CmoCh06G008930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G008930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GrpE protein homolog
Location	Cmo_Chr06: 5255599 .. 5258884 (-)
RNA-Seq Expression	CmoCh06G008930
Synteny	CmoCh06G008930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCAATTTGACTCAGCCACCACAAAACCCTCGCTCCCGTGTCCGTCTCCTGTGATCTCCTCCTCAGCCACATTCTTCTCTTCATTTCCTTCCAGTTTTCTCTGCCTGAAAAGCCTTCAACTCCGATCTTCCTTTTCAGTTTTAATCACCTTCCTTGTTAGCTATGATCGTCACCAAGCTTTTCTCACGCGCCTCCCGCAGCATTTGCCGGAGCTCGCTTCTCTCCTCGGCCTCGCAATCCAATCAAACCGCACACTTCTCGCCAATTCTATCCAATCGCTTTCATTGTCTTGCTAACGAATCCATCAATAAGGTACGCCCTAAACACCTTCCACTTACAAGGATTTGTTTTCTGCTATTAGGGTTTAGTTAGGGTTTTGGGTTTTTCTCGAAATTTCCTATGTAAGAGAGGCGTATGAATTTCAATTTCTTCCCCCTTTTTTTATATGAGGTTTTGTAAGACTTTTGTCGCAATTTTTTTGTTATTATATGCTTTTGAACCTCCCGTCTATTTTTGTTCTGTTTCTGGGTATCTTGAATTCGTTATTATTTATGTCAATTTTACTAATGTTCCTTTAATTAGATAGCCTCTAGTTGTGGGTGTGGCTTGGAATTAGTTTACCTTTGTTCTCAGTTTTTTTTCTTTTTTCTTTTTTCCTTTTATTATTGGGAATCCATTGGGATTTATTGCTTAGTTTCTGGTTACTTGTTTGGTCTTCTTAGAGAACGTTAAATAATAAAACTTTCATTCATTGGCCTAATGTGCCCAGGTCTATTCTTTTTCTGCTCAGGAATCTGCGTTATATAATTCATTTTTCCTTCATAAATTCGGATTATCAACGTTTGCATCCCCTGAGACTCCTGATAAGGAAAATGGTGATTCTGTACGAAGTAATGGCAGCTCTTCTGCTGCTGCAGAGCCGACGGCTGAATCTAATGGTCAAACCAAAGAATCAGGTTCATATTTGGATGTTGGTTTTCAATGCCTGCCTTAATTGACAAGTGGTAACAAACTCTGCTTTCTGATTCAGATTCTGAGAGTGATGACAATCTCACCATGGATGATCTGGTGAAAGTTGTGGCTGAGAAGGAAGAGCTTTTGAAATTAAAGCATAAAGAGATTGAACAAATGCAAGATAAAGTTGTTCGCACTTATGCAGAGATGGAGAATATAATGGCCAGGACAAGGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATTCAGGTATTATTTTTCATTTGGTGTATTTCTTATCCTTGGTATATATATATGTTTTTTTTTTTCATGTTTCAATGACATGGGACAATACATTAATAATGTTCACTTGCAAGATTCTCTCCTGATATTATTTTTGTGTGATTTAGAATTTTGCAAAGGGTTTACTGGACGTTGCAGACAATCTAGGACGAGCTTCATCTGTTGTCAAGGAAAGTTTTTCAAAGATTGATTCAACTAATGACACTGCTGGGGCAGTGCCCCTATTGAAAACCCTTCTTGAAGGTGTTGAAATGACTGAGAAGCAGCTGTCTGAGGTAAAGTTCTCATGTATAAAATGTTATTGAGGTTTGCAGTTAGAACTTTGATATCAGCAAAACTTGTATGGCAAAAGACTTAGTCAGTTGAAACCGTCTTAACTAACATATCATGGTATATCGGCCATTGGCCGTTTCCTTCTAATTTTGGCTCTTCATGACATCCTTGTGCTAATTATGTTTAACTAAATTATGTTACTTACAGGTGTTGAAAAAGTTTGGAGTGGAAATATTTGACCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGCCTCCCGGTACTGTTGCTGCTGTATTGAAGGTATGTCTCGTAGTCATGATCATTGTTTTGTGTGTGGTTCTGTTTCTACCATTATTATATTTCAAATTCTTCATATTTATTAGAGTTGCAAATGGAGATTTTATGATGATGAAACTGTAGGCGTAGGCATTAGGCAAGACAAAAGTTTTATTAACAAAGGTAATAAGAAAAGAAAATGGGAACTTCGCAAACATTTTCTTTGACAAATTAATTATTCTGAAGTGCCATTTACAGGCTTAAAGTAAGACGAACAAGCTATGAACATCATTGGCATTGAAGACTAACACTTCAAATCTTAAATGAAATAAATTTTTGAGAAAAGGGAATTGAAGATCTTGATCTTGAGATGCATAAAAGTTGGGAAGCATAGGGGCCTGATACTATGTTCTTGAAATGTCTGGGTCTGGGAAAAATTCTCTAGATACCAGGTTTGAGCCTCTAAATGGAGAACTCATTAAATAAAAAGCTTCTTTGAGCCAGTGCTATTAGGAAAGAATTGGGAATGCTATCAATAGGAAAGAATTGGGAATGCTATTGGGATATCAAGGGTATGTTGGTAATTAGGTAAGGAGTTAGGAGAGTTTATCATAAACTGAGTGGACTTGGGTGGACGAAGATAGGGAATTATTTAGATAGTTTAGGGTTGAGTGAAAATGCCCAAGAGGAGGGTCCAAGTACCACGAAGTACTTGGTTATTTTGTTGTTCTTTTAATTTCAATGTCATTTGAGTTCCACCTGCGCTCTATCATTCTTCTAGAGTTATCTTCGAATTGGCTACGTTTTTTTTTTAACAAACACGATGACATAGTATGAAAACATGGTACTTGAATCTGTACCTTTTTGTCGAAATAGAGGTTGTAGTAGAACTTGCATCAAAAACTATAATAATTGCAAAAGCCTAACTGTGATTTTGTTGTTAATATCCACAGAAAGGATACATGCTTCATGAGCGAGTACTTCGACCTGCTGAAGTCGGTGTTACTAGAGCTGTGGAGAATGAGGACGGAGCATGAAGGGATCGGTTGGAAGGATGGATATCCAACTCAAATTGTTTCCCCTGAAAAGAGTTTTGGTATGCGGAATGTTCTTCGATAGAGAAGATATCTAATCTAGACTTCCTGTTAGATGCAGAGGAAGAGGAAAACAATTCATTGCTTTGATAAACATTTGATTTTGTTGTGTATTTAGAGAGAGAGAGAGAGAGAGTGATATGTGAGGGTATTTCTGTGCTTTCCTGGTATCAGTTCAAATTCAGAACATGTATTCTGAATACCATAAGCTTCATGTGTAAACATATTCTCGAGGCATTTTTCTTTTGGTTAGAAAGTTACCAAAGGGCTTCTTGACGAGGATGAACCAGAGAGATGTCCACATCTTAACAGCCAGGGGCAACCTATAAAGATATGTGTATGCTAGAGA

mRNA sequence

CGCCAATTTGACTCAGCCACCACAAAACCCTCGCTCCCGTGTCCGTCTCCTGTGATCTCCTCCTCAGCCACATTCTTCTCTTCATTTCCTTCCAGTTTTCTCTGCCTGAAAAGCCTTCAACTCCGATCTTCCTTTTCAGTTTTAATCACCTTCCTTGTTAGCTATGATCGTCACCAAGCTTTTCTCACGCGCCTCCCGCAGCATTTGCCGGAGCTCGCTTCTCTCCTCGGCCTCGCAATCCAATCAAACCGCACACTTCTCGCCAATTCTATCCAATCGCTTTCATTGTCTTGCTAACGAATCCATCAATAAGGTCTATTCTTTTTCTGCTCAGGAATCTGCGTTATATAATTCATTTTTCCTTCATAAATTCGGATTATCAACGTTTGCATCCCCTGAGACTCCTGATAAGGAAAATGGTGATTCTGTACGAAGTAATGGCAGCTCTTCTGCTGCTGCAGAGCCGACGGCTGAATCTAATGGTCAAACCAAAGAATCAGATTCTGAGAGTGATGACAATCTCACCATGGATGATCTGGTGAAAGTTGTGGCTGAGAAGGAAGAGCTTTTGAAATTAAAGCATAAAGAGATTGAACAAATGCAAGATAAAGTTGTTCGCACTTATGCAGAGATGGAGAATATAATGGCCAGGACAAGGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATTCAGAATTTTGCAAAGGGTTTACTGGACGTTGCAGACAATCTAGGACGAGCTTCATCTGTTGTCAAGGAAAGTTTTTCAAAGATTGATTCAACTAATGACACTGCTGGGGCAGTGCCCCTATTGAAAACCCTTCTTGAAGGTGTTGAAATGACTGAGAAGCAGCTGTCTGAGGTGTTGAAAAAGTTTGGAGTGGAAATATTTGACCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGCCTCCCGGTACTGTTGCTGCTGTATTGAAGAAAGGATACATGCTTCATGAGCGAGTACTTCGACCTGCTGAAGTCGGTGTTACTAGAGCTGTGGAGAATGAGGACGGAGCATGAAGGGATCGGTTGGAAGGATGGATATCCAACTCAAATTGTTTCCCCTGAAAAGAGTTTTGGTATGCGGAATGTTCTTCGATAGAGAAGATATCTAATCTAGACTTCCTGTTAGATGCAGAGGAAGAGGAAAACAATTCATTGCTTTGATAAACATTTGATTTTGTTGTGTATTTAGAGAGAGAGAGAGAGAGAGTGATATGTGAGGGTATTTCTGTGCTTTCCTGGTATCAGTTCAAATTCAGAACATGTATTCTGAATACCATAAGCTTCATGTGTAAACATATTCTCGAGGCATTTTTCTTTTGGTTAGAAAGTTACCAAAGGGCTTCTTGACGAGGATGAACCAGAGAGATGTCCACATCTTAACAGCCAGGGGCAACCTATAAAGATATGTGTATGCTAGAGA

Coding sequence (CDS)

ATGATCGTCACCAAGCTTTTCTCACGCGCCTCCCGCAGCATTTGCCGGAGCTCGCTTCTCTCCTCGGCCTCGCAATCCAATCAAACCGCACACTTCTCGCCAATTCTATCCAATCGCTTTCATTGTCTTGCTAACGAATCCATCAATAAGGTCTATTCTTTTTCTGCTCAGGAATCTGCGTTATATAATTCATTTTTCCTTCATAAATTCGGATTATCAACGTTTGCATCCCCTGAGACTCCTGATAAGGAAAATGGTGATTCTGTACGAAGTAATGGCAGCTCTTCTGCTGCTGCAGAGCCGACGGCTGAATCTAATGGTCAAACCAAAGAATCAGATTCTGAGAGTGATGACAATCTCACCATGGATGATCTGGTGAAAGTTGTGGCTGAGAAGGAAGAGCTTTTGAAATTAAAGCATAAAGAGATTGAACAAATGCAAGATAAAGTTGTTCGCACTTATGCAGAGATGGAGAATATAATGGCCAGGACAAGGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATTCAGAATTTTGCAAAGGGTTTACTGGACGTTGCAGACAATCTAGGACGAGCTTCATCTGTTGTCAAGGAAAGTTTTTCAAAGATTGATTCAACTAATGACACTGCTGGGGCAGTGCCCCTATTGAAAACCCTTCTTGAAGGTGTTGAAATGACTGAGAAGCAGCTGTCTGAGGTGTTGAAAAAGTTTGGAGTGGAAATATTTGACCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGCCTCCCGGTACTGTTGCTGCTGTATTGAAGAAAGGATACATGCTTCATGAGCGAGTACTTCGACCTGCTGAAGTCGGTGTTACTAGAGCTGTGGAGAATGAGGACGGAGCATGA

Protein sequence

MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESALYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNLTMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENEDGA

Homology

[Close]

BLAST of CmoCh06G008930 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-81
Identity = 180/331 (54.38%), Postives = 235/331 (71.00%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSAS--QSNQTAHFSPILSNRFHCLANESINKVYSFSAQE 60
           M+V ++ SR +R+    S LS+ +    NQT    P+ S+RFH LA++  +K+      +
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQT----PVFSSRFHSLAHDFSHKLV---PAQ 60

Query: 61  SALYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESN------------ 120
            ++ +SF L +F  S+  SPE+ +K+      +  S ++  +PTAE+N            
Sbjct: 61  MSMMDSFALQRFNFSSSTSPESDEKK----THTEASKTSEEKPTAEANQPGLDSESKDSV 120

Query: 121 ---------------GQTKESDSESDDN-LTMDDLVKVVAEKEELLKLKHKEIEQMQDKV 180
                            + ESDSESDD+ L+ DDLVK+VAEKEELL  K +EI+Q++DKV
Sbjct: 121 TDSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKV 180

Query: 181 VRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKESFSKIDSTNDT 240
           +RTYAEMEN+M RTRR+AEN+KK+A+QNFAK LLDVADNLGRASSVVKESFSK+D++ D+
Sbjct: 181 LRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDS 240

Query: 241 AGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQVPDGSKPPGT 300
           AGA PLLKTLLEGVEMTEKQL+EV KKFG+E +DP NEPFDP+RHNAVFQVPD SKP GT
Sbjct: 241 AGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGT 300

Query: 301 VAAVLKKGYMLHERVLRPAEVGVTRAVENED 302
           VA VLK GY L++RV+RPAEVGVT+  EN++
Sbjct: 301 VAHVLKSGYTLYDRVIRPAEVGVTQGGENQE 320

[Close]

BLAST of CmoCh06G008930 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.5e-71
Identity = 162/305 (53.11%), Postives = 213/305 (69.84%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYS--FSAQE 60
           M+V+++ SR SRS    S  SS     +     PI+++RFH L + + NK+ +   S + 
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQ--IPIVASRFHSLVHGTPNKLVAVPVSLRN 60

Query: 61  SALYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESD- 120
               +   L +FG  + +S E    E+   V   G        T+E+    K +D+E D 
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTGE-------TSENVEVGKATDAEIDF 120

Query: 121 DNLTMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQ 180
           D+L+ DDLVK+V+EKE+LLK++ K+I +M+DK +RTYAE +N+M RT R AE++KKFA+Q
Sbjct: 121 DDLSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQ 180

Query: 181 NFAKGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKK 240
           NFA  LLDVADNL RASSVVKESFSKID++ D AGA PLLK LLEGVEMTEKQL+EV +K
Sbjct: 181 NFATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRK 240

Query: 241 FGVEIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAV 300
            G+   DP NEPF+P+RHNAVFQVPD SKP GT+A VLK GY L++RV+RPAEVGVT AV
Sbjct: 241 AGLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAV 296

Query: 301 ENEDG 303
           EN++G
Sbjct: 301 ENQEG 296

[Close]

BLAST of CmoCh06G008930 vs. ExPASy Swiss-Prot
Match: B6JCI1 (Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=grpE PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-30
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 141 KEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKES 200
           KE  + +D+++RT AEMEN+  RT+RE  +++ + I  FA+ +L++ADNL RA   V   
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDAV--- 106

Query: 201 FSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQ 260
                     A A P L  L+EGVE+TE+ L   L+K GV+  D   E FDP+ H A+F+
Sbjct: 107 -----PAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 166

Query: 261 VPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRA 297
           VPD S PPGTV  V++ GYM+ +RVLRPA VGV++A
Sbjct: 167 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

[Close]

BLAST of CmoCh06G008930 vs. ExPASy Swiss-Prot
Match: A4YJR1 (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 73/155 (47.10%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 141 KEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKES 200
           KE  + +DK++RT AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAVPAE 101

Query: 201 FSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQ 260
                  N  AG    LK+L+EGVE+TE+ L   L+K GV+ FDPT + FDP+   A+++
Sbjct: 102 ----TRANADAG----LKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 261 VPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTR 296
           VPD S P GTV  V++ G+M+ ERVLRPA VGV++
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

[Close]

BLAST of CmoCh06G008930 vs. ExPASy Swiss-Prot
Match: Q3SW78 (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.2e-29
Identity = 81/205 (39.51%), Postives = 118/205 (57.56%), Query Frame = 0


Query: 91  SNGSSSAAAEPTAESNGQTKESDSESDDNLTMDDLVKVVAEKEELLKLKHKEIEQMQDKV 150
           S+G +  + EP AE      +     DD             +++ L   +K++ + +D+ 
Sbjct: 4   SDGKTDKSGEPAAEVEPVVSKPYVMPDD------------PEDDALDALNKQLAEAKDRT 63

Query: 151 VRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKESFSKIDSTNDT 210
           +RT AEMEN+  RT RE  +++ + I  FA+ +L++ADNL RA   V          +  
Sbjct: 64  LRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQRALDAV--------PADAR 123

Query: 211 AGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQVPDGSKPPGT 270
           A   P LK L+EGVE+TE+ L   L+K GV+ FDP  E FDP+ H A+++VPD S P GT
Sbjct: 124 AAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFDPNVHQAMYEVPDPSIPVGT 183

Query: 271 VAAVLKKGYMLHERVLRPAEVGVTR 296
           VA V++ GYM+ ERVLRPA VGV +
Sbjct: 184 VAQVIQAGYMIGERVLRPALVGVAK 188

[Close]

BLAST of CmoCh06G008930 vs. ExPASy TrEMBL
Match: A0A6J1GCA9 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.8e-158
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60
           MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA
Sbjct: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60

Query: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120
           LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL
Sbjct: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120

Query: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180
           TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA
Sbjct: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180

Query: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240
           KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV
Sbjct: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240

Query: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300
           EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE
Sbjct: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300

Query: 301 DGA 304
           DGA
Sbjct: 301 DGA 303

[Close]

BLAST of CmoCh06G008930 vs. ExPASy TrEMBL
Match: A0A6J1L2A6 (GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498456 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 6.4e-155
Identity = 297/303 (98.02%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60
           MIVTKLFSRASR ICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFS QESA
Sbjct: 1   MIVTKLFSRASRGICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSDQESA 60

Query: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120
            +NSFFLHKFGLSTFASPE PDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL
Sbjct: 61  FHNSFFLHKFGLSTFASPEIPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120

Query: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180
           TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA
Sbjct: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180

Query: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240
           KGLLDVADNLGRASSVVKESFSKIDSTND+AGAVPLLKTLLEGVEMTEKQLSEVLKKFGV
Sbjct: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240

Query: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300
           EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE
Sbjct: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300

Query: 301 DGA 304
           DGA
Sbjct: 301 DGA 303

[Close]

BLAST of CmoCh06G008930 vs. ExPASy TrEMBL
Match: A0A6J1GBK9 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.7e-153
Identity = 297/303 (98.02%), Postives = 297/303 (98.02%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60
           MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA
Sbjct: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60

Query: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120
           LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESN      DSESDDNL
Sbjct: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESN------DSESDDNL 120

Query: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180
           TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA
Sbjct: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180

Query: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240
           KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV
Sbjct: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240

Query: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300
           EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE
Sbjct: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 297

Query: 301 DGA 304
           DGA
Sbjct: 301 DGA 297

[Close]

BLAST of CmoCh06G008930 vs. ExPASy TrEMBL
Match: A0A6J1GBL5 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.3e-152
Identity = 296/303 (97.69%), Postives = 296/303 (97.69%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60
           MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINK       ESA
Sbjct: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINK-------ESA 60

Query: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120
           LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL
Sbjct: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120

Query: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180
           TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA
Sbjct: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180

Query: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240
           KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV
Sbjct: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240

Query: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300
           EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE
Sbjct: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 296

Query: 301 DGA 304
           DGA
Sbjct: 301 DGA 296

[Close]

BLAST of CmoCh06G008930 vs. ExPASy TrEMBL
Match: A0A6J1KZB1 (GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498456 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.2e-150
Identity = 291/303 (96.04%), Postives = 293/303 (96.70%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSAQESA 60
           MIVTKLFSRASR ICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFS QESA
Sbjct: 1   MIVTKLFSRASRGICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYSFSDQESA 60

Query: 61  LYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNL 120
            +NSFFLHKFGLSTFASPE PDKENGDSVRSNGSSSAAAEPTAESN      DSESDDNL
Sbjct: 61  FHNSFFLHKFGLSTFASPEIPDKENGDSVRSNGSSSAAAEPTAESN------DSESDDNL 120

Query: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180
           TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA
Sbjct: 121 TMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFA 180

Query: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240
           KGLLDVADNLGRASSVVKESFSKIDSTND+AGAVPLLKTLLEGVEMTEKQLSEVLKKFGV
Sbjct: 181 KGLLDVADNLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKFGV 240

Query: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 300
           EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE
Sbjct: 241 EIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 297

Query: 301 DGA 304
           DGA
Sbjct: 301 DGA 297

[Close]

BLAST of CmoCh06G008930 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-82
Identity = 180/331 (54.38%), Postives = 235/331 (71.00%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSAS--QSNQTAHFSPILSNRFHCLANESINKVYSFSAQE 60
           M+V ++ SR +R+    S LS+ +    NQT    P+ S+RFH LA++  +K+      +
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQT----PVFSSRFHSLAHDFSHKLV---PAQ 60

Query: 61  SALYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESN------------ 120
            ++ +SF L +F  S+  SPE+ +K+      +  S ++  +PTAE+N            
Sbjct: 61  MSMMDSFALQRFNFSSSTSPESDEKK----THTEASKTSEEKPTAEANQPGLDSESKDSV 120

Query: 121 ---------------GQTKESDSESDDN-LTMDDLVKVVAEKEELLKLKHKEIEQMQDKV 180
                            + ESDSESDD+ L+ DDLVK+VAEKEELL  K +EI+Q++DKV
Sbjct: 121 TDSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKV 180

Query: 181 VRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKESFSKIDSTNDT 240
           +RTYAEMEN+M RTRR+AEN+KK+A+QNFAK LLDVADNLGRASSVVKESFSK+D++ D+
Sbjct: 181 LRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDS 240

Query: 241 AGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQVPDGSKPPGT 300
           AGA PLLKTLLEGVEMTEKQL+EV KKFG+E +DP NEPFDP+RHNAVFQVPD SKP GT
Sbjct: 241 AGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGT 300

Query: 301 VAAVLKKGYMLHERVLRPAEVGVTRAVENED 302
           VA VLK GY L++RV+RPAEVGVT+  EN++
Sbjct: 301 VAHVLKSGYTLYDRVIRPAEVGVTQGGENQE 320

[Close]

BLAST of CmoCh06G008930 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-72
Identity = 162/305 (53.11%), Postives = 213/305 (69.84%), Query Frame = 0


Query: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKVYS--FSAQE 60
           M+V+++ SR SRS    S  SS     +     PI+++RFH L + + NK+ +   S + 
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQ--IPIVASRFHSLVHGTPNKLVAVPVSLRN 60

Query: 61  SALYNSFFLHKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESD- 120
               +   L +FG  + +S E    E+   V   G        T+E+    K +D+E D 
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTGE-------TSENVEVGKATDAEIDF 120

Query: 121 DNLTMDDLVKVVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQ 180
           D+L+ DDLVK+V+EKE+LLK++ K+I +M+DK +RTYAE +N+M RT R AE++KKFA+Q
Sbjct: 121 DDLSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQ 180

Query: 181 NFAKGLLDVADNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKK 240
           NFA  LLDVADNL RASSVVKESFSKID++ D AGA PLLK LLEGVEMTEKQL+EV +K
Sbjct: 181 NFATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRK 240

Query: 241 FGVEIFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAV 300
            G+   DP NEPF+P+RHNAVFQVPD SKP GT+A VLK GY L++RV+RPAEVGVT AV
Sbjct: 241 AGLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAV 296

Query: 301 ENEDG 303
           EN++G
Sbjct: 301 ENQEG 296

[Close]

BLAST of CmoCh06G008930 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-06
Identity = 56/218 (25.69%), Postives = 92/218 (42.20%), Query Frame = 0


Query: 82  DKENGDSVRSNGSSSAAAEPTAESNGQTKE-SDSESDDNLTMDDLVKVVAEKEELLKLK- 141
           + EN  +         AA  TA      +  +D+       ++  +K + +++ LL  K 
Sbjct: 91  ENENASAEEGEAEEEEAAVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKV 150

Query: 142 ---HKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSV 201
                E+   +D+++R  A+ +N   RT RE  N    A     + LL V DN  RA S 
Sbjct: 151 ASLSNELSVERDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQ 210

Query: 202 VKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHN 261
           +K          +T G     + +    +   KQ  E+L   GV   +   + FDP  H 
Sbjct: 211 IKV---------ETEGE----EKVTNSYQSIYKQFVEILGSLGVIHVETVGKQFDPMLHE 270

Query: 262 AVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVT 295
           A+ +        G V    +KG++L ER+LRP+ V V+
Sbjct: 271 AIMREDSAEYEEGIVLEEYRKGFLLGERLLRPSMVKVS 295

[Close]

BLAST of CmoCh06G008930 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-06
Identity = 56/218 (25.69%), Postives = 92/218 (42.20%), Query Frame = 0


Query: 82  DKENGDSVRSNGSSSAAAEPTAESNGQTKE-SDSESDDNLTMDDLVKVVAEKEELLKLK- 141
           + EN  +         AA  TA      +  +D+       ++  +K + +++ LL  K 
Sbjct: 93  ENENASAEEGEAEEEEAAVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKV 152

Query: 142 ---HKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSV 201
                E+   +D+++R  A+ +N   RT RE  N    A     + LL V DN  RA S 
Sbjct: 153 ASLSNELSVERDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQ 212

Query: 202 VKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHN 261
           +K          +T G     + +    +   KQ  E+L   GV   +   + FDP  H 
Sbjct: 213 IKV---------ETEGE----EKVTNSYQSIYKQFVEILGSLGVIHVETVGKQFDPMLHE 272

Query: 262 AVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVT 295
           A+ +        G V    +KG++L ER+LRP+ V V+
Sbjct: 273 AIMREDSAEYEEGIVLEEYRKGFLLGERLLRPSMVKVS 297

[Close]

BLAST of CmoCh06G008930 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.6e-04
Identity = 65/273 (23.81%), Postives = 117/273 (42.86%), Query Frame = 0


Query: 47  SINKVYSFSAQESA-----LYNSFFLHKFGLSTFASP--ETPDK--------ENGDSVRS 106
           SI+  +SFS+  S+     L N+  LH  G  +  SP    P +        +  +S  +
Sbjct: 10  SISPCFSFSSPSSSSKTLPLRNN--LHFHGRPSPISPLISKPSRKFPIFSAHQTNNSEEA 69

Query: 107 NGSSSAAAEPTAESNGQTKESDSESDDNLTMDDLVKVVAEK----EELLKLKHKEIEQMQ 166
           N    A  +    S  Q   +  E+          K+  EK    +++L L  K I   +
Sbjct: 70  NSKQQADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLSMK-IASEK 129

Query: 167 DKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKESFSKIDST 226
           +  +R  A+ +N   +  ++  +++  A     K LL + D+  +A   V     ++D+ 
Sbjct: 130 EMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQV-----RVDTD 189

Query: 227 NDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNEPFDPHRHNAVFQVPDGSKP 286
            +       + T  +G+    +Q  EVL+   V +     +PFDP  H A+ +    +  
Sbjct: 190 KEKK-----IDTSYQGI---YRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVK 249

Query: 287 PGTVAAVLKKGYMLHERVLRPAEVGVTRAVENE 301
            G +   L KG++L +RVLRPA+V V+    N+
Sbjct: 250 AGIITEELNKGFVLGDRVLRPAKVKVSLGPVNK 266

The following BLAST results are available for this feature:

BLAST of CmoCh06G008930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB47	1.5e-81	54.38	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
Q9FLP3	5.5e-71	53.11	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
B6JCI1	3.6e-30	46.15	Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC...	[more]
A4YJR1	1.8e-29	47.10	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]
Q3SW78	5.2e-29	39.51	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]

BLAST of CmoCh06G008930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCA9	2.8e-158	100.00	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1	[more]
A0A6J1L2A6	6.4e-155	98.02	GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498456 PE=3 SV=1	[more]
A0A6J1GBK9	2.7e-153	98.02	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1	[more]
A0A6J1GBL5	2.3e-152	97.69	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1	[more]
A0A6J1KZB1	6.2e-150	96.04	GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498456 PE=3 SV=1	[more]

BLAST of CmoCh06G008930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26780.1	1.1e-82	54.38	Co-chaperone GrpE family protein	[more]
AT5G55200.1	3.9e-72	53.11	Co-chaperone GrpE family protein	[more]
AT5G17710.1	1.7e-06	25.69	Co-chaperone GrpE family protein	[more]
AT5G17710.2	1.7e-06	25.69	Co-chaperone GrpE family protein	[more]
AT1G36390.1	4.6e-04	23.81	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 129..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	PANTHER	PTHR21237:SF35	GRPE PROTEIN HOMOLOG	coord: 1..297
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 151..167 score: 38.42 coord: 274..293 score: 53.12 coord: 247..262 score: 47.07
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 129..294 e-value: 2.5E-49 score: 167.1
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 1..297
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 250..293
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 81..295 score: 18.870483
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 144..293 e-value: 2.13233E-61 score: 189.639
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 239..295 e-value: 4.5E-22 score: 79.8
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 240..295
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 103..238 e-value: 3.1E-28 score: 99.7
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 130..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008930.1	CmoCh06G008930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding