CmoCh06G010740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G010740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	acidic endochitinase-like
Location	Cmo_Chr06: 8318856 .. 8320236 (+)
RNA-Seq Expression	CmoCh06G010740
Synteny	CmoCh06G010740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCCGACGCCGAGCTCTCCTCCTCTGCATCATGGTTTTGACGTTAATGGCGAAATCCAATGCTGGGAAGATAGCTATTTATTGGGGTCAAAATGGAAATGAAGGCACTTTGGCTGACACCTGCGCCACCGGAAACTACCAGATTGTTATCCTTGCTTTTCTCTCCGTCTTCGGCAACGGCCAGACGCCGCAGATCAACCTCGCCGGCCACTGCGACCCCTTTAGTAATGGATGCACTAAATTGAGCTCCGACGTCAAGTCGTGCCAAGCTAGAGGCATCAAGGTGATTATATTATATTATTCAATTAGGTTTATTTAATCATTTTAGGCTCGTGGTCAGTTAGATAAATGGGGCGAACCCGATTATATTTTCCGTCCCTACCCGCGAACGTTTTATATATATATATATAGTTCCCCTTAACGATTTAATAAAACTATTTTATAATTTTTTAAATAAATATTATACTAAAAAAAATTGTTACATATTTCTTGGGAATTCGAGAATAGGATTTTCCATTTTTATAATATATATAGTTTTGTAAAAATTATTTTAATGAATTTTTAATGGACCATAAGAATTTTTATTAAAAAGAAAATTAATATACTAATAAATTTAATAATATTTTATAATAAAAAAAATTAATGAATTTTTATTAAAAAAAATATAATATCCTAATAAATTCAATAATATTTTATATAATAATAATAATAATAATAAGACTGAAATATCTCTTTCAATTCTCTCTCCCATACTAATTTCATAATAGGTTATCCTTTCGATCGGAGGCGGCGTGGGGAGCTACTTCCTCTCATCCACCGATGACGCCAAAAAAGTTGCAGACTACCTATGGAACAACTATTTAGGCGGACATTCCCCGTCCTCGCCTCGTCCCCTCGGCAATGTCGTGCTCGACGGTGTCGACTTCGACATCGAAGGCGGGACAAACAAGCATTGGGACGAGCTCGCAAGGGCTCTTTTGGACTTCGGCAACCGAAACGGCAAGAAGGTATTCATCACGGCTGCTCCACAGTGCCCTTTCCCCGACGCCTGGCTCGGCGACGCGCTAACAACAGGTCTTTTCGACTTCGTTTGGGTTCAATTCTACAACAACCCACCATGTCAATTTTCAGGAGATGGCACCAATCTTTTTGACGCTTGGAAGGTATGGACTTCCAAAATTCCTCATGCACAAATCTTCTTGGGCCTCCCGGCGGCTCCGGCGGCTGCCGGCTCTGGGTTCATTCCGGCTGATACTCTCAAATCGGTGGTGCTACCAGTCGTCAAACACTCACCTAAGTACGGCGGCGTTATGCTGTGGTCGAAGTTTTATGATGATCAAACTGGCTATAGCTCTTCCATTAAACACGCTGTTTGA

mRNA sequence

ATGGAGTTCCGACGCCGAGCTCTCCTCCTCTGCATCATGGTTTTGACGTTAATGGCGAAATCCAATGCTGGGAAGATAGCTATTTATTGGGGTCAAAATGGAAATGAAGGCACTTTGGCTGACACCTGCGCCACCGGAAACTACCAGATTGTTATCCTTGCTTTTCTCTCCGTCTTCGGCAACGGCCAGACGCCGCAGATCAACCTCGCCGGCCACTGCGACCCCTTTAGTAATGGATGCACTAAATTGAGCTCCGACGTCAAGTCGTGCCAAGCTAGAGGCATCAAGGTTATCCTTTCGATCGGAGGCGGCGTGGGGAGCTACTTCCTCTCATCCACCGATGACGCCAAAAAAGTTGCAGACTACCTATGGAACAACTATTTAGGCGGACATTCCCCGTCCTCGCCTCGTCCCCTCGGCAATGTCGTGCTCGACGGTGTCGACTTCGACATCGAAGGCGGGACAAACAAGCATTGGGACGAGCTCGCAAGGGCTCTTTTGGACTTCGGCAACCGAAACGGCAAGAAGGTATTCATCACGGCTGCTCCACAGTGCCCTTTCCCCGACGCCTGGCTCGGCGACGCGCTAACAACAGGTCTTTTCGACTTCGTTTGGGTTCAATTCTACAACAACCCACCATGTCAATTTTCAGGAGATGGCACCAATCTTTTTGACGCTTGGAAGGTATGGACTTCCAAAATTCCTCATGCACAAATCTTCTTGGGCCTCCCGGCGGCTCCGGCGGCTGCCGGCTCTGGGTTCATTCCGGCTGATACTCTCAAATCGGTGGTGCTACCAGTCGTCAAACACTCACCTAAGTACGGCGGCGTTATGCTGTGGTCGAAGTTTTATGATGATCAAACTGGCTATAGCTCTTCCATTAAACACGCTGTTTGA

Coding sequence (CDS)

ATGGAGTTCCGACGCCGAGCTCTCCTCCTCTGCATCATGGTTTTGACGTTAATGGCGAAATCCAATGCTGGGAAGATAGCTATTTATTGGGGTCAAAATGGAAATGAAGGCACTTTGGCTGACACCTGCGCCACCGGAAACTACCAGATTGTTATCCTTGCTTTTCTCTCCGTCTTCGGCAACGGCCAGACGCCGCAGATCAACCTCGCCGGCCACTGCGACCCCTTTAGTAATGGATGCACTAAATTGAGCTCCGACGTCAAGTCGTGCCAAGCTAGAGGCATCAAGGTTATCCTTTCGATCGGAGGCGGCGTGGGGAGCTACTTCCTCTCATCCACCGATGACGCCAAAAAAGTTGCAGACTACCTATGGAACAACTATTTAGGCGGACATTCCCCGTCCTCGCCTCGTCCCCTCGGCAATGTCGTGCTCGACGGTGTCGACTTCGACATCGAAGGCGGGACAAACAAGCATTGGGACGAGCTCGCAAGGGCTCTTTTGGACTTCGGCAACCGAAACGGCAAGAAGGTATTCATCACGGCTGCTCCACAGTGCCCTTTCCCCGACGCCTGGCTCGGCGACGCGCTAACAACAGGTCTTTTCGACTTCGTTTGGGTTCAATTCTACAACAACCCACCATGTCAATTTTCAGGAGATGGCACCAATCTTTTTGACGCTTGGAAGGTATGGACTTCCAAAATTCCTCATGCACAAATCTTCTTGGGCCTCCCGGCGGCTCCGGCGGCTGCCGGCTCTGGGTTCATTCCGGCTGATACTCTCAAATCGGTGGTGCTACCAGTCGTCAAACACTCACCTAAGTACGGCGGCGTTATGCTGTGGTCGAAGTTTTATGATGATCAAACTGGCTATAGCTCTTCCATTAAACACGCTGTTTGA

Protein sequence

MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFGNGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVADYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFITAAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIFLGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV

Homology

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BLAST of CmoCh06G010740 vs. ExPASy Swiss-Prot
Match: P51614 (Acidic endochitinase OS=Vitis vinifera OX=29760 GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 3.0e-114
Identity = 194/294 (65.99%), Postives = 234/294 (79.59%), Query Frame = 0


Query: 8   LLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFGNGQTPQI 67
           LL+ + VL L+  S AG IAIYWGQNGNEGTL  TC TG Y  V +AFL+ FGNGQTP+I
Sbjct: 10  LLISLSVLALLQTSYAGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEI 69

Query: 68  NLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVADYLWNNY 127
           NLAGHC+P SNGCT +S+ +++CQ RGIKV+LSIGGG GSY LSS++DA+ VA+YLWNN+
Sbjct: 70  NLAGHCNPASNGCTSVSTGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDAQNVANYLWNNF 129

Query: 128 LGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARAL--LDFGNRNGKKVFITAAPQC 187
           LGG   SS RPLG+ VLDG+DFDIE G+  HWD+LARAL  ++F    G+KV++TAAPQC
Sbjct: 130 LGGQ--SSSRPLGDAVLDGIDFDIELGSTLHWDDLARALSRIEFQQERGRKVYLTAAPQC 189

Query: 188 PFPDAWLGDALTTGLFDFVWVQFYNNPPCQF-SGDGTNLFDAWKVWTSKIPHAQIFLGLP 247
           PFPD   G AL TGLFD+VWVQFYNNPPCQ+ SG+  NL ++W  WTS I     F+GLP
Sbjct: 190 PFPDKVPGTALNTGLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINSTGSFMGLP 249

Query: 248 AAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
           A+ AAAG GFIPA+ L S +LPV+K SPKYGGVMLWSK+YDDQ+GYSSSIK +V
Sbjct: 250 ASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 301

[Close]

BLAST of CmoCh06G010740 vs. ExPASy Swiss-Prot
Match: P29060 (Acidic endochitinase OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 7.0e-111
Identity = 194/291 (66.67%), Postives = 229/291 (78.69%), Query Frame = 0


Query: 7   ALLLCIMVLTLMA-KSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFGNGQTP 66
           + LL  +VL L A K  AG I IYWGQNGNEG+LADTCAT NY IV +AFL VFGNGQ P
Sbjct: 5   SFLLTALVLFLRALKLEAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNP 64

Query: 67  QINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVADYLWN 126
            +NLAGHCDP +  CT LS+D+++CQ +GIKV+LS+GGG GSYFLSS DDA+ VA+YLWN
Sbjct: 65  VLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWN 124

Query: 127 NYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFITAAPQC 186
           NYLGG   S+ RPLG+ VLDG+DFDIEGGT +HWDELA+ L  F  +  +KV++TAAPQC
Sbjct: 125 NYLGGQ--SNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQQ--RKVYLTAAPQC 184

Query: 187 PFPDAWLGDALTTGLFDFVWVQFYNNPPCQFS-GDGTNLFDAWKVWTSKIPHAQIFLGLP 246
           PFPD WL  AL+TGLFD+VWVQFYNNPPCQ+S G   NL + W  W + I   +IFLGLP
Sbjct: 185 PFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQWNA-IQAGKIFLGLP 244

Query: 247 AAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIK 296
           AA  AAGSGFIP+D L S VLP++  SPKYGGVMLWSKFYD+  GYSS+IK
Sbjct: 245 AAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYDN--GYSSAIK 288

[Close]

BLAST of CmoCh06G010740 vs. ExPASy Swiss-Prot
Match: P23472 (Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2)

HSP 1 Score: 401.4 bits (1030), Expect = 9.1e-111
Identity = 189/302 (62.58%), Postives = 237/302 (78.48%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAKS---NAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLS 60
           M  R +A+LL ++ ++L+  S   + G IAIYWGQNGNEGTL  TC+T  Y  V +AFL+
Sbjct: 1   MAKRTQAILLLLLAISLIMSSSHVDGGGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLN 60

Query: 61  VFGNGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAK 120
            FGNGQTPQINLAGHC+P + GCT +S+ ++SCQ +GIKV+LS+GGG+GSY L+S  DAK
Sbjct: 61  KFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAK 120

Query: 121 KVADYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKV 180
            VADYLWNN+LGG   SS RPLG+ VLDG+DFDIE G+  +WD+LAR L  + ++ GKKV
Sbjct: 121 NVADYLWNNFLGG--KSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAY-SKQGKKV 180

Query: 181 FITAAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQF-SGDGTNLFDAWKVWTSKIPH 240
           ++TAAPQCPFPD +LG AL TGLFD+VWVQFYNNPPCQ+ SG+  N+ ++W  WT+ I  
Sbjct: 181 YLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSINA 240

Query: 241 AQIFLGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKH 299
            +IFLGLPAAP AAGSG++P D L S +LP +K SPKYGGVMLWSKFYDD+ GYSSSI  
Sbjct: 241 GKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILD 299

[Close]

BLAST of CmoCh06G010740 vs. ExPASy Swiss-Prot
Match: P19172 (Acidic endochitinase OS=Arabidopsis thaliana OX=3702 GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 383.3 bits (983), Expect = 2.6e-105
Identity = 178/302 (58.94%), Postives = 225/302 (74.50%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAK---SNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLS 60
           M  R+  +     +   ++K   ++ G IAIYWGQNGNEG L+ TCATG Y  V +AFL 
Sbjct: 4   MTLRKHVIYFLFFISCSLSKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLV 63

Query: 61  VFGNGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAK 120
            FGNGQTP++NLAGHC+P +N CT   S VK CQ+RGIKV+LS+GGG+G+Y + S +DAK
Sbjct: 64  KFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAK 123

Query: 121 KVADYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKV 180
            +ADYLWNN+LGG   SS RPLG+ VLDG+DF+IE G+ +HWD+LAR L  F +R G+K+
Sbjct: 124 VIADYLWNNFLGG--KSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHR-GRKI 183

Query: 181 FITAAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQF-SGDGTNLFDAWKVWTSKIPH 240
           ++T APQCPFPD  +G AL T  FD+VW+QFYNNPPC + SG+  NLFD+W  WT+ I  
Sbjct: 184 YLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAA 243

Query: 241 AQIFLGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKH 299
            + FLGLPAAP AAGSG+IP D L S +LP +K S KYGGVMLWSKF+DD+ GYSSSI  
Sbjct: 244 QKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILA 302

[Close]

BLAST of CmoCh06G010740 vs. ExPASy Swiss-Prot
Match: P36910 (Acidic endochitinase SE2 OS=Beta vulgaris OX=161934 GN=SE2 PE=1 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.7e-104
Identity = 183/291 (62.89%), Postives = 219/291 (75.26%), Query Frame = 0


Query: 9   LLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFGNGQTPQIN 68
           L+ +++      S+  +I IYWGQNG+EG+LADTC +GNY  VILAF++ FGNGQTP +N
Sbjct: 11  LISLLIFASFESSHGSQIVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALN 70

Query: 69  LAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVADYLWNNYL 128
           LAGHCDP +N C  LSSD+K+CQ  GIKV+LSIGGG G Y LSSTDDA   ADYLWN YL
Sbjct: 71  LAGHCDPATN-CNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTYL 130

Query: 129 GGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKK-VFITAAPQCPF 188
           GG   SS RPLG+ VLDG+DFDIE G  + WD+LARAL   G+ NG+K V+++AAPQCP 
Sbjct: 131 GGQ--SSTRPLGDAVLDGIDFDIESGDGRFWDDLARALA--GHNNGQKTVYLSAAPQCPL 190

Query: 189 PDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIFLGLPAAP 248
           PDA L  A+ TGLFD+VWVQFYNNPPCQ+     NL  +W  WT+ +   QIFLGLPA+ 
Sbjct: 191 PDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTT-VQANQIFLGLPAST 250

Query: 249 AAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
            AAGSGFIPAD L S VLP +K S KYGGVMLWSK YD  +GYSS+IK +V
Sbjct: 251 DAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSSAIKSSV 293

[Close]

BLAST of CmoCh06G010740 vs. ExPASy TrEMBL
Match: A0A6J1F173 (acidic endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111441190 PE=3 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.5e-177
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60
           MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG
Sbjct: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60

Query: 61  NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA 120
           NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA
Sbjct: 61  NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA 120

Query: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT 180
           DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT
Sbjct: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT 180

Query: 181 AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240
           AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF
Sbjct: 181 AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240

Query: 241 LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
           LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV
Sbjct: 241 LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 298

[Close]

BLAST of CmoCh06G010740 vs. ExPASy TrEMBL
Match: A0A6J1IBX8 (acidic endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111473326 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 3.7e-171
Identity = 288/298 (96.64%), Postives = 292/298 (97.99%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60
           MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG
Sbjct: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60

Query: 61  NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA 120
           NGQTPQIN+AGHCDPFSNGC KLSSDVKSCQARGIKVILSIGGGVGSYFLSS +DAKKVA
Sbjct: 61  NGQTPQINVAGHCDPFSNGCIKLSSDVKSCQARGIKVILSIGGGVGSYFLSSPEDAKKVA 120

Query: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT 180
           DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNR+GKKVFIT
Sbjct: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRSGKKVFIT 180

Query: 181 AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240
           AAPQCPFPDAWLGDAL TGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF
Sbjct: 181 AAPQCPFPDAWLGDALMTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240

Query: 241 LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
           LGLPAAPAAAGSGFIPAD LKSVVLPVVK SP+YGGVMLWSKFYDDQTGYSSSIK AV
Sbjct: 241 LGLPAAPAAAGSGFIPADALKSVVLPVVKRSPEYGGVMLWSKFYDDQTGYSSSIKQAV 298

[Close]

BLAST of CmoCh06G010740 vs. ExPASy TrEMBL
Match: A0A6J1IFI4 (acidic endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111473987 PE=3 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.0e-168
Identity = 284/298 (95.30%), Postives = 288/298 (96.64%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60
           MEFRRR LLLCIMVLTLMAKSNAG IAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG
Sbjct: 1   MEFRRRDLLLCIMVLTLMAKSNAGMIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60

Query: 61  NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA 120
           NGQTPQINLAGHCDPFSNGC KLSSDVKSCQARGIKVILSIGGGVGSYFL S +DAKKVA
Sbjct: 61  NGQTPQINLAGHCDPFSNGCIKLSSDVKSCQARGIKVILSIGGGVGSYFLPSPEDAKKVA 120

Query: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT 180
           DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNR+GKK+FIT
Sbjct: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRSGKKMFIT 180

Query: 181 AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240
           AAPQCPFPDAWLGDAL TGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF
Sbjct: 181 AAPQCPFPDAWLGDALMTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240

Query: 241 LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
           LGLPAAPAAAGSGFIPAD LKSVVLPVVK SP+YGGVMLWSKFYDDQTGYSSSIK  V
Sbjct: 241 LGLPAAPAAAGSGFIPADALKSVVLPVVKRSPEYGGVMLWSKFYDDQTGYSSSIKQVV 298

[Close]

BLAST of CmoCh06G010740 vs. ExPASy TrEMBL
Match: A0A0A0L8Q8 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G120500 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.7e-150
Identity = 252/298 (84.56%), Postives = 274/298 (91.95%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60
           MEFRRRALL  +++LTLMAKSN GKIAIYWGQNGNE TLA TCA+GN+QIVILAFL+VFG
Sbjct: 1   MEFRRRALLFFMVILTLMAKSNGGKIAIYWGQNGNEDTLAGTCASGNFQIVILAFLAVFG 60

Query: 61  NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA 120
           NGQTPQ+NLAGHCDPFSNGC +LSS++KSCQA+GIKVILSIGGG GSYFLSS DDA+KVA
Sbjct: 61  NGQTPQLNLAGHCDPFSNGCIRLSSEIKSCQAKGIKVILSIGGGAGSYFLSSDDDARKVA 120

Query: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT 180
            YLWNNYLGGHS S  RPLGN VLDGVDFDIEGGTN+HWD LAR+LL FG +NG+KVFIT
Sbjct: 121 LYLWNNYLGGHSAS--RPLGNAVLDGVDFDIEGGTNQHWDVLARSLLKFGAQNGRKVFIT 180

Query: 181 AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240
           AAPQCPFPDAW+G+ALTTGLFDFVWVQFYNN PCQFSGDG+NLFDAWK WTS IPHAQIF
Sbjct: 181 AAPQCPFPDAWIGNALTTGLFDFVWVQFYNNAPCQFSGDGSNLFDAWKQWTSTIPHAQIF 240

Query: 241 LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
           LGLPAAPAAAGSGFIPA  LKS VLP++KHS KYGGVMLWSKFYD+QTGYSSSIKH V
Sbjct: 241 LGLPAAPAAAGSGFIPASVLKSKVLPIIKHSAKYGGVMLWSKFYDEQTGYSSSIKHNV 296

[Close]

BLAST of CmoCh06G010740 vs. ExPASy TrEMBL
Match: A0A5A7TZ90 (Acidic endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005060 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.1e-148
Identity = 251/298 (84.23%), Postives = 274/298 (91.95%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAKSNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLSVFG 60
           MEFR RALL  +++LTLMAKSN GKIAIYWGQNGNEGTLADTCATGNYQIVILAFL+VFG
Sbjct: 1   MEFRLRALLCFMVILTLMAKSNGGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLAVFG 60

Query: 61  NGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAKKVA 120
           NGQTPQINLAGHCDPFSNGC  +SSD+KSCQA+GIKVILSIGGGVGSYFLSS DDA+KVA
Sbjct: 61  NGQTPQINLAGHCDPFSNGCIHVSSDIKSCQAKGIKVILSIGGGVGSYFLSSDDDARKVA 120

Query: 121 DYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKVFIT 180
            YLWNNYLGG+S S  RPLGN VLDGVDFDIEGGTN+HWD LAR+LL FG ++G+KVFIT
Sbjct: 121 LYLWNNYLGGNSGS--RPLGNAVLDGVDFDIEGGTNQHWDVLARSLLKFGAQSGRKVFIT 180

Query: 181 AAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQFSGDGTNLFDAWKVWTSKIPHAQIF 240
           AAPQCPFPDAW+G+AL TGLFD+VWVQFYNN PCQFSGDG+NLFDAW+ WTS IPHA+IF
Sbjct: 181 AAPQCPFPDAWIGNALMTGLFDYVWVQFYNNAPCQFSGDGSNLFDAWQQWTSTIPHAKIF 240

Query: 241 LGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKHAV 299
           LGLPA+P+AAGSGFIPAD LKS VLP +KHS KYGGVMLWSKFYDDQTGYSSSIKH V
Sbjct: 241 LGLPASPSAAGSGFIPADVLKSQVLPNIKHSSKYGGVMLWSKFYDDQTGYSSSIKHNV 296

[Close]

BLAST of CmoCh06G010740 vs. TAIR 10
Match: AT5G24090.1 (chitinase A )

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-106
Identity = 178/302 (58.94%), Postives = 225/302 (74.50%), Query Frame = 0


Query: 1   MEFRRRALLLCIMVLTLMAK---SNAGKIAIYWGQNGNEGTLADTCATGNYQIVILAFLS 60
           M  R+  +     +   ++K   ++ G IAIYWGQNGNEG L+ TCATG Y  V +AFL 
Sbjct: 4   MTLRKHVIYFLFFISCSLSKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLV 63

Query: 61  VFGNGQTPQINLAGHCDPFSNGCTKLSSDVKSCQARGIKVILSIGGGVGSYFLSSTDDAK 120
            FGNGQTP++NLAGHC+P +N CT   S VK CQ+RGIKV+LS+GGG+G+Y + S +DAK
Sbjct: 64  KFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAK 123

Query: 121 KVADYLWNNYLGGHSPSSPRPLGNVVLDGVDFDIEGGTNKHWDELARALLDFGNRNGKKV 180
            +ADYLWNN+LGG   SS RPLG+ VLDG+DF+IE G+ +HWD+LAR L  F +R G+K+
Sbjct: 124 VIADYLWNNFLGG--KSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHR-GRKI 183

Query: 181 FITAAPQCPFPDAWLGDALTTGLFDFVWVQFYNNPPCQF-SGDGTNLFDAWKVWTSKIPH 240
           ++T APQCPFPD  +G AL T  FD+VW+QFYNNPPC + SG+  NLFD+W  WT+ I  
Sbjct: 184 YLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAA 243

Query: 241 AQIFLGLPAAPAAAGSGFIPADTLKSVVLPVVKHSPKYGGVMLWSKFYDDQTGYSSSIKH 299
            + FLGLPAAP AAGSG+IP D L S +LP +K S KYGGVMLWSKF+DD+ GYSSSI  
Sbjct: 244 QKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILA 302

The following BLAST results are available for this feature:

BLAST of CmoCh06G010740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51614	3.0e-114	65.99	Acidic endochitinase OS=Vitis vinifera OX=29760 GN=CHIT3 PE=2 SV=1	[more]
P29060	7.0e-111	66.67	Acidic endochitinase OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P23472	9.1e-111	62.58	Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2	[more]
P19172	2.6e-105	58.94	Acidic endochitinase OS=Arabidopsis thaliana OX=3702 GN=CHIB1 PE=2 SV=2	[more]
P36910	3.7e-104	62.89	Acidic endochitinase SE2 OS=Beta vulgaris OX=161934 GN=SE2 PE=1 SV=1	[more]

BLAST of CmoCh06G010740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F173	1.5e-177	100.00	acidic endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111441190 PE=3 SV=...	[more]
A0A6J1IBX8	3.7e-171	96.64	acidic endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111473326 PE=3 SV=1	[more]
A0A6J1IFI4	1.0e-168	95.30	acidic endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111473987 PE=3 SV=1	[more]
A0A0A0L8Q8	2.7e-150	84.56	Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G120...	[more]
A0A5A7TZ90	1.1e-148	84.23	Acidic endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CmoCh06G010740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24090.1	1.8e-106	58.94	chitinase A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 26..285 e-value: 9.1E-28 score: 97.9
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 24..298 score: 47.150711
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 24..298 e-value: 1.9E-104 score: 350.8
None	No IPR available	PANTHER	PTHR45708	ENDOCHITINASE	coord: 7..298
None	No IPR available	PANTHER	PTHR45708:SF48	CHITINASE	coord: 7..298
None	No IPR available	CDD	cd02877	GH18_hevamine_XipI_class_III	coord: 24..295 e-value: 5.61863E-137 score: 386.595
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 144..152
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 21..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010740.1	CmoCh06G010740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds