CmoCh06G008880 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G008880
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPHD finger protein MALE STERILITY 1
LocationCmo_Chr06: 5197330 .. 5199714 (-)
RNA-Seq ExpressionCmoCh06G008880
SyntenyCmoCh06G008880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACCTCATCCCCGGGAAGAGGAGGAGACCCGCCGCCGCCACCACTAGCAGCAGCAGCACCACCACCACCACCAGCCGCGGAGACAGGGTGTTCCGCTTCAAGAGCTTCGGGAAGAATGGCCATCCTACCCACTTTCTCGGCCGCTTCTGGGAGAACGTGGAGGCTCTCCTAGGGTTCGGCCACTGGGAAACTGGAGAGTCTTCCAACCGCTTCCGGTGTTGGTCCTTTCGCCTGCAGGTTCAGCGCCACCCCCCCTTCCATGTCGTGCTGTTTGTGGTGGAGGAGCCGGCTGAGGCGGCTACCGCGGCTGCCAGGCACTGCAAACAATGCCAGTATGTTGGTAAGTTTTTTTTTTTTTTTAATTTCATTTTGATCGAACATTTTAAAAAATATATTTAAGTATTTATTTCTTTGAAATTTTTTTAATATTAATTAAATATAATATAATTTAATTCTCTTATTAAATTATTTTTTAAAAAGTTTATTAATAAAATATAAGTACTACATCAATAATATTCATTTCTGATGAGTTATTGATTGAGGTGTGTAATAGTTTTCTAATTTGGGGCAATTCACTTTCAGGGTGGGGACATCATATGATATCCAATAAAAGATATCACTTTGTGTTGCCATCAAAGGAGACAATGATGGCTGCTTCTTCAAACAGCAAAAGCATGTTGAGTTCGAGGCTGATGGAATTACAAGGCCATATTCTTCATGGGGTTTTCCACTCCAATGGCTTCGGCCATTTGCTGTGTCTTAATGGCCTTGAAATGGGCAATTCTTTACCCGGCTACATTGTGATGGACTTTTGGGATCGCTTGTGCAATGCACTTAAAGCAAGGTTAGGCCTATTTTAATAAAACTTGCTTACTTTTACAAGAATTTGATACGTATTTCACATAATCATATCTTAAATGTTCATTTACTTTGATGAGAAACGCAACATAGAAAGGTGAGTTTGAGGGATATTGCACAAAACAAGGGAATGGAACTGAGGCTACTCCACAGCATTGCTTATGGCCAGCCATGGTTCGCCCAATGGGGCTACAAATTCAGCCGTGGTGCCTTCAAAGTCACCATTCAAATGAACCAAAGAGCCATTGAAGCCCTTCAAGCCCTCCCTCTTTCTCTCCTTCTCCACCATCTTGTCAGTGCTCATCCACACATTCCTTTCATTTTCTCTAAGTACCAATCCCTCTCCATCCACCCTCTTCACACCCTCCAAGACCTCCTCCAATTCATGCTCAATCTTAAATCCCCTCTCCCCGCACAAAATTCCTTACAACAACACTCCCATACCTTGCCTGCATTCTTGCTCGAAAACTCATCTCGATGGTCCCCAAAGCGTGTTGAGATGGCGGTTCGAGTCATTGTCGAGGCATTGAAACGAGCCGAATTTCGATGGGTATCACGACAGGAGGTACGGGATGCCGCTCGTATTTATATCGGCGATACGGGGTTGTTGGATTTCGTGTTGAAATCATTGGGAAATCATGTTGTTGGAAATTATTTGGTACGAAGAACACTGAATCCGGTGACCAAAGTGCTTGAGTATTGCTTGCAAGATGTTTGTAGTAGCGTTCAAATGAAACCTAGGTTTGTTAATTTACCATTAACTTCAAAAGCTTTATATGTAATAGAAAATTAATTTATTATAATTATTATTATTTTTCATTTACGTTTTGAACAAGGTGTATAGTTGGGAGAGCGGAGTTGGCTAAGGATATATCCAACGTCTACAAATACATTCTTGGAGACCAAAAGGCATTGCAAGCTAAAGGAATCCTTCCCACTCTAACAATGGCTTCCGAGATCATCCTCGACTCGAAGTTCCTGGTCAAGGAGTATATGACCGAGCCACAGGTGAAAACCAAGCTCGAAACCGAAGGCAAACAACACATATTGTGCACAATTAGAGTGAAAAGACAAGAAGCAACAACAACACTTCCATATGAATGCATTGGATTGAAGAACAATGGCACCATTGATGAGCTAAAGAGGGAGGTGGAAAGGAACTTCAAGGAAATGTATTGGGGATTGAGTAGGTTTGTAGTGGAAAGGATAGTGGATTTGGAGGCAAAAGGGAGGGATTTAGTGTTTGAGTTGATGGAAGTTGGTGGGAAGTTGGTGTTTGAAGGAAGTGGAGAAGATGAAGGGAGGGTTTTGATAAACAATAATGATGGAATTGAGAAGAGAATTATGGAGTGTGTTTGTGGAGCAGTGGAAGATGATGGGGAGAGGATGGTAGCTTGTGATATATGTGAAATTTGGCAGCATACAAGGTGTGTTCAAATACCAAATGAACAACAAGTTCCTCAAATTTTTATTTGTAATAGGTGTGATCAAGAAATTGCATTGCTACACTCCTTGCCTTAG

mRNA sequence

ATGGCGGACCTCATCCCCGGGAAGAGGAGGAGACCCGCCGCCGCCACCACTAGCAGCAGCAGCACCACCACCACCACCAGCCGCGGAGACAGGGTGTTCCGCTTCAAGAGCTTCGGGAAGAATGGCCATCCTACCCACTTTCTCGGCCGCTTCTGGGAGAACGTGGAGGCTCTCCTAGGGTTCGGCCACTGGGAAACTGGAGAGTCTTCCAACCGCTTCCGGTGTTGGTCCTTTCGCCTGCAGGTTCAGCGCCACCCCCCCTTCCATGTCGTGCTGTTTGTGGTGGAGGAGCCGGCTGAGGCGGCTACCGCGGCTGCCAGGCACTGCAAACAATGCCAGTATGTTGGGTGGGGACATCATATGATATCCAATAAAAGATATCACTTTGTGTTGCCATCAAAGGAGACAATGATGGCTGCTTCTTCAAACAGCAAAAGCATGTTGAGTTCGAGGCTGATGGAATTACAAGGCCATATTCTTCATGGGGTTTTCCACTCCAATGGCTTCGGCCATTTGCTGTGTCTTAATGGCCTTGAAATGGGCAATTCTTTACCCGGCTACATTGTGATGGACTTTTGGGATCGCTTGTGCAATGCACTTAAAGCAAGAAAGGTGAGTTTGAGGGATATTGCACAAAACAAGGGAATGGAACTGAGGCTACTCCACAGCATTGCTTATGGCCAGCCATGGTTCGCCCAATGGGGCTACAAATTCAGCCGTGGTGCCTTCAAAGTCACCATTCAAATGAACCAAAGAGCCATTGAAGCCCTTCAAGCCCTCCCTCTTTCTCTCCTTCTCCACCATCTTGTCAGTGCTCATCCACACATTCCTTTCATTTTCTCTAAGTACCAATCCCTCTCCATCCACCCTCTTCACACCCTCCAAGACCTCCTCCAATTCATGCTCAATCTTAAATCCCCTCTCCCCGCACAAAATTCCTTACAACAACACTCCCATACCTTGCCTGCATTCTTGCTCGAAAACTCATCTCGATGGTCCCCAAAGCGTGTTGAGATGGCGGTTCGAGTCATTGTCGAGGCATTGAAACGAGCCGAATTTCGATGGGTATCACGACAGGAGGTACGGGATGCCGCTCGTATTTATATCGGCGATACGGGGTTGTTGGATTTCGTGTTGAAATCATTGGGAAATCATGTTGTTGGAAATTATTTGGTACGAAGAACACTGAATCCGGTGACCAAAGTGCTTGAGTATTGCTTGCAAGATGTTTGTAGTAGCGTTCAAATGAAACCTAGGTGTATAGTTGGGAGAGCGGAGTTGGCTAAGGATATATCCAACGTCTACAAATACATTCTTGGAGACCAAAAGGCATTGCAAGCTAAAGGAATCCTTCCCACTCTAACAATGGCTTCCGAGATCATCCTCGACTCGAAGTTCCTGGTCAAGGAGTATATGACCGAGCCACAGGTGAAAACCAAGCTCGAAACCGAAGGCAAACAACACATATTGTGCACAATTAGAGTGAAAAGACAAGAAGCAACAACAACACTTCCATATGAATGCATTGGATTGAAGAACAATGGCACCATTGATGAGCTAAAGAGGGAGGTGGAAAGGAACTTCAAGGAAATGTATTGGGGATTGAGTAGGTTTGTAGTGGAAAGGATAGTGGATTTGGAGGCAAAAGGGAGGGATTTAGTGTTTGAGTTGATGGAAGTTGGTGGGAAGTTGGTGTTTGAAGGAAGTGGAGAAGATGAAGGGAGGGTTTTGATAAACAATAATGATGGAATTGAGAAGAGAATTATGGAGTGTGTTTGTGGAGCAGTGGAAGATGATGGGGAGAGGATGGTAGCTTGTGATATATGTGAAATTTGGCAGCATACAAGGTGTGTTCAAATACCAAATGAACAACAAGTTCCTCAAATTTTTATTTGTAATAGGTGTGATCAAGAAATTGCATTGCTACACTCCTTGCCTTAG

Coding sequence (CDS)

ATGGCGGACCTCATCCCCGGGAAGAGGAGGAGACCCGCCGCCGCCACCACTAGCAGCAGCAGCACCACCACCACCACCAGCCGCGGAGACAGGGTGTTCCGCTTCAAGAGCTTCGGGAAGAATGGCCATCCTACCCACTTTCTCGGCCGCTTCTGGGAGAACGTGGAGGCTCTCCTAGGGTTCGGCCACTGGGAAACTGGAGAGTCTTCCAACCGCTTCCGGTGTTGGTCCTTTCGCCTGCAGGTTCAGCGCCACCCCCCCTTCCATGTCGTGCTGTTTGTGGTGGAGGAGCCGGCTGAGGCGGCTACCGCGGCTGCCAGGCACTGCAAACAATGCCAGTATGTTGGGTGGGGACATCATATGATATCCAATAAAAGATATCACTTTGTGTTGCCATCAAAGGAGACAATGATGGCTGCTTCTTCAAACAGCAAAAGCATGTTGAGTTCGAGGCTGATGGAATTACAAGGCCATATTCTTCATGGGGTTTTCCACTCCAATGGCTTCGGCCATTTGCTGTGTCTTAATGGCCTTGAAATGGGCAATTCTTTACCCGGCTACATTGTGATGGACTTTTGGGATCGCTTGTGCAATGCACTTAAAGCAAGAAAGGTGAGTTTGAGGGATATTGCACAAAACAAGGGAATGGAACTGAGGCTACTCCACAGCATTGCTTATGGCCAGCCATGGTTCGCCCAATGGGGCTACAAATTCAGCCGTGGTGCCTTCAAAGTCACCATTCAAATGAACCAAAGAGCCATTGAAGCCCTTCAAGCCCTCCCTCTTTCTCTCCTTCTCCACCATCTTGTCAGTGCTCATCCACACATTCCTTTCATTTTCTCTAAGTACCAATCCCTCTCCATCCACCCTCTTCACACCCTCCAAGACCTCCTCCAATTCATGCTCAATCTTAAATCCCCTCTCCCCGCACAAAATTCCTTACAACAACACTCCCATACCTTGCCTGCATTCTTGCTCGAAAACTCATCTCGATGGTCCCCAAAGCGTGTTGAGATGGCGGTTCGAGTCATTGTCGAGGCATTGAAACGAGCCGAATTTCGATGGGTATCACGACAGGAGGTACGGGATGCCGCTCGTATTTATATCGGCGATACGGGGTTGTTGGATTTCGTGTTGAAATCATTGGGAAATCATGTTGTTGGAAATTATTTGGTACGAAGAACACTGAATCCGGTGACCAAAGTGCTTGAGTATTGCTTGCAAGATGTTTGTAGTAGCGTTCAAATGAAACCTAGGTGTATAGTTGGGAGAGCGGAGTTGGCTAAGGATATATCCAACGTCTACAAATACATTCTTGGAGACCAAAAGGCATTGCAAGCTAAAGGAATCCTTCCCACTCTAACAATGGCTTCCGAGATCATCCTCGACTCGAAGTTCCTGGTCAAGGAGTATATGACCGAGCCACAGGTGAAAACCAAGCTCGAAACCGAAGGCAAACAACACATATTGTGCACAATTAGAGTGAAAAGACAAGAAGCAACAACAACACTTCCATATGAATGCATTGGATTGAAGAACAATGGCACCATTGATGAGCTAAAGAGGGAGGTGGAAAGGAACTTCAAGGAAATGTATTGGGGATTGAGTAGGTTTGTAGTGGAAAGGATAGTGGATTTGGAGGCAAAAGGGAGGGATTTAGTGTTTGAGTTGATGGAAGTTGGTGGGAAGTTGGTGTTTGAAGGAAGTGGAGAAGATGAAGGGAGGGTTTTGATAAACAATAATGATGGAATTGAGAAGAGAATTATGGAGTGTGTTTGTGGAGCAGTGGAAGATGATGGGGAGAGGATGGTAGCTTGTGATATATGTGAAATTTGGCAGCATACAAGGTGTGTTCAAATACCAAATGAACAACAAGTTCCTCAAATTTTTATTTGTAATAGGTGTGATCAAGAAATTGCATTGCTACACTCCTTGCCTTAG

Protein sequence

MADLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLGFGHWETGESSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQEVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRCIVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTKLETEGKQHILCTIRVKRQEATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDDGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP
Homology
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BLAST of CmoCh06G008880 vs. ExPASy Swiss-Prot
Match: Q9FMS5 (PHD finger protein MALE STERILITY 1 OS=Arabidopsis thaliana OX=3702 GN=MS1 PE=1 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.9e-159
Identity = 315/663 (47.51%), Postives = 420/663 (63.35%), Query Frame = 0 

Query: 28  RGD-RVFRFKSFGKNGHPTHFLG-RFWENVEALLGFGHWETGESSNRFRCWSFRLQVQRH 87
           RG+ RVFR K+FG++GHP       F +N+  LL FGH+   ESS     WSF+L++QR+
Sbjct: 19  RGESRVFRLKTFGESGHPAEMNELSFRDNLAKLLEFGHF---ESSGLMGSWSFQLEIQRN 78

Query: 88  P-PFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMA----- 147
           P P +V+LFVVEEP EA+      C  CQYVGWG+ MI NK+YHFV+PSKETM A     
Sbjct: 79  PNPLYVLLFVVEEPIEASLNL--RCNHCQYVGWGNQMICNKKYHFVIPSKETMAAFLKLE 138

Query: 148 ----ASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGNSLPGYIVMDFWDR 207
               A    +S   S L+ELQGH+LHG FHSNGFGHLL LNG+E G+ L G+ VMD WDR
Sbjct: 139 GGGYAFPEKESF--SHLVELQGHVLHGFFHSNGFGHLLSLNGIETGSDLTGHQVMDLWDR 198

Query: 208 LCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQMNQRAIE 267
           LC  LKARK+ L D +  KGMELRLLH +A G+PWF +WGY+F  G + VT ++ ++A+E
Sbjct: 199 LCTGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQKIYEKALE 258

Query: 268 ALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLPAQNSLQ 327
           +++ +PL LL HHL S +   P + SKYQSLS  PL TL DL +FML+L S LP  N + 
Sbjct: 259 SVRNIPLCLLNHHLTSLNRETPILLSKYQSLSTEPLITLSDLFRFMLHLHSRLPRDNYMS 318

Query: 328 QHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQEVRDAARIYIGDTGLL 387
              + + + +   + RWS KR++MA++V++E+LKR E+RW+SRQEVRDAAR YIGDTGLL
Sbjct: 319 NSRNQIIS-IDSTNCRWSQKRIQMAIKVVIESLKRVEYRWISRQEVRDAARNYIGDTGLL 378

Query: 388 DFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRCI-------------- 447
           DFVLKSLGN VVGNYLVRR+LNPV KVLEY L+D+ + +      +              
Sbjct: 379 DFVLKSLGNQVVGNYLVRRSLNPVKKVLEYSLEDISNLLPSSNNELITLQNQNSMGKMAT 438

Query: 448 -----VGRAELAKDISNVYKYILGDQKALQAK--GILPTLTMASEIILDSKFLVKE--YM 507
                + R ++ KD+   YK+IL D K +     GIL  + MAS  ILD+K+ +KE  Y+
Sbjct: 439 NGHNKITRGQVMKDMFYFYKHILMDYKGVLGPIGGILNQIGMASRAILDAKYFIKEYHYI 498

Query: 508 TEPQVKTKLETEGKQ-HILCTIRVKRQEATTTL---PYECIGLKNNGTIDELKREVERNF 567
            +   KT     G++  I CTI  K       +   P ECI +K + T+ E+  E ER F
Sbjct: 499 RDTSAKTLHLDRGEELGIFCTIAWKCHHHNNEIKVPPQECIVVKKDATLSEVYGEAERVF 558

