CmoCh06G010340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G010340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CCHC-type domain-containing protein
Location	Cmo_Chr06: 8079916 .. 8083369 (-)
RNA-Seq Expression	CmoCh06G010340
Synteny	CmoCh06G010340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGCCGTCGAAGGCCAAGGCGAACGGAGTTCTCTACAAATTACAGCACTTCCAATCGGAGACGGCCGGTTTCATTTTTCCAGCCGACTGAACTTCACCAAGAAACGGCCGGAGCAGTTTTCCATTTCTCTTTCAACTCCGGTATTTTCTTGTTTTCAAGAAACATGGACAATGAAACCCGACGGAGAATCAAGGAAACGGTGATTGACTTATTGAAGATATCGAACATGGAAGAGATGACGGAGTACAAAATTCGAGCCGAGGCCGAAAAACGGCTCGGAATGGATCTCTCCGATATTCAATGCAAGTGCCTGGTGAGGGACGTGGTCGAGGACTTTTTACATTCATTTACGGAACGTGATGATAAGGGAAAAGAGGGAGAACCAGGGCCTAGTGATCGTTACGAGAATAAAGCGACGGAGCAGGAGATAGTCCGGAAGAAGGAGATTAACGCTGATGTTGACCGTGTGATTTGCCAGGTAAAGCCTTGCCCTTCTTGATTCTTGAGAAAAGTTGTTGTGAATTTGAAACCGGAAAAATTGGGATTTTGCGTATATCTTGTGAACTTAGTGAATTGAACTTCAGTGCAATGGAGCTTGTTGCCCTTCTTAGAATGCTTCCGAAGCTGGTTGTATATGTTCCTATGGCTAAATTGTTATAATTCCTTGCTCGTGATCATTATACTATAGTCTTTTGTTACTGAACTGCACCAAAAGGTTAGATTGTGGATGAAATTCCGGTGTACATTCTCTGGCATTTGTGCATTATGATGTAAATTATTGAATCCTCTATATTTATGATTCTAATAACTAAAGAAATGTACATTTAGACAAGATCTTTACAGCACTGCATCCTTTCAAAATTTTAGTTTTTGTTTTTAGAATTGGACAAAAAAAATTCAAATGTTTATCCAACCTAATTAAAAATTATAGTAAAGAAATTATGTATAAATTTCAAAAACAGAAAGGTAAAGTAATATTGTTATCAAATAGAGACATAGTTGTTAAAATTGTCCATTACAAATTTTACTCTGTATGAAACATGATCCACATATAATAACCAGTCTGCAATATTATGATTTAGTAGCTAATGATTTTCGGGTTTCTTTCAGCTATCTAATAACAGGAATGTGACAGTTCATGAATTTAAAGGGAACGCTCTGGTATCAATTAGGCAGTATTATGAAAAAGATGGAAAACAGCTTCCTGGTATTAAAGGTGGGCACTATGCATTGGTCTCTTCATTTCCTCTTATGGTGAATCTTCTTATTTTGCCCTGACACACCCTAACACATTTGGCTGAGGTGATGTGTTGGAAAATTTCTGGGAACTCGATTCTCTTGTATCATGTGAGTTCTGTTAACTTCACTTACCTTCCCCCTCCCCCTCACCTGTTCTCTTTTGACCCTTTACTTTATGGCAGGGGTGGGTTGAGAGTGTCTTGCTTCTATTATGAACTCTAACCATGTGAAACGCGATTAGTTAACCAGTATTTAATATGATTCCAGCTGCTGTTGATTTTGATTTAGACCTGTTGGGTTGGGAGTTTCTTTTGATTGGGTCTGAACGACCATTTCATCTCGTAGTCCTATAAGCCCCCCTGTTTTTATCGAAATTATGATTCATGTTATTTTTGTCCATATTGATATTTTAATTGGTAGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGGTGAGAACCATGTTGATGTTCTTTGATACTACTGTATTGAGCCTGCTAGTTATAGTTCATCAAATTTATTTCATTAACAAGAAAACTCCAAAGTTTTATGCTATGTTTTCAGGCGTTGGTGTCCAAATGTAGATTCCAAAATTTTTATTAATGTTTTCATTCTTCAAGTTGTCTTGTTGGAGGATTTAAATTTGAGGACAAAAGGTGTATAGTTGAAATAACTGACCATATCATATCTTGTAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTATGGGCACGCCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCATCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTGCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAGGAAAGTCGATAATGAAGTAGCTCATTAAAGAACACAGCAGTATCCTACTGAGGTAAGCATGTCTGAGGATAAAAATAGTGTATTCACATTTAGATCCCACCCCTCTTGACTCATATGTTCTTTTAAAGCATGGAATACGATAGTTTGAAATTTCTAACAATTTTCATTTCTCAGAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGTAAGTGCATAACTAGCTTATAATGTTGTTGATTTTAACGTAGTTATACATTATCATCCTCGTTCTTGAAGCTTATGTTAGCGTCTTTGCACTTTTCTGTAGGATTTTTTTTTTTTCCTTCGTAGGAACCACTTTAAGGAAGATCATTGGAGAGGTCTGACTATAATCTACTGTAAGTTGATAGCTTCCTACTGGAATGTATAATGAGAAGAGATGATGAATCCATAATCTCCTAGTTTGATTAAAGATGAGCTTGTTAATTATCACCGTTCTGCAGTGTTGTTAGGGTTATTATCAGGATAGATGTTAGAAATAGTAGGTTAAATTATACCCTTAAATTTTGGGTTAGGTTTAAATTATGCACCTGGACTTTGAAAAGCTTCATTTTTTAC

mRNA sequence

AACCGCCGTCGAAGGCCAAGGCGAACGGAGTTCTCTACAAATTACAGCACTTCCAATCGGAGACGGCCGGTTTCATTTTTCCAGCCGACTGAACTTCACCAAGAAACGGCCGGAGCAGTTTTCCATTTCTCTTTCAACTCCGGTATTTTCTTGTTTTCAAGAAACATGGACAATGAAACCCGACGGAGAATCAAGGAAACGGTGATTGACTTATTGAAGATATCGAACATGGAAGAGATGACGGAGTACAAAATTCGAGCCGAGGCCGAAAAACGGCTCGGAATGGATCTCTCCGATATTCAATGCAAGTGCCTGGTGAGGGACGTGGTCGAGGACTTTTTACATTCATTTACGGAACGTGATGATAAGGGAAAAGAGGGAGAACCAGGGCCTAGTGATCGTTACGAGAATAAAGCGACGGAGCAGGAGATAGTCCGGAAGAAGGAGATTAACGCTGATGTTGACCGTGTGATTTGCCAGCTATCTAATAACAGGAATGTGACAGTTCATGAATTTAAAGGGAACGCTCTGGTATCAATTAGGCAGTATTATGAAAAAGATGGAAAACAGCTTCCTGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTATGGGCACGCCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCATCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTGCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAGGAAAGTCGATAATGAAGTAGCTCATTAAAGAACACAGCAGTATCCTACTGAGAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGATTTTTTTTTTTTCCTTCGTAGGAACCACTTTAAGGAAGATCATTGGAGAGGTCTGACTATAATCTACTGTAAGTTGATAGCTTCCTACTGGAATGTATAATGAGAAGAGATGATGAATCCATAATCTCCTAGTTTGATTAAAGATGAGCTTGTTAATTATCACCGTTCTGCAGTGTTGTTAGGGTTATTATCAGGATAGATGTTAGAAATAGTAGGTTAAATTATACCCTTAAATTTTGGGTTAGGTTTAAATTATGCACCTGGACTTTGAAAAGCTTCATTTTTTAC

Coding sequence (CDS)

ATGGACAATGAAACCCGACGGAGAATCAAGGAAACGGTGATTGACTTATTGAAGATATCGAACATGGAAGAGATGACGGAGTACAAAATTCGAGCCGAGGCCGAAAAACGGCTCGGAATGGATCTCTCCGATATTCAATGCAAGTGCCTGGTGAGGGACGTGGTCGAGGACTTTTTACATTCATTTACGGAACGTGATGATAAGGGAAAAGAGGGAGAACCAGGGCCTAGTGATCGTTACGAGAATAAAGCGACGGAGCAGGAGATAGTCCGGAAGAAGGAGATTAACGCTGATGTTGACCGTGTGATTTGCCAGCTATCTAATAACAGGAATGTGACAGTTCATGAATTTAAAGGGAACGCTCTGGTATCAATTAGGCAGTATTATGAAAAAGATGGAAAACAGCTTCCTGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTATGGGCACGCCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCATCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTGCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAG

Protein sequence

MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLHSFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGNALVSIRQYYEKDGKQLPGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPCMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK

Homology

[Close]

BLAST of CmoCh06G010340 vs. ExPASy Swiss-Prot
Match: O65155 (RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana OX=3702 GN=KELP PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.6e-32
Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ET+ +I++TVI++L  S+M+E+TE+K+R  A ++L +DLS+   K  VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
                +++ +E E    ++ E    +      KE + D D +IC+LS+ R VT+ EFKG 
Sbjct: 61  -----EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGK 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKI 168
           +LVSIR+YY+KDGK+LP   GISLT EQWS F+ N+PAIE A+ +M+ ++
Sbjct: 121 SLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165

[Close]

BLAST of CmoCh06G010340 vs. ExPASy Swiss-Prot
Match: O65154 (RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana OX=3702 GN=KIWI PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-07
Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 63  TERDDKGKEGEPGPSDRYENKATEQEIVR-KKEINADVDRVICQLSNNRNVTVHEFKGNA 122
           + R  +  E      D  E  A  +++ +   + +   D V+C +S NR V+V  + G  
Sbjct: 2   SSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61

Query: 123 LVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAI 161
            + IR++Y KDGK LP   GISL+ +QW+  R++   IE+A+
Sbjct: 62  WIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKAL 103

[Close]

BLAST of CmoCh06G010340 vs. ExPASy Swiss-Prot
Match: Q9FHX8 (Mediator-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g42060 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1  MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFL 60
          +D + RR+IK+TV  +L+ SN+ ++TE K R EA  +L +DLS    K +V++ VE+FL
Sbjct: 11 IDKDLRRKIKKTVKKILESSNLYKITEIKAREEASLKLDLDLSQDPYKVIVKEEVENFL 69

[Close]

BLAST of CmoCh06G010340 vs. ExPASy Swiss-Prot
Match: P53999 (Activated RNA polymerase II transcriptional coactivator p15 OS=Homo sapiens OX=9606 GN=SUB1 PE=1 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05
Identity = 28/92 (30.43%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 76  PSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGNALVSIRQYY-EKDGK 135
           P  + +   T + +   K+ ++  D  + Q+   R V+V +FKG  L+ IR+Y+ + +G+
Sbjct: 36  PVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGE 95

Query: 136 QLP---GISLTTEQWSAFRSNIPAIEEAILQM 164
             P   GISL  EQWS  +  I  I++A+ ++
Sbjct: 96  MKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127

[Close]

BLAST of CmoCh06G010340 vs. ExPASy Swiss-Prot
Match: Q4R947 (Activated RNA polymerase II transcriptional coactivator p15 OS=Macaca fascicularis OX=9541 GN=SUB1 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05
Identity = 28/92 (30.43%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 76  PSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGNALVSIRQYY-EKDGK 135
           P  + +   T + +   K+ ++  D  + Q+   R V+V +FKG  L+ IR+Y+ + +G+
Sbjct: 36  PVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGE 95

Query: 136 QLP---GISLTTEQWSAFRSNIPAIEEAILQM 164
             P   GISL  EQWS  +  I  I++A+ ++
Sbjct: 96  MKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127

[Close]

BLAST of CmoCh06G010340 vs. ExPASy TrEMBL
Match: A0A6J1G0Z2 (uncharacterized protein LOC111449676 OS=Cucurbita moschata OX=3662 GN=LOC111449676 PE=3 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 8.3e-252
Identity = 446/449 (99.33%), Postives = 446/449 (99.33%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH
Sbjct: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN
Sbjct: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
           ALVSIRQYYEKDGKQLP   GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS
Sbjct: 121 ALVSIRQYYEKDGKQLPGIKGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
           GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS
Sbjct: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG 300
           SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG
Sbjct: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG 300

Query: 301 TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTN 360
           TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTN
Sbjct: 301 TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTN 360

Query: 361 VFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPCMNHRRKMGDQMSQSLPSRK 420
           VFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPCMNHRRKMGDQMSQSLPSRK
Sbjct: 361 VFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPCMNHRRKMGDQMSQSLPSRK 420

Query: 421 REWKMDVKTLLCLNCGKEGHISRDCPSSK 447
           REWKMDVKTLLCLNCGKEGHISRDCPSSK
Sbjct: 421 REWKMDVKTLLCLNCGKEGHISRDCPSSK 449

[Close]

BLAST of CmoCh06G010340 vs. ExPASy TrEMBL
Match: A0A0A0L3U5 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119510 PE=3 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 1.0e-156
Identity = 302/459 (65.80%), Postives = 364/459 (79.30%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRRRI+E VI++LK S+ME+ TE+K+R++ E+RLG+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRRIEENVIEVLKKSSMEDTTEFKVRSQVEERLGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYENKA EQ+IV KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENKAVEQKIVPKKEFNDDGDLLICRLSNNRSVTIHKFKGA 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VS+RQYYEKDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA   
Sbjct: 121 PMVSVRQYYEKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDAEKI 180

Query: 181 GAVSVPATG-SAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPES 240
           GA S P T  ++PK+P ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ES
Sbjct: 181 GAFSNPTTRVTSPKYPIETIRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEES 240

Query: 241 SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-D 300
           SSGN ++SKA+EQ+WM DDHMCR  ILNSLSD LF++Y+K+TMSA ELWKEL  LYL  +
Sbjct: 241 SSGNAAQSKAAEQKWMRDDHMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEE 300

Query: 301 YGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSW 360
           +GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI S+G  IDEDFHVSAIISKLP SW
Sbjct: 301 FGTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSW 360

Query: 361 TNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPCMNHRRKMGD 420
            NV+V LM E++LP   L DRLR EE+LRTQ+NS  SG        G+    NH  KMGD
Sbjct: 361 KNVWVNLMHEQYLPLRKLTDRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGD 420

Query: 421 QMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
               ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 PKPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 458

[Close]

BLAST of CmoCh06G010340 vs. ExPASy TrEMBL
Match: A0A5A7TZ44 (Zinc knuckle family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00980 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 7.2e-155
Identity = 296/458 (64.63%), Postives = 361/458 (78.82%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRR+I+E VI++LK SN+E+ TE+K+R++ E+R+G+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRKIEENVIEVLKQSNIEDTTEFKVRSQVEERIGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYEN+A EQ+I+ KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENRAVEQKIIPKKEFNDDGDLLICRLSNNRSVTIHKFKGE 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VSIRQYY KDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  
Sbjct: 121 RMVSIRQYYAKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDADKI 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
           GA+S P   + PKFP ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ESS
Sbjct: 181 GAISNPTRVTYPKFPIETIRFDGKNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDY 300
           SGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++
Sbjct: 241 SGNAAQSKVAEQKWMSDDHMCHRNILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEF 300

Query: 301 GTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWT 360
           GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG  IDEDFHVSAIISKLP SW 
Sbjct: 301 GTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWK 360

Query: 361 NVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPCMNHRRKMGDQ 420
           NV++ LM+E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD 
Sbjct: 361 NVWMSLMQEHYLPLSKLTDRLRIEEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDP 420

Query: 421 MSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
           M  ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 MPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 457

[Close]

BLAST of CmoCh06G010340 vs. ExPASy TrEMBL
Match: A0A1S3AV18 (uncharacterized protein LOC103483179 OS=Cucumis melo OX=3656 GN=LOC103483179 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 7.2e-155
Identity = 296/458 (64.63%), Postives = 361/458 (78.82%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRR+I+E VI++LK SN+E+ TE+K+R++ E+R+G+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRKIEENVIEVLKQSNIEDTTEFKVRSQVEERIGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYEN+A EQ+I+ KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENRAVEQKIIPKKEFNDDGDLLICRLSNNRSVTIHKFKGE 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VSIRQYY KDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  
Sbjct: 121 RMVSIRQYYAKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDADKI 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
           GA+S P   + PKFP ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ESS
Sbjct: 181 GAISNPTRVTYPKFPIETIRFDGKNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDY 300
           SGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++
Sbjct: 241 SGNAAQSKVAEQKWMSDDHMCHRNILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEF 300

Query: 301 GTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWT 360
           GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG  IDEDFHVSAIISKLP SW 
Sbjct: 301 GTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWK 360

Query: 361 NVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPCMNHRRKMGDQ 420
           NV++ LM+E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD 
Sbjct: 361 NVWMSLMQEHYLPLSKLTDRLRIEEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDP 420

Query: 421 MSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
           M  ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 MPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 457

[Close]

BLAST of CmoCh06G010340 vs. ExPASy TrEMBL
Match: A0A5D3DBA1 (Zinc knuckle family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00970 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 9.4e-155
Identity = 296/458 (64.63%), Postives = 360/458 (78.60%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRR+I+E VI++LK SN+E+ TE+K+R++ E+R+G+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRKIEENVIEVLKQSNIEDTTEFKVRSQVEERIGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYEN+A EQ+I+ KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENRAVEQKIIPKKEFNDDGDLLICRLSNNRSVTIHKFKGE 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VSIRQYY KDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  
Sbjct: 121 RMVSIRQYYAKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDADKI 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
           GA+S P   + PKFP ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ESS
Sbjct: 181 GAISNPTRVTYPKFPIETIRFDGKNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDY 300
           SGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++
Sbjct: 241 SGNAAQSKVAEQKWMSDDHMCHRNILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEF 300

Query: 301 GTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWT 360
           GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG  IDEDFHVSAIISKLP SW 
Sbjct: 301 GTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWK 360

Query: 361 NVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPCMNHRRKMGDQ 420
           NV++ LM E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD 
Sbjct: 361 NVWMSLMHEHYLPLSKLTDRLRIEEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDP 420

Query: 421 MSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
           M  ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 MPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 457

[Close]

BLAST of CmoCh06G010340 vs. TAIR 10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 293.5 bits (750), Expect = 2.9e-79
Identity = 181/457 (39.61%), Postives = 273/457 (59.74%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+    ++I+ETV  +L  S+M++MTE+K+R +A  +LG+DLS    K LVRDV+E FL 
Sbjct: 12  MEIVATQKIEETVKSILSESDMDQMTEFKLRLDASAKLGIDLSGTNHKKLVRDVLEVFLL 71

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S          GE    +       E   V    +  + +R IC+LS  +N TV  ++G 
Sbjct: 72  S--------TPGEALVPETVAPAKNETVSVAAASVGGEDERFICKLSEKQNATVQRYRGQ 131

Query: 121 ALVSIRQYYEKDGKQLPGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAV 180
             +SI    ++ GK   G  L+T QWS  + N  AIE+ I Q + K+K SE   N   + 
Sbjct: 132 PFLSIGS--QEHGKAFRGAHLSTNQWSVIKKNFAAIEDGIKQCQSKLK-SEAARNGDTSE 191

Query: 181 SVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPT--SMLGPESSS 240
           +V    S      +  RFDGK+Y  WA QME  L++LK+ YVLS+  P+  S  GPE++ 
Sbjct: 192 AVDKDSSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNP 251

Query: 241 GNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG- 300
              +R+ A+ ++W+ DD++C   ++NSLSD L+ +Y+++   A+ELW EL  +Y CD   
Sbjct: 252 REITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESK 311

Query: 301 TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTN 360
           ++RSQV+KY+EFRMVEE+ ILEQV+  N IA+SI+SAGM +DE FHVS IISK PPSW  
Sbjct: 312 SKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRG 371

Query: 361 VFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPC-----MNHRRKMG--DQMS 420
              +LM EE+LP  +L++R++ EE+L   +N  +    RP      M     +G   + S
Sbjct: 372 FCTRLMEEEYLPVWMLMERVKAEEEL--LRNGAKGVTYRPATGSSQMERTPSLGTTHRGS 431

Query: 421 QSLPSRKREWKMDVKTLL-CLNCGKEGHISRDCPSSK 447
           QS+  +++E + D + ++ C NCG++GH+++ C  SK
Sbjct: 432 QSVGWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSK 455

[Close]

BLAST of CmoCh06G010340 vs. TAIR 10
Match: AT4G10920.1 (transcriptional coactivator p15 (PC4) family protein (KELP) )

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-33
Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ET+ +I++TVI++L  S+M+E+TE+K+R  A ++L +DLS+   K  VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
                +++ +E E    ++ E    +      KE + D D +IC+LS+ R VT+ EFKG 
Sbjct: 61  -----EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGK 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKI 168
           +LVSIR+YY+KDGK+LP   GISLT EQWS F+ N+PAIE A+ +M+ ++
Sbjct: 121 SLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165

[Close]

BLAST of CmoCh06G010340 vs. TAIR 10
Match: AT4G10920.2 (transcriptional coactivator p15 (PC4) family protein (KELP) )

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-33
Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ET+ +I++TVI++L  S+M+E+TE+K+R  A ++L +DLS+   K  VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
                +++ +E E    ++ E    +      KE + D D +IC+LS+ R VT+ EFKG 
Sbjct: 61  -----EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGK 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKI 168
           +LVSIR+YY+KDGK+LP   GISLT EQWS F+ N+PAIE A+ +M+ ++
Sbjct: 121 SLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165

[Close]

BLAST of CmoCh06G010340 vs. TAIR 10
Match: AT5G09250.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-08
Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 63  TERDDKGKEGEPGPSDRYENKATEQEIVR-KKEINADVDRVICQLSNNRNVTVHEFKGNA 122
           + R  +  E      D  E  A  +++ +   + +   D V+C +S NR V+V  + G  
Sbjct: 2   SSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61

Query: 123 LVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAI 161
            + IR++Y KDGK LP   GISL+ +QW+  R++   IE+A+
Sbjct: 62  WIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKAL 103

[Close]

BLAST of CmoCh06G010340 vs. TAIR 10
Match: AT1G64490.1 (DEK, chromatin associated protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.4e-06
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 1  MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFL 60
          +DN+ +++IKETV  +LK S++ E+TE K R EA   L +DLS    K +VR+ V+ F+
Sbjct: 11 IDNDLKKKIKETVKKILKRSSLLEITEIKAREEASSELNLDLSRDPYKIIVREAVDSFI 69

The following BLAST results are available for this feature:

BLAST of CmoCh06G010340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65155	2.6e-32	44.71	RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana OX=37...	[more]
O65154	2.2e-07	32.35	RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana OX=37...	[more]
Q9FHX8	4.5e-05	44.07	Mediator-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g42060 PE=1 ...	[more]
P53999	4.5e-05	30.43	Activated RNA polymerase II transcriptional coactivator p15 OS=Homo sapiens OX=9...	[more]
Q4R947	4.5e-05	30.43	Activated RNA polymerase II transcriptional coactivator p15 OS=Macaca fascicular...	[more]

BLAST of CmoCh06G010340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0Z2	8.3e-252	99.33	uncharacterized protein LOC111449676 OS=Cucurbita moschata OX=3662 GN=LOC1114496...	[more]
A0A0A0L3U5	1.0e-156	65.80	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119510 P...	[more]
A0A5A7TZ44	7.2e-155	64.63	Zinc knuckle family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AV18	7.2e-155	64.63	uncharacterized protein LOC103483179 OS=Cucumis melo OX=3656 GN=LOC103483179 PE=...	[more]
A0A5D3DBA1	9.4e-155	64.63	Zinc knuckle family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of CmoCh06G010340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00980.1	2.9e-79	39.61	zinc knuckle (CCHC-type) family protein	[more]
AT4G10920.1	1.8e-33	44.71	transcriptional coactivator p15 (PC4) family protein (KELP)	[more]
AT4G10920.2	1.8e-33	44.71	transcriptional coactivator p15 (PC4) family protein (KELP)	[more]
AT5G09250.1	1.5e-08	32.35	ssDNA-binding transcriptional regulator	[more]
AT1G64490.1	1.4e-06	44.07	DEK, chromatin associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 428..444 e-value: 6.8E-6 score: 35.6
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 429..444 e-value: 2.9E-6 score: 27.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 429..444 score: 11.13617
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 251..385 e-value: 7.7E-17 score: 61.4
None	No IPR available	GENE3D	4.10.60.10		coord: 416..446 e-value: 1.1E-6 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..247
None	No IPR available	PANTHER	PTHR47592:SF6	PBF68 PROTEIN	coord: 1..441
None	No IPR available	PANTHER	PTHR47592	PBF68 PROTEIN	coord: 1..441
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 5..59 e-value: 2.0E-8 score: 34.0
IPR003173	Transcriptional coactivator p15 (PC4), C-terminal	PFAM	PF02229	PC4	coord: 104..151 e-value: 2.6E-17 score: 62.2
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 94..169 e-value: 3.7E-22 score: 79.7
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 103..161
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 415..444

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010340.1	CmoCh06G010340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding