CmoCh06G011600 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G011600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent DNA helicase 2 subunit KU80
LocationCmo_Chr06: 8894475 .. 8899940 (+)
RNA-Seq ExpressionCmoCh06G011600
SyntenyCmoCh06G011600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAAGGAAGTGGAGGAGGGGGAACCGAACAATCGAATCGTTTAAATTAGTCTTCGCCTGTTCTCCATTTCAAAGCTTCCGCCCCAAGCTTCTCTGCCACTGCACTCCTCTCTTCAATGGCTCGCAACAGGGTAAACTCTTTACTGTCTTTACTTTCTTCTGCTTTTGCTTCGATCTCTTCAGATTACGTCTTCTTCATGCGTGGCTAAGCTGAGTTAGTTTTTAATGCGCTCGGTCTCAGTTATTCAGTCCTTCTTTGCAACAAGTTCAGTTCAATTTCGCTAACACTTGAGTTAGTACGCTTGTGTTTACGGCTAGGGTTTAGGTTTTGTTGTCTAAGAAGCTAATTAGGATTGAGGATGTTGGCTCGAGTTTCTTAAAGGTAATCGAGTGCTACAAAATCTGAATGAATGAGGATTATTGATCTCCTTTAGCCTGTGAATTCAATTCATAGGAAAAATTGTAACCAGTACCAATATTTTAGCTTCGACAGAGGCATGTTTCTTAGCATATTTGTTCTAAGAAATATTTGTAAAAATTAACAATCGGGATATTGGCCACACTTCTTGCTTGTGTTCTTCAGCCATGCGTCGCTAATACTCGGCATCGGCCTTTCGAGAAATAACAAGGTTTTAAGTTTTCAATGTGAGACATGATCTGTTGGAGGTAATAGGTTCAAGCCATGAGAAAAATTATCGAGAGAGGCTGCCACAATGTGTCTGCATCTTAAGAACGGTCGGATGTAGATCCATAAATATATCAGCCCTTTATATATATTCAATTTCTTCCACACATCTAATGGTGCAAAACAACTAATCACATTATGTGGCCTCCGAGGGGAACGAGTGCCAACAAAGACGTTGGGCGAATGAGGGGGGTGGACACTGAATGAGTGCCAGCTAGGGCGCTGGGTCCCGAAGGGTGGTGTATTGTGAGATCCCATATCGATTGGAGAGAGGAACAAGTGCCAGCGAGGACGCTAGGCTTTGAATGAGGGTGGATTGTGAGGTCTCACATCCGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTTGAAACCTCTCCCTAACAGACACGTTTTAAAAACTTTGAGGGAAAATTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTAGGTTATTACGTTGTATGACTATAAGGCTCACCAAACTCTTTGTTCGAAATCTGAGGATTTCTTCACGACTCACTTACCACAATTAGATTTAGACCATGACTCTAATACCAATTGTCAAGGACAACAAAACCTCCTTCTATCTCCACCTTAATATGACGTTGTGCACTTTGAGCATTAACCTTCATTAACCTTTATGACTTTGCTTTTAATTTTTTAAAAAGGTCCCGTACCAATGGATATTATTGCTCTCACTTATATACCCACAGTCACTTTCTTCTGTAGCTAATGTGGCACTTTGTTTGCATTTCTAACATTAATATCCTAACTTTGAAAACTAAATGTAGTAAGGTTGGTGGTTGTCCTACGAGGGCATCCTTGGGGGTGCCTATGAGCTATAACTTAAAGAACACTTTTAAAGCTACAATTGTTCTTCTATCTTAGCAAGTACCAAGCTATTATATCATATTTTTATCCTATATGCATATTTCTGACATTCAAGGATTTATGTTAAATGGAATAGGAAATCTTGGTGCTTGTGCTGGATGTTGGTCCATCAATGCACTCTATTCTCCCTGAGGTTGAAAAAGTGTGTTCAATGCTGGTGGAGAAGAAGGTATTACCGTCGTCAAGGTCCCATTTGATAACGATTTTGTTTTTGAAAATTATGCTTGCTTCCTACTATTTCTTTACTGTCGATTTCACAATTCTTAAAGAAACACTTGAATTCTAATCAAATTTAAAAGAAAAAAACAAGTTTTTAAAATTTGGCTAAGATTTTTTAAACAATTTAAAAAACTAGATAACTAAACAAAAGTAGTATTTTTAAGTTTAATTTTCAAAAACCAAATGGTTATCGAGCAAGACCTAGCGTATTTAAAGTTTTCCTTCAATTGAAGTCTATTGAGTGTATTGTCTACCCGATAATTTTTTATGTATCAGAAGTTACTTAATTTTTATCCTCTTGTGATGCAGCTGATTTACAGCAAATATGATGAAGTGGGAATTGTTCTATTTGGAACCAAAGGTTTCTCCTTTTTCTTTTTCTTATTTTATTTTCACAATAAAAAATTTTACGATGTTTTTCCGTCTTCGTATGCTATGTTTCATAGTTTTTGTATTCTCGTAGAATTCATCGGCAGACATGGTTGAAATTTTCTGTATCTAGTTCGTGTACGGATTACTTAACTATGCAATGAAATTTGTAGAAACGAAAAACGAGCTAACAGAGGAAGTTGGTGGGTATCAGCATGTGGTGGTTCTACAGAACATGAAGGTTGTTGATGGAGATCTCGTTGATGTTTTAAAACGACTCCCTCGAGGGACCGTTTCCGGTGATTGTATCCAAGATTTTGCAAGTTCTTTGTTCTTTTGTTTCATAGCTGCATCATTTTATAATAGATTATTGGAGGTTTCGTAAATTAAGTATCCAAATTTTTCATACCTTTGGTTCCTTTACATGGTCGGTAGTTCTTGATGCCATAATTGTGGGAATGGATATGTTGATTAAGAAATTTGGAGAGACAGAAAAAGGAAAGAAACGCTTATGCCTTATTACTGATGCTCTATTCCCTATAAAAGAACCTTATGAAGGGACTAAAGAGGACCAAGTTTCGGCCATTGCGCAGCAGATGACAAAACACGGCATGAGAATGGATAGTGTCGTTGTGAGAAGGAGGTTCGGTCGGGATGCAGATGAGAAAATGATGGACGAGAACGACGTTCTCTTGAACATATTTTCAGAGAAAACGAATGCAAAAATGGTGTATGTGGAGAGCCCAACTTCGTTATTAGGTGCAATCCGGACTCGGAGTATATCGCCCGTGACAATTTATAGAGGCGATCTTGAAATAAGCTCTGTCATCAAGATTAAGGTAAAGTATTTAGTCTCTTACATAGCTTATTCCAAGCATTTTCAGTGACGTTCTTGAAAAATATCTGGCATATCGAGCGTTGGATCTTTTCGGTAGAAATCGAGGGTATCTTTTATCTTTTTTACACATGATTGATAGTCATCATTGATCAAAGTTCATGCTCTAATTCAATCAGGTATGGGTTTATAAGAAAACATCAGAAGAGAAGTTTCCAACTCTGAAAAGATATTCTGATAAGGCACCTTCAACTGATAAATTTGCCACACATGAAGTCAAGGTAGATTACGAGTACAAAAGCGCCGAAGACACTAGTAAGGTCGTGCCTCCAGAACATAGGATTAAAGGATATCGTTACGGACCTCAAGTGATTCCGATATCAACTGCTGAATGGGATGCAGTCAAGTTCAAACCAGAAAAGAGCGTGAAGCTTCTCGGATTTACGAATGCATCGAATATAATGCGGTAGATTCTAGCTGTTTTGAAAATTTTATACTCATAACTTGTGTTGTGAAATCTCCTGGTTTGCTTACATTTTTGTTTGAAGGCACTACTACATGAAAGACGTCAATGTCTTTATTGCTGAACCTGGCAATAAAAGAGCCATTGTTGCAGTTTCTGCACTAGCAAGAGCAATGAAGGAAATGGACAAAGTGGCGATAGTGCGATGCGTTTGGAGACAAGGACAGGGGAGCGTCGTCGTCGGTGTCTTGACACCCAACATATCGGAGAAGAATGGTATTGTATGTCTAAATACATTTTTCTGCGTACTTTGTTTTGTTATATATCGGAGAAGAATGGTATCGATGATCGTTTTTGATAGGCCGATTCATTATACTTCAATGTACTTCCCTTTGCGGAGGATGTTCGAGAATTCCAGTTTCCTTCTTTCAACAATTTTCCAGCATTGATGCAGCCGAGCGAAGAACAGCAAGAGGCAGCGGACGAATTCGTTAAGATGCTTGATCTTGCACCATCTGGACGGGAGGAAATTCTGCAACCGGATTTCACACCAAATCCTGTTCTTGAGGTATACCTTTATGTTTTTTTTGTTTTTTCGAATCATTCAGACACACAATTCACCGTGCATTTCTATTGAGAATTTCACATTGGTTGGCGAGGAGAACGAAACACTTTTTATAAGGGTGTGAAAACTTTTCCCTAACAGACGCATTTTAAAAACCTTGAGGGGAAACCCCAAAGGGAAAGTCCAAAGAGAACAATATCTGCTAGCGGTGGGCTTGGGCCATTACAATTTCCTCCTATTTGATGTTTCTAATAGACAGTGTATTGTGTTTGCAGCGCTTCTATCGTCATCTCGAGTTGAAATCGAAGGATCCAGCTGCGGCTGTACCTCCACTCGATGCAACTCTCCAGAAGATTACCGAGCCAGATCCCGACTTGTTGTCTCAAAACAAATCTGGTATTGGCACATTCGACAGAAGATTCGAACTCAAGGAGAATCCAAAGGTAGTTCATCATCGACTTTGTATTCAATAACTGATACATTCATGTTATCGAAATTTTGAACGTGATCCAAAATGCAGCTAAAGAAACCAAGAAGGCTATATTTACGCGAAAAACCATCCGGTTCGAGCGACAAAGAGGATAATGAAGAAATTTCTGCTCAAATTGTCGTCTCCGCTGCCAATACGCGGTTAGTCAAGGTAGAAAAAATCGGAGATTCAACACCTCTCCAAGATTTTGAAGCTATGATGTCTAGAAGAGATAGTCCAGAGTGGATCAATAAAGCAATCAATGAAATGAAAAACAAAATTTTCGACCTTGTCGAGAACTCCTGCGACGGTGATAACTATCCAAAAGCTCTCGAGTATCTACTAGCGCTACGCAAGGGTTGCATCATTGAACAAGTATATTACTCTCTATCTGTCTCTTCTTTTTCACGCTCGAGAATAAAACAACTCATGTTTTATACAGGAACCGACGCAATTCAACGATTTCCTCCGCCATCTCTGTAAATTTTGCCTGGAAAAGAACCTCCATAGCTTCTGTGAGCTCCTTGCATTCGAACGACTTAGCTTGATCTCCAAGAAAGAAGCGGCCGACAGGTTTAACATTCGTTTTTCTTGTTCAAACCGCCATGAAACTCTTCTTTACACTGTTCTTCCTCTGCAAACGTTCTGAGTTTGTTTATCATATATTGAACAGTGAAGTAGCTGATGATGAAGCTAGAAGCTTTTTGGTTAAAATGGAGCCTAAATTTGAGCCTAAAATGGATCCCAAATTAGAGCAAATCTAGTGATGAAGGTACTTACCGTTCATTACATGTATAGATGTAATTTTATGTGTTCATCCAATGTTCACTTACTAATCTTCTCTGAATTGAATTATACAGCTTCCTTAATTTTCCTTTTTTATCTTTAATTTTTCCTTTATTATTGTTGAAATTTTATTTTACATTTAATGGGAAATTTTAATTAGCCCA

mRNA sequence

TAAAAAGGAAGTGGAGGAGGGGGAACCGAACAATCGAATCGTTTAAATTAGTCTTCGCCTGTTCTCCATTTCAAAGCTTCCGCCCCAAGCTTCTCTGCCACTGCACTCCTCTCTTCAATGGCTCGCAACAGGGAAATCTTGGTGCTTGTGCTGGATGTTGGTCCATCAATGCACTCTATTCTCCCTGAGGTTGAAAAAGTGTGTTCAATGCTGGTGGAGAAGAAGCTGATTTACAGCAAATATGATGAAGTGGGAATTGTTCTATTTGGAACCAAAGAAACGAAAAACGAGCTAACAGAGGAAGTTGGTGGGTATCAGCATGTGGTGGTTCTACAGAACATGAAGGTTGTTGATGGAGATCTCGTTGATGTTTTAAAACGACTCCCTCGAGGGACCGTTTCCGGTGATTTTCTTGATGCCATAATTGTGGGAATGGATATGTTGATTAAGAAATTTGGAGAGACAGAAAAAGGAAAGAAACGCTTATGCCTTATTACTGATGCTCTATTCCCTATAAAAGAACCTTATGAAGGGACTAAAGAGGACCAAGTTTCGGCCATTGCGCAGCAGATGACAAAACACGGCATGAGAATGGATAGTGTCGTTGTGAGAAGGAGGTTCGGTCGGGATGCAGATGAGAAAATGATGGACGAGAACGACGTTCTCTTGAACATATTTTCAGAGAAAACGAATGCAAAAATGGTGTATGTGGAGAGCCCAACTTCGTTATTAGGTGCAATCCGGACTCGGAGTATATCGCCCGTGACAATTTATAGAGGCGATCTTGAAATAAGCTCTGTCATCAAGATTAAGGTATGGGTTTATAAGAAAACATCAGAAGAGAAGTTTCCAACTCTGAAAAGATATTCTGATAAGGCACCTTCAACTGATAAATTTGCCACACATGAAGTCAAGGTAGATTACGAGTACAAAAGCGCCGAAGACACTAGTAAGGTCGTGCCTCCAGAACATAGGATTAAAGGATATCGTTACGGACCTCAAGTGATTCCGATATCAACTGCTGAATGGGATGCAGTCAAGTTCAAACCAGAAAAGAGCGTGAAGCTTCTCGGATTTACGAATGCATCGAATATAATGCGGCACTACTACATGAAAGACGTCAATGTCTTTATTGCTGAACCTGGCAATAAAAGAGCCATTGTTGCAGTTTCTGCACTAGCAAGAGCAATGAAGGAAATGGACAAAGTGGCGATAGTGCGATGCGTTTGGAGACAAGGACAGGGGAGCGTCGTCGTCGGTGTCTTGACACCCAACATATCGGAGAAGAATGGTATTGCCGATTCATTATACTTCAATGTACTTCCCTTTGCGGAGGATGTTCGAGAATTCCAGTTTCCTTCTTTCAACAATTTTCCAGCATTGATGCAGCCGAGCGAAGAACAGCAAGAGGCAGCGGACGAATTCGTTAAGATGCTTGATCTTGCACCATCTGGACGGGAGGAAATTCTGCAACCGGATTTCACACCAAATCCTGTTCTTGAGCGCTTCTATCGTCATCTCGAGTTGAAATCGAAGGATCCAGCTGCGGCTGTACCTCCACTCGATGCAACTCTCCAGAAGATTACCGAGCCAGATCCCGACTTGTTGTCTCAAAACAAATCTGGTATTGGCACATTCGACAGAAGATTCGAACTCAAGGAGAATCCAAAGCTAAAGAAACCAAGAAGGCTATATTTACGCGAAAAACCATCCGGTTCGAGCGACAAAGAGGATAATGAAGAAATTTCTGCTCAAATTGTCGTCTCCGCTGCCAATACGCGGTTAGTCAAGGTAGAAAAAATCGGAGATTCAACACCTCTCCAAGATTTTGAAGCTATGATGTCTAGAAGAGATAGTCCAGAGTGGATCAATAAAGCAATCAATGAAATGAAAAACAAAATTTTCGACCTTGTCGAGAACTCCTGCGACGGTGATAACTATCCAAAAGCTCTCGAGTATCTACTAGCGCTACGCAAGGGTTGCATCATTGAACAAGAACCGACGCAATTCAACGATTTCCTCCGCCATCTCTGTAAATTTTGCCTGGAAAAGAACCTCCATAGCTTCTGTGAGCTCCTTGCATTCGAACGACTTAGCTTGATCTCCAAGAAAGAAGCGGCCGACAGTGAAGTAGCTGATGATGAAGCTAGAAGCTTTTTGGTTAAAATGGAGCCTAAATTTGAGCCTAAAATGGATCCCAAATTAGAGCAAATCTAGTGATGAAGGTACTTACCGTTCATTACATGTATAGATGTAATTTTATGTGTTCATCCAATGTTCACTTACTAATCTTCTCTGAATTGAATTATACAGCTTCCTTAATTTTCCTTTTTTATCTTTAATTTTTCCTTTATTATTGTTGAAATTTTATTTTACATTTAATGGGAAATTTTAATTAGCCCA

Coding sequence (CDS)

ATGGCTCGCAACAGGGAAATCTTGGTGCTTGTGCTGGATGTTGGTCCATCAATGCACTCTATTCTCCCTGAGGTTGAAAAAGTGTGTTCAATGCTGGTGGAGAAGAAGCTGATTTACAGCAAATATGATGAAGTGGGAATTGTTCTATTTGGAACCAAAGAAACGAAAAACGAGCTAACAGAGGAAGTTGGTGGGTATCAGCATGTGGTGGTTCTACAGAACATGAAGGTTGTTGATGGAGATCTCGTTGATGTTTTAAAACGACTCCCTCGAGGGACCGTTTCCGGTGATTTTCTTGATGCCATAATTGTGGGAATGGATATGTTGATTAAGAAATTTGGAGAGACAGAAAAAGGAAAGAAACGCTTATGCCTTATTACTGATGCTCTATTCCCTATAAAAGAACCTTATGAAGGGACTAAAGAGGACCAAGTTTCGGCCATTGCGCAGCAGATGACAAAACACGGCATGAGAATGGATAGTGTCGTTGTGAGAAGGAGGTTCGGTCGGGATGCAGATGAGAAAATGATGGACGAGAACGACGTTCTCTTGAACATATTTTCAGAGAAAACGAATGCAAAAATGGTGTATGTGGAGAGCCCAACTTCGTTATTAGGTGCAATCCGGACTCGGAGTATATCGCCCGTGACAATTTATAGAGGCGATCTTGAAATAAGCTCTGTCATCAAGATTAAGGTATGGGTTTATAAGAAAACATCAGAAGAGAAGTTTCCAACTCTGAAAAGATATTCTGATAAGGCACCTTCAACTGATAAATTTGCCACACATGAAGTCAAGGTAGATTACGAGTACAAAAGCGCCGAAGACACTAGTAAGGTCGTGCCTCCAGAACATAGGATTAAAGGATATCGTTACGGACCTCAAGTGATTCCGATATCAACTGCTGAATGGGATGCAGTCAAGTTCAAACCAGAAAAGAGCGTGAAGCTTCTCGGATTTACGAATGCATCGAATATAATGCGGCACTACTACATGAAAGACGTCAATGTCTTTATTGCTGAACCTGGCAATAAAAGAGCCATTGTTGCAGTTTCTGCACTAGCAAGAGCAATGAAGGAAATGGACAAAGTGGCGATAGTGCGATGCGTTTGGAGACAAGGACAGGGGAGCGTCGTCGTCGGTGTCTTGACACCCAACATATCGGAGAAGAATGGTATTGCCGATTCATTATACTTCAATGTACTTCCCTTTGCGGAGGATGTTCGAGAATTCCAGTTTCCTTCTTTCAACAATTTTCCAGCATTGATGCAGCCGAGCGAAGAACAGCAAGAGGCAGCGGACGAATTCGTTAAGATGCTTGATCTTGCACCATCTGGACGGGAGGAAATTCTGCAACCGGATTTCACACCAAATCCTGTTCTTGAGCGCTTCTATCGTCATCTCGAGTTGAAATCGAAGGATCCAGCTGCGGCTGTACCTCCACTCGATGCAACTCTCCAGAAGATTACCGAGCCAGATCCCGACTTGTTGTCTCAAAACAAATCTGGTATTGGCACATTCGACAGAAGATTCGAACTCAAGGAGAATCCAAAGCTAAAGAAACCAAGAAGGCTATATTTACGCGAAAAACCATCCGGTTCGAGCGACAAAGAGGATAATGAAGAAATTTCTGCTCAAATTGTCGTCTCCGCTGCCAATACGCGGTTAGTCAAGGTAGAAAAAATCGGAGATTCAACACCTCTCCAAGATTTTGAAGCTATGATGTCTAGAAGAGATAGTCCAGAGTGGATCAATAAAGCAATCAATGAAATGAAAAACAAAATTTTCGACCTTGTCGAGAACTCCTGCGACGGTGATAACTATCCAAAAGCTCTCGAGTATCTACTAGCGCTACGCAAGGGTTGCATCATTGAACAAGAACCGACGCAATTCAACGATTTCCTCCGCCATCTCTGTAAATTTTGCCTGGAAAAGAACCTCCATAGCTTCTGTGAGCTCCTTGCATTCGAACGACTTAGCTTGATCTCCAAGAAAGAAGCGGCCGACAGTGAAGTAGCTGATGATGAAGCTAGAAGCTTTTTGGTTAAAATGGAGCCTAAATTTGAGCCTAAAATGGATCCCAAATTAGAGCAAATCTAG

Protein sequence

MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGKKRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDENDVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTSEEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFPALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVPPLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDNEEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVENSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLSLISKKEAADSEVADDEARSFLVKMEPKFEPKMDPKLEQI
Homology
[Close]
BLAST of CmoCh06G011600 vs. ExPASy Swiss-Prot
Match: Q9FQ09 (ATP-dependent DNA helicase 2 subunit KU80 OS=Arabidopsis thaliana OX=3702 GN=KU80 PE=1 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 3.8e-240
Identity = 416/690 (60.29%), Postives = 532/690 (77.10%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNRE LVLVLDVGP+M S+LP+VEK CSML++KKLIY+KYDEVGIV+FGT+ET NEL 
Sbjct: 1   MARNREGLVLVLDVGPAMRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
            E+GGY++V VL+N++VVD    + +K+LPRGTV+GDFLDA+IVGMDMLIK +G   KGK
Sbjct: 61  REIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KR+CLIT+A  P K+P+EGTK+DQVS IA +M   G++M+S+V+R     DA E++++EN
Sbjct: 121 KRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           D LL +FS    AK V V+SP SLLG+++TR ++PVT++RGDLEI+  +KIKVWVYKK +
Sbjct: 181 DHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EE+ PTLK YSDKAP TDKFA HEVKVDY+YK   ++++V+ PE RIKG+RYGPQVIPIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
             + + +KFK +K +KLLGFT ASNI+RHYYMKDVN+ + +P  +++++AVSA+AR MKE
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
            +KVAIVRCVWR GQG+VVVGVLTPN+SE++   DS YFNVLPFAEDVREF FPSFN  P
Sbjct: 361 TNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           +  +P E+QQ  AD  VKMLDLAPS  EE+L+PD TPNPVL+RFY +LELKSK   A +P
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKSKSTDATLP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           P+D T +++ E DP+L S NKS + TF   FE+KENPKLKK  +  LR+KPSGS D EDN
Sbjct: 481 PMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPSGSDD-EDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
             I+        + +  K++ +GD+ P+QDFEAM+SRRD  +W  KAI +MKN I  LVE
Sbjct: 541 RMIT-------YDAKENKIDIVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLVE 600

Query: 601 NSCD-GDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERL 660
           N  D GD   KALE +LALRKGC++EQEP QFN+FL HL K C E+NL    E    +++
Sbjct: 601 NCTDEGD---KALECVLALRKGCVLEQEPKQFNEFLNHLFKLCQERNLSHLLEHFMSKKI 660

Query: 661 SLISKKEAADSEVADDEARSFLVKMEPKFE 690
           +LI K EAADS++ D+ A  F+VK E   E
Sbjct: 661 TLIPKSEAADSDIVDENAGDFIVKQESMLE 679

[Close]
BLAST of CmoCh06G011600 vs. ExPASy Swiss-Prot
Match: Q75IP6 (ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza sativa subsp. japonica OX=39947 GN=KU80 PE=1 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 3.6e-235
Identity = 416/688 (60.47%), Postives = 524/688 (76.16%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARN+E LVL+LDVGPSMH +L EVE +CS LV KKL+Y++ DE+G+VLFGTKET NEL 
Sbjct: 1   MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
           +E+GGY+HVVV +++KVVD +  + L+ LPRGT  GDFLDAI+VG+DMLI+KFG   KGK
Sbjct: 61  KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNI-KGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           +R+CL+TDA  P+++P +GTK+DQV  IA QM +H ++MD ++ R    R     +MDEN
Sbjct: 121 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRESGVR--HNAVMDEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           D LL  F E++  K+V+V+SPTSLLGA+RTR++ PVT++RGDLE+SS  KIKVWVYKKTS
Sbjct: 181 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EEKFPTLK+YSDKAP++DKFA+HEVKVDYEYKS  +   VVPP+ RIKGY YGPQV+PIS
Sbjct: 241 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
           +AEW+AVKFKPEK VKLLGFT+ S+I RHY+MKDV  F+ EPGN +A+ AVSALARAM E
Sbjct: 301 SAEWEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
           M+KVAI+RCVWRQGQG+V +GVLTPNIS    + DS YFN+LPFAED+REFQF SF++ P
Sbjct: 361 MNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           +  QP++EQQEAAD  VKMLDLAP GREEIL+PDFTPNP+LERFYR+L+LKSK P A VP
Sbjct: 421 SSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           PLD  L+KITEPDPD++      I      FELKENPK KK R              +  
Sbjct: 481 PLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPKKKKARTQDRLTYTGADDQAKLL 540

Query: 541 EEISAQI--VVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDL 600
           EE SA+   V  A      K  +IGD  P+QDFEAM+++R S  W+  AI EM+  I  L
Sbjct: 541 EEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITAL 600

Query: 601 VENSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFER 660
           +++SCD DN+ KALE L+ALRK CIIEQEP ++N F+  LC+         F +LL+ ++
Sbjct: 601 IQDSCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSKK 660

Query: 661 LSLISKKEAADSEVADDEARSFLVKMEP 687
            SLISK+EA DS+V ++ AR+F +K EP
Sbjct: 661 ASLISKEEAPDSDVTEEMARNFCLKPEP 685

[Close]
BLAST of CmoCh06G011600 vs. ExPASy Swiss-Prot
Match: Q54LY5 (X-ray repair cross-complementing protein 5 OS=Dictyostelium discoideum OX=44689 GN=ku80 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.7e-80
Identity = 225/779 (28.88%), Postives = 381/779 (48.91%), Query Frame = 0 

Query: 5   REILVLVLDVGPSM-----------HSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTK 64
           +E +V++LD+G  M            S + +  +  ++L ++KLIY K D++G+VL GTK
Sbjct: 8   KEAVVVILDIGLGMTSKDSDGTTTTTSSIEDALRSVTLLYQQKLIYGKKDQLGLVLIGTK 67

Query: 65  ETKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKF 124
            TKN L ++  GYQH+ V+ +++    + +  L+ L  G   GD +D++IV MDMLI+K 
Sbjct: 68  GTKNNLQDD--GYQHITVVSDIEEPSIETLKYLENLAPGESKGDVIDSLIVAMDMLIRK- 127

Query: 125 GETEKGKKRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRF---GR 184
            E +K +KR+ L+T+A  PI         DQ   I  ++   G+     +          
Sbjct: 128 TENKKYQKRIFLVTNARDPINTEDLSIVRDQFKKIDVKLNIIGVDFLEEIEENNMDTSNN 187

Query: 185 DADEKMMDENDVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIK 244
           + ++ + ++N++ L  F+E  +  +V V+    ++   R++S+   T +RG LEI+  +K
Sbjct: 188 NKNKSLKEKNEIFLREFAESVDGVLVPVKQALEMMSFFRSQSVMTRTSFRGALEITPELK 247

Query: 245 IKVWVYKKTSEEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTS------------ 304
           I VW Y K  ++  P+LK+ S  A    +    + +   + K+ ED              
Sbjct: 248 IPVWGYLKMKQQLLPSLKKISSIAQQQIEQQQQQQQQQNKNKNNEDNEDNEEGKPNITLD 307

Query: 305 --------KVVPPEHRI------KGYRYGPQVIPISTAEWDAVKFKPEKSVKLLGFTNAS 364
                    +  P++ I      KGY+YG  +IP S  + D +K+   K +K++GFT+  
Sbjct: 308 VNQEVSYYSITDPDNEILKPDLLKGYKYGKSLIPFSKIDEDQLKYSSSKCLKVVGFTDRK 367

Query: 365 NIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKEMDKVAIVRCVWRQGQGSVVVGVLT 424
           +I  +Y M +  VF+++PG+K++  A+S+   A+ E D+V +VR V +   GS  +G + 
Sbjct: 368 SIPIYYNMGNTEVFVSQPGDKQSEEALSSFIHALVETDQVMVVRYV-KTMNGSPYLGYMI 427

Query: 425 PNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFPALMQ----PSEEQQEAADEFVKML 484
           P++         LY+N LP A+D+R++QFP  +    L +    P+ EQ EA  + +  +
Sbjct: 428 PHVKSD---YVCLYYNHLPLADDIRQYQFPPISPKNPLTRKSNIPNAEQLEATQQLIDSM 487

Query: 485 DLAPSGREE------ILQPDFTPNPVLERFYRHLELKSKDPAAAVPPLDATLQKITEPDP 544
           DL  S  +E      +L+P FT NP+L+ FY+ L  +S  P   +P LD  + +   PD 
Sbjct: 488 DLMKSEFDEDGDPIQMLKPRFTYNPLLQHFYQCLHHRSLHPNTQIPKLDPIIAEYINPDQ 547

Query: 545 DLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN-------------- 604
            +++++K  I  F  +F L +     K   +      +G++   +N              
Sbjct: 548 IIMNKSKQSIKNFADKFPLTKTTVFSKTPAI-SGGNTNGTTSNTNNTMIGGVKYHWKDGM 607

Query: 605 ---EEISAQIVV----SAANTRLVK--------------VEKIGDSTPLQDFEAMMSRRD 664
              EEI+    V    S A  R V               V ++G   P+Q+F+ M++RRD
Sbjct: 608 LIGEEINLDSYVTDDGSEAKKRKVNDFSEFSLDKLVSGYVTEVGTINPVQNFKDMLNRRD 667

Query: 665 SPEWINKAINEMKNKIFDLVENSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLC 691
             + ++KAI  MK +I  LV +S     Y KA E +  LR GCI E E  QFN FL+ + 
Sbjct: 668 M-DLVDKAITLMKERILQLVNDSLRDQYYQKAFECIKELRVGCIRESEAEQFNGFLKDMR 727

[Close]
BLAST of CmoCh06G011600 vs. ExPASy Swiss-Prot
Match: P27641 (X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4)

HSP 1 Score: 184.1 bits (466), Expect = 5.4e-45
Identity = 184/743 (24.76%), Postives = 343/743 (46.16%), Query Frame = 0 

Query: 4   NREILVLVLDVGPSMHSILP-------EVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETK 63
           N+  +VL +DVG +M +  P       + +KV +M V++++     DE+ +VL+GT  T 
Sbjct: 6   NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65

Query: 64  NELTEEVGGYQHVVVLQNMKVVDGDLV-DVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGE 123
           N L  +   YQ++ V +++ + D DL+ D+  ++   +   DFLDA+IV MD++ ++   
Sbjct: 66  NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 125

Query: 124 TEKGKKRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVV--VRRRFGRDAD 183
            + GKK + + TD   P         +DQ+  I   + K G+ +   +     + G   +
Sbjct: 126 KKFGKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGE 185

Query: 184 EKMMDEN-DVLLNIFSEK--TNAKMVYVESPTSLLGAIR-----------TRSISPVTIY 243
              +D   D L   F +K  T  +   +   T ++ ++            + S+  + ++
Sbjct: 186 RGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVF 245

Query: 244 RG----------DLEISSVIKIKVWVYKKTSEEKFPTLKRYSDKAPSTDKFATHEVKVDY 303
           +            L I   + IK+  YK   +EKF    + S            +++ + 
Sbjct: 246 KKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKET 305

Query: 304 EYKSAEDTSKVVPPEHRIKGYRYGPQVIPISTAEWDAVKFKPE-KSVKLLGFTNASNIMR 363
            Y   +D    V  E  I+GYRYG  +IP S  + + +K+K E K   +LGF  +S + R
Sbjct: 306 VYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHR 365

Query: 364 HYYM--KDVNVFIAEPGNKRAIVAVSALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPN 423
            ++M  + + VF A+  ++ A VA+S+L  A+ E++ VAIVR  + + + +  VGV  P 
Sbjct: 366 RFFMGHQVLKVFAAK-DDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 425

Query: 424 ISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFPALMQPSEEQQEAADEFVKMLDLAPSG 483
           I +     + L +  LPF ED+R++ F S  N      P+E Q  A D+ +  + L    
Sbjct: 426 IKD---AYECLVYVQLPFMEDLRQYMFSSLKN-NKKCTPTEAQLSAIDDLIDSMSLVKKN 485

Query: 484 REEILQPDF-----TPNPVLERFYRHLELKSKDPAAAVPPLDATLQKITEPDPDLLSQNK 543
            EE +  D       PNP  +R Y+ L  ++      +PP+   +  + +P  ++ ++ +
Sbjct: 486 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 545

Query: 544 SGIGTFDRRFELKENPKLKKPRRLYLR--------EKPSGSSDKEDNEEISAQIVVSAAN 603
           S +      F L E   +KK  ++  +        E P+    K + EE      +S ++
Sbjct: 546 SPLSKVKTLFPLTE--VIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDH----ISISS 605

Query: 604 TRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVENSCDGDN---YPK 663
                + K+G   P+++F  ++ ++ +      +  E   ++   +E   D +    + K
Sbjct: 606 LAEGNITKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMK 665

Query: 664 ALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLSLISKKEAADS 694
           +++ + A R+  I   E  +FN FL  L +    K L+ F E++  + ++LI+K E   S
Sbjct: 666 SMDCIKAFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGS 715

[Close]
BLAST of CmoCh06G011600 vs. ExPASy Swiss-Prot
Match: P13010 (X-ray repair cross-complementing protein 5 OS=Homo sapiens OX=9606 GN=XRCC5 PE=1 SV=3)

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-45
Identity = 190/754 (25.20%), Postives = 344/754 (45.62%), Query Frame = 0 

Query: 4   NREILVLVLDVGPSMHSILPEVE-------KVCSMLVEKKLIYSKYDEVGIVLFGTKETK 63
           N+  +VL +DVG +M + +P +E       KV +M V++++     DE+ +VLFGT  T 
Sbjct: 6   NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 65

Query: 64  NELTEEVGG--YQHVVVLQNMKVVDGDLV-DVLKRLPRGTVSGDFLDAIIVGMDMLIKKF 123
           N L+   GG  YQ++ V +++ + D DL+ D+  ++  G+   DFLDA+IV MD++  + 
Sbjct: 66  NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET 125

Query: 124 GETEKGKKRLCLITD------------ALFPIKE---------PYEGTKED--------- 183
              +  K+ + + TD             +  +K+         P+   KED         
Sbjct: 126 IGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 185

Query: 184 ----------QVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDENDVLLNIFSEKTNA 243
                      +  I +Q  K G+ +  +V+    G D     +DE    +  FSE    
Sbjct: 186 FRLGGHGPSFPLKGITEQQ-KEGLEIVKMVMISLEGEDG----LDE----IYSFSESLRK 245

Query: 244 KMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTSEEKFPTLKRYSDK 303
             V+ +        I   SI     +   L I S + I++  YK   +E+        D 
Sbjct: 246 LCVFKK--------IERHSIH----WPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVD- 305

Query: 304 APSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPISTAEWDAVKFKPE- 363
                     +++ +  Y   +D    V  E  I+G+RYG  ++P S  + + +K+K E 
Sbjct: 306 ---AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEG 365

Query: 364 KSVKLLGFTNASNIMRHYYMKD--VNVFIAEPGNKRAIVAVSALARAMKEMDKVAIVRCV 423
           K   +LGF  +S + R ++M +  + VF A   ++ A VA+S+L  A+ ++D VAIVR  
Sbjct: 366 KCFSVLGFCKSSQVQRRFFMGNQVLKVFAAR-DDEAAAVALSSLIHALDDLDMVAIVRYA 425

Query: 424 WRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFPALMQPSEEQQ 483
           + + + +  VGV  P+I       + L +  LPF ED+R++ F S  N      P+E Q 
Sbjct: 426 YDK-RANPQVGVAFPHIKHN---YECLVYVQLPFMEDLRQYMFSSLKN-SKKYAPTEAQL 485

Query: 484 EAADEFVKMLDLAPSGR-----EEILQPDFTPNPVLERFYRHLELKSKDPAAAVPPLDAT 543
            A D  +  + LA         E++      PNP  +R ++ L  ++  P   +PP+   
Sbjct: 486 NAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQH 545

Query: 544 LQKITEPDPDLLSQNK---SGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDNEE 603
           +  +  P  ++ ++++   S I T     E K+  ++          +   ++ K   E+
Sbjct: 546 IWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQ 605

Query: 604 ISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVENS 663
             A   VS+       V  +G   P ++F  ++ ++ +      +  E  N++ + +E  
Sbjct: 606 GGAHFSVSSLAEG--SVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQF 665

Query: 664 CDGDNYP---KALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERL 694
            D +  P   K+++ + A R+  I   E  +FN+FL+ L +    K L+ F E++  + +
Sbjct: 666 LDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLKALQEKVEIKQLNHFWEIVVQDGI 714

[Close]
BLAST of CmoCh06G011600 vs. ExPASy TrEMBL
Match: A0A6J1F3H8 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucurbita moschata OX=3662 GN=LOC111441797 PE=3 SV=1)

HSP 1 Score: 1371.7 bits (3549), Expect = 0.0e+00
Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT
Sbjct: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
           EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK
Sbjct: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN
Sbjct: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS
Sbjct: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS
Sbjct: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
           TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE
Sbjct: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
           MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP
Sbjct: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN
Sbjct: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
           EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE
Sbjct: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600

Query: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS 660
           NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS
Sbjct: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS 660

Query: 661 LISKKEAADSEVADDEARSFLVKMEPKFEPKMDPKLEQI 700
           LISKKEAADSEVADDEARSFLVKMEPKFEPKMDPKLEQI
Sbjct: 661 LISKKEAADSEVADDEARSFLVKMEPKFEPKMDPKLEQI 699

[Close]
BLAST of CmoCh06G011600 vs. ExPASy TrEMBL
Match: A0A6J1IFE5 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucurbita maxima OX=3661 GN=LOC111472751 PE=3 SV=1)

HSP 1 Score: 1344.3 bits (3478), Expect = 0.0e+00
Identity = 682/699 (97.57%), Postives = 690/699 (98.71%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNREILVLVLDVGPSMHS+LPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT
Sbjct: 1   MARNREILVLVLDVGPSMHSVLPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
           EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK
Sbjct: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRF RDADEKMMDEN
Sbjct: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFSRDADEKMMDEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSV+K+KVWVYKKTS
Sbjct: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVVKMKVWVYKKTS 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKS EDTSKVVPPEHRIKGYRYGPQVIPIS
Sbjct: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSVEDTSKVVPPEHRIKGYRYGPQVIPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
            AEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE
Sbjct: 301 AAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
           MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           ALMQPSEEQQEA DEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP
Sbjct: 421 ALMQPSEEQQEAVDEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           PLD TLQKIT+PDPDLLSQNKS IGTF RRFELKENPKLKKPRRLYLREKPSGSSDKEDN
Sbjct: 481 PLDTTLQKITKPDPDLLSQNKSAIGTFHRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
           EEISAQIVVSAANT +VKVEKIGDSTPLQDFEAMMSRRD+PEWINKAIN MKNKIFDLVE
Sbjct: 541 EEISAQIVVSAANTSVVKVEKIGDSTPLQDFEAMMSRRDNPEWINKAINGMKNKIFDLVE 600

Query: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS 660
           NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERL+
Sbjct: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLN 660

Query: 661 LISKKEAADSEVADDEARSFLVKMEPKFEPKMDPKLEQI 700
           LISKKEAADSEVADDEARSFLVKMEPKFEPKM+PKLEQI
Sbjct: 661 LISKKEAADSEVADDEARSFLVKMEPKFEPKMEPKLEQI 699

[Close]
BLAST of CmoCh06G011600 vs. ExPASy TrEMBL
Match: A0A6J1CZ82 (ATP-dependent DNA helicase 2 subunit KU80 OS=Momordica charantia OX=3673 GN=LOC111016125 PE=3 SV=1)

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 633/693 (91.34%), Postives = 660/693 (95.24%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIY+KYDEVGIVLFGT++TKNELT
Sbjct: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYNKYDEVGIVLFGTEDTKNELT 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
           EEVGGYQHVVVLQNMKVVDGDLVDVLK+LPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK
Sbjct: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKQLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KRLCLITDALFPIK+PYEGTKEDQV+ IAQQMTKHGMRMDSVVVR RFG DADEK+MDEN
Sbjct: 121 KRLCLITDALFPIKDPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGHDADEKIMDEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSI+PVTI+RG LEISS+IKIKVWVYKKTS
Sbjct: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGVLEISSIIKIKVWVYKKTS 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EEKFPTLKRYSDKAP TDKFATHEVKVDYEYKSAED SKVVPPEHRIKGYRYGPQV+PIS
Sbjct: 241 EEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSAEDPSKVVPPEHRIKGYRYGPQVVPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
           TAEWDAVKFKPEKSVKLLGFTNASNI+RHYYMKDVNVFIAEP NKRAIVAVSALARAMKE
Sbjct: 301 TAEWDAVKFKPEKSVKLLGFTNASNILRHYYMKDVNVFIAEPSNKRAIVAVSALARAMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
           MDKVAIVRCVWRQGQGSVVVGVLTPNISEK+GIADSLYFNVLPFAEDVREFQF SF+NFP
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLYFNVLPFAEDVREFQFSSFSNFP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           A MQPSEEQQEAAD+ VKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDP AAVP
Sbjct: 421 ASMQPSEEQQEAADDLVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPDAAVP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           PLD TLQKITEPDPDL SQ KS I TF RRFELKENPKLKK RR +LREKPSGSS+KEDN
Sbjct: 481 PLDVTLQKITEPDPDLFSQIKSIIDTFHRRFELKENPKLKKSRRRFLREKPSGSSEKEDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
           E+I AQIV SAAN   VKVEKIGDSTPLQDFEAMMSRRDSPEWI+KAIN MKNKIFDLVE
Sbjct: 541 EDIPAQIVDSAANPSAVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAINGMKNKIFDLVE 600

Query: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS 660
           NSCDGDNYPKALEYLLALRKGCIIEQEP QFNDFL HLCKFCL+ NLHSFCE LA ++L+
Sbjct: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPKQFNDFLHHLCKFCLKNNLHSFCEFLASKQLT 660

Query: 661 LISKKEAADSEVADDEARSFLVKMEPKFEPKMD 694
           LISK EA DSEVADDEAR+FLVK+EPK EPK++
Sbjct: 661 LISKVEAVDSEVADDEARNFLVKLEPKLEPKVE 693

[Close]
BLAST of CmoCh06G011600 vs. ExPASy TrEMBL
Match: A0A1S3AWC4 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo OX=3656 GN=LOC103483351 PE=3 SV=1)

HSP 1 Score: 1216.1 bits (3145), Expect = 0.0e+00
Identity = 614/689 (89.11%), Postives = 654/689 (94.92%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKL+Y+KYDEVGIVLFGT++TKNELT
Sbjct: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
           EEVGGYQHVVVLQNMKVVDGDLVDVLK++PRGTVSGDFLDAII+GMDMLIKKFGETE+GK
Sbjct: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKKFGETERGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KRLCL+TDALFPIKEPYEGTKEDQV+ IAQQMTKHG++MDSVVVR RFG+DA+EK M+EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDANEKTMNEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           D+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSI+PVTI+RGDLEISSVIKIKVWVYKKTS
Sbjct: 181 DLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EEKFPTLKRYSDKAP TDKFATHEVKVDYEYKSAE+ SKVVPPEHRIKGYRYGPQV+PIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRYGPQVVPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
           TAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKR+IVAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
           MDKVAIVRCVWRQGQGSVVVGVLTPNISEK+GIADSL+FNVLPFAEDVREFQFPSF+N P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           A MQPSEEQQEAAD+FVKMLDLAP GREEILQPDFTPNPVLERFYRHLELKSKDP AAVP
Sbjct: 421 AFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKSKDPDAAVP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           PLD TLQKITEPDPDL SQNK+ I TF RRFELKENPKLKK RR YLREK SGSSDKEDN
Sbjct: 481 PLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKASGSSDKEDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
           EEISAQIV S AN  +VKVEK+GDSTPL+DFEAMMSRRDSPEWI+KAIN MK+KIFDL+E
Sbjct: 541 EEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMKSKIFDLIE 600

Query: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS 660
           NS DGD+Y KA+EYL ALRKGCIIEQEP QFNDFLRHL  FC EKNLH+FCE LA +++S
Sbjct: 601 NSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCEFLASQQIS 660

Query: 661 LISKKEAADSEVADDEARSFLVKMEPKFE 690
           LISK+EAADSEVADDEAR F VKMEPK E
Sbjct: 661 LISKEEAADSEVADDEARRFWVKMEPKSE 689

[Close]
BLAST of CmoCh06G011600 vs. ExPASy TrEMBL
Match: A0A0A0L4D8 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis sativus OX=3659 GN=Csa_3G126130 PE=3 SV=1)

HSP 1 Score: 1186.8 bits (3069), Expect = 0.0e+00
Identity = 605/689 (87.81%), Postives = 644/689 (93.47%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKL+Y+KYDEVGIVLFGT++TKNELT
Sbjct: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
           EEVGGYQHVVVLQ MKVVDGDLVDVLK +PRGTVSGDFLDAIIVGMDMLIKKFGETE+GK
Sbjct: 61  EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KRLCL+TDALFPIKEPYEGTKEDQV+ IAQQMTKHG+RMDSVVVR RFG+DA EK M+EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           D+LLNIFS KTNAKMVYVESPTSLLGAIRTRSI+PVTI+RGDLEISSVIKIKVWVYKKTS
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EEKFPTLKRYSDKAP TDKFATHEVKVDYEYKSAE+ SKVVPPE RIKGYRYGPQV+PIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
           TAEWDAVKFK EKSVKLLGFTNA +IMRHYYMKDVNVFIAEPGNKR+IVAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
           MDKVAIVRCVWRQGQGSVVVGVLTPNISEK+GIADSL+FNVLPFAEDVREFQFPSF+N P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           ALMQPSEEQQEAAD+FVKMLDLAP GREEILQPDFTPNPVLERFYRHLE+KSKDP AAVP
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLEVKSKDPDAAVP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           PLD TLQKITEPDPDL SQN+S I TF +RFELKENPKLKK RR YLREK SGSSDKEDN
Sbjct: 481 PLDGTLQKITEPDPDLFSQNQSVINTFHKRFELKENPKLKKSRRHYLREKASGSSDKEDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
           EEISAQIV S AN   VKVEKIGD+TPL+DFEAMMSRRDSPEWI+KAI+ M +KIFDL++
Sbjct: 541 EEISAQIVESVANMPTVKVEKIGDTTPLEDFEAMMSRRDSPEWISKAISGMMSKIFDLIK 600

Query: 601 NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLS 660
           NS DG +Y KA+EYL ALRKGCIIEQEP QFNDFLRHL  F  EKNLH+FCE LA +++S
Sbjct: 601 NSSDGHSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFYPEKNLHTFCEFLASQQIS 660

Query: 661 LISKKEAADSEVADDEARSFLVKMEPKFE 690
           LISK+EAADSEV DDEAR F VKMEPK E
Sbjct: 661 LISKEEAADSEVGDDEARRFWVKMEPKSE 689

[Close]
BLAST of CmoCh06G011600 vs. TAIR 10
Match: AT1G48050.1 (Ku80 family protein )

HSP 1 Score: 832.4 bits (2149), Expect = 2.7e-241
Identity = 416/690 (60.29%), Postives = 532/690 (77.10%), Query Frame = 0 

Query: 1   MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT 60
           MARNRE LVLVLDVGP+M S+LP+VEK CSML++KKLIY+KYDEVGIV+FGT+ET NEL 
Sbjct: 1   MARNREGLVLVLDVGPAMRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60

Query: 61  EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK 120
            E+GGY++V VL+N++VVD    + +K+LPRGTV+GDFLDA+IVGMDMLIK +G   KGK
Sbjct: 61  REIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGK 120

Query: 121 KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFGRDADEKMMDEN 180
           KR+CLIT+A  P K+P+EGTK+DQVS IA +M   G++M+S+V+R     DA E++++EN
Sbjct: 121 KRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180

Query: 181 DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVIKIKVWVYKKTS 240
           D LL +FS    AK V V+SP SLLG+++TR ++PVT++RGDLEI+  +KIKVWVYKK +
Sbjct: 181 DHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240

Query: 241 EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSAEDTSKVVPPEHRIKGYRYGPQVIPIS 300
           EE+ PTLK YSDKAP TDKFA HEVKVDY+YK   ++++V+ PE RIKG+RYGPQVIPIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPIS 300

Query: 301 TAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE 360
             + + +KFK +K +KLLGFT ASNI+RHYYMKDVN+ + +P  +++++AVSA+AR MKE
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE 360

Query: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP 420
            +KVAIVRCVWR GQG+VVVGVLTPN+SE++   DS YFNVLPFAEDVREF FPSFN  P
Sbjct: 361 TNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420

Query: 421 ALMQPSEEQQEAADEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP 480
           +  +P E+QQ  AD  VKMLDLAPS  EE+L+PD TPNPVL+RFY +LELKSK   A +P
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKSKSTDATLP 480

Query: 481 PLDATLQKITEPDPDLLSQNKSGIGTFDRRFELKENPKLKKPRRLYLREKPSGSSDKEDN 540
           P+D T +++ E DP+L S NKS + TF   FE+KENPKLKK  +  LR+KPSGS D EDN
Sbjct: 481 PMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPSGSDD-EDN 540

Query: 541 EEISAQIVVSAANTRLVKVEKIGDSTPLQDFEAMMSRRDSPEWINKAINEMKNKIFDLVE 600
             I+        + +  K++ +GD+ P+QDFEAM+SRRD  +W  KAI +MKN I  LVE
Sbjct: 541 RMIT-------YDAKENKIDIVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLVE 600

Query: 601 NSCD-GDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERL 660
           N  D GD   KALE +LALRKGC++EQEP QFN+FL HL K C E+NL    E    +++
Sbjct: 601 NCTDEGD---KALECVLALRKGCVLEQEPKQFNEFLNHLFKLCQERNLSHLLEHFMSKKI 660

Query: 661 SLISKKEAADSEVADDEARSFLVKMEPKFE 690
           +LI K EAADS++ D+ A  F+VK E   E
Sbjct: 661 TLIPKSEAADSDIVDENAGDFIVKQESMLE 679

The following BLAST results are available for this feature:
BLAST of CmoCh06G011600 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FQ093.8e-24060.29ATP-dependent DNA helicase 2 subunit KU80 OS=Arabidopsis thaliana OX=3702 GN=KU8... [more]
Q75IP63.6e-23560.47ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza sativa subsp. japonica OX=399... [more]
Q54LY56.7e-8028.88X-ray repair cross-complementing protein 5 OS=Dictyostelium discoideum OX=44689 ... [more]
P276415.4e-4524.76X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=... [more]
P130107.0e-4525.20X-ray repair cross-complementing protein 5 OS=Homo sapiens OX=9606 GN=XRCC5 PE=1... [more]
BLAST of CmoCh06G011600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F3H80.0e+00100.00ATP-dependent DNA helicase 2 subunit KU80 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1IFE50.0e+0097.57ATP-dependent DNA helicase 2 subunit KU80 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1CZ820.0e+0091.34ATP-dependent DNA helicase 2 subunit KU80 OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A1S3AWC40.0e+0089.11ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo OX=3656 GN=LOC10348335... [more]
A0A0A0L4D80.0e+0087.81ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis sativus OX=3659 GN=Csa_3G12... [more]
BLAST of CmoCh06G011600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G48050.12.7e-24160.29Ku80 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006164Ku70/Ku80 beta-barrel domainSMARTSM00559ku_4coord: 278..419
e-value: 1.8E-35
score: 133.8
IPR006164Ku70/Ku80 beta-barrel domainPFAMPF02735Kucoord: 227..431
e-value: 4.8E-42
score: 143.9
IPR014893Ku, C-terminalPFAMPF08785Ku_PK_bindcoord: 566..681
e-value: 2.6E-35
score: 121.2
IPR036494Ku, C-terminal domain superfamilyGENE3D1.25.40.240coord: 533..685
e-value: 6.2E-38
score: 131.6
IPR036494Ku, C-terminal domain superfamilySUPERFAMILY101420C-terminal domain of Ku80coord: 547..685
IPR005160Ku70/Ku80 C-terminal armPFAMPF03730Ku_Ccoord: 452..525
e-value: 7.8E-6
score: 26.5
IPR016194SPOC-like, C-terminal domain superfamilyGENE3D2.40.290.10coord: 216..418
e-value: 2.3E-57
score: 195.9
IPR016194SPOC-like, C-terminal domain superfamilySUPERFAMILY100939SPOC domain-likecoord: 215..518
IPR005161Ku70/Ku80, N-terminal alpha/betaPFAMPF03731Ku_Ncoord: 8..157
e-value: 1.2E-12
score: 48.0
IPR024193Ku80PIRSFPIRSF016570Ku80coord: 1..684
e-value: 7.7E-212
score: 703.3
IPR024193Ku80CDDcd00873KU80coord: 216..517
e-value: 6.43542E-99
score: 304.598
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 1..202
e-value: 5.5E-52
score: 178.4
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 4..231
NoneNo IPR availableGENE3D1.10.1600.10coord: 423..519
e-value: 1.4E-17
score: 65.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..541
NoneNo IPR availablePANTHERPTHR12604KU AUTOANTIGEN DNA HELICASEcoord: 4..670
NoneNo IPR availablePANTHERPTHR12604:SF4X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5coord: 4..670

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G011600.1CmoCh06G011600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071480 cellular response to gamma radiation
biological_process GO:0071481 cellular response to X-ray
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006310 DNA recombination
biological_process GO:0006303 double-strand break repair via nonhomologous end joining
biological_process GO:0009408 response to heat
biological_process GO:0000723 telomere maintenance
cellular_component GO:0043564 Ku70:Ku80 complex
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0042162 telomeric DNA binding
molecular_function GO:0003677 DNA binding