Query: 568 KEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGGK-LVFEGS----GEDEGRVLINNNDG 627
           +++YW L   VVE +V  + +    V E+   G K LV EG+       E      ++D 
Sbjct: 559 RDIYWELRDVVVESVVGGQIE-ITRVDEMALNGNKGLVLEGNVGMMMNIEVTKCYEDDDK 618

Query: 628 IEKRIMECVCGAVEDDGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLH 647
            + + +EC CGA E+DGERMV CDICE+WQHTRCV + + ++VP+IF+C  CDQ +  L 
Sbjct: 619 KKDKRIECECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHLIPLS 672

[Close]
BLAST of CmoCh06G008880 vs. ExPASy Swiss-Prot
Match: Q67V61 (PHD finger protein PERSISTENT TAPETAL CELL 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PTC1 PE=2 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.1e-145
Identity = 282/670 (42.09%), Postives = 402/670 (60.00%), Query Frame = 0 

Query: 19  SSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGR--FWENVEALLGFGHWETGESSNRFRCW 78
           S  ++    RG+ +FRF++F + G+P +F G   F +NV  LLGF H E G      +CW
Sbjct: 8   SLGSSRRRKRGEMLFRFEAFCQPGYPANFAGAGGFRDNVRTLLGFAHLEAGVHGET-KCW 67

Query: 79  SFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKET 138
           SF+L++ RHPP  V LFVVEE  E A +  R C  C+++GWG H+I +KRYHF+LP +E+
Sbjct: 68  SFQLELHRHPPTVVRLFVVEE--EVAASPHRQCHLCRHIGWGRHLICSKRYHFLLPRRES 127

Query: 139 MMAA--------------SSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGN 198
              A              +  + S  ++     +GH+LHGV H NG+GHL+ L+GLE G+
Sbjct: 128 AAEADGLCFAINHGGGGGAEKASSKGTTTTASSRGHLLHGVVHLNGYGHLVALHGLEGGS 187

Query: 199 S-LPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRG 258
             + G+ +MD WDR+C+AL  R VSL D A+   MELRLLH +AYG+ WF +WGY++ R 
Sbjct: 188 DFVSGHQIMDLWDRICSALHVRTVSLVDTARKGHMELRLLHGVAYGETWFGRWGYRYGRP 247

Query: 259 AFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFM 318
           ++ V +   ++++  L ++PL +L+ HL      +P + +KYQ++S H L +L DLL+FM
Sbjct: 248 SYGVALPSYRQSLHVLGSMPLCVLVPHLSCFSQELPMVVTKYQAISGHKLLSLGDLLRFM 307

Query: 319 LNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAE--FRWVSRQ 378
           L L++ LPA +            + E S RWS KRV+MA R +V+AL+RAE   RWV+RQ
Sbjct: 308 LELRARLPATSVTAMDYR---GIMSEASCRWSAKRVDMAARAVVDALRRAEPAARWVTRQ 367

Query: 379 EVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSV----- 438
           EVRDAAR YIGDTGLLDFVLKSLGNH+VGNY+VRRT+NPVTKVLEYCL+DV S +     
Sbjct: 368 EVRDAARAYIGDTGLLDFVLKSLGNHIVGNYVVRRTMNPVTKVLEYCLEDVSSVLPAVAA 427

Query: 439 --------QMKPRCIVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKF 498
                   +M+ R  + RA+L +D+ ++Y+++L +       G    + +A  ++LD K 
Sbjct: 428 GGGVPAQGKMRVRFQLTRAQLMRDLVHLYRHVLKEPSQALTGGAFGAIPVAVRMVLDIKH 487

Query: 499 LVKEYMTEPQVKTKLETEGKQH----ILCTIRVKRQEATTTLPYECIGLKNNGTIDELKR 558
            VK+Y       +     G  H    + CT+ V         PYE + L  + T+ ELK 
Sbjct: 488 FVKDYHEGQAAASSNGGGGFGHPHINLCCTLLVSNGSPELAPPYETVTLPAHATVGELKW 547

Query: 559 EVERNFKEMYWGLSRFVVERIVDLEAKGRDL-VFELMEVGGKLVFEGS------GEDEGR 618
           E +R F EMY GL  F  + +V + A    L V  L++VG  +V +GS      GED  R
Sbjct: 548 EAQRVFSEMYLGLRSFAADSVVGVGADQEGLPVLGLVDVGSAVVVQGSVGEQINGEDHER 607

Query: 619 ------VLINNNDGIEKRIMECVCGAVEDDGERMVACDICEIWQHTRCVQIPNEQQVPQI 640
                   +    G  +R+++C CGAV+DDGERM  CDICE WQHTRC  I + +  P +
Sbjct: 608 KEEAAAAAVCEGSGGGERVVDCACGAVDDDGERMACCDICEAWQHTRCAGIADTEDAPHV 667

[Close]
BLAST of CmoCh06G008880 vs. ExPASy Swiss-Prot
Match: Q7X6Y7 (PHD finger protein MALE MEIOCYTE DEATH 1 OS=Arabidopsis thaliana OX=3702 GN=MMD1 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-90
Identity = 220/676 (32.54%), Postives = 344/676 (50.89%), Query Frame = 0 

Query: 22  TTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLGFGHWETGESSNRFRCWSFRLQ 81
           T     R  +V+  + FG++G P    G F + +   L                W   L 
Sbjct: 8   TCRKRKRKPKVYNLQRFGEDGFPIQRNGAFRDQIRVFLRDCAEIEDYDIRGMTVWCTLLS 67

Query: 82  VQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMAAS 141
            +      + L++VEE  + ++    +C  C+  GW +H +S ++YHF++P         
Sbjct: 68  HETKSSL-IPLYIVEENVKHSSEP--YCDHCRCTGWSNHFVSKRKYHFIIP-------ID 127

Query: 142 SNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGNS-LPGYIVMDFWDRLCNAL 201
           +     L     + Q H+LHG+ H NGFGHL+C+NG+E G+  L G  ++DFWDRLCN+L
Sbjct: 128 TEWSLPLEDDAFDSQSHVLHGLIHCNGFGHLVCVNGMESGSKYLCGREIVDFWDRLCNSL 187

Query: 202 KARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQMNQRAIEALQAL 261
            AR +++ D+A+ + +ELRLL+ +AYG  WF +WGYKF  G+F VT    + AIEAL +L
Sbjct: 188 GARMITVEDLAKKRSVELRLLYGVAYGHSWFGRWGYKFCCGSFGVTKNEYENAIEALGSL 247

Query: 262 PLSLLLHHL--VSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLPAQNSL---- 321
            +  +      +     I  +F  Y+ +S   L T +DLL+FML +KS    Q  L    
Sbjct: 248 EIDQIEFDFGELRQSKEINQVFRYYREMSEGHLKTFRDLLRFMLIIKSHASPQKLLPVTP 307

Query: 322 -----QQHSHTLPAFLLENS----------------------SRWSPKRVEMAVRVIVEA 381
                  H       LL+ S                      SRW  +R+  A  VIVE+
Sbjct: 308 PLLTDSPHQKRSSRLLLKKSDVADNDKSPKYRNYSTVAANLGSRWPVRRLIFAAEVIVES 367

Query: 382 LKRAEF---RWVSRQEVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLE 441
           LK  +      ++RQ+VRD+AR++IGDTGLLD+VLKS+ N VVG+ LVRR ++P+T++L 
Sbjct: 368 LKEMKALKQNGMTRQDVRDSARLHIGDTGLLDYVLKSMNNVVVGDVLVRRYVDPITRILH 427

Query: 442 YCLQDVCSSVQMK-PRCIVGRAELAKDISNVY--------KYILGDQKALQAKGIL---- 501
           Y +QD+  +V+ K P+     A + ++I+ +           + GD   L    +L    
Sbjct: 428 YTIQDLDDAVKAKEPK--KKEAVVLEEITPLRILTPLKPGADVYGDLLLLYTNVLLNYPE 487

Query: 502 -PTLTMASEIILDSKFLVKEYMTEPQVKTKLETEGKQHILCTIR-----VKRQEATTTLP 561
              +  A++ ILDSK  +KE+       T L+       LC I      V+ ++ T   P
Sbjct: 488 SELVRSATQAILDSKHFIKEWPIWDNNDTVLQ------FLCRINPSLVDVRSEQTTELPP 547

Query: 562 YECIGLKNNGTIDELKREVERNFKEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGGKLV 621
            E + +    T+ +LK+ +E  F++ Y  LS FVV  I ++E         L+     L 
Sbjct: 548 GELVTVPLQATVYDLKQAIEETFRDTYCILSNFVVTEIDEVEED-----MSLIGSCSALT 607

Query: 622 FEGSGED-EGRVLINNNDGIEKRIMECVCGAVEDDGERMVACDICEIWQHTRCVQIPNEQ 641
             G G D E +  +    G +  +++C+C A +DDGERM++CD+CE+WQHTRC  I +  
Sbjct: 608 VRGHGIDLESK--LKCQGGCDTWMVKCICRARDDDGERMISCDVCEVWQHTRCCGIDDSD 658

[Close]
BLAST of CmoCh06G008880 vs. ExPASy Swiss-Prot
Match: Q9ZUA9 (PHD finger protein At2g01810 OS=Arabidopsis thaliana OX=3702 GN=At2g01810 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.8e-72
Identity = 188/602 (31.23%), Postives = 288/602 (47.84%), Query Frame = 0 

Query: 109 CKQCQYVGWGHHMISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNG 168
           C  C+  GWGHH ++ ++YH ++P+++            L    + L  H++HG+ H NG
Sbjct: 98  CDFCRCFGWGHHYVTKRKYHMIIPNRDEW-------NEPLKRESLTLSSHLMHGLIHCNG 157

Query: 169 FGHLLCLN-GLEMGNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYG 228
           FGHLLC+N  L+  N L G  +MDFWDRLC+ L  RK+SL D ++   M+LRLLH +AYG
Sbjct: 158 FGHLLCINTDLDDPNHLSGDQIMDFWDRLCSTLHTRKISLDDTSKKGAMDLRLLHGVAYG 217

Query: 229 QPWFAQWGYKFSRGAFKVTIQMNQRAIEALQALPLSLLLHHL--VSAHPHIPFIFSKYQS 288
           +PWF +W Y FS G+F V   +  RAI  L ++ +  +L  L   S    +  I   Y+ 
Sbjct: 218 RPWFGKWDYMFSHGSFGVKKDLYWRAILTLSSIEVDKILEELSGTSKGRVMKKIIDFYRG 277

Query: 289 LSIHPLHTLQDLLQFMLNL--KSPL--------------------------------PAQ 348
            +  PL TL DLL+FML    K+P+                                P Q
Sbjct: 278 STESPLATLSDLLRFMLGFISKAPIERKTAMALVAMSLDHVSYPTLRADENSEVCTSPDQ 337

Query: 349 NS------------LQQHSHTLPA-----------FLLENSSRWSPKRVEMAVRVIVEAL 408
            S            L  H+ T                    SRW  +R+  A + +++  
Sbjct: 338 ESDDNGYESGRDTVLDDHNTTTSGIKPPQYYSFDDLSRREHSRWPGRRLNDAAQAVLKVF 397

Query: 409 KRAEFRWVSRQEVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQ 468
           K      +SRQ++R+A R  IGDTGL+DF+LK +   ++G+ +V+R+ NP +++L++ L+
Sbjct: 398 KERN-STISRQDLREAVRSSIGDTGLIDFLLKHIDKVLIGDQIVQRSTNPKSRMLQFSLR 457

Query: 469 DVCSSVQ---------MKPR----CIVGRAELAKDISNVYKYILGDQKALQAKGILPTLT 528
            + S VQ         +KP+    C      L+     +Y Y    Q  L         +
Sbjct: 458 TINSRVQEQKRKKKRKVKPQETSECTSTTPGLSPYDDILYLY----QNLLLTYPDSDLYS 517

Query: 529 MASEIILDSKFLVKEYMTEPQVKTKLETEGKQHILCTIRVKRQEATTTL-PYECIGLKNN 588
            AS++IL  K  VKE+  + Q    +  +    +L       ++ T  L P + + +  N
Sbjct: 518 EASQVILKCKSFVKEWSYQEQNHLTVSCQ----VLPNHEELLRDFTRLLPPGDLVAVPEN 577

Query: 589 GTIDELKREVERNFKEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGG-KLVFEGSGEDE 636
            TI ELK   E+  ++ Y     F V  I +   +  D    L   G  + + +G G D 
Sbjct: 578 ATIRELKSAAEKVLRDTYCITETFEVLEIRNRYLEKLDDNVSLKSQGNTEFMVKGFGLDI 637

[Close]
BLAST of CmoCh06G008880 vs. ExPASy Swiss-Prot
Match: Q9C810 (PHD finger protein At1g33420 OS=Arabidopsis thaliana OX=3702 GN=At1g33420 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.4e-69
Identity = 175/577 (30.33%), Postives = 288/577 (49.91%), Query Frame = 0 

Query: 90  VVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMAA--------- 149
           V L VVEE    ++ +  +C+ C  VGW  H +  KRY F++ S     A          
Sbjct: 92  VSLDVVEEDVTRSSRSV-YCEHCCVVGWSSHPVCRKRYRFIIRSGGDTKACTRCGNTQNL 151

Query: 150 SSNSKSMLSSRLMELQG----------HILHGVFHSNGFGHLLCLNGLEMGNS-LPGYIV 209
           S  S     S  ++++           H+LHGV HSNG+ HLLCLNG E G+  L G  +
Sbjct: 152 SEGSNCKWCSMALDIENWVYSQLEDNTHLLHGVIHSNGYAHLLCLNGREGGSGFLTGRAI 211

Query: 210 MDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQM 269
           MDFWDRLC++L  RK S+ D+++  GM+ RLLH I  G  W+++WGY+F  G++ +T + 
Sbjct: 212 MDFWDRLCSSLAVRKASVMDVSRKYGMDYRLLHGITRGCSWYSEWGYEFKSGSYALTKEA 271

Query: 270 NQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLP 329
            Q A++ L A+PLS  L         +  I S YQSLS   L T++DL  F+L +     
Sbjct: 272 YQSAVDTLSAIPLSEFLFQGRKPRTQLHSIISFYQSLSCSELVTVKDLFSFLLQM----- 331

Query: 330 AQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALK---RAEFRWVSRQEVRDAAR 389
               ++++S + PA        WS   VE   + +V+ LK   R +  WV+R  ++ +  
Sbjct: 332 ----IRENS-SKPASKSSVLCAWSKSDVERVQQTMVKILKASGRPQANWVTRWALKRSI- 391

Query: 390 IYIGDTGLLDFVLKSLGNHVV--GNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRCIVGR 449
                  L+D+ LK  G  +V  G+ +V    NP +   EY L+ V +  ++  + +   
Sbjct: 392 CKSASPQLIDYCLKHFGGVLVDDGSRVVSSRCNPGSNDFEYRLESVNNVHRLSNQDVNNA 451

Query: 450 A--ELAKDISNVYKYILGDQ--KALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTK 509
           +   + +D+  +Y+ +L  Q     +++     +  A+  ILD K  +K+Y++       
Sbjct: 452 SVEHVKQDLRYLYETLLHPQTMAEFRSRATREKMIDAATKILDCKHFIKDYLSSTVNPVA 511

Query: 510 LETEGKQHILCTIRVKRQ-EATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFV 569
           +      ++ C + +  + + +   P E + L  N T+ +LK E  + F+E+Y    RF 
Sbjct: 512 I------NLWCCVELSDELKESPAPPPERLVLPLNATVSDLKIEAAKAFQEVYAMFKRFE 571

Query: 570 VERIVDLEAKGRDLVFE-LMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVED 629
           VE ++   +    +  + L+   G +  +G     G +      G++   ++C CG  +D
Sbjct: 572 VEELLGYGSIDDSITLKFLVGTNGVIRIKGRCSKHGLLRYRMERGVDNWKVDCKCGTKDD 631

Query: 630 DGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRC 636
           DGERM+ACD C +W HTRC+ I N   +P  F+C RC
Sbjct: 632 DGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRC 650

[Close]
BLAST of CmoCh06G008880 vs. ExPASy TrEMBL
Match: A0A6J1G3J7 (PHD finger protein MALE STERILITY 1 OS=Cucurbita moschata OX=3662 GN=LOC111450416 PE=4 SV=1)

HSP 1 Score: 1310.0 bits (3389), Expect = 0.0e+00
Identity = 646/646 (100.00%), Postives = 646/646 (100.00%), Query Frame = 0 

Query: 1   MADLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLG 60
           MADLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLG
Sbjct: 1   MADLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLG 60

Query: 61  FGHWETGESSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHH 120
           FGHWETGESSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHH
Sbjct: 61  FGHWETGESSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHH 120

Query: 121 MISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEM 180
           MISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEM
Sbjct: 121 MISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEM 180

Query: 181 GNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSR 240
           GNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSR
Sbjct: 181 GNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSR 240

Query: 241 GAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQF 300
           GAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQF
Sbjct: 241 GAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQF 300

Query: 301 MLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQE 360
           MLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQE
Sbjct: 301 MLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQE 360

Query: 361 VRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRC 420
           VRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRC
Sbjct: 361 VRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRC 420

Query: 421 IVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTK 480
           IVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTK
Sbjct: 421 IVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTK 480

Query: 481 LETEGKQHILCTIRVKRQEATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFVV 540
           LETEGKQHILCTIRVKRQEATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFVV
Sbjct: 481 LETEGKQHILCTIRVKRQEATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFVV 540

Query: 541 ERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDDG 600
           ERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDDG
Sbjct: 541 ERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDDG 600

Query: 601 ERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 647
           ERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP
Sbjct: 601 ERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 646

[Close]
BLAST of CmoCh06G008880 vs. ExPASy TrEMBL
Match: A0A6J1KWF9 (PHD finger protein MALE STERILITY 1 OS=Cucurbita maxima OX=3661 GN=LOC111498812 PE=4 SV=1)

HSP 1 Score: 1256.9 bits (3251), Expect = 0.0e+00
Identity = 624/647 (96.45%), Postives = 630/647 (97.37%), Query Frame = 0 

Query: 1   MADLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLG 60
           MADLI GKRRR AAA   SS++T++TS GDRVFRFKSFGKNGHPT FLG FWENVEALLG
Sbjct: 1   MADLIAGKRRRGAAA---SSTSTSSTSSGDRVFRFKSFGKNGHPTQFLGCFWENVEALLG 60

Query: 61  FGHWETGESSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHH 120
           FGHWETGE SNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATA ARHCKQCQYVGWGHH
Sbjct: 61  FGHWETGECSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAVARHCKQCQYVGWGHH 120

Query: 121 MISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEM 180
           MI NKRYHFVLPSK+TMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEM
Sbjct: 121 MICNKRYHFVLPSKDTMMAASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEM 180

Query: 181 GNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSR 240
           GNSLPGYIVMDFWDRLCNALKARKVSLRDIAQ KGMELRLLHSIAYGQPWFAQWGYKFSR
Sbjct: 181 GNSLPGYIVMDFWDRLCNALKARKVSLRDIAQKKGMELRLLHSIAYGQPWFAQWGYKFSR 240

Query: 241 GAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQF 300
           GAFKVTIQMNQRAIEALQ LPLSLLLHHLV AHPHIPFIFSKYQSLSIHPLHTLQDLLQF
Sbjct: 241 GAFKVTIQMNQRAIEALQTLPLSLLLHHLVIAHPHIPFIFSKYQSLSIHPLHTLQDLLQF 300

Query: 301 MLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQE 360
           MLNLKSPLP QNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQE
Sbjct: 301 MLNLKSPLPTQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQE 360

Query: 361 VRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRC 420
           VRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRC
Sbjct: 361 VRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRC 420

Query: 421 IVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTK 480
           IVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEY TEPQVKTK
Sbjct: 421 IVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYTTEPQVKTK 480

Query: 481 LETEGKQHILCTIRVKRQEA-TTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFV 540
           LETEGKQHILCTIRVKRQEA TTTLPYECIGLKNNGTIDELK+EVERNFKEMYWGLSRFV
Sbjct: 481 LETEGKQHILCTIRVKRQEATTTTLPYECIGLKNNGTIDELKKEVERNFKEMYWGLSRFV 540

Query: 541 VERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDD 600
           VERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDD
Sbjct: 541 VERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVEDD 600

Query: 601 GERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 647
           GERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP
Sbjct: 601 GERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 644

[Close]
BLAST of CmoCh06G008880 vs. ExPASy TrEMBL
Match: A0A1S3C4G3 (PHD finger protein MALE STERILITY 1 OS=Cucumis melo OX=3656 GN=LOC103496772 PE=4 SV=1)

HSP 1 Score: 1045.4 bits (2702), Expect = 9.7e-302
Identity = 522/655 (79.69%), Postives = 564/655 (86.11%), Query Frame = 0 

Query: 3   DLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLGFG 62
           D+I  KRRR                 G+RVF FKSFG+NGHP   +GRF ENVEALLGFG
Sbjct: 4   DVIGKKRRRGGGG-------------GERVFGFKSFGENGHPAELVGRFRENVEALLGFG 63

Query: 63  HWETGESSNR-FRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHM 122
            WE+GE S   FRCWSFRLQVQR PP HVVLFV+EE  E+ T A+R CKQCQYVGWG H 
Sbjct: 64  KWESGECSGEGFRCWSFRLQVQRQPPVHVVLFVLEEAVESCTVASRQCKQCQYVGWGTHT 123

Query: 123 ISNKRYHFVLPSKETMMAA--SSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLE 182
           I NK+YHFVLPSKETM+AA  SSNSKSMLS RLMEL+GHILHGVFHSNGFGHLLCLNGLE
Sbjct: 124 ICNKKYHFVLPSKETMVAASSSSNSKSMLSLRLMELEGHILHGVFHSNGFGHLLCLNGLE 183

Query: 183 MGNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFS 242
           MGNSLPGY++MDFWDRLCNALKARKVSLRDI+Q +GMELRLLHSIA+GQ WF +WGYKFS
Sbjct: 184 MGNSLPGYLLMDFWDRLCNALKARKVSLRDISQKRGMELRLLHSIAFGQSWFGEWGYKFS 243

Query: 243 RGAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQ 302
            G FKVTI  +Q+AIE LQ+LPLSLLLHH  S HP IPFIFSKYQSLS HPL TLQDLL 
Sbjct: 244 HGPFKVTIPKHQKAIETLQSLPLSLLLHHFASIHPQIPFIFSKYQSLSNHPLLTLQDLLH 303

Query: 303 FMLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQ 362
           FMLNLKSPL  QNS+ ++SH+L  FLLE S RWSPKRVEMAVRVI+EALKRAEFRWVSRQ
Sbjct: 304 FMLNLKSPLHTQNSM-EYSHSLAGFLLETSCRWSPKRVEMAVRVIIEALKRAEFRWVSRQ 363

Query: 363 EVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPR 422
           EVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSV+MKPR
Sbjct: 364 EVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVEMKPR 423

Query: 423 CIVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKT 482
           C VGR ELAKDISN+YKYILGDQK LQAKGILPTLTMASEIILDSKFLVKEYM+EPQ K 
Sbjct: 424 CKVGRVELAKDISNLYKYILGDQKPLQAKGILPTLTMASEIILDSKFLVKEYMSEPQTKF 483

Query: 483 KLETEGKQHILCTIRVKRQEATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFV 542
           +LE EGK ++LCTIR+KRQE TT LPYECI LKNNGTIDELK+EVERNFKE+YWGL  FV
Sbjct: 484 ELEIEGKLNLLCTIRLKRQETTTILPYECIALKNNGTIDELKKEVERNFKEIYWGLRSFV 543

Query: 543 VERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEGRVLINNND--------GIEKRIMEC 602
           V++IVDLEAKG DLVF L+EVGGKLVFEGSGEDEG   +NNN+        G+ KRIMEC
Sbjct: 544 VKKIVDLEAKGNDLVFGLVEVGGKLVFEGSGEDEGSFFMNNNNNNNTNNNGGMNKRIMEC 603

Query: 603 VCGAVEDDGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 647
           +CGA+EDDGERMVACDICEIWQHTRCVQIPNEQQVP IFICNRCDQEIALLHSLP
Sbjct: 604 ICGAMEDDGERMVACDICEIWQHTRCVQIPNEQQVPHIFICNRCDQEIALLHSLP 644

[Close]
BLAST of CmoCh06G008880 vs. ExPASy TrEMBL
Match: A0A6J1DTQ4 (PHD finger protein MALE STERILITY 1 OS=Momordica charantia OX=3673 GN=LOC111023034 PE=4 SV=1)

HSP 1 Score: 938.7 bits (2425), Expect = 1.3e-269
Identity = 473/655 (72.21%), Postives = 530/655 (80.92%), Query Frame = 0 

Query: 1   MADLIPGKRRRPAAATTSSSSTTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLG 60
           MA+ I  KRRR A               G++VFRFKSFG+NG+P  F+GRF ENV ALLG
Sbjct: 1   MAEAIGRKRRRGAG------------GGGEKVFRFKSFGENGYPVEFVGRFRENVVALLG 60

Query: 61  FGHWETGESSNRFRCWSFRLQVQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHH 120
           FG WE+G+ +   + WSF+LQVQR PPFH+V+FVVEEP EAA  A RHCK CQYVGWG H
Sbjct: 61  FGRWESGDCAGGLQSWSFQLQVQRQPPFHIVMFVVEEPVEAAPPAGRHCKDCQYVGWGQH 120

Query: 121 MISNKRYHFVLPSKETMMAASSNSKS-------MLSSRLMELQGHILHGVFHSNGFGHLL 180
           MI NK+YHFVLPSKETMMAASS S +        LS RL+EL+GHILHGVFHSNGFGHLL
Sbjct: 121 MICNKKYHFVLPSKETMMAASSCSNNSNPRLSLSLSLRLVELEGHILHGVFHSNGFGHLL 180

Query: 181 CLNGLEMGNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQ 240
            LNGLEMG++LPGY+VMDFWDRLCNALKARKVSLRDI+Q +GMELRLLH +A+G PWF +
Sbjct: 181 SLNGLEMGSTLPGYLVMDFWDRLCNALKARKVSLRDISQKRGMELRLLHGVAHGHPWFGR 240

Query: 241 WGYKFSRGAFKVTIQMNQRAIEALQALPLSLLLHHLVSAHPHI-PFIFSKYQSLSIHPLH 300
           WGYK  R AF  T+QM Q+A+ ALQ LP++     + +AHPHI P I SKY SLS HPL 
Sbjct: 241 WGYKLHRAAFSATLQMYQKALSALQRLPVAA----IAAAHPHILPPILSKYHSLSDHPLL 300

Query: 301 TLQDLLQFMLNLKSPLPAQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAE 360
           TL+DLL+F+L L +           SH    FL E S RWSPKRVEMAVRVIVEALKRAE
Sbjct: 301 TLRDLLRFVLGLHA--------AAESHNSAGFLPEASCRWSPKRVEMAVRVIVEALKRAE 360

Query: 361 FRWVSRQEVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCS 420
           FRWVSRQEVRDAAR+YIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCS
Sbjct: 361 FRWVSRQEVRDAARMYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCS 420

Query: 421 SVQMKPRCIVGRAELAKDISNVYKYILGDQKALQAKGILPTLTMASEIILDSKFLVKEYM 480
           +V MKPRC VGRAELAKDI N+Y+YILGDQK LQAKGI+PTLTMASEIILDSKFLVKEY 
Sbjct: 421 AVHMKPRCKVGRAELAKDIFNLYRYILGDQKPLQAKGIIPTLTMASEIILDSKFLVKEYS 480

Query: 481 TEPQVKTKLETEGKQHILCTIRVKRQEATTTLPYECIGLKNNGTIDELKREVERNFKEMY 540
            EP    +LE EGK ++ CT+R K QEATTTLPYECI +K NGTIDELK +VERN +E+Y
Sbjct: 481 GEPPAMPELEIEGKSNLFCTVRFKHQEATTTLPYECIAMKKNGTIDELKEDVERNMREIY 540

Query: 541 WGLSRFVVERIVDLEAKGRDLVFELMEVGGKLVFEGSGEDEG-RVLINNNDGIEKRIMEC 600
           WGL  FVVE IVDL+A+G+DLVF L+EVGGKLVFEG+  D+G   L  NN G+EKRIMEC
Sbjct: 541 WGLRSFVVEGIVDLKAQGKDLVFGLVEVGGKLVFEGNYGDQGISCLFFNNGGMEKRIMEC 600

Query: 601 VCGAVEDDGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 647
           VCGAVEDDGERMVACDICEIWQHTRCVQIPN+QQVP IFICNRCDQEIALLHSLP
Sbjct: 601 VCGAVEDDGERMVACDICEIWQHTRCVQIPNDQQVPHIFICNRCDQEIALLHSLP 631

[Close]
BLAST of CmoCh06G008880 vs. ExPASy TrEMBL
Match: A0A5D3CVJ6 (PHD finger protein MALE STERILITY 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00690 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.9e-250
Identity = 432/516 (83.72%), Postives = 466/516 (90.31%), Query Frame = 0 

Query: 139 AASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGNSLPGYIVMDFWDRLCN 198
           ++SSNSKSMLS RLMEL+GHILHGVFHSNGFGHLLCLNGLEMGNSLPGY++MDFWDRLCN
Sbjct: 5   SSSSNSKSMLSLRLMELEGHILHGVFHSNGFGHLLCLNGLEMGNSLPGYLLMDFWDRLCN 64

Query: 199 ALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQMNQRAIEALQ 258
           ALKARKVSLRDI+Q +GMELRLLHSIA+GQ WF +WGYKFS G FKVTI  +Q+AIE LQ
Sbjct: 65  ALKARKVSLRDISQKRGMELRLLHSIAFGQSWFGEWGYKFSHGPFKVTIPKHQKAIETLQ 124

Query: 259 ALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLPAQNSLQQHS 318
           +LPLSLLLHH  S HP IPFIFSKYQSLS HPL TLQDLL FMLNLKSPL  QNS+ ++S
Sbjct: 125 SLPLSLLLHHFASIHPQIPFIFSKYQSLSNHPLLTLQDLLHFMLNLKSPLHTQNSM-EYS 184

Query: 319 HTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQEVRDAARIYIGDTGLLDFV 378
           H+L  FLLE S RWSPKRVEMAVRVI+EALKRAEFRWVSRQEVRDAARIYIGDTGLLDFV
Sbjct: 185 HSLAGFLLETSCRWSPKRVEMAVRVIIEALKRAEFRWVSRQEVRDAARIYIGDTGLLDFV 244

Query: 379 LKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRCIVGRAELAKDISNVYKYI 438
           LKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSV+MKPRC VGR ELAKDISN+YKYI
Sbjct: 245 LKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVEMKPRCKVGRVELAKDISNLYKYI 304

Query: 439 LGDQKALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTKLETEGKQHILCTIRVKRQ 498
           LGDQK LQAKGILPTLTMASEIILDSKFLVKEYM+EPQ K +LE EGK ++LCTIR+KRQ
Sbjct: 305 LGDQKPLQAKGILPTLTMASEIILDSKFLVKEYMSEPQTKFELEIEGKLNLLCTIRLKRQ 364

Query: 499 EATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFVVERIVDLEAKGRDLVFELM 558
           E TT LPYECI LKNNGTIDELK+EVERNFKE+YWGL  FVV++IVDLEAKG DLVF L+
Sbjct: 365 ETTTILPYECIALKNNGTIDELKKEVERNFKEIYWGLRSFVVKKIVDLEAKGNDLVFGLV 424

Query: 559 EVGGKLVFEGSGEDEGRVLINNND--------GIEKRIMECVCGAVEDDGERMVACDICE 618
           EVGGKLVFEGSGEDEG   +NNN+        G+ KRIMEC+CGA+EDDGERMVACDICE
Sbjct: 425 EVGGKLVFEGSGEDEGSFFMNNNNNNNTNNNGGMNKRIMECICGAMEDDGERMVACDICE 484

Query: 619 IWQHTRCVQIPNEQQVPQIFICNRCDQEIALLHSLP 647
           IWQHTRCVQIPNEQQVP IFICNRCDQEIALLHSLP
Sbjct: 485 IWQHTRCVQIPNEQQVPHIFICNRCDQEIALLHSLP 519

[Close]
BLAST of CmoCh06G008880 vs. TAIR 10
Match: AT5G22260.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 563.1 bits (1450), Expect = 2.8e-160
Identity = 315/663 (47.51%), Postives = 420/663 (63.35%), Query Frame = 0 

Query: 28  RGD-RVFRFKSFGKNGHPTHFLG-RFWENVEALLGFGHWETGESSNRFRCWSFRLQVQRH 87
           RG+ RVFR K+FG++GHP       F +N+  LL FGH+   ESS     WSF+L++QR+
Sbjct: 19  RGESRVFRLKTFGESGHPAEMNELSFRDNLAKLLEFGHF---ESSGLMGSWSFQLEIQRN 78

Query: 88  P-PFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMA----- 147
           P P +V+LFVVEEP EA+      C  CQYVGWG+ MI NK+YHFV+PSKETM A     
Sbjct: 79  PNPLYVLLFVVEEPIEASLNL--RCNHCQYVGWGNQMICNKKYHFVIPSKETMAAFLKLE 138

Query: 148 ----ASSNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGNSLPGYIVMDFWDR 207
               A    +S   S L+ELQGH+LHG FHSNGFGHLL LNG+E G+ L G+ VMD WDR
Sbjct: 139 GGGYAFPEKESF--SHLVELQGHVLHGFFHSNGFGHLLSLNGIETGSDLTGHQVMDLWDR 198

Query: 208 LCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQMNQRAIE 267
           LC  LKARK+ L D +  KGMELRLLH +A G+PWF +WGY+F  G + VT ++ ++A+E
Sbjct: 199 LCTGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQKIYEKALE 258

Query: 268 ALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLPAQNSLQ 327
           +++ +PL LL HHL S +   P + SKYQSLS  PL TL DL +FML+L S LP  N + 
Sbjct: 259 SVRNIPLCLLNHHLTSLNRETPILLSKYQSLSTEPLITLSDLFRFMLHLHSRLPRDNYMS 318

Query: 328 QHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALKRAEFRWVSRQEVRDAARIYIGDTGLL 387
              + + + +   + RWS KR++MA++V++E+LKR E+RW+SRQEVRDAAR YIGDTGLL
Sbjct: 319 NSRNQIIS-IDSTNCRWSQKRIQMAIKVVIESLKRVEYRWISRQEVRDAARNYIGDTGLL 378

Query: 388 DFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRCI-------------- 447
           DFVLKSLGN VVGNYLVRR+LNPV KVLEY L+D+ + +      +              
Sbjct: 379 DFVLKSLGNQVVGNYLVRRSLNPVKKVLEYSLEDISNLLPSSNNELITLQNQNSMGKMAT 438

Query: 448 -----VGRAELAKDISNVYKYILGDQKALQAK--GILPTLTMASEIILDSKFLVKE--YM 507
                + R ++ KD+   YK+IL D K +     GIL  + MAS  ILD+K+ +KE  Y+
Sbjct: 439 NGHNKITRGQVMKDMFYFYKHILMDYKGVLGPIGGILNQIGMASRAILDAKYFIKEYHYI 498

Query: 508 TEPQVKTKLETEGKQ-HILCTIRVKRQEATTTL---PYECIGLKNNGTIDELKREVERNF 567
            +   KT     G++  I CTI  K       +   P ECI +K + T+ E+  E ER F
Sbjct: 499 RDTSAKTLHLDRGEELGIFCTIAWKCHHHNNEIKVPPQECIVVKKDATLSEVYGEAERVF 558

Query: 568 KEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGGK-LVFEGS----GEDEGRVLINNNDG 627
           +++YW L   VVE +V  + +    V E+   G K LV EG+       E      ++D 
Sbjct: 559 RDIYWELRDVVVESVVGGQIE-ITRVDEMALNGNKGLVLEGNVGMMMNIEVTKCYEDDDK 618

Query: 628 IEKRIMECVCGAVEDDGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRCDQEIALLH 647
            + + +EC CGA E+DGERMV CDICE+WQHTRCV + + ++VP+IF+C  CDQ +  L 
Sbjct: 619 KKDKRIECECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHLIPLS 672

[Close]
BLAST of CmoCh06G008880 vs. TAIR 10
Match: AT1G66170.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 335.9 bits (860), Expect = 7.3e-92
Identity = 220/676 (32.54%), Postives = 344/676 (50.89%), Query Frame = 0 

Query: 22  TTTTTSRGDRVFRFKSFGKNGHPTHFLGRFWENVEALLGFGHWETGESSNRFRCWSFRLQ 81
           T     R  +V+  + FG++G P    G F + +   L                W   L 
Sbjct: 8   TCRKRKRKPKVYNLQRFGEDGFPIQRNGAFRDQIRVFLRDCAEIEDYDIRGMTVWCTLLS 67

Query: 82  VQRHPPFHVVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMAAS 141
            +      + L++VEE  + ++    +C  C+  GW +H +S ++YHF++P         
Sbjct: 68  HETKSSL-IPLYIVEENVKHSSEP--YCDHCRCTGWSNHFVSKRKYHFIIP-------ID 127

Query: 142 SNSKSMLSSRLMELQGHILHGVFHSNGFGHLLCLNGLEMGNS-LPGYIVMDFWDRLCNAL 201
           +     L     + Q H+LHG+ H NGFGHL+C+NG+E G+  L G  ++DFWDRLCN+L
Sbjct: 128 TEWSLPLEDDAFDSQSHVLHGLIHCNGFGHLVCVNGMESGSKYLCGREIVDFWDRLCNSL 187

Query: 202 KARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQMNQRAIEALQAL 261
            AR +++ D+A+ + +ELRLL+ +AYG  WF +WGYKF  G+F VT    + AIEAL +L
Sbjct: 188 GARMITVEDLAKKRSVELRLLYGVAYGHSWFGRWGYKFCCGSFGVTKNEYENAIEALGSL 247

Query: 262 PLSLLLHHL--VSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLPAQNSL---- 321
            +  +      +     I  +F  Y+ +S   L T +DLL+FML +KS    Q  L    
Sbjct: 248 EIDQIEFDFGELRQSKEINQVFRYYREMSEGHLKTFRDLLRFMLIIKSHASPQKLLPVTP 307

Query: 322 -----QQHSHTLPAFLLENS----------------------SRWSPKRVEMAVRVIVEA 381
                  H       LL+ S                      SRW  +R+  A  VIVE+
Sbjct: 308 PLLTDSPHQKRSSRLLLKKSDVADNDKSPKYRNYSTVAANLGSRWPVRRLIFAAEVIVES 367

Query: 382 LKRAEF---RWVSRQEVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLE 441
           LK  +      ++RQ+VRD+AR++IGDTGLLD+VLKS+ N VVG+ LVRR ++P+T++L 
Sbjct: 368 LKEMKALKQNGMTRQDVRDSARLHIGDTGLLDYVLKSMNNVVVGDVLVRRYVDPITRILH 427

Query: 442 YCLQDVCSSVQMK-PRCIVGRAELAKDISNVY--------KYILGDQKALQAKGIL---- 501
           Y +QD+  +V+ K P+     A + ++I+ +           + GD   L    +L    
Sbjct: 428 YTIQDLDDAVKAKEPK--KKEAVVLEEITPLRILTPLKPGADVYGDLLLLYTNVLLNYPE 487

Query: 502 -PTLTMASEIILDSKFLVKEYMTEPQVKTKLETEGKQHILCTIR-----VKRQEATTTLP 561
              +  A++ ILDSK  +KE+       T L+       LC I      V+ ++ T   P
Sbjct: 488 SELVRSATQAILDSKHFIKEWPIWDNNDTVLQ------FLCRINPSLVDVRSEQTTELPP 547

Query: 562 YECIGLKNNGTIDELKREVERNFKEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGGKLV 621
            E + +    T+ +LK+ +E  F++ Y  LS FVV  I ++E         L+     L 
Sbjct: 548 GELVTVPLQATVYDLKQAIEETFRDTYCILSNFVVTEIDEVEED-----MSLIGSCSALT 607

Query: 622 FEGSGED-EGRVLINNNDGIEKRIMECVCGAVEDDGERMVACDICEIWQHTRCVQIPNEQ 641
             G G D E +  +    G +  +++C+C A +DDGERM++CD+CE+WQHTRC  I +  
Sbjct: 608 VRGHGIDLESK--LKCQGGCDTWMVKCICRARDDDGERMISCDVCEVWQHTRCCGIDDSD 658

[Close]
BLAST of CmoCh06G008880 vs. TAIR 10
Match: AT2G01810.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-73
Identity = 188/602 (31.23%), Postives = 288/602 (47.84%), Query Frame = 0 

Query: 109 CKQCQYVGWGHHMISNKRYHFVLPSKETMMAASSNSKSMLSSRLMELQGHILHGVFHSNG 168
           C  C+  GWGHH ++ ++YH ++P+++            L    + L  H++HG+ H NG
Sbjct: 98  CDFCRCFGWGHHYVTKRKYHMIIPNRDEW-------NEPLKRESLTLSSHLMHGLIHCNG 157

Query: 169 FGHLLCLN-GLEMGNSLPGYIVMDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYG 228
           FGHLLC+N  L+  N L G  +MDFWDRLC+ L  RK+SL D ++   M+LRLLH +AYG
Sbjct: 158 FGHLLCINTDLDDPNHLSGDQIMDFWDRLCSTLHTRKISLDDTSKKGAMDLRLLHGVAYG 217

Query: 229 QPWFAQWGYKFSRGAFKVTIQMNQRAIEALQALPLSLLLHHL--VSAHPHIPFIFSKYQS 288
           +PWF +W Y FS G+F V   +  RAI  L ++ +  +L  L   S    +  I   Y+ 
Sbjct: 218 RPWFGKWDYMFSHGSFGVKKDLYWRAILTLSSIEVDKILEELSGTSKGRVMKKIIDFYRG 277

Query: 289 LSIHPLHTLQDLLQFMLNL--KSPL--------------------------------PAQ 348
            +  PL TL DLL+FML    K+P+                                P Q
Sbjct: 278 STESPLATLSDLLRFMLGFISKAPIERKTAMALVAMSLDHVSYPTLRADENSEVCTSPDQ 337

Query: 349 NS------------LQQHSHTLPA-----------FLLENSSRWSPKRVEMAVRVIVEAL 408
            S            L  H+ T                    SRW  +R+  A + +++  
Sbjct: 338 ESDDNGYESGRDTVLDDHNTTTSGIKPPQYYSFDDLSRREHSRWPGRRLNDAAQAVLKVF 397

Query: 409 KRAEFRWVSRQEVRDAARIYIGDTGLLDFVLKSLGNHVVGNYLVRRTLNPVTKVLEYCLQ 468
           K      +SRQ++R+A R  IGDTGL+DF+LK +   ++G+ +V+R+ NP +++L++ L+
Sbjct: 398 KERN-STISRQDLREAVRSSIGDTGLIDFLLKHIDKVLIGDQIVQRSTNPKSRMLQFSLR 457

Query: 469 DVCSSVQ---------MKPR----CIVGRAELAKDISNVYKYILGDQKALQAKGILPTLT 528
            + S VQ         +KP+    C      L+     +Y Y    Q  L         +
Sbjct: 458 TINSRVQEQKRKKKRKVKPQETSECTSTTPGLSPYDDILYLY----QNLLLTYPDSDLYS 517

Query: 529 MASEIILDSKFLVKEYMTEPQVKTKLETEGKQHILCTIRVKRQEATTTL-PYECIGLKNN 588
            AS++IL  K  VKE+  + Q    +  +    +L       ++ T  L P + + +  N
Sbjct: 518 EASQVILKCKSFVKEWSYQEQNHLTVSCQ----VLPNHEELLRDFTRLLPPGDLVAVPEN 577

Query: 589 GTIDELKREVERNFKEMYWGLSRFVVERIVDLEAKGRDLVFELMEVGG-KLVFEGSGEDE 636
            TI ELK   E+  ++ Y     F V  I +   +  D    L   G  + + +G G D 
Sbjct: 578 ATIRELKSAAEKVLRDTYCITETFEVLEIRNRYLEKLDDNVSLKSQGNTEFMVKGFGLDI 637

[Close]
BLAST of CmoCh06G008880 vs. TAIR 10
Match: AT1G33420.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 263.5 bits (672), Expect = 4.6e-70
Identity = 175/577 (30.33%), Postives = 288/577 (49.91%), Query Frame = 0 

Query: 90  VVLFVVEEPAEAATAAARHCKQCQYVGWGHHMISNKRYHFVLPSKETMMAA--------- 149
           V L VVEE    ++ +  +C+ C  VGW  H +  KRY F++ S     A          
Sbjct: 92  VSLDVVEEDVTRSSRSV-YCEHCCVVGWSSHPVCRKRYRFIIRSGGDTKACTRCGNTQNL 151

Query: 150 SSNSKSMLSSRLMELQG----------HILHGVFHSNGFGHLLCLNGLEMGNS-LPGYIV 209
           S  S     S  ++++           H+LHGV HSNG+ HLLCLNG E G+  L G  +
Sbjct: 152 SEGSNCKWCSMALDIENWVYSQLEDNTHLLHGVIHSNGYAHLLCLNGREGGSGFLTGRAI 211

Query: 210 MDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQM 269
           MDFWDRLC++L  RK S+ D+++  GM+ RLLH I  G  W+++WGY+F  G++ +T + 
Sbjct: 212 MDFWDRLCSSLAVRKASVMDVSRKYGMDYRLLHGITRGCSWYSEWGYEFKSGSYALTKEA 271

Query: 270 NQRAIEALQALPLSLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKSPLP 329
            Q A++ L A+PLS  L         +  I S YQSLS   L T++DL  F+L +     
Sbjct: 272 YQSAVDTLSAIPLSEFLFQGRKPRTQLHSIISFYQSLSCSELVTVKDLFSFLLQM----- 331

Query: 330 AQNSLQQHSHTLPAFLLENSSRWSPKRVEMAVRVIVEALK---RAEFRWVSRQEVRDAAR 389
               ++++S + PA        WS   VE   + +V+ LK   R +  WV+R  ++ +  
Sbjct: 332 ----IRENS-SKPASKSSVLCAWSKSDVERVQQTMVKILKASGRPQANWVTRWALKRSI- 391

Query: 390 IYIGDTGLLDFVLKSLGNHVV--GNYLVRRTLNPVTKVLEYCLQDVCSSVQMKPRCIVGR 449
                  L+D+ LK  G  +V  G+ +V    NP +   EY L+ V +  ++  + +   
Sbjct: 392 CKSASPQLIDYCLKHFGGVLVDDGSRVVSSRCNPGSNDFEYRLESVNNVHRLSNQDVNNA 451

Query: 450 A--ELAKDISNVYKYILGDQ--KALQAKGILPTLTMASEIILDSKFLVKEYMTEPQVKTK 509
           +   + +D+  +Y+ +L  Q     +++     +  A+  ILD K  +K+Y++       
Sbjct: 452 SVEHVKQDLRYLYETLLHPQTMAEFRSRATREKMIDAATKILDCKHFIKDYLSSTVNPVA 511

Query: 510 LETEGKQHILCTIRVKRQ-EATTTLPYECIGLKNNGTIDELKREVERNFKEMYWGLSRFV 569
           +      ++ C + +  + + +   P E + L  N T+ +LK E  + F+E+Y    RF 
Sbjct: 512 I------NLWCCVELSDELKESPAPPPERLVLPLNATVSDLKIEAAKAFQEVYAMFKRFE 571

Query: 570 VERIVDLEAKGRDLVFE-LMEVGGKLVFEGSGEDEGRVLINNNDGIEKRIMECVCGAVED 629
           VE ++   +    +  + L+   G +  +G     G +      G++   ++C CG  +D
Sbjct: 572 VEELLGYGSIDDSITLKFLVGTNGVIRIKGRCSKHGLLRYRMERGVDNWKVDCKCGTKDD 631

Query: 630 DGERMVACDICEIWQHTRCVQIPNEQQVPQIFICNRC 636
           DGERM+ACD C +W HTRC+ I N   +P  F+C RC
Sbjct: 632 DGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRC 650

[Close]
BLAST of CmoCh06G008880 vs. TAIR 10
Match: AT2G07714.1 (transcription factor-related )

HSP 1 Score: 93.2 bits (230), Expect = 8.2e-19
Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 0 

Query: 190 MDFWDRLCNALKARKVSLRDIAQNKGMELRLLHSIAYGQPWFAQWGYKFSRGAFKVTIQM 249
           MD WDR C  L  RK++L D +Q + M+LRLLH +AYG  WF +WGY+F  G+F V    
Sbjct: 1   MDLWDRFCVNLHTRKITLEDESQKRSMDLRLLHGVAYGHSWFGKWGYRFCSGSFGVEEHH 60

Query: 250 NQRAIEALQALPL---SLLLHHLVSAHPHIPFIFSKYQSLSIHPLHTLQDLLQFMLNLKS 309
             RAI  L ++ L            A+ +I  I   Y+ +S   L TLQDLL+FML +KS
Sbjct: 61  YHRAIAFLTSISLVDDITANFRENKANLNIGDIVRCYRDMSEIQLTTLQDLLRFMLTIKS 120

The following BLAST results are available for this feature:
BLAST of CmoCh06G008880 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FMS53.9e-15947.51PHD finger protein MALE STERILITY 1 OS=Arabidopsis thaliana OX=3702 GN=MS1 PE=1 ... [more]
Q67V611.1e-14542.09PHD finger protein PERSISTENT TAPETAL CELL 1 OS=Oryza sativa subsp. japonica OX=... [more]
Q7X6Y71.0e-9032.54PHD finger protein MALE MEIOCYTE DEATH 1 OS=Arabidopsis thaliana OX=3702 GN=MMD1... [more]
Q9ZUA92.8e-7231.23PHD finger protein At2g01810 OS=Arabidopsis thaliana OX=3702 GN=At2g01810 PE=3 S... [more]
Q9C8106.4e-6930.33PHD finger protein At1g33420 OS=Arabidopsis thaliana OX=3702 GN=At1g33420 PE=1 S... [more]
BLAST of CmoCh06G008880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G3J70.0e+00100.00PHD finger protein MALE STERILITY 1 OS=Cucurbita moschata OX=3662 GN=LOC11145041... [more]
A0A6J1KWF90.0e+0096.45PHD finger protein MALE STERILITY 1 OS=Cucurbita maxima OX=3661 GN=LOC111498812 ... [more]
A0A1S3C4G39.7e-30279.69PHD finger protein MALE STERILITY 1 OS=Cucumis melo OX=3656 GN=LOC103496772 PE=4... [more]
A0A6J1DTQ41.3e-26972.21PHD finger protein MALE STERILITY 1 OS=Momordica charantia OX=3673 GN=LOC1110230... [more]
A0A5D3CVJ62.9e-25083.72PHD finger protein MALE STERILITY 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of CmoCh06G008880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22260.12.8e-16047.51RING/FYVE/PHD zinc finger superfamily protein [more]
AT1G66170.17.3e-9232.54RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G01810.12.0e-7331.23RING/FYVE/PHD zinc finger superfamily protein [more]
AT1G33420.14.6e-7030.33RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G07714.18.2e-1943.09transcription factor-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 590..636
e-value: 2.1E-8
score: 43.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 578..640
e-value: 3.8E-16
score: 60.4
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 591..637
e-value: 1.2E-9
score: 37.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 588..638
score: 8.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27
NoneNo IPR availablePANTHERPTHR46201:SF1PHD FINGER PROTEIN MALE STERILITY 1coord: 27..646
NoneNo IPR availablePANTHERPTHR46201PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATEDcoord: 27..646
NoneNo IPR availableCDDcd15556PHD_MMD1_likecoord: 590..635
e-value: 6.51414E-24
score: 92.8277
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 591..635
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 580..638

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G008880.1CmoCh06G008880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048655 anther wall tapetum morphogenesis
biological_process GO:0071367 cellular response to brassinosteroid stimulus
biological_process GO:0055046 microgametogenesis
biological_process GO:0009846 pollen germination
biological_process GO:0010208 pollen wall assembly
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding