CmoCh06G009040 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAAGCTCTCTTCACCCATTGCCCTCCTCCTCCTCGTCAACCTCCTCTTCTTCACTATGGTCATCTCCACGTATGTCCCTTGCCCACCGCCGCCACCCAAGCCCCACAAGCCTACCCCTTTAAGGCAGCCACCATCAATCCTCAAGTGCCCCAAGGACACCCTAAAGCTCGGCGTCTGCGCCGACTTGCTGGACGGTCTAGTGCATGTAGTGATCGGTTCACCACCAAAATCCCCATGTTGCACCCTAATCCAAGGCCTTGTTGACCTGGAAGCTGTTGTGTGCCTTTGCACTGCGGTGAAGGCTAGAGCCTTGGGTCTCCAGTTGACCTCTCAGTTTCCCTCAGCTTGCTTTTGA ATGGCTTCCAAGCTCTCTTCACCCATTGCCCTCCTCCTCCTCGTCAACCTCCTCTTCTTCACTATGGTCATCTCCACGTATGTCCCTTGCCCACCGCCGCCACCCAAGCCCCACAAGCCTACCCCTTTAAGGCAGCCACCATCAATCCTCAAGTGCCCCAAGGACACCCTAAAGCTCGGCGTCTGCGCCGACTTGCTGGACGGTCTAGTGCATGTAGTGATCGGTTCACCACCAAAATCCCCATGTTGCACCCTAATCCAAGGCCTTGTTGACCTGGAAGCTGTTGTGTGCCTTTGCACTGCGGTGAAGGCTAGAGCCTTGGGTCTCCAGTTGACCTCTCAGTTTCCCTCAGCTTGCTTTTGA ATGGCTTCCAAGCTCTCTTCACCCATTGCCCTCCTCCTCCTCGTCAACCTCCTCTTCTTCACTATGGTCATCTCCACGTATGTCCCTTGCCCACCGCCGCCACCCAAGCCCCACAAGCCTACCCCTTTAAGGCAGCCACCATCAATCCTCAAGTGCCCCAAGGACACCCTAAAGCTCGGCGTCTGCGCCGACTTGCTGGACGGTCTAGTGCATGTAGTGATCGGTTCACCACCAAAATCCCCATGTTGCACCCTAATCCAAGGCCTTGTTGACCTGGAAGCTGTTGTGTGCCTTTGCACTGCGGTGAAGGCTAGAGCCTTGGGTCTCCAGTTGACCTCTCAGTTTCCCTCAGCTTGCTTTTGA MASKLSSPIALLLLVNLLFFTMVISTYVPCPPPPPKPHKPTPLRQPPSILKCPKDTLKLGVCADLLDGLVHVVIGSPPKSPCCTLIQGLVDLEAVVCLCTAVKARALGLQLTSQFPSACF Homology
BLAST of CmoCh06G009040 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.6e-24 Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.9e-20 Identity = 59/137 (43.07%), Postives = 79/137 (57.66%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.5e-19 Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18 Identity = 61/158 (38.61%), Postives = 78/158 (49.37%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.8e-18 Identity = 60/153 (39.22%), Postives = 78/153 (50.98%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy TrEMBL
Match: A0A6J1G3L7 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111450447 PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy TrEMBL
Match: A0A6J1G110 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111449686 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.4e-51 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy TrEMBL
Match: A0A6J1G0R5 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111449616 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.9e-50 Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy TrEMBL
Match: A0A6J1FVW6 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111448592 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.9e-50 Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of CmoCh06G009040 vs. ExPASy TrEMBL
Match: A0A6J1G112 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111449700 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.4e-50 Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of CmoCh06G009040 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28 Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of CmoCh06G009040 vs. TAIR 10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 117.5 bits (293), Expect = 7.5e-27 Identity = 65/126 (51.59%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CmoCh06G009040 vs. TAIR 10
Match: AT1G12090.1 (extensin-like protein ) HSP 1 Score: 110.5 bits (275), Expect = 9.2e-25 Identity = 65/113 (57.52%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of CmoCh06G009040 vs. TAIR 10
Match: AT5G46900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23 Identity = 62/105 (59.05%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of CmoCh06G009040 vs. TAIR 10
Match: AT4G22460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 6.6e-23 Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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