CmoCh06G010190 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G010190
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionwiskott-Aldrich syndrome protein family member 2-like
LocationCmo_Chr06: 7995774 .. 7997005 (-)
RNA-Seq ExpressionCmoCh06G010190
SyntenyCmoCh06G010190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTTTTCAATATATTTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCTGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCGCCGCCACCACCTCTCGCTCTGCCGCCTACCCAATTCACAGCCGTTAATGAAACCACCACTCAACCCAGGTATTAAATTACCTAAAAAAGCTTAATAATTAAGCTAAATTAATTTTAATTTCAAACGATTTAGGTTTGAAATTAGAGCAATAAATTGATACAAGATATTTGATTTATTTAAAAAAAAAAAAATTATTTATATGATCGATAACAGAATTCAGCCGGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCTGGTGAAGTCTGATCGGCCATCGGAGTATGGCTCGGGAAAGCCATATGAAAAGCAGAAGGCAGTGGAGTCTATAAACCTCGCCGGACATAACGTAGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGGCCGGGATGGAAATGAGGAGAAGAAAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAAAAGAAGAATGTGCCAATGACCGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGGCGTAAGAGTTACAAGGCATAGAGATAATGGCTCGTGAAGTATTTAAGTATAAGAAATAAGCCATTTACTTGGCGTTTAAAAAAAAAAAAAAAGAAGAAAAGCCATTTACTTGGACTCTTATTTAAGGTTATAATCGATATGAATAAAAATATATGACACAAATTCAATATTTATTTCATCTTTG

mRNA sequence

GGCTTTTCAATATATTTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCTGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCGCCGCCACCACCTCTCGCTCTGCCGCCTACCCAATTCACAGCCGTTAATGAAACCACCACTCAACCCAGAATTCAGCCGGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCTGGTGAAGTCTGATCGGCCATCGGAGTATGGCTCGGGAAAGCCATATGAAAAGCAGAAGGCAGTGGAGTCTATAAACCTCGCCGGACATAACGTAGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGGCCGGGATGGAAATGAGGAGAAGAAAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAAAAGAAGAATGTGCCAATGACCGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGGCGTAAGAGTTACAAGGCATAGAGATAATGGCTCGTGAAGTATTTAAGTATAAGAAATAAGCCATTTACTTGGCGTTTAAAAAAAAAAAAAAAGAAGAAAAGCCATTTACTTGGACTCTTATTTAAGGTTATAATCGATATGAATAAAAATATATGACACAAATTCAATATTTATTTCATCTTTG

Coding sequence (CDS)

ATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCTGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCGCCGCCACCACCTCTCGCTCTGCCGCCTACCCAATTCACAGCCGTTAATGAAACCACCACTCAACCCAGAATTCAGCCGGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCTGGTGAAGTCTGATCGGCCATCGGAGTATGGCTCGGGAAAGCCATATGAAAAGCAGAAGGCAGTGGAGTCTATAAACCTCGCCGGACATAACGTAGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGGCCGGGATGGAAATGAGGAGAAGAAAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAAAAGAAGAATGTGCCAATGACCGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGGCGTAAGAGTTACAAGGCATAG

Protein sequence

MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEKKKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA
Homology
BLAST of CmoCh06G010190 vs. ExPASy TrEMBL
Match: A0A6J1GHE5 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111454206 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.6e-150
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPT 120
           GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPT
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPT 120

Query: 121 QFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAG 180
           QFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAG
Sbjct: 121 QFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEKKKKEKKKKNVPMTAFM 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEKKKKEKKKKNVPMTAFM
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEKKKKEKKKKNVPMTAFM 240

Query: 241 NSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 288
           NSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA
Sbjct: 241 NSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 287

BLAST of CmoCh06G010190 vs. ExPASy TrEMBL
Match: A0A6J1ICG8 (wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=3661 GN=LOC111473600 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.5e-125
Identity = 253/289 (87.54%), Postives = 263/289 (91.00%), Query Frame = 0

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFG  RQRPS+AAPPVLPTTLPAAE KPET PFY+ SQ+LQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGRPRQRPSVAAPPVLPTTLPAAEHKPETLPFYRTSQTLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPT 120
           GPSVT VPSPPP KDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTS PPPPPPLALPPT
Sbjct: 61  GPSVTLVPSPPPAKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTS-PPPPPPLALPPT 120

Query: 121 QFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAG 180
            FTA +  TTQPRIQ EVEKKSIVYNKTVEK VKSDRP EYGSGK +EKQK  ESINLAG
Sbjct: 121 HFTAKDGNTTQPRIQTEVEKKSIVYNKTVEKPVKSDRPLEYGSGKSHEKQKTAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEG--GGRDGNEEKKKEEKKKKEKKKKNVPMTA 240
           HNVGAVMEIDK S  HRLGGETVRKN+TEG  GGRDGNEEKKK  K+KK+KKKK VPMTA
Sbjct: 181 HNVGAVMEIDKLSASHRLGGETVRKNKTEGGDGGRDGNEEKKK--KEKKDKKKKKVPMTA 240

Query: 241 FMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 288
           FMNSNFQSVNNSVLYDSSC+HRDPGLHLKFADAADGDGAAVDGRK+YKA
Sbjct: 241 FMNSNFQSVNNSVLYDSSCNHRDPGLHLKFADAADGDGAAVDGRKNYKA 286

BLAST of CmoCh06G010190 vs. ExPASy TrEMBL
Match: A0A6J1GDX3 (wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453294 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.8e-97
Identity = 213/275 (77.45%), Postives = 227/275 (82.55%), Query Frame = 0

Query: 21  VLPTTLPAAEL--KPETQPFYKRSQS----LQPAEKPTSPIASPKYGPSVTRVPSPPPPK 80
           V P  LP  EL  KP  +P      S      PA+KP SPIASPKYG SVTRVPSPPPPK
Sbjct: 11  VPPLKLPTIELKKKPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPK 70

Query: 81  DE-LSPPVSPAKKYPDR-LSQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNETTTQP 140
           DE LSPPVSPAKKYPDR ++QTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVN TTTQP
Sbjct: 71  DELLSPPVSPAKKYPDRWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQP 130

Query: 141 RIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAGHNVGAVMEIDKS 200
           +IQPE+E+KSIVYNKTVEK  K DR SEYGSGKP+EKQKA E+INLAGHNVGAVMEIDKS
Sbjct: 131 KIQPEIEQKSIVYNKTVEKPAKFDRASEYGSGKPHEKQKAAEAINLAGHNVGAVMEIDKS 190

Query: 201 SVGHRLGGETVRKNETEGGGRDGNEEKKKEEKKKKEKKKKNVPMTAFMNSNFQSVNNSVL 260
           SVGHRLGGETVR     G  RDGNEEKKK+EKK+       +PMTAF NSNFQSVNNSVL
Sbjct: 191 SVGHRLGGETVR-----GSVRDGNEEKKKKEKKE-------LPMTAFTNSNFQSVNNSVL 250

Query: 261 YDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 288
           Y SSC+HRDPGLHLKFADAADGDGAA DGRK+YKA
Sbjct: 251 YGSSCNHRDPGLHLKFADAADGDGAAADGRKNYKA 273

BLAST of CmoCh06G010190 vs. ExPASy TrEMBL
Match: A0A5A7TZ24 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.9e-61
Identity = 166/302 (54.97%), Postives = 197/302 (65.23%), Query Frame = 0

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPF----------YKRSQSLQPAEK 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKS-R 120

Query: 121 TSPPPPPPPLALPPTQFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPS-EYGSG 180
            +  PP  PLALP  Q    N TT QPR+QPEVE K IVYNKTVEK  KS+R S EYGS 
Sbjct: 121 RAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSS 180

Query: 181 KPYEKQKAVESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEK 240
           K ++K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE     G+      E 
Sbjct: 181 KSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETED---VGDVHGYGHED 240

Query: 241 KKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKS 287
           KK E KKK  P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA VDG+KS
Sbjct: 241 KKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKS 298

BLAST of CmoCh06G010190 vs. ExPASy TrEMBL
Match: A0A1S3AV38 (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.9e-61
Identity = 166/302 (54.97%), Postives = 197/302 (65.23%), Query Frame = 0

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPF----------YKRSQSLQPAEK 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKS-R 120

Query: 121 TSPPPPPPPLALPPTQFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPS-EYGSG 180
            +  PP  PLALP  Q    N TT QPR+QPEVE K IVYNKTVEK  KS+R S EYGS 
Sbjct: 121 RAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSS 180

Query: 181 KPYEKQKAVESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEK 240
           K ++K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE     G+      E 
Sbjct: 181 KSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETED---VGDVHGYGHED 240

Query: 241 KKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKS 287
           KK E KKK  P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA VDG+KS
Sbjct: 241 KKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKS 298

BLAST of CmoCh06G010190 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 6.9e-10
Identity = 97/331 (29.31%), Postives = 129/331 (38.97%), Query Frame = 0

Query: 5   PRFGLSRQRPSMAAPPVLP-----TTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPK 64
           PR    R  P    PP  P        P  +  P T P  +RS    P  +  SP   PK
Sbjct: 49  PRQRQPRSPPRQQDPPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPK 108

Query: 65  YG--------PSVTRVPSPP------PPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLR 124
                      S T  PSP       PP+   SPP SPA       S++   +SPS S  
Sbjct: 109 AATPPPPPPRSSYTSPPSPKEVQEALPPRKPNSPP-SPAHSSRSTTSESVKTRSPSESEN 168

Query: 125 TSPPPPP---PPLALPPTQFTAVNETTTQPRIQPEVEKKSIV-------YNKTVEKLVKS 184
               P P    P +LP +   +  ETT +  +  E   ++         +N    +    
Sbjct: 169 HRKAPSPRVLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNHHNQNHNHDYNQNHNY 228

Query: 185 DRPSEYG-----------------SGKPYEKQKAVESINLAGHNVGAVMEIDKSSVGHRL 244
           ++   Y                  S    E   +   I +AG N GAVMEI +S  G++ 
Sbjct: 229 NQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKT 288

Query: 245 GGETVRKNETEGG----GR----------DGNEEKKKEEKKKKEKKKKNVPMTAFMNSNF 276
           GG     +    G    GR          D  E KKK  K    K   N+PM AFMNSN 
Sbjct: 289 GGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNSNV 348

BLAST of CmoCh06G010190 vs. TAIR 10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH )

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 33/105 (31.43%), Postives = 50/105 (47.62%), Query Frame = 0

Query: 164 GKPYEKQKAVESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEE 223
           GK     K+V    L G N GA M I  S    + G   +R+          N    + E
Sbjct: 334 GKSNGDDKSVSVYTLTGENKGATMGIG-SEKDKKDGEVHIRRGYRSNPDESSNTTATETE 393

Query: 224 KKKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKF 269
             K ++ ++    TA++N N Q +NNS++ +SS S  DPG+H+ F
Sbjct: 394 NPKDDEAEEEASFTAYINGNTQGINNSIVVESSVSENDPGVHMSF 437

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GHE57.6e-150100.00sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1ICG86.5e-12587.54wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=366... [more]
A0A6J1GDX35.8e-9777.45wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita moschata OX=3... [more]
A0A5A7TZ243.9e-6154.97Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=... [more]
A0A1S3AV383.9e-6154.97zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G46630.16.9e-1029.31unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... [more]
AT1G75260.11.5e-0431.43oxidoreductases, acting on NADH or NADPH [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102
NoneNo IPR availablePANTHERPTHR33472:SF1EXTENSIN-RELATEDcoord: 170..270
NoneNo IPR availablePANTHERPTHR33472OS01G0106600 PROTEINcoord: 170..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G010190.1CmoCh06G010190.1mRNA