CmoCh06G008700 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G008700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ubiquitin-like domain-containing protein
Location	Cmo_Chr06: 4960566 .. 4966137 (+)
RNA-Seq Expression	CmoCh06G008700
Synteny	CmoCh06G008700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAAACTAGGTGAAATATAAAGAAAAACATTTCAGCTGGATCCGGTTTGAAGGGATTGCAGACTCTGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTTGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTACGGAAACCTTTCTTCTTCTTCTTCTTCTTCGATATTGATTGATTTTGTTTCATCAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGGTATAATTGCGGTATTCTGCTGATTGCGGGATATTTCTTTCTGTTGTTTGTATCACGGTCGTCTGAAATACTATATGTAGTCTAGGTTTATACTTTCTCTATTGCTTTTCTGTATATACCGCCCTTTTCATGGTGATGCTGGCCCTTTTGATGACTATACATGCTTCAGCTTTCAAAATGTCGTTGTGATGCATGTTTCTCCATATTACACATTTCTTGCTTCGATCTTCTAGGTTCTGGACTATCATTTTTCATATGCTAGTACCTGCTTGGATTCTAGTTACAAATAAAAGCAAGAAAATGTCCCACTGCTGAAAATTGAATCATGATTCTTGCTTATTGATCTTGTTTTTTTTTTTTGTCTAATCGACCTGTCTTGTGTTGTTCGTGGTACTTTGGCTTCTTGTTGCACAGTATCTGTTTCTTTGTTGTTCTGATGCTTTCTATACTGTTCTGAATGGTTTGAGTTTCTATGGGCTTATCATTTGACAATTCAGTTTGAAATCAGTAATTGGATGCCTCCGTTTCTTGTGTAGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGGTATGAACCATTAAGTATTTCAATTGTTGTTCTTAGACAGGAAGCTTAGCTTGAAGCTGTTCTCAATTATCTGTTTCGCATCAATGGTTACATTTTCAGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGGTAATAATCATATACTAAATTATGCCAAGAAGTTCTATGTACGAATTTTCTAATTTCATTTTGGTTCTTTGTTCTGTGAATAGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATGTAAGTAATAATGTTCTGTTAGTTACTAGATTTTGAATTTTGGTGCCATTATTTTCGGTAGTTGACATTTTATGGCAACCTTAGGAGCTGTTTCTTAAACAGTTCTGCAAATCAGTTTTTCAAAAATATTTTTAGTATTGCAACATAATTAACAAGTGTCTTAGAATATGGTTTCACTGTGTTTGATCATTGTTATCCCATTGTGTGGTCTGAAAAAACCAATTTCAATTGTTCTTAAAAAATCAACACATTTTGCAGATAATAAAGCAAGAGAAAACAATTTTTAGCACACAATTACTTCAAAATGTTATCAAATTGGAGTATTTGGTGCGGAAAATTACTGTTTTTCAATTTGACTTTCGTAAATCCTCTCATTTTTTTGGGTAGTGTCTTCTCTCAGCAAGTGACAATTTCTATTCTCCATATACTTTTTTGAAGCTGAAGTACCTTATTCTAGTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTGCTACGTTTGAGTAATTTTTGCAGATACTTGGCACTGGCTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGGTAAGTAGTATTTGAGAGAAACTCTCATCCCATTCATGTCCAGCTGAGTTGTAGAAGGACTTTTGTATGCTTTAGATAAACTAAGTCAAGGCATGATTGTGTGTTTATACATTCTCCAATCTCATGGCTTGTCCAGTTGTTTGTTCTTAAATGTGTTCGGTCCCTACACATTTGTGGAAAAGGAAAAGTATGCGGTTAAAGGGTAACAATAAGAATGGGTGACGATGCAAATTGATTAGTAGAGGTGGGAATTAGAAAGAATAAGAACCTAGGAAGCTGGTGAGAACTATAGCATAATGAAATACTTATAGCTAGGGGTGTCAAAAGAGAAGATGTTATTCTTTAGGTGGTGCTCGGAAGTCTCAATTTCTCCCTCTTGTTTGTGCAACTTTCCACTATTTTTCAATTACATATCTACTGAGTAGTGGTACTCGAATAATCGGTTCCTAGGACTTGATGGTTGCAAATAGGAAAATAGAGAATCGCTTGGAAGCAATTGAGGAGAAGTTACTATAATGTTTAAATAGACTTGTCGGTAATGCATTGGGCAGGGGATGCAGGAAATGCACAAGGAGATGAGCCATTTGATGGAATACTATATGGAAAATATAATGAATATTGAGTTTGGGGCTAATCTTGTGCCAACCTCAGAAAATAAGGATAAGGTTCCAATCATACAAGCAAAGTATGGCATCAATTAAGTGCTAGATTAAGGAAGGGGGAAGGCTTCGATAGGATCATCATCTAGAACAAGGGGGAAGGGCATCATAGAGAACTAATGAGGATCCAAAGTGGAGATTTGAAATGGAAATTTCTAGTGACCCGCTGTGACCTGCTATCCTTAGCTGAGTGATACTTGAACGATCATAAATTGATTGAGAAGATTGTGGTAGCAACACTTCAATGTTAATAAATTGGTTGAGGAGAAGCTTGAGCGGGCAACAATGTATATGAAGGGAGAGGCATTGAAATGGTTTTAGCAGGAGGAAAGATGCAAGTCTTTCAAAAATTGGATTGGGTAGCAAGGAAAAAGATAGTTGCTAAGGCTACTTTGGAAATTGCAAGAGGAATCACACTCGAGAGATTTCGAGCTGTGTAATTAGAGACTACCATGAGGGAGTATGAAAGGCATTTCAGCATCATTGATTGGCATAACATGATGGGTTCTGGATGGTGAAGTAAGAATTATTCCATAGGCACTTGTGTCAGCTGCCAGTGATGCTCATCTATGGTCAAGAACCTGGCATAGAGGAAGAATAATATCTAACAGAGGAGGATATGGTGGTACATACAGAATATCTAATAGCTGATATGGTGCCATAGATACAATAAAAAAGAGATTCGTTAAAAAATGGAGTGGAGTAGAGAGGTGCATTGTGATGAAATTGTTGATGGGGTTGTCATTGATTTCAATGGTGGGCTTTGATATATACATACATATATATTAGTTCAACCAACAACAATGGTGGAGTGGAGATTCGAATCTATGATGGTAGAAGATATACTTAATTAGTTGAGCTAAGTTCAGATTGGATGGGTTTGATATATATTTTAGTATGATGAAGAACTACGGGATGGATATGAGGAGAGGTGATAGATATAGTATTTTAATCAGTTGAATTATGCTCACGTTGGTTGGACTTCGATATATTTTCTAGGACGATAGAGATCGAGGGATAACTATGAGCAAAGGTGATTGATATAATATATTAACCAGTTGAGTTATACTCAGGTTGGGTTTGATATATTTTCTAGGATGTTGAAGATCACGGGATGAATATAAGGAGAGGCGATAGCGTTAACTGTTTGTGGTGAGACAATTTTATTTCGAAGAAATTGTAGAACCCTTAGGATTGCCAACGACCGAAACTTCAAGTTATGGAGTAGTAATGAATGGGCAGAATATTTGTTCAAGGGGGTAATACAAATGTGTGACAAGAGGAGCTGATGCTTTCAGATTCAAGACTGGGGGTTTTCTTGAGGGTCATTAACGATAAGTTAAGGATTATGACACAAGTCTTTGACAAAAGCAGATAGATGAGGAAATTGATAAATAATGTATCAAGGAGAAGCTGTGACAAGGTACCTCTTCCATTTCAGGTACTTGATGCATCATGCTTCATTATGTCACAATAATAATTGCATGAGCTCAAGCTGAGAATGTAGTCAATAATTTCTTTCGTGGAGTTGCTTGTTTACGTGGGGTTCCTGGAAGTACTGTCCCCGATCATGATCGTAGTTAGACTAGTAATATTTTGTCAAAACTATTTAAATGGCAAGGCATGTTCTCCTTGTCATCCAATTTGAGGTGATTAGTTGAGGACAAGGATCGTAATTTGCTCTAACGAAACCCGAACCATAAGCTTGTTTGCAACTTGTGATAACTTGCGTAGATAGTGCTTCAGTTGCGTAGTTTAACATTTGTGATGGGTATGTGTAAGCGGACCACATAAGTACTGATTCAATGGAAAGGGATGTGTGCTGATGATGTCACATGGGATCCAGCCATCACATAATATCCATTTGTAACCTCTCTTTGCCTCGAGGGCAGCGTTGCTATTTGAGGTCGGGGGTACTGGACGGCCCCTGACCCAAACAAAATGCAATGGAAGGAGATGGAAGATGATTGGGCAATGCATCTGCACAGTGATGTAAACTGATTAGAGGAAGCCCACCGTTAGCAGATCTTGTCCGCTTAGATTCATTACATATTACCATCAGTCTCACTCTTTTAAAATGCGTCTACTAGGGAGAAGTTTCCACGCTCCTATAAAAAAATATTTTGTTCTTCTCTCCACCTGACGTGGGATCTTACATAGGAATTAATAGGAATCTAGGAGGTTCATTAGGGAACACCAACATGTAAATACATATAGCAAGACGGTAACAGAAAGAGTGATTAACGGGATACTAGAGCAATTGAAAGTTCTTGAATTCTCCCTATTATAAGAATAACGTCCAAATAGTTTTCATCAACATTTCCACGTCAGGTGTATTAAAAATGTTGTGTGAATGCAATCTCTTTCAGCCTCTATATGGGCTCATTAATTACAGGTTTTATGTGCATGGTAGCTTGCATGATGACACTGTTATATTGCGAACATTATTCTGAGGTGTGAATGTCGAATTTTTGCAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGTAAAATGATTGATTGGCATTTGTTGTGTTGTGTTGTGTTTGATGAAAGACCAACAACACATTTAGAAGGGAAAACCATGATTATAAATTGGTCCA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAACTAGGTGAAATATAAAGAAAAACATTTCAGCTGGATCCGGTTTGAAGGGATTGCAGACTCTGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTTGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATATACTTGGCACTGGCTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGTAAAATGATTGATTGGCATTTGTTGTGTTGTGTTGTGTTTGATGAAAGACCAACAACACATTTAGAAGGGAAAACCATGATTATAAATTGGTCCA

Coding sequence (CDS)

ATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATATACTTGGCACTGGCTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGA

Protein sequence

MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF

Homology

[Close]

BLAST of CmoCh06G008700 vs. ExPASy TrEMBL
Match: A0A6J1G8B5 (uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC111451749 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.7e-132
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of CmoCh06G008700 vs. ExPASy TrEMBL
Match: A0A6J1KZE8 (uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.3e-128
Identity = 234/240 (97.50%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNI G PNSSITYGNPPENTIEITIRTIGPARPSRLLVPS IKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNIGGAPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSRIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDD KNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of CmoCh06G008700 vs. ExPASy TrEMBL
Match: A0A6J1CW45 (uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014834 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 216/240 (90.00%), Postives = 225/240 (93.75%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNI GG NSS +  NPPENT++I +RTIGPARPSRL VPSP+KV DLRK
Sbjct: 1   MAEIVEEHNFNRNIIGGGNSSSSNANPPENTVQIIVRTIGPARPSRLFVPSPVKVRDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE +QLPIGNLKLILRGKILDD KNDDDV+VRLN G+SLTVAVKPKPPAEHLRD  DD
Sbjct: 61  LVAESNQLPIGNLKLILRGKILDDYKNDDDVYVRLNDGESLTVAVKPKPPAEHLRDGFDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of CmoCh06G008700 vs. ExPASy TrEMBL
Match: A0A0A0L1Y1 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011840 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.9e-116
Identity = 209/240 (87.08%), Postives = 226/240 (94.17%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNR+I+GG +SSI+   PP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE ++LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILLMV+FSLSLK WAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of CmoCh06G008700 vs. ExPASy TrEMBL
Match: A0A1S4DY93 (uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.1e-112
Identity = 206/240 (85.83%), Postives = 220/240 (91.67%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNIS          NPP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRNISN--------RNPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE S+LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESSRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILL+V+FSLSLK WAAIL+WFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLVVVFSLSLKGWAAILLWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 232

[Close]

BLAST of CmoCh06G008700 vs. TAIR 10
Match: AT2G35360.1 (ubiquitin family protein )

HSP 1 Score: 265.4 bits (677), Expect = 4.5e-71
Identity = 130/209 (62.20%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 31  TIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDDD 90
           T+EIT +TIGPARPS++ V S IK+ DLR  +AE+ + P+  L++ILRGK L D ++ DD
Sbjct: 17  TVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGKFPVSTLRMILRGKALQDEEDGDD 76

Query: 91  VFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLKF 150
           ++V L   DS  VAV P PPA  +    DDD+DDLKF+LP S+SR K+K+Y FLR KLK 
Sbjct: 77  LYVTLKDQDSFIVAVIPNPPA-GVESFDDDDDDDLKFKLPPSASRWKRKLYYFLRNKLKL 136

Query: 151 PDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEMS 210
           PDI+LM +FSLSLK W  I +WFI+AP+AH WDLGP++ILGTGF IILLNLG R+ G++S
Sbjct: 137 PDIILMGLFSLSLKMWVIITLWFILAPIAHRWDLGPIFILGTGFSIILLNLGKRQPGDVS 196

Query: 211 AYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           AYSIFNE FRELPGT NADR+DRD+R GQ
Sbjct: 197 AYSIFNEDFRELPGTYNADRIDRDIRAGQ 224

The following BLAST results are available for this feature:

BLAST of CmoCh06G008700 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G008700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8B5	2.7e-132	100.00	uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A6J1KZE8	5.3e-128	97.50	uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482...	[more]
A0A6J1CW45	1.2e-116	90.00	uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0L1Y1	7.9e-116	87.08	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011...	[more]
A0A1S4DY93	3.1e-112	85.83	uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=...	[more]

BLAST of CmoCh06G008700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35360.1	4.5e-71	62.20	ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019387	Uncharacterised domain SAYSvFN	PFAM	PF10260	SAYSvFN	coord: 169..234 e-value: 1.3E-24 score: 85.8
None	No IPR available	GENE3D	3.10.20.90		coord: 23..119 e-value: 1.8E-5 score: 26.2
IPR039159	SAYSvFN domain-containing protein 1	PANTHER	PTHR13527	UNCHARACTERIZED	coord: 33..240
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 32..84 score: 11.202653
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 28..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008700.1	CmoCh06G008700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding