CmoCh06G011590 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G011590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Proteasome subunit beta
Location	Cmo_Chr06: 8889395 .. 8894187 (+)
RNA-Seq Expression	CmoCh06G011590
Synteny	CmoCh06G011590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAAGCGAGCAAGTTTTTGCTTTGGCTTTGTTGGGTTCCTCTTCTCTCAGACGCCTTCGCTTTTCTCTGACCTCTTCGCCATGACGAAGCAGCAAGCCAACTGGTCTCCCTACGACAACAATGGCGGGTACTTTCTCTTTCCTTTTCATTCTCTATGCACTGTTTAGATGTTTATTTTATCTGTTTCGGTGATGAATCAGTGCCGAACTTTGTGCAGATCGTGTGTTGCGATTGCCGGCGCCGATTACTGTGTAATCGCCGCTGATACTCGGTTGTCTACGGGTTACAATATCCTCACTCGTGATTACTCCAAAATTTGTAAGCTGTACGTCAATCTCTTGTCGAATTTAAGTTTCTTTCCGAATTTGAATTCTTAAGGTTACTGGAGTTTCACATTGGTTTTATGTTTTGTTTTTTTTTTCTCATGTGTGTTAGAAATGGATTATTTCCCCTCTTATAGTGTTTCTTTCCTTCCTGGAAATTTTATTGGGCTTCGGGTTTTATGGCTATTGCTTGGGGATAGACTTCTGGATTCTAGAGTTAACTCAGGGTCATAGTTTGGTGGACTTTGAACGAAATGAGCGGTTACTTTTGTTGTTTTGAAGATTGTGCTTTGGTGTGTGATAATATGTGGATTAGCTTGTGAATGAAATTGGTGCCAACTTACATGGAGTTGGCAGCTGTTGAACTTAAAAATTTGGTCATTTCGTGCTTTTGTTTGGGAGGTTTCGGTTTTGCCTCGGAAGAGTTATGGATCCATTGGCGGTGTCGAGGAAAGGTTATGAAAGTAATGGAGATGCATTCTTTTGGGAGGGATGGATCTGTTGGATGCCGAGTTTATTACATGTGATTTTGTGTTTATTTGAAAAATGATTTAGGAGGCAAATTATCACGTAAATCCTACCTTTAGTTCAAGGAACAAAATGGTTTATGATACTTCTAATTGGTCAGAGATATTACTAAATTTAGAATGTTATTCAAGTGGCCGATATAAGTGTCTAATGTTATGTATTCTTTTGTTATATTACGCCATAGTCATTTGATTTCCTCAATTTGGTCACGATAGATTTCCTCATATTTTGTTATTGAACTTCACTAATATAAATCCTGATCACTAATTCCACTACAAGAGTTTCATGTTATGCATTTTTGATTTCATTGTTGTGATGTTACTAGTATACATCACATACGTAAAAGCTCATGCATCCACGCACGTGCTTATTTATAATTCTTGGTGTTGCAGGGCCGACAAAGCTGTGATGGCTTCCTCTGGTTTTCAAGCTGATGTGAAAGCCTTACAAAAGGTTTTGTCTGCTAGGCATTTGGTGAGACTTTTATCTAAATGGACATGTCTTCCATGGTTGATCTTTGTAATGCATATTGGCCATATGCTATGTTATAAGATTTATTTCCAAGCCATTGAGTTTTTGATGCACCTAATTGTTCTTATTTTCTTTGAGTTTGATTGTGTGTGGGTTACTCATTTCCTTCTTGTGATTTTGATATCTGTTTTTGTAGCTTTGCTTGTATTAGGCTTGGATTATTGTGTATGTATCATGTACTTCACTTCATATTGCTGCTGCTGCATCCCTTAAAATTGGGATAGCATGGCTTTAATGATTTCCGACACCCGTGCTTCCCCAATGGCACTTTGTTCCTCTCCTTTTATATGTAGTTTTCAACGAAAATATGGTGTTTTGATCTTATAATGATTTTAGAGTGAAGAGACTCGAACTTCTCTTTTTGTGTTTTTCTATTCGGTAATGTTTTTTCTTTAACTTATTTCGTGTTCATTTTAGTATTTTTGCCATTTTCCGTGTTGGGTTTCTGATCCTAGTCTTTCATTGCGCAAACTAGTGTTGTTCATAATGGAACCCCATTTTTCTTTTAAAAAATATGTACAAGGCTTGCTTCGAAAATGGAATTGAACTTTGTGGTGTAAAATCTACTTCGACTCTCAATTACACTAATTTGGGAGAAGCCAATGGTTAAAGCATCCTGACAATTCAGTTTTTAAATTTATAATGTATTTTATGGACATAAGATCCGGGTCGGAGGATTGATATGTAATTCTTTATTTTGATGCCTTATATGTTACTTGCTTGACTTTCAGACCTACCAACATCAGCACAACAAGCAAATGAGCTGCCCGGCAATGGCTCAACTGCTCTCAAATACATTGTACTTCAAACGTTTCTTTCCTTATTATGCTTTTAATGTCTTGGGCGGACTTGATAATGAAGGTATATGACTTCCCTGCTTGTGGTTCCAGTTTTATACCTCACTTTCCCATTAACTATAAGTTATTCTCTTCTTGAAACAGGAAAGGGTTGTGTGTTCACCTATGATGCTGTTGGTTCTTATGAGAGAGTTGGATACAGTGCTCAGGGTTCGGGTTCCACCCTCATTACACCCTTTTTAGATAACCAACTGAAGTCTCCCAGCCCTCTATTATTGCCTGCGCAGGTATGATCTTACCCTTCCTTCGTAGGAATGTGCATGGAAATTACATATTGGTTCACAAAAAATAAAAGTTCGTGTCGAAGATGGTTCCCCCCTTTCGAAAACTGAGCTGACTGCTTGGCAAAAATAGACGAACTAATTGATTCCAAACTGGATCAAATAGTTTCTTTTTTTTCTTTTTGTTTTATACCTTTGAAATGGATAAGAATAGTGACAAAAAATCGCTGGGAGTAAGAAACCTGGAAATTCTCCGTTATAGGCATTAAAGAGGGGAAAAACATATCAAACTTAGACATTCAAGTGTTCTGATCTCTCCGAAAATATGTTTGTCCCGCAATCCGTGTAGCACTCCTTTATACTTATGATACAAAGCCTAACCGAAAGGGAGCCCATTTGTAATAGCCAAAGCTCACCGCTAGCAGATATTGTTCTCTTTGAATTTCTCCTCAAGGTTTTTAAAATGCCTCTACTAGGGAGAGGTTTCCTCACCCTTATAAAGAATGCTTGGTTCTCCTTCTCAACAATGTGGGACCTCACAATCCACCCCCTTCGGGGCCCAGTGTCCTCGCTAACACTCGTTCCCTTCTCCAATCAATGTGGGATCCCCCAATTCACCCCCTTCGAGGCTCTGCCTCCTCGCTGGCACATTGCCCGGTGTCTGGCTCTGATCCAACTGTAATAGTCCTAGCCCACGGCTAGCAAATATTGTTCTTTTTGGGTTTCCCCGTAAGGTTTGTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTGGTTCTCCTTCCCAACGACGTGGGATCTCACAATCCACCCTCCTTCGGGGCCCAGTGTCCTCGCTAACACTCGTTCCTTTCTCCAATCAATGTGGGATCCCCCAATTCACCCCCTTCAAGGCTCAGTCTCCTCGCTGGCACATTGCCCGGTGTCTGGCTCTGATACCAACTGTAATGGTCCAAGCCCACCGCTAGCAAATATTGTTCTTTTTGGACTTCTCCTTCCGAGCTTCACCTCAAGGTTTTTAAAACGCGTATGGTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTGGTTCTCCTCCCCAACTGACGTGGGATCTCGCACCATTGATCCCCAAGCAAATAACACCAATTTTTTCTCTCTATCCTCTAACTTATATGCTCCCCCTCGTGTCCCTCTTTTGCATACGAGAGGTTTACTTTGCCTATCTGGTATAGTTCAAAGTTCCAACCAACTGATCCAGCTCTTTCCAGTTGATTTTGTTATTTTTTTGATTTTGGCTTGCCCTCCTATTTTCTCCCCCTTGGAATCTCTCTCTCAGCTAACAAATTGCGATGAACAGGATTCTGCAACGCCTCTTTCAGAAGCCGAAGCTATTGACCTGGTGAAAACTGTTTTTGCATCTGCTACTGAGAGAGATATCTACACTGTAATTCTCTTCCACTATTCATATACACCTTATTCTGAGCAAGTATCTTTACAGATTCCAACTCTCAATTTTTTTATGTTCATAGGGTGACAAACTCGAAATCGTCATTCTTAATGCCGACGGTATTCGACGTGAATACTTGGACCTCCGAAAAGATTAGCAGCACGGTGCTCGACTTGATAGATTGAATGTTGCTGCAACCGTAGGAACCGCCCATCAGTACCCGTCCCTGAGATTATTGCATTGCGATATTTACGGATGGTTAAGTTTTAGTTTTCTCTCTGTGATGTGACCTCGTTTCCAAATTAAAATCCCTGTTGTGAACTAAAATCTGGAGGGCTGCTGGCTGATATTGATCGATCGATCTCCTTTTTTTTTTTTTTTAGCTACCGTTGACTTTAAGGAGTTGTTTTAGTGGTGAGTTCATGAGAAGCTGGATTTGAATCTTAGGTTTAATTAATTGAAGCTAGGTGGCATATGGTCTTCAAAAAGTTAAAATATCATATTCTTGGTTAAAATATTCGAGATTTAAATTCTCGTTCTACACTATCTGTTTATTTAGTTCTATACCCCCGAGAGTTGTGATGGTGTGGGAAAAATGGAGCCTAAAGAACCTCGTTTGGGACCGGAAGGGTCCCTCATGTTTCATATTGGCTGGAAATTTGTTCAAAAATGTTATCGCATCTCCTTTTTAGGCGGGAGTTCAAAGATGTTTATGCTTGCATTCCATGCCGTGTTTCCCTGTTTGAGACCATTTTCTATTAGCTCGGTCATGAACCACACTGGTTGGATCCTAAAAGAAATAGCATTTCGTCAACGTCGAAATTGAGTTGCATACTGGGTCAAACTTTCTTTCACCTATTTATTCAAACATGGTAAACTCG

mRNA sequence

AGAAAAGAAGCGAGCAAGTTTTTGCTTTGGCTTTGTTGGGTTCCTCTTCTCTCAGACGCCTTCGCTTTTCTCTGACCTCTTCGCCATGACGAAGCAGCAAGCCAACTGGTCTCCCTACGACAACAATGGCGGATCGTGTGTTGCGATTGCCGGCGCCGATTACTGTGTAATCGCCGCTGATACTCGGTTGTCTACGGGTTACAATATCCTCACTCGTGATTACTCCAAAATTTGTAAGCTGGCCGACAAAGCTGTGATGGCTTCCTCTGGTTTTCAAGCTGATGTGAAAGCCTTACAAAAGACCTACCAACATCAGCACAACAAGCAAATGAGCTGCCCGGCAATGGCTCAACTGCTCTCAAATACATTGTACTTCAAACGTTTCTTTCCTTATTATGCTTTTAATGTCTTGGGCGGACTTGATAATGAAGTTTTATACCTCACTTTCCCATTAACTATAAGTTATTCTCTTCTTGAAACAGGAAAGGGTTGTGTGTTCACCTATGATGCTGTTGGTTCTTATGAGAGAGTTGGATACAGTGCTCAGGGTTCGGGTTCCACCCTCATTACACCCTTTTTAGATAACCAACTGAAGTCTCCCAGCCCTCTATTATTGCCTGCGCAGCTAACAAATTGCGATGAACAGGATTCTGCAACGCCTCTTTCAGAAGCCGAAGCTATTGACCTGGTGAAAACTGTTTTTGCATCTGCTACTGAGAGAGATATCTACACTGGTGACAAACTCGAAATCGTCATTCTTAATGCCGACGGTATTCGACGTGAATACTTGGACCTCCGAAAAGATTAGCAGCACGGTGCTCGACTTGATAGATTGAATGTTGCTGCAACCGTAGGAACCGCCCATCAGTACCCGTCCCTGAGATTATTGCATTGCGATATTTACGGATGGTTAAGTTTTAGTTTTCTCTCTGTGATGTGACCTCGTTTCCAAATTAAAATCCCTGTTGTGAACTAAAATCTGGAGGGCTGCTGGCTGATATTGATCGATCGATCTCCTTTTTTTTTTTTTTTAGCTACCGTTGACTTTAAGGAGTTGTTTTAGTGGTGAGTTCATGAGAAGCTGGATTTGAATCTTAGGTTTAATTAATTGAAGCTAGGTGGCATATGGTCTTCAAAAAGTTAAAATATCATATTCTTGGTTAAAATATTCGAGATTTAAATTCTCGTTCTACACTATCTGTTTATTTAGTTCTATACCCCCGAGAGTTGTGATGGTGTGGGAAAAATGGAGCCTAAAGAACCTCGTTTGGGACCGGAAGGGTCCCTCATGTTTCATATTGGCTGGAAATTTGTTCAAAAATGTTATCGCATCTCCTTTTTAGGCGGGAGTTCAAAGATGTTTATGCTTGCATTCCATGCCGTGTTTCCCTGTTTGAGACCATTTTCTATTAGCTCGGTCATGAACCACACTGGTTGGATCCTAAAAGAAATAGCATTTCGTCAACGTCGAAATTGAGTTGCATACTGGGTCAAACTTTCTTTCACCTATTTATTCAAACATGGTAAACTCG

Coding sequence (CDS)

ATGACGAAGCAGCAAGCCAACTGGTCTCCCTACGACAACAATGGCGGATCGTGTGTTGCGATTGCCGGCGCCGATTACTGTGTAATCGCCGCTGATACTCGGTTGTCTACGGGTTACAATATCCTCACTCGTGATTACTCCAAAATTTGTAAGCTGGCCGACAAAGCTGTGATGGCTTCCTCTGGTTTTCAAGCTGATGTGAAAGCCTTACAAAAGACCTACCAACATCAGCACAACAAGCAAATGAGCTGCCCGGCAATGGCTCAACTGCTCTCAAATACATTGTACTTCAAACGTTTCTTTCCTTATTATGCTTTTAATGTCTTGGGCGGACTTGATAATGAAGTTTTATACCTCACTTTCCCATTAACTATAAGTTATTCTCTTCTTGAAACAGGAAAGGGTTGTGTGTTCACCTATGATGCTGTTGGTTCTTATGAGAGAGTTGGATACAGTGCTCAGGGTTCGGGTTCCACCCTCATTACACCCTTTTTAGATAACCAACTGAAGTCTCCCAGCCCTCTATTATTGCCTGCGCAGCTAACAAATTGCGATGAACAGGATTCTGCAACGCCTCTTTCAGAAGCCGAAGCTATTGACCTGGTGAAAACTGTTTTTGCATCTGCTACTGAGAGAGATATCTACACTGGTGACAAACTCGAAATCGTCATTCTTAATGCCGACGGTATTCGACGTGAATACTTGGACCTCCGAAAAGATTAG

Protein sequence

MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMASSGFQADVKALQKTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRREYLDLRKD

Homology

[Close]

BLAST of CmoCh06G011590 vs. ExPASy Swiss-Prot
Match: O82531 (Proteasome subunit beta type-1 OS=Petunia hybrida OX=4102 GN=PBF1 PE=2 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.3e-103
Identity = 195/247 (78.95%), Postives = 207/247 (83.81%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQQANWSPYDNNGG+CVA+AGADYCVIAADTR+STGYNILTRDYSKI KLADK VMAS
Sbjct: 1   MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMAS 60

Query: 61  SGFQADVKALQKT-------YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADV+ALQK        YQHQHNKQMSCPAM QLLSNTLY+KRFFPYY+FNVLGGLD
Sbjct: 61  SGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
           +E                 GKGCVFTYDAVGSYERVGYS+QGSGSTLI PFLDNQLKSPS
Sbjct: 121 SE-----------------GKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLPA       QD+ TPLSEAEAIDLVKT FASATERDIYTGD+LEIVILNA GIRRE
Sbjct: 181 PLLLPA-------QDAVTPLSEAEAIDLVKTCFASATERDIYTGDRLEIVILNASGIRRE 223

[Close]

BLAST of CmoCh06G011590 vs. ExPASy Swiss-Prot
Match: P42742 (Proteasome subunit beta type-1 OS=Arabidopsis thaliana OX=3702 GN=PBF1 PE=1 SV=2)

HSP 1 Score: 370.5 bits (950), Expect = 1.4e-101
Identity = 193/247 (78.14%), Postives = 206/247 (83.40%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQ ANWSPYDNNGG+CVAIAG+DYCVIAADTR+STGY+IL+RDYSKI KLAD+AV++S
Sbjct: 1   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 60

Query: 61  SGFQADVKALQKT-------YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK        YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
            E                 GKGCVFTYDAVGSYERVGY AQGSGSTLI PFLDNQLKSPS
Sbjct: 121 EE-----------------GKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLP       +QDS TPLSEAEA+DLVKTVFASATERDIYTGDKLEI+IL ADGI+ E
Sbjct: 181 PLLLP-------KQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTE 223

[Close]

BLAST of CmoCh06G011590 vs. ExPASy Swiss-Prot
Match: O64464 (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PBF1 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.8e-91
Identity = 172/237 (72.57%), Postives = 190/237 (80.17%), Query Frame = 0


Query: 11  YDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMASSGFQADVKAL 70
           Y+NNGG+CVAIAGADYCV+AADTRLS GYNILTRD+SKIC+LADK  +ASSGFQ D+KAL
Sbjct: 9   YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKAL 68

Query: 71  QKT-------YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNEVLYLTFPL 130
            K        YQHQHNK+MSCPAMAQLLSNTLY+KRFFPYYAFNVLGGLD+E        
Sbjct: 69  HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE-------- 128

Query: 131 TISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQLTN 190
                    GKGCVFTYDAVGSYER GYSAQG+GS LI P LDNQLKSPSPLLLPA    
Sbjct: 129 ---------GKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPA---- 188

Query: 191 CDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRREYLDLRKD 241
              +D+ TPLSE EA+DLVK VFASATERDIYTGDKLEIV++N  G +REY+DLRKD
Sbjct: 189 ---RDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221

[Close]

BLAST of CmoCh06G011590 vs. ExPASy Swiss-Prot
Match: Q86A21 (Proteasome subunit beta type-1 OS=Dictyostelium discoideum OX=44689 GN=psmB1 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-47
Identity = 107/238 (44.96%), Postives = 148/238 (62.18%), Query Frame = 0


Query: 11  YDNNGGSCVAIAGADYCVIAADTRLST-GYNILTRDYSKICKLADKAVMASSGFQADVKA 70
           Y +NGG+ +A+AG DYCVIA DTR+S  GY I TR Y+KI +L  K V+A+SG QAD  A
Sbjct: 26  YVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIA 85

Query: 71  LQK-------TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNEVLYLTFP 130
           LQK       +++ +H K MS PA+AQ LSNTLY+KRFFPYY FN++ G+D         
Sbjct: 86  LQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVD--------- 145

Query: 131 LTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQLT 190
                   E G+G ++TYDAVGS+ERV YS+QGSG+ L+ P LDNQ+   +  ++     
Sbjct: 146 --------EQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIV----- 205

Query: 191 NCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRREYLDLRKD 241
                +    +S  + +  VK    SA ERDIYTGD  +IV+++ +G+  E  +L+ D
Sbjct: 206 -----EGNKDVSCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236

[Close]

BLAST of CmoCh06G011590 vs. ExPASy Swiss-Prot
Match: Q9IB84 (Proteasome subunit beta type-1-A OS=Carassius auratus OX=7957 GN=psmb1-A PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-47
Identity = 104/240 (43.33%), Postives = 143/240 (59.58%), Query Frame = 0


Query: 8   WSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMASSGFQAD- 67
           +SPY  NGG+ +A+AG D+ ++A+DTRLS GY+I +RD  K  KL D  V+  SGF  D 
Sbjct: 27  FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 86

Query: 68  ------VKALQKTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNEVLYLT 127
                 ++A  K Y+H +NK M+  A+A +LS  LY +RFFPYY +N++GGLD E     
Sbjct: 87  LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE----- 146

Query: 128 FPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQ 187
                       G+G V+++D VGSY+R  Y A GS S ++ P LDNQ+   +       
Sbjct: 147 ------------GRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNM------ 206

Query: 188 LTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRREYLDLRKD 241
                E     PLS+ +A+ LVK VF SA ERD+YTGD L+I I+  +GIR E + LRKD
Sbjct: 207 -----ENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238

[Close]

BLAST of CmoCh06G011590 vs. ExPASy TrEMBL
Match: A0A6J1IGT1 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472752 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.6e-111
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60

Query: 61  SGFQADVKALQK-------TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK       TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
           NE                 GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS
Sbjct: 121 NE-----------------GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLPA       QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE
Sbjct: 181 PLLLPA-------QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 223

[Close]

BLAST of CmoCh06G011590 vs. ExPASy TrEMBL
Match: A0A6J1IZ68 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111479776 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.6e-111
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60

Query: 61  SGFQADVKALQK-------TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK       TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLAARHLTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
           NE                 GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS
Sbjct: 121 NE-----------------GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLPA       QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE
Sbjct: 181 PLLLPA-------QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 223

[Close]

BLAST of CmoCh06G011590 vs. ExPASy TrEMBL
Match: A0A6J1FPP2 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111447663 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.6e-111
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60

Query: 61  SGFQADVKALQK-------TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK       TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
           NE                 GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS
Sbjct: 121 NE-----------------GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLPA       QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE
Sbjct: 181 PLLLPA-------QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 223

[Close]

BLAST of CmoCh06G011590 vs. ExPASy TrEMBL
Match: A0A6J1EG74 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432207 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.6e-111
Identity = 216/247 (87.45%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60

Query: 61  SGFQADVKALQK-------TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK       TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLAARHLTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
           NE                 GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS
Sbjct: 121 NE-----------------GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLPA       QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE
Sbjct: 181 PLLLPA-------QDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 223

[Close]

BLAST of CmoCh06G011590 vs. ExPASy TrEMBL
Match: A0A5D3D235 (Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003970 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.5e-109
Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60

Query: 61  SGFQADVKALQK-------TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK       TYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
           +E                 GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS
Sbjct: 121 SE-----------------GKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLPA       QDS+TPLSEAEAIDLVKTVFASATERDIYTGDKLEIV+LNADG+RRE
Sbjct: 181 PLLLPA-------QDSSTPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLRRE 223

[Close]

BLAST of CmoCh06G011590 vs. TAIR 10
Match: AT3G60820.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 370.5 bits (950), Expect = 9.9e-103
Identity = 193/247 (78.14%), Postives = 206/247 (83.40%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQ ANWSPYDNNGG+CVAIAG+DYCVIAADTR+STGY+IL+RDYSKI KLAD+AV++S
Sbjct: 1   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 60

Query: 61  SGFQADVKALQKT-------YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK        YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
            E                 GKGCVFTYDAVGSYERVGY AQGSGSTLI PFLDNQLKSPS
Sbjct: 121 EE-----------------GKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLP       +QDS TPLSEAEA+DLVKTVFASATERDIYTGDKLEI+IL ADGI+ E
Sbjct: 181 PLLLP-------KQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTE 223

[Close]

BLAST of CmoCh06G011590 vs. TAIR 10
Match: AT3G60820.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 370.5 bits (950), Expect = 9.9e-103
Identity = 193/247 (78.14%), Postives = 206/247 (83.40%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQ ANWSPYDNNGG+CVAIAG+DYCVIAADTR+STGY+IL+RDYSKI KLAD+AV++S
Sbjct: 1   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 60

Query: 61  SGFQADVKALQKT-------YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK        YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
            E                 GKGCVFTYDAVGSYERVGY AQGSGSTLI PFLDNQLKSPS
Sbjct: 121 EE-----------------GKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLP       +QDS TPLSEAEA+DLVKTVFASATERDIYTGDKLEI+IL ADGI+ E
Sbjct: 181 PLLLP-------KQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTE 223

[Close]

BLAST of CmoCh06G011590 vs. TAIR 10
Match: AT3G60820.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 365.2 bits (936), Expect = 4.2e-101
Identity = 191/247 (77.33%), Postives = 205/247 (83.00%), Query Frame = 0


Query: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMAS 60
           MTKQ ANWSPYDNNGG+CVAIAG+DYCVIAADTR+STGY+IL+RDYSKI KLAD+AV++S
Sbjct: 1   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 60

Query: 61  SGFQADVKALQKT-------YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
           SGFQADVKALQK        YQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120

Query: 121 NEVLYLTFPLTISYSLLETGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPS 180
            E                 GKGCVFTYDAVGSYERVGY AQGSGSTLI PFLDNQLKSPS
Sbjct: 121 EE-----------------GKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPS 180

Query: 181 PLLLPAQLTNCDEQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRRE 240
           PLLLP       +QDS TPLSEAEA+DLVKTVFASATERDIYT +KLEI+IL ADGI+ E
Sbjct: 181 PLLLP-------KQDSNTPLSEAEAVDLVKTVFASATERDIYTVNKLEIMILKADGIKTE 223

[Close]

BLAST of CmoCh06G011590 vs. TAIR 10
Match: AT1G21720.1 (proteasome beta subunit C1 )

HSP 1 Score: 62.4 bits (150), Expect = 5.8e-10
Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 9   SPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMASSGFQADVK 68
           S ++ NG + VA+ G +   IA+D RL      +  D+ +I K+ D+  +  SG   DV+
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQ 61

Query: 69  AL-------QKTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNE 116
            L        K YQ +  + M     A L+S  LY KRF PY    V+ GL ++
Sbjct: 62  TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDD 115

[Close]

BLAST of CmoCh06G011590 vs. TAIR 10
Match: AT1G77440.1 (20S proteasome beta subunit C2 )

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-09
Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 0


Query: 9   SPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMASSGFQADVK 68
           S ++ NG + VA+ G +   IA+D RL      +  D+ +I K+ D   +  SG   DV+
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQ 61

Query: 69  AL-------QKTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNE 116
            L        K YQ +  + M     A L+S  LY KRF P+    V+ GL ++
Sbjct: 62  TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDD 115

The following BLAST results are available for this feature:

BLAST of CmoCh06G011590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82531	3.3e-103	78.95	Proteasome subunit beta type-1 OS=Petunia hybrida OX=4102 GN=PBF1 PE=2 SV=1	[more]
P42742	1.4e-101	78.14	Proteasome subunit beta type-1 OS=Arabidopsis thaliana OX=3702 GN=PBF1 PE=1 SV=2	[more]
O64464	3.8e-91	72.57	Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PBF1 ...	[more]
Q86A21	2.0e-47	44.96	Proteasome subunit beta type-1 OS=Dictyostelium discoideum OX=44689 GN=psmB1 PE=...	[more]
Q9IB84	4.4e-47	43.33	Proteasome subunit beta type-1-A OS=Carassius auratus OX=7957 GN=psmb1-A PE=2 SV...	[more]

BLAST of CmoCh06G011590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IGT1	7.6e-111	87.45	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472752 PE=3 SV=1	[more]
A0A6J1IZ68	7.6e-111	87.45	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111479776 PE=3 SV=1	[more]
A0A6J1FPP2	7.6e-111	87.45	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111447663 PE=3 SV=1	[more]
A0A6J1EG74	7.6e-111	87.45	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432207 PE=3 SV=1	[more]
A0A5D3D235	2.5e-109	85.43	Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh06G011590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60820.1	9.9e-103	78.14	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G60820.3	9.9e-103	78.14	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G60820.2	4.2e-101	77.33	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT1G21720.1	5.8e-10	32.46	proteasome beta subunit C1	[more]
AT1G77440.1	4.9e-09	31.58	20S proteasome beta subunit C2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 13..171 e-value: 1.5E-18 score: 67.0
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 8..240 e-value: 5.3E-56 score: 191.6
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 9..239
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 4..240
None	No IPR available	PANTHER	PTHR11599:SF170	PROTEASOME SUBUNIT BETA	coord: 4..240
None	No IPR available	CDD	cd03757	proteasome_beta_type_1	coord: 8..240 e-value: 1.51528E-120 score: 340.005
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 19..66
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 15..225 score: 35.127068

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G011590.1	CmoCh06G011590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity