 661 PPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDA 720
           PPPPSYRDVRARDYDSL+GSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDA
Sbjct: 661 PPPPSYRDVRARDYDSLVGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDA 720

Query: 721 YDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSYSSMYHGRSA 780
           YDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNV GSSYSSMYHGRSA
Sbjct: 721 YDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVSGSSYSSMYHGRSA 780

Query: 781 GGSSYMGNGGGSGSYY 797
           GGSSYMG+ GGSGSYY
Sbjct: 781 GGSSYMGS-GGSGSYY 789

[Close]

BLAST of CmoCh06G012310 vs. ExPASy TrEMBL
Match: A0A1S3AW67 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103483455 PE=4 SV=1)

HSP 1 Score: 1283.5 bits (3320), Expect = 0.0e+00
Identity = 697/804 (86.69%), Postives = 727/804 (90.42%), Query Frame = 0


Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE 60
           MPPRTVKRG+ASAG+KRGGR TRGTP K+ QP EREVAEET KVEEVSVVEVETKE+ EE
Sbjct: 1   MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVAEETAKVEEVSVVEVETKELREE 60

Query: 61  VTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSK 120
           V VQEKSPVVED+PVI N P             VVVEEK P+A+DV EVE SHEV SDSK
Sbjct: 61  VAVQEKSPVVEDKPVIQNKP-------------VVVEEKQPIAVDVGEVESSHEVRSDSK 120

Query: 121 PLVPPKK--EVKDEEFGKDERLDLEDNDPESEPEE----EFDEKEIGQADVQDMVYGEGE 180
             VPPKK  EVKDEE+GKDERLDLEDNDPESEPEE    E+DEKEI Q DVQ++V GEGE
Sbjct: 121 QSVPPKKEEEVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGE 180

Query: 181 PEDNVGDGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKR 240
           PEDNVGD EG M  +DVED QED EGE+DDQQ  E HEHAGMVDADEDEHHEVV+ERRKR
Sbjct: 181 PEDNVGDEEGDMVEEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKR 240

Query: 241 KEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRA 300
           KEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRA
Sbjct: 241 KEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRA 300

Query: 301 VSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDS 360
           VSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKD LKEKLKHYGVDNVEDLTLVEDS
Sbjct: 301 VSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDS 360

Query: 361 NNEGLNRGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVK 420
           NNEG NRGFAFLEFSSR DAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVK
Sbjct: 361 NNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVK 420

Query: 421 TVFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKS 480
           TVFVDSLP SWDE FVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAV CAKS
Sbjct: 421 TVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKS 480

Query: 481 INNAELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPV 540
           INN+ELGEGD+KAKVRARLSRPLQRGKGKHASRADYWPG  TGR +RGSW RPAP+S+P+
Sbjct: 481 INNSELGEGDSKAKVRARLSRPLQRGKGKHASRADYWPGRTTGR-VRGSWARPAPRSIPI 540

Query: 541 R-VRGVGSHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKR 600
           R VRGVGSH PPVSVKRP GVRDRRPVIA+P RGRP+A VARSYDRGPPVASYSKSS KR
Sbjct: 541 RGVRGVGSHLPPVSVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKR 600

Query: 601 EYGRHEELHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDD 660
           EYGR EELHPSRSR+LVDY+SRVVP+RN SYR+EYA SR  AFSDPPRRD PRRAYVDD 
Sbjct: 601 EYGRREELHPSRSRMLVDYASRVVPERNPSYRDEYA-SRAAAFSDPPRRDAPRRAYVDDG 660

Query: 661 YGRRFERPPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAG 720
           Y RRFERPPPPSYRDVRARDYD+LIGSKRPYSS+SDVPPAYADAGVRQSRSRLDYDYG G
Sbjct: 661 YSRRFERPPPPSYRDVRARDYDALIGSKRPYSSMSDVPPAYADAGVRQSRSRLDYDYGTG 720

