CmoCh06G010520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G010520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Location	Cmo_Chr06: 8179226 .. 8186634 (-)
RNA-Seq Expression	CmoCh06G010520
Synteny	CmoCh06G010520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGTAGTTCTGCTTCAGATTAGCTATTCATGTAAGTTACTAGTCAGTTTATCTGTCGTGGTTGAATTGTGTAAATTACATGAGTGTTGCTTGTATGCCTTAGGCTTCCGCCGTATGTATGCATGCGTTATTTTATGTGTAGAATTGAGTATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTAGTGCTCTGGGTGCTTGATGGAGGTCATCGCCCCGCTGAGCCGGTATGCCTAGTTTGCATGAATTACATACTATGATGTAGAAGAAGATTACATGCACCCTCTGTTAATTATTTCCTTGATAAGATTAGGGAATCTTGGATAGGGGCGAAATGCCGCTCCAGCCTGACTTAATCTTTCCCTAGGAACTTAGTGGTTTACCACGGTAAGAAGGTACCCCGGAGCGTTCATAGATTGCTAGCGTGTGAACGGTATCTATAGCTTCGTGGGAGGACCAAGGGGTCCCTGATCAGTCCTTACTGCTCTTAGCCATTTCGCATGGGAAATGTGTCCCCACGTCGTACAGCCCATTAGCTGCATGGGAACGGGTTGGGTCGCGCCCCCCATAGAGGGACTAGATGGGCGTAGGGGTACTCAGCACACCCCTAGGCTAGGTACCATGTAGTCCCAGATAGCCATGTGGAGGTAGCACCTCATAGAGAGATACCGACCATATTAGCTTGGCATATAGAACCTCTGGGCGTTTAATGAGAGAACGAAAAATCAGTGAAACCCAAGGGGCAAGCCCCAAGGGACCTAGATTGGAGCCAGTCGCCCTAGAACCGAAATAGGAAACCGTGGCAACCTATTGAATTAAGATGCGAAAAGAGCCTACAAGTAGGTGGCTTACTGAGTATAATTTTTATACTCATCCTTGCTATGTTTTCCTTTTTTTTTTCAGGAGCGCGAGGCGTCGGTCAAGAGTGGGCGTGATCTGAAGGGAATTGTCACAGAGGGATGGGTTGTCCCGGGGCGTCAGTCCAGTCTTAGTCTTTATTTTTGTATTCGCATTCCTTTTAAATTTATTTTCCAAACGGTCTTGTGATCTGTGTTATCGTTCGAAAAACTTTATTGAAATTTGATGATTTTTGCTACTTCATATTTAAATCTCTTGTGCGTCTGTGTCGTGTCGTTGGTCACTGTCCGTAGTAAAATATTGGGCTGTGACAAATTTGGTATCAGAGCAGTCAGGTTATAGGTCCTGTAGACATTTAGGGTAGAGAGTCGTGTCCTCTGTGACTTCGCTCGTCAATCACATGCCGCTCACGACCAGACGTTCTCACGCGACGGAAACATGGAGACAAAGGTTAAGTTAGTATTTATAAAGCATACCATGACTGACTAGGGCATTATATCGCACATTACCTAAGAGATGTGTTGTGAATGAATTGTGACCATAGTTCTGTGTTATCCTGGTAGATAATGGCACCAAAGAGACGCGAACCGTACGTAGGGCCAGGACCTAGAAGGGGAAGAAGAGAGGAAGTTCAGGACACCTCGGTTGCAACACCTGAAGAGGAACAACCTGAACTTCAGGAGGAGGTTGGGGATATGCCCCAAACTAGCGAGGGGACAGTACCACAGCCATCAAGATCGAAAAGACGCCGAATGAAGGCCAAGGCCCGAAGGCGGCTTGAGACACCCCCTACTACTCCCTTCTCCGAGGAGGCCCCATCGGATCCAACCCCGTGTACAGCAGTCCCACTAAACCAGCCATTAGCCATGCCCTCAGCGGAGATGTTTCAGACGTTCATGATGACGTCGATGGAAAATCAGGCTCTGACGAACCAGATGATTCAGACCATGATGTCTAATCAGTCGACAGGGCAAGGGGGCAAGGATTCAGGGACTATGACTGTGGAGTCCCGCTACTTGAGAGATTTCCAAAGGCATAAACCGCCTTCCTTTGACGGAGGCAAGATGGATCCTATCGCCGCTGAGAATTGGCTAGAGGCCATAGAAACGGTCTTCCATTTTATGAACTGCCCACCAAAGTATGAAGTCCATTGTGGGACATATATGCTGAAAGGAGAAGCGCACTTCTGGTGGAAAGGTGCTCAGAAAACCATAGTACCACAAGGAGAGTTTATTACATGGTGTCAGTTTAAAGACGCATACCTCCACAAATACTACCCAATCACTGCCAGAGTGAAAATGCAGGCCGAGTTCCTCACATTGAAACAGGGAGACAGATCAGTGGGGGATTATGACTTGGAGTTCAATAGGCTGGCAAGGTTTTCTCCAGCCTATGTTAGTTCTGAGGAGTTGAAGGGCGAACGATTTATCGCTGGCCTGAGGGAAGAACTAAGGGGGAATGTGGCATCCCAGTCATCCTTTGTCTATACGAAAGCCCTTCAGGTGGCGACCCTGCTCGACTCGCCCCGTACCGACAAGCTTCAGTTGGGAATAGCACAATCATCCCACACTGCGGCTCAGGGAAAGGGGGCATACCCTAGCCACCCCAGAACTGGCAGACCACCCCGTGGCCGCACTGATAGGCGAGGGAGAGCCCCGGTACGGAACATGACTTTGTGCCCTTATTGTCGGCGCCCTCACACGGGGGAATGCAGAGCAGGGACAGGCGCCTGCTACAGATGCGGTCAGGTAGGGCACTTTGCAGCGAATTGCCCTCAGAGAAACGATCAGCGTGTCAACCTGCCTGCAGTACAGCATCAGAGGGGCCAAGCCGGCCAACATCAGCAGGGGCGAGCTGTAGCCCATGCAACAACAGCCAGGCAAGTTGACCAGCCTGACGCGGTTGTCACAGGTACGCTACCCGTATTTGGTCATCTTGCATTAGTGTTGTTTGATTCGGGTTCGACGCATTCATTTGTATCTGAAGAGTTTGTAGAGCTAGCACAGCTAGAGAAAGAACTTTTAGAGAGTACCCTATCAGTGTCTACCCCTGCTCACAAGCTGTTGCTAGCTACCCATAGGGTTAAGGGAGGTGGAGTAACAATAGCAGGGCGTGTCATCGAAGCTACACTGATAGTGTTAAGTATGCAAGACTTCGATGTCATCCTGGGTATGGATTGGCTAGGCGAGAATCGCGTCTTGATAGACTGCGAGACCCGAATAGTGACTCTCAGGCTCCCGTCAGGGGACAGCTTTACCTACAAGGGAGCCACTTCCAAAGGGGTTCCGAGCGTCATAACCTCGCTAAGGGCTAAGAAGTTGATTCGTGGTGGCGCAATTGCATTCCTAGCCAGCGTGACCTTACATAATAGTAACAAACAAAAACCCTCATCGGTACACATCGTCAGGGAGTTCGTAGATGTCTTTCCGGAGGATCTGCCGGGTTTGCCCCCAGCTAGGGAAGTCGATTTTGGGATTGATTTAGAACCAGGAACGGTGCCGATCTCCAAGGCACCTTACAGGATGGCACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGAATTGTTGGATAAGGGTTTCATCCGACCCAGTGTATCACCCTGGGGAGCCCCTGTTCTGTTTGTCAAGAAGAAGGACGGGTCCATGCGGATGTGTATTGATTACAGAGAATTAAACAAGGTCACTATAAAGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTTCTCCAAAATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTCAGAGAAGGGGATATACCCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTTGTTATGTCTTTTGGCCTTACCAATGCACCAGCTGTTTTCATGGAGCTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCATAGTGTTCATCGACGACATTCTGGTATACTCTAAGTCAGAGGCAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCTAAGTGTGAGTTTTGGTTGTCTGAAGTTGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTTTTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAGGAAGGGCAAGCCCTTTGCTTGGACTCCAGTCTGCGAACAGAGTTTCCAGGAACTCAAGAAGAGGTTGGTGACTGCACCAGTCCTTACAGTTCCAGACGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGGCTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAGTGTTTGCCCTTAAAACGTGGCGGCACTACCTGTATGGGGAAAAAGTACAAGTCTTCACGGATCATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGACAAAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGTGGCTGATGCATTGAGCAGGAAGGCTGTGCACACTTCTGTGATGATCACCACACAGGAAAAACTGCAAGATGAGATGAAGAGGGCTGGGATAGACGTGGTGATTAAGGGTGGTAATGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAAGTTATCGACGCTCAGAGGTCTGATGAACACCTTAGTAAAGTGTGGAGTCAGATTGAGACAGAGAGGCCAGCAGGGTATTCTATCTCCCCAGACGGGGGTCTGCTATGGCAAAACCGCCTGTGCGTTCCCCGAGACGAGGGAATCTTAAAAGATATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGATTTTACTGGTGGTCCGGAATGAAGAGGGACATAGCGGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCAGGATTGCTACAGCCCCTGAGCGTCCCTCAGTGGAAATGGGAAGCAGTCTGTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCATATGGGTGATTGTGGACAGACTGACTAAGACAGCCCACTTTATTCCAGGAAAGTCCACATATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGGGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTGGAGGAGTCTTCAGAAGGCACTAGGAACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGCGAGCCTGCTCCTTAGATTTCGCTGGGTGTTGGGACGAACATCTGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAATTACATGAGTGTTGCTTGTATGCCTTAGGCTTCCGCCGTATGTATGCATGCGTTATTTTATGTGTAGAATTGAGTATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTAGTGCTCTGGGTGCTTGA

mRNA sequence

ATGCTAGTAGTTCTGCTTCAGATTAGCTATTCATAATTGAGTATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTAGTGCTCTGGGTGCTTGATGGAGGTCATCGCCCCGCTGAGCCGATAATGGCACCAAAGAGACGCGAACCGTACGTAGGGCCAGGACCTAGAAGGGGAAGAAGAGAGGAAGTTCAGGACACCTCGGTTGCAACACCTGAAGAGGAACAACCTGAACTTCAGGAGGAGGTTGGGGATATGCCCCAAACTAGCGAGGGGACAGTACCACAGCCATCAAGATCGAAAAGACGCCGAATGAAGGCCAAGGCCCGAAGGCGGCTTGAGACACCCCCTACTACTCCCTTCTCCGAGGAGGCCCCATCGGATCCAACCCCGTGTACAGCAGTCCCACTAAACCAGCCATTAGCCATGCCCTCAGCGGAGATGTTTCAGACGTTCATGATGACGTCGATGGAAAATCAGGCTCTGACGAACCAGATGATTCAGACCATGATGTCTAATCAGTCGACAGGGCAAGGGGGCAAGGATTCAGGGACTATGACTGTGGAGTCCCGCTACTTGAGAGATTTCCAAAGGCATAAACCGCCTTCCTTTGACGGAGGCAAGATGGATCCTATCGCCGCTGAGAATTGGCTAGAGGCCATAGAAACGGTCTTCCATTTTATGAACTGCCCACCAAAGTATGAAGTCCATTGTGGGACATATATGCTGAAAGGAGAAGCGCACTTCTGGTGGAAAGGTGCTCAGAAAACCATAGTACCACAAGGAGAGTTTATTACATGGTGTCAGTTTAAAGACGCATACCTCCACAAATACTACCCAATCACTGCCAGAGTGAAAATGCAGGCCGAGTTCCTCACATTGAAACAGGGAGACAGATCAGTGGGGGATTATGACTTGGAGTTCAATAGGCTGGCAAGGTTTTCTCCAGCCTATGTTAGTTCTGAGGAGTTGAAGGGCGAACGATTTATCGCTGGCCTGAGGGAAGAACTAAGGGGGAATGTGGCATCCCAGTCATCCTTTGTCTATACGAAAGCCCTTCAGGTGGCGACCCTGCTCGACTCGCCCCGTACCGACAAGCTTCAGTTGGGAATAGCACAATCATCCCACACTGCGGCTCAGGGAAAGGGGGCATACCCTAGCCACCCCAGAACTGGCAGACCACCCCGTGGCCGCACTGATAGGCGAGGGAGAGCCCCGGTACGGAACATGACTTTGTGCCCTTATTGTCGGCGCCCTCACACGGGGGAATGCAGAGCAGGGACAGGCGCCTGCTACAGATGCGGTCAGGTAGGGCACTTTGCAGCGAATTGCCCTCAGAGAAACGATCAGCGTGTCAACCTGCCTGCAGTACAGCATCAGAGGGGCCAAGCCGGCCAACATCAGCAGGGGCGAGCTGTAGCCCATGCAACAACAGCCAGGCAAGTTGACCAGCCTGACGCGGTTGTCACAGGTACGCTACCCGTATTTGGTCATCTTGCATTAGTGTTGTTTGATTCGGGTTCGACGCATTCATTTGTATCTGAAGAGTTTGTAGAGCTAGCACAGCTAGAGAAAGAACTTTTAGAGAGTACCCTATCAGTGTCTACCCCTGCTCACAAGCTGTTGCTAGCTACCCATAGGGTTAAGGGAGGTGGAGTAACAATAGCAGGGCGTGTCATCGAAGCTACACTGATAGTGTTAAGTATGCAAGACTTCGATGTCATCCTGGGTATGGATTGGCTAGGCGAGAATCGCGTCTTGATAGACTGCGAGACCCGAATAGTGACTCTCAGGCTCCCGTCAGGGGACAGCTTTACCTACAAGGGAGCCACTTCCAAAGGGGTTCCGAGCGTCATAACCTCGCTAAGGGCTAAGAAGTTGATTCGTGGTGGCGCAATTGCATTCCTAGCCAGCGTGACCTTACATAATAGTAACAAACAAAAACCCTCATCGGTACACATCGTCAGGGAGTTCGTAGATGTCTTTCCGGAGGATCTGCCGGGTTTGCCCCCAGCTAGGGAAGTCGATTTTGGGATTGATTTAGAACCAGGAACGGTGCCGATCTCCAAGGCACCTTACAGGATGGCACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGAATTGTTGGATAAGGGTTTCATCCGACCCAGTGTATCACCCTGGGGAGCCCCTGTTCTGTTTGTCAAGAAGAAGGACGGGTCCATGCGGATGTGTATTGATTACAGAGAATTAAACAAGGTCACTATAAAGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTTCTCCAAAATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTCAGAGAAGGGGATATACCCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTTGTTATGTCTTTTGGCCTTACCAATGCACCAGCTGTTTTCATGGAGCTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCATAGTGTTCATCGACGACATTCTGGTATACTCTAAGTCAGAGGCAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCTAAGTGTGAGTTTTGGTTGTCTGAAGTTGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTTTTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAGGAAGGGCAAGCCCTTTGCTTGGACTCCAGTCTGCGAACAGAGTTTCCAGGAACTCAAGAAGAGGTTGGTGACTGCACCAGTCCTTACAGTTCCAGACGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGGCTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAGTGTTTGCCCTTAAAACGTGGCGGCACTACCTGTATGGGGAAAAAGTACAAGTCTTCACGGATCATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGACAAAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGTGGCTGATGCATTGAGCAGGAAGGCTGTGCACACTTCTGTGATGATCACCACACAGGAAAAACTGCAAGATGAGATGAAGAGGGCTGGGATAGACGTGGTGATTAAGGGTGGTAATGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAAGTTATCGACGCTCAGAGGTCTGATGAACACCTTAGTAAAGTGTGGAGTCAGATTGAGACAGAGAGGCCAGCAGGGTATTCTATCTCCCCAGACGGGGGTCTGCTATGGCAAAACCGCCTGTGCGTTCCCCGAGACGAGGGAATCTTAAAAGATATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGATTTTACTGGTGGTCCGGAATGAAGAGGGACATAGCGGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCAGGATTGCTACAGCCCCTGAGCGTCCCTCAGTGGAAATGGGAAGCAGTCTGTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCATATGGGTGATTGTGGACAGACTGACTAAGACAGCCCACTTTATTCCAGGAAAGTCCACATATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGGGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTGGAGGAGTCTTCAGAAGGCACTAGGAACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGCGAGCCTGCTCCTTAGATTTCGCTGGAATTGAGTATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTAGTGCTCTGGGTGCTTGA

Coding sequence (CDS)

ATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTAGTGCTCTGGGTGCTTGATGGAGGTCATCGCCCCGCTGAGCCGATAATGGCACCAAAGAGACGCGAACCGTACGTAGGGCCAGGACCTAGAAGGGGAAGAAGAGAGGAAGTTCAGGACACCTCGGTTGCAACACCTGAAGAGGAACAACCTGAACTTCAGGAGGAGGTTGGGGATATGCCCCAAACTAGCGAGGGGACAGTACCACAGCCATCAAGATCGAAAAGACGCCGAATGAAGGCCAAGGCCCGAAGGCGGCTTGAGACACCCCCTACTACTCCCTTCTCCGAGGAGGCCCCATCGGATCCAACCCCGTGTACAGCAGTCCCACTAAACCAGCCATTAGCCATGCCCTCAGCGGAGATGTTTCAGACGTTCATGATGACGTCGATGGAAAATCAGGCTCTGACGAACCAGATGATTCAGACCATGATGTCTAATCAGTCGACAGGGCAAGGGGGCAAGGATTCAGGGACTATGACTGTGGAGTCCCGCTACTTGAGAGATTTCCAAAGGCATAAACCGCCTTCCTTTGACGGAGGCAAGATGGATCCTATCGCCGCTGAGAATTGGCTAGAGGCCATAGAAACGGTCTTCCATTTTATGAACTGCCCACCAAAGTATGAAGTCCATTGTGGGACATATATGCTGAAAGGAGAAGCGCACTTCTGGTGGAAAGGTGCTCAGAAAACCATAGTACCACAAGGAGAGTTTATTACATGGTGTCAGTTTAAAGACGCATACCTCCACAAATACTACCCAATCACTGCCAGAGTGAAAATGCAGGCCGAGTTCCTCACATTGAAACAGGGAGACAGATCAGTGGGGGATTATGACTTGGAGTTCAATAGGCTGGCAAGGTTTTCTCCAGCCTATGTTAGTTCTGAGGAGTTGAAGGGCGAACGATTTATCGCTGGCCTGAGGGAAGAACTAAGGGGGAATGTGGCATCCCAGTCATCCTTTGTCTATACGAAAGCCCTTCAGGTGGCGACCCTGCTCGACTCGCCCCGTACCGACAAGCTTCAGTTGGGAATAGCACAATCATCCCACACTGCGGCTCAGGGAAAGGGGGCATACCCTAGCCACCCCAGAACTGGCAGACCACCCCGTGGCCGCACTGATAGGCGAGGGAGAGCCCCGGTACGGAACATGACTTTGTGCCCTTATTGTCGGCGCCCTCACACGGGGGAATGCAGAGCAGGGACAGGCGCCTGCTACAGATGCGGTCAGGTAGGGCACTTTGCAGCGAATTGCCCTCAGAGAAACGATCAGCGTGTCAACCTGCCTGCAGTACAGCATCAGAGGGGCCAAGCCGGCCAACATCAGCAGGGGCGAGCTGTAGCCCATGCAACAACAGCCAGGCAAGTTGACCAGCCTGACGCGGTTGTCACAGGTACGCTACCCGTATTTGGTCATCTTGCATTAGTGTTGTTTGATTCGGGTTCGACGCATTCATTTGTATCTGAAGAGTTTGTAGAGCTAGCACAGCTAGAGAAAGAACTTTTAGAGAGTACCCTATCAGTGTCTACCCCTGCTCACAAGCTGTTGCTAGCTACCCATAGGGTTAAGGGAGGTGGAGTAACAATAGCAGGGCGTGTCATCGAAGCTACACTGATAGTGTTAAGTATGCAAGACTTCGATGTCATCCTGGGTATGGATTGGCTAGGCGAGAATCGCGTCTTGATAGACTGCGAGACCCGAATAGTGACTCTCAGGCTCCCGTCAGGGGACAGCTTTACCTACAAGGGAGCCACTTCCAAAGGGGTTCCGAGCGTCATAACCTCGCTAAGGGCTAAGAAGTTGATTCGTGGTGGCGCAATTGCATTCCTAGCCAGCGTGACCTTACATAATAGTAACAAACAAAAACCCTCATCGGTACACATCGTCAGGGAGTTCGTAGATGTCTTTCCGGAGGATCTGCCGGGTTTGCCCCCAGCTAGGGAAGTCGATTTTGGGATTGATTTAGAACCAGGAACGGTGCCGATCTCCAAGGCACCTTACAGGATGGCACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGAATTGTTGGATAAGGGTTTCATCCGACCCAGTGTATCACCCTGGGGAGCCCCTGTTCTGTTTGTCAAGAAGAAGGACGGGTCCATGCGGATGTGTATTGATTACAGAGAATTAAACAAGGTCACTATAAAGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTTCTCCAAAATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTCAGAGAAGGGGATATACCCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTTGTTATGTCTTTTGGCCTTACCAATGCACCAGCTGTTTTCATGGAGCTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCATAGTGTTCATCGACGACATTCTGGTATACTCTAAGTCAGAGGCAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCTAAGTGTGAGTTTTGGTTGTCTGAAGTTGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTTTTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAGGAAGGGCAAGCCCTTTGCTTGGACTCCAGTCTGCGAACAGAGTTTCCAGGAACTCAAGAAGAGGTTGGTGACTGCACCAGTCCTTACAGTTCCAGACGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGGCTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAGTGTTTGCCCTTAAAACGTGGCGGCACTACCTGTATGGGGAAAAAGTACAAGTCTTCACGGATCATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGACAAAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGTGGCTGATGCATTGAGCAGGAAGGCTGTGCACACTTCTGTGATGATCACCACACAGGAAAAACTGCAAGATGAGATGAAGAGGGCTGGGATAGACGTGGTGATTAAGGGTGGTAATGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAAGTTATCGACGCTCAGAGGTCTGATGAACACCTTAGTAAAGTGTGGAGTCAGATTGAGACAGAGAGGCCAGCAGGGTATTCTATCTCCCCAGACGGGGGTCTGCTATGGCAAAACCGCCTGTGCGTTCCCCGAGACGAGGGAATCTTAAAAGATATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGATTTTACTGGTGGTCCGGAATGAAGAGGGACATAGCGGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCAGGATTGCTACAGCCCCTGAGCGTCCCTCAGTGGAAATGGGAAGCAGTCTGTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCATATGGGTGATTGTGGACAGACTGACTAAGACAGCCCACTTTATTCCAGGAAAGTCCACATATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGGGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTGGAGGAGTCTTCAGAAGGCACTAGGAACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGCGAGCCTGCTCCTTAGATTTCGCTGGAATTGAGTATGCCGGGTTTCGGGTGTTTGATGGACGAATTCGCCCCATTGAGCGCGAACTTAGTGCTCTGGGTGCTTGA

Protein sequence

MPGFGCLMDEFAPLSANLVLWVLDGGHRPAEPIMAPKRREPYVGPGPRRGRREEVQDTSVATPEEEQPELQEEVGDMPQTSEGTVPQPSRSKRRRMKAKARRRLETPPTTPFSEEAPSDPTPCTAVPLNQPLAMPSAEMFQTFMMTSMENQALTNQMIQTMMSNQSTGQGGKDSGTMTVESRYLRDFQRHKPPSFDGGKMDPIAAENWLEAIETVFHFMNCPPKYEVHCGTYMLKGEAHFWWKGAQKTIVPQGEFITWCQFKDAYLHKYYPITARVKMQAEFLTLKQGDRSVGDYDLEFNRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTDKLQLGIAQSSHTAAQGKGAYPSHPRTGRPPRGRTDRRGRAPVRNMTLCPYCRRPHTGECRAGTGACYRCGQVGHFAANCPQRNDQRVNLPAVQHQRGQAGQHQQGRAVAHATTARQVDQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLESTLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDFDVILGMDWLGENRVLIDCETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRGGAIAFLASVTLHNSNKQKPSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAPYRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPAGYSISPDGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGIEYAGFRVFDGRIRPIERELSALGA

Homology

[Close]

BLAST of CmoCh06G010520 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.6e-128
Identity = 257/761 (33.77%), Postives = 425/761 (55.85%), Query Frame = 0


Query: 631  TLHNSNK-----QKPSSVHIVREFVDVFPE-DLPGLP-PAREVDFGIDLEPGTVPISKAP 690
            TL   NK     ++P    I +EF D+  E +   LP P + ++F ++L      +    
Sbjct: 358  TLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN 417

Query: 691  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIK 750
            Y + P +++ + +++ + L  G IR S +    PV+FV KK+G++RM +DY+ LNK    
Sbjct: 418  YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKP 477

Query: 751  NKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFG 810
            N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G
Sbjct: 478  NIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYG 537

Query: 811  LTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 870
            ++ APA F   +N +  E  ++ V+ ++DDIL++SKSE++H  H++ VL  L+   L   
Sbjct: 538  ISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIIN 597

Query: 871  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 930
             +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+ 
Sbjct: 598  QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657

Query: 931  DFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 990
              S+++  L  L +K   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS  
Sbjct: 658  KTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDV 717

Query: 991  GLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKV 1050
             +G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  
Sbjct: 718  AVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777

Query: 1051 QVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTS 1110
            ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      
Sbjct: 778  KILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR------ 837

Query: 1111 VMITTQEKLQDEMKRAGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIE 1170
             ++   E +  + +   I+ V         Q++I    + +V+    +D  L  + +  E
Sbjct: 838  -IVDETEPIPKDSEDNSINFV--------NQISITDDFKNQVVTEYTNDTKLLNLLNN-E 897

Query: 1171 TERPAGYSISPDGGLL-WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFY 1230
             +R        DG L+  ++++ +P D  + + I+ + H+   + HPG   +   + R +
Sbjct: 898  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 957

Query: 1231 WWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQG 1290
             W G+++ I ++V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++  G
Sbjct: 958  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1017

Query: 1291 FNVIWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFW 1350
            +N ++V+VDR +K A  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ W
Sbjct: 1018 YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTW 1077

Query: 1351 RSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLR-ACS 1374
            +         ++FS  + PQTDGQTER NQ +E +LR  CS
Sbjct: 1078 KDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1101

[Close]

BLAST of CmoCh06G010520 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.6e-128
Identity = 257/761 (33.77%), Postives = 425/761 (55.85%), Query Frame = 0


Query: 631  TLHNSNK-----QKPSSVHIVREFVDVFPE-DLPGLP-PAREVDFGIDLEPGTVPISKAP 690
            TL   NK     ++P    I +EF D+  E +   LP P + ++F ++L      +    
Sbjct: 358  TLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN 417

Query: 691  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIK 750
            Y + P +++ + +++ + L  G IR S +    PV+FV KK+G++RM +DY+ LNK    
Sbjct: 418  YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKP 477

Query: 751  NKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFG 810
            N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G
Sbjct: 478  NIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYG 537

Query: 811  LTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 870
            ++ APA F   +N +  E  ++ V+ ++DDIL++SKSE++H  H++ VL  L+   L   
Sbjct: 538  ISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIIN 597

Query: 871  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 930
             +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+ 
Sbjct: 598  QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657

Query: 931  DFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 990
              S+++  L  L +K   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS  
Sbjct: 658  KTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDV 717

Query: 991  GLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKV 1050
             +G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  
Sbjct: 718  AVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777

Query: 1051 QVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTS 1110
            ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      
Sbjct: 778  KILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR------ 837

Query: 1111 VMITTQEKLQDEMKRAGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIE 1170
             ++   E +  + +   I+ V         Q++I    + +V+    +D  L  + +  E
Sbjct: 838  -IVDETEPIPKDSEDNSINFV--------NQISITDDFKNQVVTEYTNDTKLLNLLNN-E 897

Query: 1171 TERPAGYSISPDGGLL-WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFY 1230
             +R        DG L+  ++++ +P D  + + I+ + H+   + HPG   +   + R +
Sbjct: 898  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 957

Query: 1231 WWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQG 1290
             W G+++ I ++V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++  G
Sbjct: 958  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1017

Query: 1291 FNVIWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFW 1350
            +N ++V+VDR +K A  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ W
Sbjct: 1018 YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTW 1077

Query: 1351 RSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLR-ACS 1374
            +         ++FS  + PQTDGQTER NQ +E +LR  CS
Sbjct: 1078 KDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1101

[Close]

BLAST of CmoCh06G010520 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.6e-128
Identity = 257/761 (33.77%), Postives = 425/761 (55.85%), Query Frame = 0


Query: 631  TLHNSNK-----QKPSSVHIVREFVDVFPE-DLPGLP-PAREVDFGIDLEPGTVPISKAP 690
            TL   NK     ++P    I +EF D+  E +   LP P + ++F ++L      +    
Sbjct: 358  TLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN 417

Query: 691  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIK 750
            Y + P +++ + +++ + L  G IR S +    PV+FV KK+G++RM +DY+ LNK    
Sbjct: 418  YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKP 477

Query: 751  NKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFG 810
            N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G
Sbjct: 478  NIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYG 537

Query: 811  LTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 870
            ++ APA F   +N +  E  ++ V+ ++DDIL++SKSE++H  H++ VL  L+   L   
Sbjct: 538  ISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIIN 597

Query: 871  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 930
             +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+ 
Sbjct: 598  QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657

Query: 931  DFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 990
              S+++  L  L +K   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS  
Sbjct: 658  KTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDV 717

Query: 991  GLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKV 1050
             +G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  
Sbjct: 718  AVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777

Query: 1051 QVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTS 1110
            ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      
Sbjct: 778  KILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR------ 837

Query: 1111 VMITTQEKLQDEMKRAGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIE 1170
             ++   E +  + +   I+ V         Q++I    + +V+    +D  L  + +  E
Sbjct: 838  -IVDETEPIPKDSEDNSINFV--------NQISITDDFKNQVVTEYTNDTKLLNLLNN-E 897

Query: 1171 TERPAGYSISPDGGLL-WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFY 1230
             +R        DG L+  ++++ +P D  + + I+ + H+   + HPG   +   + R +
Sbjct: 898  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 957

Query: 1231 WWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQG 1290
             W G+++ I ++V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++  G
Sbjct: 958  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1017

Query: 1291 FNVIWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFW 1350
            +N ++V+VDR +K A  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ W
Sbjct: 1018 YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTW 1077

Query: 1351 RSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLR-ACS 1374
            +         ++FS  + PQTDGQTER NQ +E +LR  CS
Sbjct: 1078 KDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1101

[Close]

BLAST of CmoCh06G010520 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.6e-128
Identity = 257/761 (33.77%), Postives = 425/761 (55.85%), Query Frame = 0


Query: 631  TLHNSNK-----QKPSSVHIVREFVDVFPE-DLPGLP-PAREVDFGIDLEPGTVPISKAP 690
            TL   NK     ++P    I +EF D+  E +   LP P + ++F ++L      +    
Sbjct: 358  TLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN 417

Query: 691  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIK 750
            Y + P +++ + +++ + L  G IR S +    PV+FV KK+G++RM +DY+ LNK    
Sbjct: 418  YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKP 477

Query: 751  NKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFG 810
            N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G
Sbjct: 478  NIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYG 537

Query: 811  LTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 870
            ++ APA F   +N +  E  ++ V+ ++DDIL++SKSE++H  H++ VL  L+   L   
Sbjct: 538  ISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIIN 597

Query: 871  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 930
             +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+ 
Sbjct: 598  QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657

Query: 931  DFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 990
              S+++  L  L +K   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS  
Sbjct: 658  KTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDV 717

Query: 991  GLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKV 1050
             +G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  
Sbjct: 718  AVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777

Query: 1051 QVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTS 1110
            ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      
Sbjct: 778  KILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR------ 837

Query: 1111 VMITTQEKLQDEMKRAGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIE 1170
             ++   E +  + +   I+ V         Q++I    + +V+    +D  L  + +  E
Sbjct: 838  -IVDETEPIPKDSEDNSINFV--------NQISITDDFKNQVVTEYTNDTKLLNLLNN-E 897

Query: 1171 TERPAGYSISPDGGLL-WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFY 1230
             +R        DG L+  ++++ +P D  + + I+ + H+   + HPG   +   + R +
Sbjct: 898  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 957

Query: 1231 WWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQG 1290
             W G+++ I ++V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++  G
Sbjct: 958  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1017

Query: 1291 FNVIWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFW 1350
            +N ++V+VDR +K A  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ W
Sbjct: 1018 YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTW 1077

Query: 1351 RSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLR-ACS 1374
            +         ++FS  + PQTDGQTER NQ +E +LR  CS
Sbjct: 1078 KDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1101

[Close]

BLAST of CmoCh06G010520 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.6e-128
Identity = 257/761 (33.77%), Postives = 425/761 (55.85%), Query Frame = 0


Query: 631  TLHNSNK-----QKPSSVHIVREFVDVFPE-DLPGLP-PAREVDFGIDLEPGTVPISKAP 690
            TL   NK     ++P    I +EF D+  E +   LP P + ++F ++L      +    
Sbjct: 358  TLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN 417

Query: 691  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIK 750
            Y + P +++ + +++ + L  G IR S +    PV+FV KK+G++RM +DY+ LNK    
Sbjct: 418  YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKP 477

Query: 751  NKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFG 810
            N YPLP I+ L  ++QG+T+F+K+DL+S YH +RVR+GD  K AFR   G +E+LVM +G
Sbjct: 478  NIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYG 537

Query: 811  LTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 870
            ++ APA F   +N +  E  ++ V+ ++DDIL++SKSE++H  H++ VL  L+   L   
Sbjct: 538  ISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIIN 597

Query: 871  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 930
             +KCEF  S+V F+G+ +S KG T     I+ V++W QP    E+R FLG   Y R+F+ 
Sbjct: 598  QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657

Query: 931  DFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 990
              S+++  L  L +K   + WTP   Q+ + +K+ LV+ PVL   D S  +++ +DAS  
Sbjct: 658  KTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDV 717

Query: 991  GLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKV 1050
             +G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  
Sbjct: 718  AVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPF 777

Query: 1051 QVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTS 1110
            ++ TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR      
Sbjct: 778  KILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR------ 837

Query: 1111 VMITTQEKLQDEMKRAGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIE 1170
             ++   E +  + +   I+ V         Q++I    + +V+    +D  L  + +  E
Sbjct: 838  -IVDETEPIPKDSEDNSINFV--------NQISITDDFKNQVVTEYTNDTKLLNLLNN-E 897

Query: 1171 TERPAGYSISPDGGLL-WQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFY 1230
             +R        DG L+  ++++ +P D  + + I+ + H+   + HPG   +   + R +
Sbjct: 898  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 957

Query: 1231 WWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQG 1290
             W G+++ I ++V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++  G
Sbjct: 958  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1017

Query: 1291 FNVIWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFW 1350
            +N ++V+VDR +K A  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ W
Sbjct: 1018 YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTW 1077

Query: 1351 RSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLR-ACS 1374
            +         ++FS  + PQTDGQTER NQ +E +LR  CS
Sbjct: 1078 KDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1101

[Close]

BLAST of CmoCh06G010520 vs. ExPASy TrEMBL
Match: A0A6J1EV26 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1)

HSP 1 Score: 1829.3 bits (4737), Expect = 0.0e+00
Identity = 925/1349 (68.57%), Postives = 1073/1349 (79.54%), Query Frame = 0


Query: 34   MAPKRREPYVGPGPRRGRREEVQDTSVATPEEEQPELQEEVGDMPQTSEGTVPQPSRSKR 93
            MAPKR   Y+GPGPRRGRR   +D ++   E EQ    EE  ++    E T P     +R
Sbjct: 1    MAPKRGGDYLGPGPRRGRRRVEEDPNLHFLEMEQHPPLEENPELTSDEEQTPPPAPVPRR 60

Query: 94   RRMKAKARRRLETPPTTPFSEEAPSDPTPCTAVPLNQPLAMPSAEMFQTFMMTSMENQAL 153
             R KA+ R  LET P     EEAP  P P   VP  Q     S + FQ FM  +ME QA 
Sbjct: 61   ARRKAEPRVILETAPQDQEPEEAPPAPAPIPVVPA-QSTTTVSRDEFQAFMRATMETQAQ 120

Query: 154  TNQMIQTMMSNQSTGQGGKDSGTMTVESRYLRDFQRHKPPSFDGGKMDPIAAENWLEAIE 213
              Q++QT+ +NQ+T QG  D GT T+ESRYL+DFQR+KPP+  G                
Sbjct: 121  MAQIMQTLATNQTTVQGTSDPGT-TIESRYLKDFQRYKPPTSTG---------------- 180

Query: 214  TVFHFMNCPPKYEVHCGTYMLKGEAHFWWKGAQKTIVPQGEFITWCQFKDAYLHKYYPIT 273
                                  GEAHFWWKGAQ+ I P+  +I+W QFK+AYL KYYP+ 
Sbjct: 181  ----------------------GEAHFWWKGAQRAITPEEGYISWNQFKEAYLCKYYPVV 240

Query: 274  ARVKMQAEFLTLKQGDRSVGDYDLEFNRLARFSPAYVSSEELKGERFIAGLREELRGNVA 333
            AR K Q  FL LKQGD++V DYDLEFN+LARF P YVS+E++K +RFIAGLR EL+G V 
Sbjct: 241  ARHKCQTAFLELKQGDKTVEDYDLEFNKLARFCPEYVSNEKMKIDRFIAGLRIELQGPVL 300

Query: 334  SQSSFVYTKALQVATLLDSPR-TDKLQLGIAQSSHTAAQGKGAYPSHPRTGRPPRGRTDR 393
             Q++  Y  AL+VAT++D PR   K  + +  + +   Q +    +  R+ R PRGR +R
Sbjct: 301  VQTTSDYAVALRVATVMDMPRQVAKQNVPVVTTQNAFGQRRRPNRNSFRSDRQPRGRFER 360

Query: 394  RGRAPVRNMTLCPYCRRPHTGECRAGTGACYRCGQVGHFAANCPQRNDQRVNLPAVQHQR 453
            RGRAP  N   CP C++ H GEC AGTG C+ CG+ GH  A+CP + +   N P  Q+QR
Sbjct: 361  RGRAPEYNRPECPNCKKYHEGECFAGTGGCFGCGKPGHRIADCPHKRNHEGNRPVGQYQR 420

Query: 454  GQAGQHQQGRAVAHATTARQVDQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELA 513
            G+ G  QQ RAV HA T R+ ++ DAVVTGTLP+  HLA  LFDSG+THSF+SE FV+ A
Sbjct: 421  GR-GATQQARAVVHAITTRKAEETDAVVTGTLPILDHLAFTLFDSGTTHSFISEGFVKSA 480

Query: 514  QLEKELLESTLSVSTPAH---KLLLATHRVKGGGVTIAGRVIEATLIVLSMQDFDVILGM 573
             LE E LE  L+VSTPA+   K L ATHRVKGG V +AGR + A+LIVL MQDFDVILGM
Sbjct: 481  NLELESLEIPLTVSTPANEATKCLTATHRVKGGSVIVAGRKLVASLIVLCMQDFDVILGM 540

Query: 574  DWLGENRVLIDCETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRGGAIAFLAS 633
            DWLGENR LIDCE R VT R   G++F +KG  S+  P VIT+L+A+K++  GA A LAS
Sbjct: 541  DWLGENRALIDCEARKVTFRPLIGENFEFKGDISRSTPRVITALKARKMLNQGAWAILAS 600

Query: 634  VTLHNSNKQKPSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAPYRMAPA 693
            VT  N    K SSV +V EF DVFPE+LPGLPP REVDF IDLEPGT PISK PYRMAPA
Sbjct: 601  VTKVNKTSLKVSSVPVVGEFEDVFPEELPGLPPNREVDFVIDLEPGTTPISKVPYRMAPA 660

Query: 694  ELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIKNKYPLP 753
            EL+ELK QLQELLDKGFIRPSVSPWGAPVLFVKKKDG+MR+CIDYRELNKVTIKNKYPLP
Sbjct: 661  ELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGTMRLCIDYRELNKVTIKNKYPLP 720

Query: 754  RIDDLFDQLQGATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFGLTNAPA 813
            RIDDLFDQLQGATVFSKIDLRSGYHQ+R+RE DIPKTAFRSRYGHYEF+VMSFGLTNAPA
Sbjct: 721  RIDDLFDQLQGATVFSKIDLRSGYHQMRIREEDIPKTAFRSRYGHYEFIVMSFGLTNAPA 780

Query: 814  VFMELMNRVFKEFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEF 873
            VFMELMNRVFKEFLDTFVIVFIDDILVYSKSE +HE HLR+VLT+LR  +LYAKFSKCEF
Sbjct: 781  VFMELMNRVFKEFLDTFVIVFIDDILVYSKSEMEHEGHLRRVLTLLRNHKLYAKFSKCEF 840

Query: 874  WLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKIS 933
            WL EVAFLGHVVSS+G+TVDPAKIEAV++WP+PTTVTEVRSFLGLAGYYRRF++DFSK+S
Sbjct: 841  WLQEVAFLGHVVSSQGVTVDPAKIEAVLKWPRPTTVTEVRSFLGLAGYYRRFIKDFSKMS 900

Query: 934  SALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVL 993
            +ALTQLT+KGKPF WT  CEQSF ELKKRLVTAPVLTVPDGSG LVVYSDASGKGLGCVL
Sbjct: 901  AALTQLTKKGKPFIWTQECEQSFLELKKRLVTAPVLTVPDGSGGLVVYSDASGKGLGCVL 960

Query: 994  MQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLF 1053
            MQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTWRHYLYGE+VQV+TDHKSLKYLF
Sbjct: 961  MQKGKVIAYASRQLKEYERNYPTHDLELAAVVYALKTWRHYLYGERVQVYTDHKSLKYLF 1020

Query: 1054 TQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKR 1113
            TQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRK  HTS +IT Q+ LQDE++R
Sbjct: 1021 TQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKTAHTSALITRQKYLQDEIQR 1080

Query: 1114 AGIDVVIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPAGYSISPDGGL 1173
            AGI+V+ +G   Q+AQL++QPTL++++I+AQR+D HLS++W Q ETERP GYS+S +GGL
Sbjct: 1081 AGIEVLDRGITAQLAQLSVQPTLKRRIIEAQRTDTHLSRIWGQQETERPNGYSVSSEGGL 1140

Query: 1174 LWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRC 1233
            +WQ+RLCVPRDE IL++IMTEAH+TSY FHPGSTKMYQDLK  YWW GMK+D+A++VSRC
Sbjct: 1141 MWQDRLCVPRDEKILQEIMTEAHNTSYTFHPGSTKMYQDLKCSYWWPGMKKDVAEYVSRC 1200

Query: 1234 LTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAH 1293
            LTCQQVKAPRQRPAGLLQPL++PQWKWE + MDFI+GLPKT++GFNVIWVIVDRLTK AH
Sbjct: 1201 LTCQQVKAPRQRPAGLLQPLNIPQWKWEEISMDFIAGLPKTRRGFNVIWVIVDRLTKVAH 1260

Query: 1294 FIPGKSTYRVDRWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTA 1353
            FIPG++TYRVD+WA+LY+KEI+RLHGVPV+IVSDRD +FTS FW+ LQKALGTQL+F+TA
Sbjct: 1261 FIPGRATYRVDQWARLYVKEIIRLHGVPVNIVSDRDAKFTSNFWKGLQKALGTQLKFTTA 1308

Query: 1354 FHPQTDGQTERLNQVLEDMLRACSLDFAG 1379
            FHPQTDGQTERLNQ LEDMLRAC +DFAG
Sbjct: 1321 FHPQTDGQTERLNQTLEDMLRACVIDFAG 1308

[Close]

BLAST of CmoCh06G010520 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 746/1218 (61.25%), Postives = 910/1218 (74.71%), Query Frame = 0


Query: 177  MTVESRYLRDFQRHKPPSFDGGKMDPIAAENWLEAIETVFHFMNCPPKYEVHCGTYMLKG 236
            ++ E+++LRDF+++ P +FDG   +P  A+ WL +IET+F +M CP   +V C  + L+ 
Sbjct: 106  LSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLED 165

Query: 237  EAHFWWKGAQKTIVPQGEFITWCQFKDAYLHKYYPITARVKMQAEFLTLKQGDRSVGDYD 296
                WW+ A++ +      ITW QFK+ +  K++    +     EFL L+QGD +V  YD
Sbjct: 166  RGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYD 225

Query: 297  LEFNRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTD 356
             EF+ L+RF+P  V  E  + E+F+ GLR +L+G V +     +  AL++A  L  P   
Sbjct: 226  AEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERA 285

Query: 357  KLQLGIAQSSHTAAQGK----------------GAYPSHPRTGRPPRGRTDRRGRAPVRN 416
                   + S    + K                G +  H R      GRT       +R 
Sbjct: 286  DASKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRH-RRELAAAGRT-------LRE 345

Query: 417  MTLCPYCRRPHTGECRAGTGACYRCGQVGHFAANCPQRNDQRVNLPAVQHQRGQAGQHQQ 476
            +  C  C R H G C AG+G C+RC Q GH A  CP++          +    Q    QQ
Sbjct: 346  LPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRK--------PFETTPPQPSAAQQ 405

Query: 477  GRAVAHATTARQVDQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLE 536
            GR    ATT ++ ++   VVTGTLP+ GH A VLFDSGS+HSF+S  FV+   LE E L 
Sbjct: 406  GR--VFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 465

Query: 537  STLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDFDVILGMDWLGENRVLID 596
            S LSVSTP+ ++LL+  ++K   V IA R+++ TL+VL MQDFDVILGMDWL  N   ID
Sbjct: 466  SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 525

Query: 597  CETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRGGAIAFLASVTLHNSNKQKP 656
            C  + V    PS  SF ++GA    +P VI++++A KL+  G    LASV      +   
Sbjct: 526  CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 585

Query: 657  SSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAPYRMAPAELRELKEQLQE 716
            SS  +VRE+ DVFP++LPGLPP REVDF I+LEPGT PIS+APYRMAPAEL+ELK QLQE
Sbjct: 586  SSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQE 645

Query: 717  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQG 776
            LLDKGFIRPSVSPWGAPVLFVKKKDGSMR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQG
Sbjct: 646  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQG 705

Query: 777  ATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFK 836
            ATVFSKIDLRSGYHQLR+R+GDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFK
Sbjct: 706  ATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFK 765

Query: 837  EFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHV 896
            EFLD+FVIVFIDDIL+YSK+EA+HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHV
Sbjct: 766  EFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHV 825

Query: 897  VSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTRKGK 956
            VSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLTRKG 
Sbjct: 826  VSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 885

Query: 957  PFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYAS 1016
            PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYAS
Sbjct: 886  PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS 945

Query: 1017 RQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRR 1076
            RQLK +E+NYPTHDLELAAVVFALK WRHYLYGEK+Q++TDHKSLKY FTQKELNMRQRR
Sbjct: 946  RQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRR 1005

Query: 1077 WLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVVIKGGN 1136
            WLELVKDYD EILYHPGKANVVADALSRK  H++ +IT Q  L  + +RA I V +    
Sbjct: 1006 WLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT 1065

Query: 1137 VQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPAGYSISPDGGLLWQNRLCVPRD 1196
             Q+AQLT+QPTLR+K+I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D
Sbjct: 1066 AQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPED 1125

Query: 1197 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1256
              +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVSRCL CQQVKAPRQ
Sbjct: 1126 SAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQ 1185

Query: 1257 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFIPGKSTYRVD 1316
             PAGLLQPLSVP WKWE+V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+PGKSTY   
Sbjct: 1186 HPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS 1245

Query: 1317 RWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1376
            +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FW+ LQ ALGT+L FSTAFHPQTDGQTER
Sbjct: 1246 KWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTER 1305

Query: 1377 LNQVLEDMLRACSLDFAG 1379
            LNQ+LEDMLRAC L+F+G
Sbjct: 1306 LNQILEDMLRACVLEFSG 1305

[Close]

BLAST of CmoCh06G010520 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 746/1218 (61.25%), Postives = 910/1218 (74.71%), Query Frame = 0


Query: 177  MTVESRYLRDFQRHKPPSFDGGKMDPIAAENWLEAIETVFHFMNCPPKYEVHCGTYMLKG 236
            ++ E+++LRDF+++ P +FDG   +P  A+ WL +IET+F +M CP   +V C  + L+ 
Sbjct: 106  LSTEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLED 165

Query: 237  EAHFWWKGAQKTIVPQGEFITWCQFKDAYLHKYYPITARVKMQAEFLTLKQGDRSVGDYD 296
                WW+ A++ +      ITW QFK+ +  K++    +     EFL L+QGD +V  YD
Sbjct: 166  RGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYD 225

Query: 297  LEFNRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTD 356
             EF+ L+RF+P  V  E  + E+F+ GLR +L+G V +     +  AL++A  L  P   
Sbjct: 226  AEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERA 285

Query: 357  KLQLGIAQSSHTAAQGK----------------GAYPSHPRTGRPPRGRTDRRGRAPVRN 416
                   + S    + K                G +  H R      GRT       +R 
Sbjct: 286  DASKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRH-RRELAAAGRT-------LRE 345

Query: 417  MTLCPYCRRPHTGECRAGTGACYRCGQVGHFAANCPQRNDQRVNLPAVQHQRGQAGQHQQ 476
            +  C  C R H G C AG+G C+RC Q GH A  CP++          +    Q    QQ
Sbjct: 346  LPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRK--------PFETTPPQPSAAQQ 405

Query: 477  GRAVAHATTARQVDQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLE 536
            GR    ATT ++ ++   VVTGTLP+ GH A VLFDSGS+HSF+S  FV+   LE E L 
Sbjct: 406  GR--VFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 465

Query: 537  STLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDFDVILGMDWLGENRVLID 596
            S LSVSTP+ ++LL+  ++K   V IA R+++ TL+VL MQDFDVILGMDWL  N   ID
Sbjct: 466  SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 525

Query: 597  CETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRGGAIAFLASVTLHNSNKQKP 656
            C  + V    PS  SF ++GA    +P VI++++A KL+  G    LASV      +   
Sbjct: 526  CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 585

Query: 657  SSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAPYRMAPAELRELKEQLQE 716
            SS  +VRE+ DVFP++LPGLPP REVDF I+LEPGT PIS+APYRMAPAEL+ELK QLQE
Sbjct: 586  SSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQE 645

Query: 717  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQG 776
            LLDKGFIRPSVSPWGAPVLFVKKKDGSMR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQG
Sbjct: 646  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQG 705

Query: 777  ATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFK 836
            ATVFSKIDLRSGYHQLR+R+GDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFK
Sbjct: 706  ATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFK 765

Query: 837  EFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHV 896
            EFLD+FVIVFIDDIL+YSK+EA+HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHV
Sbjct: 766  EFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHV 825

Query: 897  VSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTRKGK 956
            VSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLTRKG 
Sbjct: 826  VSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 885

Query: 957  PFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYAS 1016
            PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYAS
Sbjct: 886  PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS 945

Query: 1017 RQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRR 1076
            RQLK +E+NYPTHDLELAAVVFALK WRHYLYGEK+Q++TDHKSLKY FTQKELNMRQRR
Sbjct: 946  RQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRR 1005

Query: 1077 WLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVVIKGGN 1136
            WLELVKDYD EILYHPGKANVVADALSRK  H++ +IT Q  L  + +RA I V +    
Sbjct: 1006 WLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT 1065

Query: 1137 VQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPAGYSISPDGGLLWQNRLCVPRD 1196
             Q+AQLT+QPTLR+K+I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D
Sbjct: 1066 AQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPED 1125

Query: 1197 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1256
              +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVSRCL CQQVKAPRQ
Sbjct: 1126 SAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQ 1185

Query: 1257 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFIPGKSTYRVD 1316
             PAGLLQPLSVP WKWE+V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+PGKSTY   
Sbjct: 1186 HPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS 1245

Query: 1317 RWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1376
            +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FW+ LQ ALGT+L FSTAFHPQTDGQTER
Sbjct: 1246 KWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTER 1305

Query: 1377 LNQVLEDMLRACSLDFAG 1379
            LNQ+LEDMLRAC L+F+G
Sbjct: 1306 LNQILEDMLRACVLEFSG 1305

[Close]

BLAST of CmoCh06G010520 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 746/1218 (61.25%), Postives = 910/1218 (74.71%), Query Frame = 0


Query: 177  MTVESRYLRDFQRHKPPSFDGGKMDPIAAENWLEAIETVFHFMNCPPKYEVHCGTYMLKG 236
            ++ E+++LRDF+++ P +FDG   +P  A+ WL +IET+F +M CP   +V C  + L+ 
Sbjct: 457  LSTEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLED 516

Query: 237  EAHFWWKGAQKTIVPQGEFITWCQFKDAYLHKYYPITARVKMQAEFLTLKQGDRSVGDYD 296
                WW+ A++ +      ITW QFK+ +  K++    +     EFL L+QGD +V  YD
Sbjct: 517  RGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYD 576

Query: 297  LEFNRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTD 356
             EF+ L+RF+P  V  E  + E+F+ GLR +L+G V +     +  AL++A  L  P   
Sbjct: 577  AEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERA 636

Query: 357  KLQLGIAQSSHTAAQGK----------------GAYPSHPRTGRPPRGRTDRRGRAPVRN 416
                   + S    + K                G +  H R      GRT       +R 
Sbjct: 637  DASKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRH-RRELAAAGRT-------LRE 696

Query: 417  MTLCPYCRRPHTGECRAGTGACYRCGQVGHFAANCPQRNDQRVNLPAVQHQRGQAGQHQQ 476
            +  C  C R H G C AG+G C+RC Q GH A  CP++          +    Q    QQ
Sbjct: 697  LPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRK--------PFETTPPQPSAAQQ 756

Query: 477  GRAVAHATTARQVDQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLE 536
            GR    ATT ++ ++   VVTGTLP+ GH A VLFDSGS+HSF+S  FV+   LE E L 
Sbjct: 757  GR--VFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 816

Query: 537  STLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDFDVILGMDWLGENRVLID 596
            S LSVSTP+ ++LL+  ++K   V IA R+++ TL+VL MQDFDVILGMDWL  N   ID
Sbjct: 817  SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 876

Query: 597  CETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRGGAIAFLASVTLHNSNKQKP 656
            C  + V    PS  SF ++GA    +P VI++++A KL+  G    LASV      +   
Sbjct: 877  CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 936

Query: 657  SSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAPYRMAPAELRELKEQLQE 716
            SS  +VRE+ DVFP++LPGLPP REVDF I+LEPGT PIS+APYRMAPAEL+ELK QLQE
Sbjct: 937  SSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQE 996

Query: 717  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQG 776
            LLDKGFIRPSVSPWGAPVLFVKKKDGSMR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQG
Sbjct: 997  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQG 1056

Query: 777  ATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFK 836
            ATVFSKIDLRSGYHQLR+R+GDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFK
Sbjct: 1057 ATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFK 1116

Query: 837  EFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHV 896
            EFLD+FVIVFIDDIL+YSK+EA+HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHV
Sbjct: 1117 EFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHV 1176

Query: 897  VSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTRKGK 956
            VSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLTRKG 
Sbjct: 1177 VSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 1236

Query: 957  PFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYAS 1016
            PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYAS
Sbjct: 1237 PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS 1296

Query: 1017 RQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRR 1076
            RQLK +E+NYPTHDLELAAVVFALK WRHYLYGEK+Q++TDHKSLKY FTQKELNMRQRR
Sbjct: 1297 RQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRR 1356

Query: 1077 WLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVVIKGGN 1136
            WLELVKDYD EILYHPGKANVVADALSRK  H++ +IT Q  L  + +RA I V +    
Sbjct: 1357 WLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT 1416

Query: 1137 VQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPAGYSISPDGGLLWQNRLCVPRD 1196
             Q+AQLT+QPTLR+K+I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D
Sbjct: 1417 AQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPED 1476

Query: 1197 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1256
              +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVSRCL CQQVKAPRQ
Sbjct: 1477 SAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQ 1536

Query: 1257 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFIPGKSTYRVD 1316
             PAGLLQPLSVP WKWE+V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+PGKSTY   
Sbjct: 1537 HPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS 1596

Query: 1317 RWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1376
            +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FW+ LQ ALGT+L FSTAFHPQTDGQTER
Sbjct: 1597 KWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTER 1656

Query: 1377 LNQVLEDMLRACSLDFAG 1379
            LNQ+LEDMLRAC L+F+G
Sbjct: 1657 LNQILEDMLRACVLEFSG 1656

[Close]

BLAST of CmoCh06G010520 vs. ExPASy TrEMBL
Match: A0A5D3DE92 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00210 PE=4 SV=1)

HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 746/1218 (61.25%), Postives = 910/1218 (74.71%), Query Frame = 0


Query: 177  MTVESRYLRDFQRHKPPSFDGGKMDPIAAENWLEAIETVFHFMNCPPKYEVHCGTYMLKG 236
            ++ E+++LRDF+++ P +FDG   +P  A+ WL +IET+F +M CP   +V C  + L+ 
Sbjct: 413  LSTEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLED 472

Query: 237  EAHFWWKGAQKTIVPQGEFITWCQFKDAYLHKYYPITARVKMQAEFLTLKQGDRSVGDYD 296
                WW+ A++ +      ITW QFK+ +  K++    +     EFL L+QGD +V  YD
Sbjct: 473  RGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYD 532

Query: 297  LEFNRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTD 356
             EF+ L+RF+P  V  E  + E+F+ GLR +L+G V +     +  AL++A  L  P   
Sbjct: 533  AEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERA 592

Query: 357  KLQLGIAQSSHTAAQGK----------------GAYPSHPRTGRPPRGRTDRRGRAPVRN 416
                   + S    + K                G +  H R      GRT       +R 
Sbjct: 593  DASKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRH-RRELAAAGRT-------LRE 652

Query: 417  MTLCPYCRRPHTGECRAGTGACYRCGQVGHFAANCPQRNDQRVNLPAVQHQRGQAGQHQQ 476
            +  C  C R H G C AG+G C+RC Q GH A  CP++          +    Q    QQ
Sbjct: 653  LPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRK--------PFETTPPQPSAAQQ 712

Query: 477  GRAVAHATTARQVDQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLE 536
            GR    ATT ++ ++   VVTGTLP+ GH A VLFDSGS+HSF+S  FV+   LE E L 
Sbjct: 713  GR--VFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLG 772

Query: 537  STLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDFDVILGMDWLGENRVLID 596
            S LSVSTP+ ++LL+  ++K   V IA R+++ TL+VL MQDFDVILGMDWL  N   ID
Sbjct: 773  SVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANID 832

Query: 597  CETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRGGAIAFLASVTLHNSNKQKP 656
            C  + V    PS  SF ++GA    +P VI++++A KL+  G    LASV      +   
Sbjct: 833  CYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSL 892

Query: 657  SSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAPYRMAPAELRELKEQLQE 716
            SS  +VRE+ DVFP++LPGLPP REVDF I+LEPGT PIS+APYRMAPAEL+ELK QLQE
Sbjct: 893  SSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQE 952

Query: 717  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQG 776
            LLDKGFIRPSVSPWGAPVLFVKKKDGSMR+CIDYRELNKVT+KN+YPLPRIDDLFDQLQG
Sbjct: 953  LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQG 1012

Query: 777  ATVFSKIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFK 836
            ATVFSKIDLRSGYHQLR+R+GDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFK
Sbjct: 1013 ATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFK 1072

Query: 837  EFLDTFVIVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHV 896
            EFLD+FVIVFIDDIL+YSK+EA+HE HL +VL  LRA +LYAKFSKCEFWL +V FLGHV
Sbjct: 1073 EFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHV 1132

Query: 897  VSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTRKGK 956
            VSS+G++VDPAKIEAV  W +P+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLTRKG 
Sbjct: 1133 VSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 1192

Query: 957  PFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYAS 1016
            PF W+P CE+SFQELK++LVTAPVLTVPDGSGN V+YSDAS KGLGCVLMQ+GKV+AYAS
Sbjct: 1193 PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS 1252

Query: 1017 RQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDHKSLKYLFTQKELNMRQRR 1076
            RQLK +E+NYPTHDLELAAVVFALK WRHYLYGEK+Q++TDHKSLKY FTQKELNMRQRR
Sbjct: 1253 RQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRR 1312

Query: 1077 WLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVVIKGGN 1136
            WLELVKDYD EILYHPGKANVVADALSRK  H++ +IT Q  L  + +RA I V +    
Sbjct: 1313 WLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT 1372

Query: 1137 VQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPAGYSISPDGGLLWQNRLCVPRD 1196
             Q+AQLT+QPTLR+K+I AQ  D +L++    +ETE+  G+SIS D GL+++ RLCVP D
Sbjct: 1373 AQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPED 1432

Query: 1197 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1256
              +  +++TEAH + +  HPGSTKMYQDL+  YWW GMKRD+ADFVSRCL CQQVKAPRQ
Sbjct: 1433 SAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQ 1492

Query: 1257 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVIWVIVDRLTKTAHFIPGKSTYRVD 1316
             PAGLLQPLSVP WKWE+V MDFI+GLPKT +G+ VIWV+VDRLTK+AHF+PGKSTY   
Sbjct: 1493 HPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS 1552

Query: 1317 RWAQLYIKEIVRLHGVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1376
            +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FW+ LQ ALGT+L FSTAFHPQTDGQTER
Sbjct: 1553 KWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTER 1612

Query: 1377 LNQVLEDMLRACSLDFAG 1379
            LNQ+LEDMLRAC L+F+G
Sbjct: 1613 LNQILEDMLRACVLEFSG 1612

[Close]

BLAST of CmoCh06G010520 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0


Query: 847 HLRKVLTILRAQQLYAKFSKCEFWLSEVAFLG--HVVSSKGITVDPAKIEAVMRWPQPTT 906
           HL  VL I    Q YA   KC F   ++A+LG  H++S +G++ DPAK+EA++ WP+P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 907 VTEVRSFLGLAGYYRRFVQDFSKISSALTQLTRKGKPFAWTPVCEQSFQELKKRLVTAPV 966
            TE+R FLGL GYYRRFV+++ KI   LT+L +K     WT +   +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 967 LTVPD 970
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of CmoCh06G010520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	4.6e-128	33.77	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.6e-128	33.77	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.6e-128	33.77	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	4.6e-128	33.77	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	4.6e-128	33.77	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CmoCh06G010520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV26	0.0e+00	68.57	Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1	[more]
A0A5D3CQB5	0.0e+00	61.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7TEQ2	0.0e+00	61.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5D3DY07	0.0e+00	61.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62...	[more]
A0A5D3DE92	0.0e+00	61.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83...	[more]

BLAST of CmoCh06G010520 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.8e-26	45.60	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 684..704
None	No IPR available	GENE3D	4.10.60.10		coord: 416..473 e-value: 4.1E-8 score: 35.4
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 667..806 e-value: 1.0E-92 score: 311.3
None	No IPR available	GENE3D	1.10.340.70		coord: 1152..1236 e-value: 4.2E-18 score: 67.4
None	No IPR available	PFAM	PF08284	RVP_2	coord: 461..589 e-value: 8.2E-32 score: 109.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..396
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 642..1373
None	No IPR available	CDD	cd01647	RT_LTR	coord: 705..881 e-value: 1.82829E-95 score: 302.207
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 975..1090 e-value: 8.75565E-60 score: 198.871
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 483..572 e-value: 3.02391E-16 score: 73.5248
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 421..437 e-value: 7.9E-6 score: 35.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 421..437 e-value: 1.5E-6 score: 28.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 422..437 score: 10.872446
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 746..881 e-value: 1.0E-92 score: 311.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 891..977 e-value: 4.3E-31 score: 108.8
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 973..1068 e-value: 1.5E-33 score: 115.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1246..1380 e-value: 3.3E-31 score: 110.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 978..1100 e-value: 1.8E-5 score: 26.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 721..880 e-value: 9.1E-28 score: 97.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 702..881 score: 11.499489
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 232..326 e-value: 1.8E-15 score: 57.0
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 1185..1237 e-value: 1.1E-17 score: 63.8
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 483..595 e-value: 7.5E-18 score: 66.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 482..580
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1248..1370 score: 15.501014
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 645..1074
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1249..1376
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 409..442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010520.1	CmoCh06G010520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0019538	protein metabolic process
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0140657	ATP-dependent activity
molecular_function	GO:0016757	glycosyltransferase activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0008270	zinc ion binding