Query: 721 ASQYGDAYDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGG-SSYS 780
           ASQYGDAYDSRIGRSNIGGYD RSSISGSFSSDV GMYSSSYGG+YMTRGSNVGG SSYS
Sbjct: 721 ASQYGDAYDSRIGRSNIGGYDSRSSISGSFSSDV-GMYSSSYGGEYMTRGSNVGGSSSYS 780

Query: 781 SMYHGRSAGGSSYMGNGGGSGSYY 797
           SMY GRS GGSSYMG+ GGSGSYY
Sbjct: 781 SMYPGRSVGGSSYMGS-GGSGSYY 787

[Close]

BLAST of CmoCh06G012310 vs. ExPASy TrEMBL
Match: A0A0A0L6P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129610 PE=4 SV=1)

HSP 1 Score: 1282.7 bits (3318), Expect = 0.0e+00
Identity = 694/804 (86.32%), Postives = 725/804 (90.17%), Query Frame = 0


Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE 60
           MPPRTVKRG+ASAG+KRGGR TRGTP K+ QP EREV EET KVEEVSVVEVETKE+ EE
Sbjct: 1   MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSVVEVETKELREE 60

Query: 61  VTVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSDSK 120
           V VQEKSPVVED+PVI N P             VVVEEK P+A+DV EVE S EV SDSK
Sbjct: 61  VAVQEKSPVVEDKPVIQNKP-------------VVVEEKQPIAVDVGEVESSREVRSDSK 120

Query: 121 PLVPPKK--EVKDEEFGKDERLDLEDNDPESEPEE----EFDEKEIGQADVQDMVYGEGE 180
             VPPKK  EVKDEE+GKDERLDLEDNDPESEP+E    E+DEKEI Q DVQ++V GEGE
Sbjct: 121 QSVPPKKEEEVKDEEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGE 180

Query: 181 PEDNVGDGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKR 240
           PEDNVGD EG M  +DVED QED EGE+DDQQ  E HEHAGMVDADEDEHHEVV+ERRKR
Sbjct: 181 PEDNVGDEEGDMVEEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKR 240

Query: 241 KEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRA 300
           KEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRA
Sbjct: 241 KEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRA 300

Query: 301 VSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDS 360
           VSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKD LKEKLKHYGVDNVEDLTLVEDS
Sbjct: 301 VSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDS 360

Query: 361 NNEGLNRGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVK 420
           NNEG NRGFAFLEFSSR DAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVK
Sbjct: 361 NNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVK 420

Query: 421 TVFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKS 480
           TVFVDSLP SWDE FVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAV CAKS
Sbjct: 421 TVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKS 480

Query: 481 INNAELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSLPV 540
           INN+ELGEGDNKAKVRARLSRPLQRGKGKHASR DYWPG  TGR +RGSW RPAP+S+P+
Sbjct: 481 INNSELGEGDNKAKVRARLSRPLQRGKGKHASRTDYWPGRTTGR-VRGSWTRPAPRSIPI 540

Query: 541 R-VRGVGSHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSFKR 600
           R VRGVGSH PPVSVKRP GVRDRRPVIA+P RGRP+A VARSYDRGPPVASYSKSS KR
Sbjct: 541 RGVRGVGSHLPPVSVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKR 600

Query: 601 EYGRHEELHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVDDD 660
           +YGR EELHPSRSR+LVDY+SRVVP+RN SYR++YA SR  AFSDPPRRD PRRAYVDD 
Sbjct: 601 DYGRREELHPSRSRMLVDYASRVVPERNPSYRDDYA-SRAAAFSDPPRRDAPRRAYVDDG 660

Query: 661 YGRRFERPPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAG 720
           Y RRFERPPPPSYRDVRARDYD+LIGSKRPYSS+SDVPPAYAD GVRQSRSRLDYDYGAG
Sbjct: 661 YSRRFERPPPPSYRDVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAG 720

Query: 721 ASQYGDAYDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGG-SSYS 780
           ASQYGDAYDSRIGRSNIGGYD RSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGG SSYS
Sbjct: 721 ASQYGDAYDSRIGRSNIGGYDSRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSSYS 780

Query: 781 SMYHGRSAGGSSYMGNGGGSGSYY 797
           SMY GRS GGSSYMG+ GGSGSYY
Sbjct: 781 SMYPGRSVGGSSYMGS-GGSGSYY 788

[Close]

BLAST of CmoCh06G012310 vs. ExPASy TrEMBL
Match: A0A6J1CZX0 (nucleolin OS=Momordica charantia OX=3673 GN=LOC111016019 PE=4 SV=1)

HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 695/805 (86.34%), Postives = 730/805 (90.68%), Query Frame = 0


Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVEVETKEIPEE 60
           MPPRTVKRGAASAGSKRGGRVTRGTP K+  P EREV EETVKVEEVSVVEVETKE+ EE
Sbjct: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDPPXEREVPEETVKVEEVSVVEVETKELREE 60

Query: 61  VTV--QEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGSD 120
           VTV  +EKSPVVED+PVI + P             VVVEEK P+AIDVEEVEP H+V SD
Sbjct: 61  VTVKEKEKSPVVEDKPVIQSKP-------------VVVEEKQPIAIDVEEVEPPHDVRSD 120

Query: 121 SKPLVPPKK--EVKDEEFGKDERLDLEDNDPESEPEE----EFDEKEIGQADVQDMVYGE 180
           SK  VPPKK  EVKD+E+GKDERLDLEDNDPESEPEE    EFDEKEI Q DVQ++V G+
Sbjct: 121 SKQSVPPKKEEEVKDDEYGKDERLDLEDNDPESEPEEYGGFEFDEKEIEQEDVQEVVDGD 180

Query: 181 GEPEDNVGDGEGVMGVDDVEDVQEDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERR 240
           GEPEDNVGD E   G +DVEDVQED EGEEDDQQ AE HEHAGMVDADE+EHHEV +ERR
Sbjct: 181 GEPEDNVGDEE---GEEDVEDVQEDPEGEEDDQQAAEDHEHAGMVDADEEEHHEVFKERR 240

Query: 241 KRKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAK 300
           KRKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAK
Sbjct: 241 KRKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAK 300

Query: 301 RAVSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVE 360
           RAVSELKNPVINGKQCGVTPSQDSDTLFLGNI KTWKKD LKEKLKHYGVDNVEDLTLVE
Sbjct: 301 RAVSELKNPVINGKQCGVTPSQDSDTLFLGNINKTWKKDALKEKLKHYGVDNVEDLTLVE 360

Query: 361 DSNNEGLNRGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQ 420
           DSNNEG NRGFAFLEFSSR DAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQ
Sbjct: 361 DSNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQ 420

Query: 421 VKTVFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCA 480
           VKTVFVDSLP SWDE FVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFD+HDAAV CA
Sbjct: 421 VKTVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVSCA 480

Query: 481 KSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGHATGRALRGSWGRPAPQSL 540
           KSINN+ELGEGDNKAKVRARLSRPLQRGKGKHA RAD+WPG  +GRA+RGSWGRPAP+SL
Sbjct: 481 KSINNSELGEGDNKAKVRARLSRPLQRGKGKHAGRADFWPGRTSGRAVRGSWGRPAPRSL 540

Query: 541 PVR-VRGVGSHFPPVSVKRPGGVRDRRPVIAMPERGRPIAPVARSYDRGPPVASYSKSSF 600
            VR VRGVGSHFPPVSVKRPGGVRDRRPVIA+P RGR IAPVARSYDRGPPVASYSKS+ 
Sbjct: 541 SVRGVRGVGSHFPPVSVKRPGGVRDRRPVIAVPVRGRQIAPVARSYDRGPPVASYSKSNL 600

Query: 601 KREYGRHEELHPSRSRVLVDYSSRVVPDRNASYREEYASSRTTAFSDPPRRDVPRRAYVD 660
           KR+YGR EELHPSRSRVLVDY+SRVVP+RN  YR+EYA SR   FSDPPRRD PRRAY+D
Sbjct: 601 KRDYGRREELHPSRSRVLVDYASRVVPERNPPYRDEYA-SRAPGFSDPPRRDAPRRAYLD 660

Query: 661 DDYGRRFERPPPPSYRDVRARDYDSLIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYG 720
           D YGRRFERPPPPSYRDVRARDYD++IGSKRPYSSLSDVPPAYADAGVRQSRSRL+Y+YG
Sbjct: 661 DGYGRRFERPPPPSYRDVRARDYDAIIGSKRPYSSLSDVPPAYADAGVRQSRSRLEYEYG 720

Query: 721 AGASQYGDAYDSRIGRSNIGGYDGRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSY 780
           AGASQYGDAYDSRIGRSNIGGYD RSSISGSFSSDVGGMYSSSYGGDY++RGSNVGGSSY
Sbjct: 721 AGASQYGDAYDSRIGRSNIGGYDSRSSISGSFSSDVGGMYSSSYGGDYISRGSNVGGSSY 780

Query: 781 SSMYHGRSAGGSSYMGNGGGSGSYY 797
           SSMY GRS GGSSYMG+  GSGSYY
Sbjct: 781 SSMYPGRSVGGSSYMGS-SGSGSYY 787

[Close]

BLAST of CmoCh06G012310 vs. TAIR 10
Match: AT2G44710.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 706.8 bits (1823), Expect = 1.9e-203
Identity = 459/855 (53.68%), Postives = 564/855 (65.96%), Query Frame = 0


Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPNKKQQPPEREVAEETVKVEEVSVVE-VETKEIPE 60
           MPP+ VKRG A   ++RGGR+TR +  K Q P      +E+V + E+S  + +E KE+  
Sbjct: 1   MPPKVVKRGGA---ARRGGRLTR-SALKAQNPHVESSHDESVNIGELSGSDALEAKEVTP 60

Query: 61  EV--TVQEKSPVVEDEPVIPNMPVVVEDEPVILNNLVVVEEKPPVAIDVEEVEPSHEVGS 120
           EV  TV+E++P+               D P           K   +ID  E   +  V  
Sbjct: 61  EVDKTVEEENPL---------------DVP-----------KSSDSIDDSEAAANPHVD- 120

Query: 121 DSKPLVPPKKEVKDEE----FGKDERLDLEDNDPESEPE----EEFDEKEIGQADVQDMV 180
                VP KKE + EE    FGKDERLDL+DN+PE E E    EEF+E+E+GQ D  ++V
Sbjct: 121 -----VPSKKETEVEESVDDFGKDERLDLDDNEPEYEAEEYGGEEFEERELGQED-HELV 180

Query: 181 YGEGEPEDNVGDGEGVMG--VDDVEDVQEDHEGEEDDQQVA-EGHEHAGMVDADEDEHHE 240
             EGE  +   + E   G   D++ D  ED + E+DD   A E  +H   VD +E+EHH+
Sbjct: 181 NEEGEELEEEIEVEEEAGEFADEIGDGAEDLDSEDDDDDHAIEEVKHGETVDVEEEEHHD 240

Query: 241 VVEERRKRKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA 300
           V+ ERRKRKEFE+FVG LDK   EEDLKKVF  VGEVTEVR++ NPQTKK+KG AFLRFA
Sbjct: 241 VLHERRKRKEFEIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFA 300

Query: 301 TVEEAKRAVSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVE 360
           TVE+AKRAV ELK+P+INGK+CGVT SQD+DTLF+GNICK W  + L+EKLKHYGV+N++
Sbjct: 301 TVEQAKRAVKELKSPMINGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMD 360

Query: 361 DLTLVEDSNNEGLNRGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPG 420
           D+TLVEDSNN  +NRG+AFLEFSSR DAMDA KRL K+DV+FGV++PAKVSF DSF+D  
Sbjct: 361 DITLVEDSNNVNMNRGYAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLE 420

Query: 421 DEIMAQVKTVFVDSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHD 480
           DEIMAQVKT+F+D L  SW+E  VR LLK YG++EK+ELARNMPSA+RKDFGFVTFDTH+
Sbjct: 421 DEIMAQVKTIFIDGLLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHE 480

Query: 481 AAVFCAKSINNAELGEGDNKAKVRARLSRPLQR-GKGKHASRADYWPGHATGRALRGSWG 540
           AAV CAK INN+ELGEG++KAKVRARLSRPLQ+ GKG+ +SR+D    H  GR+ R S+ 
Sbjct: 481 AAVSCAKFINNSELGEGEDKAKVRARLSRPLQKAGKGRQSSRSDQRSRHGAGRSGRSSFA 540

Query: 541 RPAPQSLPV--RVRGVGSHFPPVSVKRPGGVRDRRP--------------------VIAM 600
           R  P+SL      RG GS  P  S KR  G R RRP                     +  
Sbjct: 541 RLPPRSLASSRSARGAGSRAPSSSAKRASGSRGRRPRPPLPPPARARPLPPPARARPMPP 600

Query: 601 PERGRPIAPVARSYDRGPPVASYSKSSFKREYGRHEELHPSRSRVLVDYSSRVVPDRNAS 660
           P R RP+ P ARSYDR PPV  Y K+S KR+Y R +EL P RSR  V YSSR+ P+R+ S
Sbjct: 601 PARARPLPPPARSYDRRPPVPLYPKASLKRDYDRRDELPPPRSRPAVSYSSRLSPERHLS 660

Query: 661 YREEYASSRTTAFSDPPR---RDVPRRAYVDDDYGRRFERPPPPSYRDVRARDYDSLIGS 720
           YR++Y   R + +SD PR   R   RR +VDD Y  RFER  PPSY + R R Y+ L GS
Sbjct: 661 YRDDY-PPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFER--PPSYSEGRPRAYEPLPGS 720

Query: 721 KRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDSRIGRSNIGGYDGRSSIS 780
           KRPY++L D+PP YAD  VR SR RLDYD   G SQYG++Y  RI RS++G    R+S+S
Sbjct: 721 KRPYAALDDLPPRYADVDVRHSRPRLDYD--VGPSQYGESYGDRIPRSSLGYGSSRNSMS 780

Query: 781 ------------------GSFS-SDVGGMYSSSYGGDYMTRGSNVGGSSYSSMYHGRSAG 797
                             GS+S SDVGGMYSSSYGGD   R    GGSSYSS+Y  R  G
Sbjct: 781 NHDSRGPYSSRQGMDYGGGSYSGSDVGGMYSSSYGGDLPRRDG--GGSSYSSIYSSRGLG 809

[Close]

BLAST of CmoCh06G012310 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 127.5 bits (319), Expect = 4.8e-29
Identity = 111/364 (30.49%), Postives = 192/364 (52.75%), Query Frame = 0


Query: 137 DERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVGDGEGVMGVD--DVEDV 196
           D+R+D E+    SE E+E +E+++ +       Y E E ED+  D  G    +  +VED 
Sbjct: 8   DDRVDFEEGS-YSEMEDEVEEEQVEE-------YEEEEEEDDDDDDVGNQNAEEREVEDY 67

Query: 197 QEDHEGEEDD--QQVAEGHE-HAGMVDADEDEHHEVVEERRKRKEF-----------EVF 256
            +   G+ +D  +++AE  + H  +  AD+DE      +   R+++           EVF
Sbjct: 68  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 127

Query: 257 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 316
           +GGL +DV EEDL+ +   +GE+ EVRLM +  +  +KG+AF+ F T + A++A+ EL +
Sbjct: 128 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 187

Query: 317 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 376
               GK    + S+  + LF+GNI K W +D  ++ ++  G   VE++ L++D  N   N
Sbjct: 188 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRN 247

Query: 377 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPA-KVSFADSFIDP-GDEIMAQVKTVFV 436
           RGFAF+ + +  +A   + R +  D  F ++  A  V++AD    P      AQVK ++V
Sbjct: 248 RGFAFVLYYN--NACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 307

Query: 437 DSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAK--RKDFGFVTFDTHDAAVFCAKSIN 481
            ++P +     ++ L +++GE+ KI      P  K  ++DFGFV +    +A+   K   
Sbjct: 308 KNIPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTE 356

[Close]

BLAST of CmoCh06G012310 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 127.5 bits (319), Expect = 4.8e-29
Identity = 111/364 (30.49%), Postives = 192/364 (52.75%), Query Frame = 0


Query: 137 DERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVGDGEGVMGVD--DVEDV 196
           D+R+D E+    SE E+E +E+++ +       Y E E ED+  D  G    +  +VED 
Sbjct: 8   DDRVDFEEGS-YSEMEDEVEEEQVEE-------YEEEEEEDDDDDDVGNQNAEEREVEDY 67

Query: 197 QEDHEGEEDD--QQVAEGHE-HAGMVDADEDEHHEVVEERRKRKEF-----------EVF 256
            +   G+ +D  +++AE  + H  +  AD+DE      +   R+++           EVF
Sbjct: 68  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 127

Query: 257 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 316
           +GGL +DV EEDL+ +   +GE+ EVRLM +  +  +KG+AF+ F T + A++A+ EL +
Sbjct: 128 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 187

Query: 317 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 376
               GK    + S+  + LF+GNI K W +D  ++ ++  G   VE++ L++D  N   N
Sbjct: 188 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRN 247

Query: 377 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPA-KVSFADSFIDP-GDEIMAQVKTVFV 436
           RGFAF+ + +  +A   + R +  D  F ++  A  V++AD    P      AQVK ++V
Sbjct: 248 RGFAFVLYYN--NACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 307

Query: 437 DSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAK--RKDFGFVTFDTHDAAVFCAKSIN 481
            ++P +     ++ L +++GE+ KI      P  K  ++DFGFV +    +A+   K   
Sbjct: 308 KNIPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTE 356

[Close]

BLAST of CmoCh06G012310 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 4.5e-27
Identity = 109/364 (29.95%), Postives = 188/364 (51.65%), Query Frame = 0


Query: 137 DERLDLEDNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVGDGEGVMGVD--DVEDV 196
           D+R+D E+    SE E+E +E+++ +       Y E E ED+  D  G    +  +VED 
Sbjct: 8   DDRVDFEEGS-YSEMEDEVEEEQVEE-------YEEEEEEDDDDDDVGNQNAEEREVEDY 67

Query: 197 QEDHEGEEDD--QQVAEGHE-HAGMVDADEDEHHEVVEERRKRKEF-----------EVF 256
            +   G+ +D  +++AE  + H  +  AD+DE      +   R+++           EVF
Sbjct: 68  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 127

Query: 257 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKN 316
           +GGL +DV EEDL+ +   +GE+ EVRLM +  +  +KG+AF+ F T + A++A+ EL +
Sbjct: 128 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 187

Query: 317 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLN 376
                          S+ LF+GNI K W +D  ++ ++  G   VE++ L++D  N   N
Sbjct: 188 KEFKASSTANCSLSLSNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRN 247

Query: 377 RGFAFLEFSSRLDAMDAFKRLQKRDVVFGVDRPA-KVSFADSFIDP-GDEIMAQVKTVFV 436
           RGFAF+ + +  +A   + R +  D  F ++  A  V++AD    P      AQVK ++V
Sbjct: 248 RGFAFVLYYN--NACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYV 307

Query: 437 DSLPGSWDEVFVRGLLKKYGEIEKIELARNMPSAK--RKDFGFVTFDTHDAAVFCAKSIN 481
            ++P +     ++ L +++GE+ KI      P  K  ++DFGFV +    +A+   K   
Sbjct: 308 KNIPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTE 356

[Close]

BLAST of CmoCh06G012310 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-26
Identity = 95/347 (27.38%), Postives = 173/347 (49.86%), Query Frame = 0


Query: 137 DERLDLE-DNDPESEPEEEFDEKEIGQADVQDMVYGEGEPEDNVGDGEGVMGVDDVEDVQ 196
           +ER+DL+ DNDPE   EEE + +E+ + +++++                       E+++
Sbjct: 18  EERVDLDGDNDPEEILEEEVEYEEVEEEEIEEI----------------------EEEIE 77

Query: 197 EDHEGEEDDQQVAEGHEHAGMVDADEDEHHEVVEERRKRKEFEVFVGGLDKDVKEEDLKK 256
           E+ E EE++++     E A   + +E++   V          EV++GG+  D  E DLK 
Sbjct: 78  EEVEVEEEEEE-----EDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKG 137

Query: 257 VFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQCGVTPSQD 316
              ++GEVTEVR+M    +   KG+AF+ F + + A  A+  L N    GK+   + +Q 
Sbjct: 138 FCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQA 197

Query: 317 SDTLFLGNICKTWKKDVLKEKLKHYGVDNVEDLTLVEDSNNEGLNRGFAFLEFSSRLDAM 376
              LFLGN+ + W +  +K+     G   V+ + L ++  N G NRGFAF+E+ +   A 
Sbjct: 198 KHRLFLGNVPRNWMESDIKKAANRIG-PGVQIVELPKEPQNMGRNRGFAFIEYYNH--AC 257

Query: 377 DAFKRLQKRDVVFGVDRPA-KVSFADSFI-DPGDEIMAQVKTVFVDSLPGSWDEVFVRGL 436
             + + +  +  F +D  A  VS+A+S     GD   +QVK +++ +LP    +  ++ L
Sbjct: 258 AEYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKAL 317

Query: 437 LKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVFCAKSINNAEL 481
            + +G+I K+ +    P  +   +GFV +    + +   K+    E+
Sbjct: 318 FEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEI 334

The following BLAST results are available for this feature:

BLAST of CmoCh06G012310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O60506	2.7e-32	32.57	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	3.5e-32	32.57	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	3.5e-32	32.57	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
Q9ASP6	6.8e-28	30.49	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O43390	6.4e-26	30.82	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]

BLAST of CmoCh06G012310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GX48	0.0e+00	100.00	nucleolin-like OS=Cucurbita moschata OX=3662 GN=LOC111458188 PE=4 SV=1	[more]
A0A6J1IB27	0.0e+00	97.11	nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111473466 PE=4 SV=1	[more]
A0A1S3AW67	0.0e+00	86.69	nucleolin OS=Cucumis melo OX=3656 GN=LOC103483455 PE=4 SV=1	[more]
A0A0A0L6P0	0.0e+00	86.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129610 PE=4 SV=1	[more]
A0A6J1CZX0	0.0e+00	86.34	nucleolin OS=Momordica charantia OX=3673 GN=LOC111016019 PE=4 SV=1	[more]

BLAST of CmoCh06G012310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44710.1	1.9e-203	53.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.1	4.8e-29	30.49	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	4.8e-29	30.49	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	4.5e-27	29.95	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.1	2.9e-26	27.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 238..311 e-value: 2.3E-24 score: 97.0 coord: 415..490 e-value: 6.6E-11 score: 52.2 coord: 318..397 e-value: 1.5E-4 score: 31.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 416..481 e-value: 2.0E-8 score: 33.9 coord: 319..385 e-value: 3.7E-6 score: 26.7 coord: 239..307 e-value: 3.8E-19 score: 68.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 237..315 score: 18.342115
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 414..496 score: 13.242551
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 317..401 score: 12.79911
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 176..317 e-value: 7.2E-26 score: 93.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 318..400 e-value: 1.1E-15 score: 59.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 404..525 e-value: 3.9E-14 score: 54.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 625..649
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..599
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..142
None	No IPR available	PANTHER	PTHR21245	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN	coord: 1..796
None	No IPR available	PANTHER	PTHR21245:SF9	OSJNBB0038F03.1 PROTEIN	coord: 1..796
None	No IPR available	CDD	cd00590	RRM_SF	coord: 239..310 e-value: 1.01587E-20 score: 84.6641
None	No IPR available	CDD	cd00590	RRM_SF	coord: 416..481 e-value: 1.32634E-10 score: 55.7741
None	No IPR available	CDD	cd00590	RRM_SF	coord: 319..386 e-value: 3.37607E-11 score: 57.7001
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 316..481
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 232..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G012310.1	CmoCh06G012310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding