CmoCh06G008530 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G008530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionpoly(U)-specific endoribonuclease-B-like
LocationCmo_Chr06: 4783711 .. 4789298 (-)
RNA-Seq ExpressionCmoCh06G008530
SyntenyCmoCh06G008530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTTGGCACCTTTCCGTTCAATTTCAACGTTGCAATTACCCGCCATCTTTCCAGACCTTACCTTTTATTCAACCACCTCCTTCGCTACTCTCAATTCACTCTCTCTCTCTATCTCTGCATCTGAAAATGGAGGGTTTAATCAAGGGTCTCATAGATGTTGCAATCGGTCACGACGACGACAAGAACAACGAACAATCGGCTTCCCAGTCTCGTGACGAACGATCCAGATCCACTTGGGCTCAGGTACCTCTGGGTTTTGTGATACTGGATTTGGTTTTTAACATGTTTTGTGATGATTTGGGCTTGGGATTGTGCAGGTAGTCACTGGGGAGGAGGATGCGGATCGAGATGGGGGAGATCGGGGACATGATCGGAGACATGGGAATGATTGGAATCGGAGGGACAATGAGGTCGGTTTTGGGCTGAGATTGATTGTGGAATTGAATGTATTTGTGGTTTTGAATTGGACTTTATGTGGAATTGAAATCTGGGGTGTTATTGATCGTTTTTCCAGAAAGAGGGTCGTTCGCGGCGTGAGGAGTGGGAGGTTCAGGGTTCGAGGATTTCTGGTCAACAACAGCAGGTTAGATCTGTTTGCGTCACCATTCCAAGTGTTGGGATCATTTTTTCTCATTGTTATACTACTCTCAAGTCGCTCTAATGATCTTTCCTTCCAATGAGATTTAGGCATTTTGCAAGTTTAGATTCACATTTCAGTTGGGTAATTAATAGGAAGCAAAGAAAATACACTCTTGAATTTATGAGAGAAACTATAAAACTACTTTGAATCTGTAGTTAATGGTTACTAGAGAATGAAGATATTCAAATCTATATTCAACTGTCATTAGAAAGTTGTTACATTGATAATTTTGTAGGAAGCGGGGTTTGGATAAAATTACTGCTTAGCATATGGTATAACAATATAATACCATTGAAAGTGTAGGCCTTGAGCGGATAGAGACTTTTTATTAGAAAATGGCAAACCATGACCAAGCCTTCCCCTCCCACCACCACTCACCCTGATAATGGCAATAACCCCACCTCTGAAGAATAGAACAGTTCCCATCGAAAGAAAGAAGTTCCATAGTGTTGGATGGTAGGTATGGAGCGAGTAGAGTGAAGATTTCAGAGTTTACTGGAGACAGGGTCTTCTTCATAGCTTTACATTGGGAAACTTTGAATTGGCTGTTATGGCCCCTTAATCCCTAATCCTATGGACAATTCTCTACTAATTCTCTTTTAGCAGACATGGGTCGTATCACTTACCTACCTCATTGAGACCTCTTTGTCTAAACCCATATAGAAGGACAACTACCCAAAGAAACTCCAAATTTTCCTTTGGGAGCTATGGCACAGTCATCAATACCAAAAATATTCTCCAAAGGCTTATGCTATTCATGACTTTATCCCCTGGGTGGTGTTCTCTTTGTAAACCTGATGACGAAACCCAGAGTCACATCTTTATATACTGTCCATTTGCCAGGAGATTCTTCCTTTGGCTGGCATTTGGTTTGTCCTACAAATGTTAAGGATTTTCTCATCTCAGTTTCTATTGGGGCACCCATTCAAGAATATTAAGGCTTTGCTGTCATAAATTTTACATCCCATTTGTAAATTTCATGCTTCAATGAATTACATACATACATATATACATACATAAATATGTATGTGTTGTATATTATATGTAGATACATACATATATACATACATATATACATGTATATCGAGTAAATTGTACAAGCTTTGTTATTTCGACCTCTTCTAAGGTCTTATCATTTGATTCTTATCTTGATATCTATCAAGTTGCTTACTCTAGAAAGAGAACTTTTCCCGCAAGTGATGATAAATGCTGCAGTTGCTTGTATTAGAATTTTTTTTTTTTTTGACATTTTCTTTTATTAGATTCAATTACGTGGATTGATGTTTTACTATTTTATCACTATTTTAGTCCTAATAGCAGTTTCATTTCCTCCAATCTGATTGATAAAATGCTGACTTCATATGAAACGTGTGAACAGGGTGAATATGGTAGCGAGCATGGTTACAACAGAGATCAGTGGGCTAAAAAGGTATTTTTCTCTTGTTCTTTAATTTTCTGTGTTTTCTATTCCATGAAATTGATTGGGCCCTTTTTGATCACCATTTGGTTTTTGATTTTTAGGTTTCGAAATTGAAGCCTATAAATGGGGGTTTCCTTGTTTTGATATCTACTTTTTATATATTTTCACAAACCAAGCCATGTTTAGAAAACTAAAAAAAGTAGTTTTTAAAATCTTGTTTTAGTTTATGAATTTAGCAAAGAATTCAAATGTTTTCTTTAAGAAAGATGAAATTCATGGTAGAAAAATAATGTGAAAACATGCACAATGTTCCAAATCTAAAAACCAACTAGAAATAAAAAATAAATTGGTTATCAAACGAGAACTTAGTTCTTTTCACTTATATTTTCTAATGGTATTAACTGGCACAGGAGAGCTCTGAGGAGAACAATGATGGGTGGGAGACTGTCCACAAAAAGGCACCTAGGAAACATCACAAGGTTACTTATCATACGAAAAGTATTTTGACAAATACATGTTGGATGTGTTGTTTTATATGGCCAATTAGTCCATATACTTGCTTGGAAGAGAACTTGTAACAAAATTTCAGTTATTTTATACATTACATTAAAGAGAGCCTTAACGTTATGCAAGATGTCATTGAGTCTGAATGCCTGACTTGGATGGTGTACGAACATAACGATGAAATCATTGGTGAAGCTCTTGAAGTAAGCAATGTTTGTAAGCATGATGATCATGGGCATTTATGATGTTCATTTAGAACTAAAAGTTGATTGTGTTTATTAGTTGATAATTGGGGTGTGCAGTAGCATTAGTTATGGTTAGCAAATCTTGAGTGTGGCATATTTAGCTACAGATGCATAATTAGTCATACCTTTTCCAATCGTACTATCTTTTTTGATTTTTTCCTTTTTTTAGAGCAAGAAACCAAACTTTCATTGAGAAAAATAATAATAATATATAAAGGCATACAAAAAAAACAATCATGTTTAATCTACAAATGGGTGTTCACCTTGGGATCATGCCGTCATCTATGTGGTGGTAGTCTGATGTTTGGAGGATTCAGAGGATTTGTGATGTTTGATGTTTCTATTACAAGATCATGCTTACCATGCATTTCAATTTACTCATTTTTAATTTATAGAAGTGGCATTTTCACCTAGTTTCTGTGCAAGTCGTTTTGATTTTTGAATAGTGGTGAACTTTGAGAGGTTTCATGATAGTTGCTTGGAGTTCAAACAAACTCTAAAATTTACTCCTCTGCAATAAATTTTTAGGTGCAGGTAGAAAATTGGGAAGGATACAAACGGCCTGCCAGTGAACAAAACTATTCTGATGAGGTGGAAGTAGGTGCTGAGCTAGAACCCTCTGAGGACGAGCTTGCTGATTTTGCCCGGGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCTGGACAAGATTATGAAATTGATTGCGGTGAAGGAAAAAGGGTCCACGGAAGGGAAGATATGGCACAAGCAAGCCTCTTTAGTTGGGTTAGTGAAGACGTATTTAGGAAGCCAACATTTTCACGTTTTTGCTCTCTACTTGATAACTACAATCCCGATCAAGGGAGCAAAGAAGTTGTGACACCTGAGGAGAAGCAAGAGCAGGCTGCATTCATAGAAGAAATTAGTAGAACTGCACCAATTAAGTACCTTCATAAGTACCTTTCATACAAGGGAGTTACATCCAATGACTATCAAGATTTCAAACGTATGCTGACCAGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTCATTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGCAACAAGGTGGACAAGAGGTTTCTGGTTTCCACAACTGGCTTCAGGTTAGTGCCTTCCTGAGATTAGCTATCACAGAAGATAATGCTTAAATTTTAAGCTATAAATGATCAATCTGTTTAATATTGTATCTAACCGTTGAGGCCCTTCATGTATTCACCAAGAGCAATAGCAACGGGGCGGAACAAAGAAGGAAAATGTTGCCCTCTTAGCTTGTCTTAGGTTAAAAAACTATATAAAATGGTCAAAATTTTAAGGTTTTCTCTCTAATTTGCTAATTTCCGAATTATATATATAATAAGAAAAGTTAGAAAGTAACATCTTTCTTCATCGTTTGTAAACTCTGGATCCTCCCCTTAAATGGAAATGAACAACTTGGATCAGTTCGTCTTAGAAGACATTTTTAAATTGTGAAGTTGACTGGGTTCTTGTACGTAAATGAATATAACATTTTGTCCACAAATCTAACGAACCTATCATTTTCTTAATATTAGTATTTTCTTTGCTGGAGTTTCCCGAACTTATTATCTTCCTTTATGTCTGACTTTTTTTCCATGTGCATTTATTCCAAATCTAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTTGACTATCAAGGTTATATTTTCCCCAGACGACGTGGCCAGTTTGTAAGTAACTCAACTTCACGGTTTTTTCTTTTGGTGGTATTTGATGTTGAGATGTAAAGAAATAAGTTGTGAATGCCCATGTCATGCAGCATCATTCAGGCTGTTAAAAGAAACTAAATGATCATTTATCATTCAGGCCTTTTGTGGTTACCATACAAGAATAACCTTCATTTTCCTGACATTCTTCAGGCGATTAAATTTGTGTTATTCCATCAAACTTTAGTTTTCATTAGATCAGCCTTTCCCACTTTAAATTCTAGAGCTTGCCTCACTTTCTGGAAGATAAGCATACTCTTCTCTGTAATCTAATCCATGTCTCTTACTTAACTATTTATTTGCTAACCCTGCAGCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTGTATACACTATGCTTCTTCCTTGGCGGAGAGGATAACCATGTTGAGCTCGGACCATATCCTGTTAATATCAAGTGCTATCGGTTAGGAAACAAAATCGGGTCTGTGTTTCCTGTAGCTGAGTCTTGAAGTTCCTTCACTGGGATTAATCCAGTTATTTCGTCTAAATTCAGCCGTATACATCTAAGTAAGGATTGTATCATAGATTTTGAGATAGTGATATCTTTAGAAGGTGACCAAATACTTTGTGATGGAATAACATGATTCTCAGGATGTACTCATTAGTTCCTAGAGGATACTTGAACTTTTGTATTATCACATGGATTTGCAAGGGGTGCCTTCATATCTTCCTTATTTTGTAAATGCTTTGTAACGATACTGAGTCAAGCAACTGATGTTTGCTTTCATTTCTTCCCAAAACTGAATGCATGTGAAACATTATCCAAATGGAGTTGATTCTCACTTTTCCTTCTATATGTATATTCATTTTGTACCTTTCTCTGCATATTGCTACTATGTAATATCAATTCAATTCAATTCAATTCTTATTCTATAACATGGGGAGGAACTTGGATCATATACGG

mRNA sequence

CACTTGGCACCTTTCCGTTCAATTTCAACGTTGCAATTACCCGCCATCTTTCCAGACCTTACCTTTTATTCAACCACCTCCTTCGCTACTCTCAATTCACTCTCTCTCTCTATCTCTGCATCTGAAAATGGAGGGTTTAATCAAGGGTCTCATAGATGTTGCAATCGGTCACGACGACGACAAGAACAACGAACAATCGGCTTCCCAGTCTCGTGACGAACGATCCAGATCCACTTGGGCTCAGGTAGTCACTGGGGAGGAGGATGCGGATCGAGATGGGGGAGATCGGGGACATGATCGGAGACATGGGAATGATTGGAATCGGAGGGACAATGAGAAAGAGGGTCGTTCGCGGCGTGAGGAGTGGGAGGTTCAGGGTTCGAGGATTTCTGGTCAACAACAGCAGGGTGAATATGGTAGCGAGCATGGTTACAACAGAGATCAGTGGGCTAAAAAGGAGAGCTCTGAGGAGAACAATGATGGGTGGGAGACTGTCCACAAAAAGGCACCTAGGAAACATCACAAGGTGCAGGTAGAAAATTGGGAAGGATACAAACGGCCTGCCAGTGAACAAAACTATTCTGATGAGGTGGAAGTAGGTGCTGAGCTAGAACCCTCTGAGGACGAGCTTGCTGATTTTGCCCGGGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCTGGACAAGATTATGAAATTGATTGCGGTGAAGGAAAAAGGGTCCACGGAAGGGAAGATATGGCACAAGCAAGCCTCTTTAGTTGGGTTAGTGAAGACGTATTTAGGAAGCCAACATTTTCACGTTTTTGCTCTCTACTTGATAACTACAATCCCGATCAAGGGAGCAAAGAAGTTGTGACACCTGAGGAGAAGCAAGAGCAGGCTGCATTCATAGAAGAAATTAGTAGAACTGCACCAATTAAGTACCTTCATAAGTACCTTTCATACAAGGGAGTTACATCCAATGACTATCAAGATTTCAAACGTATGCTGACCAGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTCATTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGCAACAAGGTGGACAAGAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTTGACTATCAAGGTTATATTTTCCCCAGACGACGTGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTGTATACACTATGCTTCTTCCTTGGCGGAGAGGATAACCATGTTGAGCTCGGACCATATCCTGTTAATATCAAGTGCTATCGGTTAGGAAACAAAATCGGGTCTGTGTTTCCTGTAGCTGAGTCTTGAAGTTCCTTCACTGGGATTAATCCAGTTATTTCGTCTAAATTCAGCCGTATACATCTAAGTAAGGATTGTATCATAGATTTTGAGATAGTGATATCTTTAGAAGGTGACCAAATACTTTGTGATGGAATAACATGATTCTCAGGATGTACTCATTAGTTCCTAGAGGATACTTGAACTTTTGTATTATCACATGGATTTGCAAGGGGTGCCTTCATATCTTCCTTATTTTGTAAATGCTTTGTAACGATACTGAGTCAAGCAACTGATGTTTGCTTTCATTTCTTCCCAAAACTGAATGCATGTGAAACATTATCCAAATGGAGTTGATTCTCACTTTTCCTTCTATATGTATATTCATTTTGTACCTTTCTCTGCATATTGCTACTATGTAATATCAATTCAATTCAATTCAATTCTTATTCTATAACATGGGGAGGAACTTGGATCATATACGG

Coding sequence (CDS)

ATGGAGGGTTTAATCAAGGGTCTCATAGATGTTGCAATCGGTCACGACGACGACAAGAACAACGAACAATCGGCTTCCCAGTCTCGTGACGAACGATCCAGATCCACTTGGGCTCAGGTAGTCACTGGGGAGGAGGATGCGGATCGAGATGGGGGAGATCGGGGACATGATCGGAGACATGGGAATGATTGGAATCGGAGGGACAATGAGAAAGAGGGTCGTTCGCGGCGTGAGGAGTGGGAGGTTCAGGGTTCGAGGATTTCTGGTCAACAACAGCAGGGTGAATATGGTAGCGAGCATGGTTACAACAGAGATCAGTGGGCTAAAAAGGAGAGCTCTGAGGAGAACAATGATGGGTGGGAGACTGTCCACAAAAAGGCACCTAGGAAACATCACAAGGTGCAGGTAGAAAATTGGGAAGGATACAAACGGCCTGCCAGTGAACAAAACTATTCTGATGAGGTGGAAGTAGGTGCTGAGCTAGAACCCTCTGAGGACGAGCTTGCTGATTTTGCCCGGGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCTGGACAAGATTATGAAATTGATTGCGGTGAAGGAAAAAGGGTCCACGGAAGGGAAGATATGGCACAAGCAAGCCTCTTTAGTTGGGTTAGTGAAGACGTATTTAGGAAGCCAACATTTTCACGTTTTTGCTCTCTACTTGATAACTACAATCCCGATCAAGGGAGCAAAGAAGTTGTGACACCTGAGGAGAAGCAAGAGCAGGCTGCATTCATAGAAGAAATTAGTAGAACTGCACCAATTAAGTACCTTCATAAGTACCTTTCATACAAGGGAGTTACATCCAATGACTATCAAGATTTCAAACGTATGCTGACCAGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTCATTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGCAACAAGGTGGACAAGAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTTGACTATCAAGGTTATATTTTCCCCAGACGACGTGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTGTATACACTATGCTTCTTCCTTGGCGGAGAGGATAACCATGTTGAGCTCGGACCATATCCTGTTAATATCAAGTGCTATCGGTTAGGAAACAAAATCGGGTCTGTGTTTCCTGTAGCTGAGTCTTGA

Protein sequence

MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRHGNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGNKIGSVFPVAES
Homology
BLAST of CmoCh06G008530 vs. ExPASy Swiss-Prot
Match: Q503V9 (Poly(U)-specific endoribonuclease-B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-57
Identity = 119/265 (44.91%), Postives = 153/265 (57.74%), Query Frame = 0

Query: 177 KLWELDLNRLVPGQDYEID----CGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCS 236
           +LW+ D NRL PG DY I      G+   V    D A   LFS+V E++F+K TF  F S
Sbjct: 14  ELWDNDTNRLRPGIDYRISLQGKAGDLAGVPDDSDGAGMPLFSFVDENIFKKETFLAFIS 73

Query: 237 LLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRML 296
           LLDNY  D G  E+VTPEE+ E   F++ + +T  +K  HKYL  K ++  D   FK+ L
Sbjct: 74  LLDNYESDTGEPEIVTPEEEMENHRFLDSVIKTPTMKIAHKYLVEKRLSPEDTTGFKQQL 133

Query: 297 TSLWFDLYGRGGTSH-SSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGY 356
             +WF+LY R G+S   SS FEHVFVGE +  GG  V GFHNW+Q YL+E  G +DY+GY
Sbjct: 134 YKIWFELYARKGSSKPDSSGFEHVFVGETR--GGHTVIGFHNWIQLYLQEKLGHIDYKGY 193

Query: 357 IFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLG-GEDNHV 416
                  Q PD    +L +QF W   +K   S  +GVSPEFE +LYTLCF +   E   V
Sbjct: 194 SVNANSPQ-PDENKHMLALQFSWKNGIKPKGSIFIGVSPEFEFSLYTLCFLMSPNERVKV 253

Query: 417 ELGPYPVNIKCYRLGNK-IGSVFPV 435
               Y V I C+    K IG+ +PV
Sbjct: 254 SFNLYDVEIVCHHYNQKHIGTTYPV 275

BLAST of CmoCh06G008530 vs. ExPASy Swiss-Prot
Match: B1WBB4 (Poly(U)-specific endoribonuclease-B OS=Xenopus laevis OX=8355 GN=endou-b PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.8e-52
Identity = 114/275 (41.45%), Postives = 157/275 (57.09%), Query Frame = 0

Query: 170 DFARACNKLWELDLNRLVPGQDYEIDCGEGK------RVHGREDMAQASLFSWVSEDVFR 229
           + ++  N+LW+ D+NR+  G+DY I   +GK      R +  +D A   LF +V E+  +
Sbjct: 11  ELSKLFNELWDADVNRMKAGKDYRISL-QGKAGYVPARSNQAKDSASYPLFQFVDEEKLK 70

Query: 230 -KPTFSRFCSLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTS 289
            K TF+ F SLLDNY  D G  EVVTPEE  E   F++ I  T  +K  H YL  K    
Sbjct: 71  SKKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAK 130

Query: 290 NDYQDFKRMLTSLWFDLYGRG-GTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEE 349
               DFK  L S+WF LY R  G+   S  FEHVFVGE K+  G+E+ G HNW+QFYL+E
Sbjct: 131 PSQNDFKVQLYSIWFQLYSRAPGSRPDSCGFEHVFVGESKR--GKEMMGLHNWVQFYLQE 190

Query: 350 AKGSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCF 409
            + ++DY+GY+  R+    PD + Q+L +QF W  ++K V S+ +GVSPEFE ALYT+ F
Sbjct: 191 KRKNIDYKGYV-ARQNKSRPDEDDQVLNLQFSWKEMVKPVGSSFIGVSPEFEFALYTIVF 250

Query: 410 FLGG---EDNHVELGPYPVNIKCYRLGNKIGSVFP 434
                      + L  Y + I   R G  IG+ +P
Sbjct: 251 LASQAKMSREVIRLEEYELQIVVNRHGRYIGTAYP 281

BLAST of CmoCh06G008530 vs. ExPASy Swiss-Prot
Match: Q8JFY9 (Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-51
Identity = 115/276 (41.67%), Postives = 156/276 (56.52%), Query Frame = 0

Query: 170 DFARACNKLWELDLNRLVPGQDYEIDCGEGKR------VHGREDMAQASLFSWVSEDVFR 229
           + ++  N+LW+ D NR+  G+DY I   +GK        +   D A   LF +V E+  +
Sbjct: 11  ELSKLFNELWDADQNRMKSGKDYRISL-QGKAGYVPAGSNQARDSASFPLFQFVDEEKLK 70

Query: 230 -KPTFSRFCSLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTS 289
            + TF+ F SLLDNY  D G  EVVTPEE  E   F++ I  T  +K  H YL  K    
Sbjct: 71  SRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAK 130

Query: 290 NDYQDFKRMLTSLWFDLYGRG-GTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEE 349
               DFK  L ++WF LY R  G+   S  FEHVFVGE K+  GQE+ G HNW+QFYL+E
Sbjct: 131 PTRNDFKVQLYNIWFQLYSRAPGSRPDSCGFEHVFVGESKR--GQEMMGLHNWVQFYLQE 190

Query: 350 AKGSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCF 409
            + ++DY+GY+  R+    PD + Q+L +QF W  ++K V S+ +GVSPEFE ALYT+ F
Sbjct: 191 KRKNIDYKGYV-ARQNKSRPDEDDQVLNLQFNWKEMVKPVGSSFIGVSPEFEFALYTIVF 250

Query: 410 FLGGED---NHVELGPYPVNIKCYRLGNKIGSVFPV 435
               E      V L  Y + I   R G  IG+ +PV
Sbjct: 251 LASQEKMSREVVRLEEYELQIVVNRHGRYIGTAYPV 282

BLAST of CmoCh06G008530 vs. ExPASy Swiss-Prot
Match: B1H3D5 (Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51
Identity = 113/276 (40.94%), Postives = 155/276 (56.16%), Query Frame = 0

Query: 170 DFARACNKLWELDLNRLVPGQDYEIDCGEGKR------VHGREDMAQASLFSWVSEDVFR 229
           + ++  N+LW+ D NR+  G+DY I   +GK        +   D A   LF +V E+  R
Sbjct: 12  ELSKLFNELWDADENRMKAGKDYRISL-QGKAGYVPAGSNQARDSASYPLFQFVDEEKLR 71

Query: 230 -KPTFSRFCSLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTS 289
            + TF+ F SLLDNY  D G  EVVTPEE  E   F++ I  T  +K  H YL  K    
Sbjct: 72  SRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNTFLDAILETKVMKIAHDYLVRKNQAK 131

Query: 290 NDYQDFKRMLTSLWFDLYGRG-GTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEE 349
               DFK  L ++WF LY R  G    S  FEHVFVGE K+  G+E+ G HNW+QFYL+E
Sbjct: 132 PSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKR--GKEIMGLHNWVQFYLQE 191

Query: 350 AKGSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCF 409
            + ++DY+GY+  R+    PD + Q+L +QF W  ++K + S+ +GVSPEFE ALYT+ F
Sbjct: 192 KRKTIDYKGYV-GRQNKSRPDHDDQVLNLQFSWKEMVKPIGSSFIGVSPEFEFALYTVVF 251

Query: 410 FLGGED---NHVELGPYPVNIKCYRLGNKIGSVFPV 435
               E      V +  Y + I   R G  IG+ +PV
Sbjct: 252 LTSQEKMTREVVRVEEYEMQIVVNRHGRYIGTAYPV 283

BLAST of CmoCh06G008530 vs. ExPASy Swiss-Prot
Match: Q1LUM3 (Poly(U)-specific endoribonuclease-C OS=Danio rerio OX=7955 GN=endouc PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.1e-47
Identity = 111/271 (40.96%), Postives = 155/271 (57.20%), Query Frame = 0

Query: 176 NKLWELDLNRLVPGQDYEIDCGEGKRVHGRE------DMAQASLFSWVSEDVFRK-PTFS 235
           N+LW+LD+NR+ P  +Y I   +GK  +  +      D A + LF  V E       T++
Sbjct: 36  NELWKLDVNRMEPLTNYNISL-QGKAGYIPQGSTNVVDHASSPLFVNVDEAKLSSITTYA 95

Query: 236 RFCSLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDF 295
           RF  LLDNY    G  E VT EE  E  +F++ I  TA +K  H+YL  KG + +D + F
Sbjct: 96  RFMKLLDNYERSTGVAERVTAEEVTENNSFLDAILETAVMKRAHQYLIGKGKSRSDLRQF 155

Query: 296 KRMLTSLWFDLYGR---GGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGS 355
           K  L  +WF LY R   GG    SS FEHVFVGE K   G+E+ G HNW+QFYL+E +  
Sbjct: 156 KSQLYYMWFRLYHRERNGG--EDSSGFEHVFVGETK--FGREIMGLHNWVQFYLQEKQNL 215

Query: 356 VDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGG 415
           +DY+GY    R    PD++  +L +QF W+G++K V+S  VGVSPEFE+A++T+ F    
Sbjct: 216 LDYKGY--KARANDVPDADDHVLNVQFSWHGLVKPVASAFVGVSPEFEMAVFTILFLTST 275

Query: 416 EDNH---VELGPYPVNIKCYRLGNKIGSVFP 434
           E      V L  Y + +  +R G  IG+ +P
Sbjct: 276 EKTTTAVVNLDEYQLEMVVHRHGRCIGTAYP 299

BLAST of CmoCh06G008530 vs. ExPASy TrEMBL
Match: A0A6J1F7L9 (poly(U)-specific endoribonuclease-B-like OS=Cucurbita moschata OX=3662 GN=LOC111443088 PE=3 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 3.5e-255
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRH 60
           MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRH
Sbjct: 1   MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRH 60

Query: 61  GNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGW 120
           GNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGW
Sbjct: 61  GNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGW 120

Query: 121 ETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWE 180
           ETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWE
Sbjct: 121 ETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWE 180

Query: 181 LDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPD 240
           LDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPD
Sbjct: 181 LDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPD 240

Query: 241 QGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLY 300
           QGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLY
Sbjct: 241 QGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLY 300

Query: 301 GRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQF 360
           GRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQF
Sbjct: 301 GRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQF 360

Query: 361 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIK 420
           PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIK
Sbjct: 361 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIK 420

Query: 421 CYRLGNKIGSVFPVAES 438
           CYRLGNKIGSVFPVAES
Sbjct: 421 CYRLGNKIGSVFPVAES 437

BLAST of CmoCh06G008530 vs. ExPASy TrEMBL
Match: A0A6J1L240 (poly(U)-specific endoribonuclease-B-like OS=Cucurbita maxima OX=3661 GN=LOC111498407 PE=3 SV=1)

HSP 1 Score: 862.1 bits (2226), Expect = 1.0e-246
Identity = 426/440 (96.82%), Postives = 432/440 (98.18%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKN--NEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDR 60
           MEGLIKGLIDVAIGHDDD N  NEQSA QSRDERSRSTWAQVVTGEEDAD+DGGDRGHDR
Sbjct: 1   MEGLIKGLIDVAIGHDDDNNNSNEQSAPQSRDERSRSTWAQVVTGEEDADQDGGDRGHDR 60

Query: 61  RHGNDWNRRDNEKEGRSRR-EEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENN 120
           RHGNDWNRRDN K+GRSRR EEWEV+GSRISGQ+QQGEYGSEHGYNRDQWAKKESSEENN
Sbjct: 61  RHGNDWNRRDNVKQGRSRREEEWEVEGSRISGQRQQGEYGSEHGYNRDQWAKKESSEENN 120

Query: 121 DGWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNK 180
           DGWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNK
Sbjct: 121 DGWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNK 180

Query: 181 LWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNY 240
           LWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWV+EDVFRKPTFSRFCSLLDNY
Sbjct: 181 LWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVNEDVFRKPTFSRFCSLLDNY 240

Query: 241 NPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWF 300
           NPDQGSKEVVTPEE+QEQAAFIEEISRTAPIKYLHKYL YKGV SNDYQDFKRMLTSLWF
Sbjct: 241 NPDQGSKEVVTPEERQEQAAFIEEISRTAPIKYLHKYLLYKGVASNDYQDFKRMLTSLWF 300

Query: 301 DLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR 360
           DLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR
Sbjct: 301 DLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR 360

Query: 361 GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV 420
           GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV
Sbjct: 361 GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV 420

Query: 421 NIKCYRLGNKIGSVFPVAES 438
           NIKCYRLGNKIGSVFPVAES
Sbjct: 421 NIKCYRLGNKIGSVFPVAES 440

BLAST of CmoCh06G008530 vs. ExPASy TrEMBL
Match: A0A6J1DMN3 (poly(U)-specific endoribonuclease-B-like OS=Momordica charantia OX=3673 GN=LOC111022649 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 6.7e-214
Identity = 369/437 (84.44%), Postives = 402/437 (91.99%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRH 60
           MEGLIKG++D+A+GHDD++ +E+SA QSRDERSRSTWAQVV+GEEDA         DRR 
Sbjct: 1   MEGLIKGVLDIALGHDDNR-DEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQ 60

Query: 61  GNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGW 120
           G   NRRD+E+EGRSRR+EWEV+GSRISGQ+QQGEY SEHG+NR+ WA +E SEE NDGW
Sbjct: 61  GYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWATEEGSEEKNDGW 120

Query: 121 ETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWE 180
           ETVHKK PR+ HKVQ++NW GYKRP SEQNYSDEVEVGAELEPSEDELAD +RACNKLWE
Sbjct: 121 ETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWE 180

Query: 181 LDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPD 240
           LDLNRLVPG+DYEIDCGEGKRV GREDMA+  LFSWVSED FRKPTFSRFCSLLDNYNPD
Sbjct: 181 LDLNRLVPGKDYEIDCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPD 240

Query: 241 QGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLY 300
           QGS+E+VT EE+QEQAAF+EEISRTAPIKYLHKYLS  GVT NDYQDFKR+LTSLWFDLY
Sbjct: 241 QGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLY 300

Query: 301 GRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQF 360
           GRGGTS SSSAFEHVFVGEIKQ+G QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQF
Sbjct: 301 GRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQF 360

Query: 361 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIK 420
           PDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFELALYTLCFFLGGEDNHVELGPYP+NIK
Sbjct: 361 PDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNHVELGPYPINIK 420

Query: 421 CYRLGNKIGSVFPVAES 438
           CYRLGNKIGSVFPVAES
Sbjct: 421 CYRLGNKIGSVFPVAES 428

BLAST of CmoCh06G008530 vs. ExPASy TrEMBL
Match: A0A0A0L6P1 (XendoU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017000 PE=3 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 8.8e-214
Identity = 375/436 (86.01%), Postives = 399/436 (91.51%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRH 60
           MEGLIKGLIDVAIG+D D N++QS SQSR++RSRSTWAQVVTGEED        G DRR 
Sbjct: 1   MEGLIKGLIDVAIGNDGDNNDQQSPSQSREDRSRSTWAQVVTGEED--------GGDRRD 60

Query: 61  GNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGW 120
           G   NRR+NE+EGRSRREEWEV+ SRISGQ++Q EYGSEHGYNR+QWAK+ESSEE NDGW
Sbjct: 61  GYHRNRRNNEEEGRSRREEWEVEDSRISGQRKQSEYGSEHGYNRNQWAKEESSEEKNDGW 120

Query: 121 ETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWE 180
           ETVHKK  R+ HKVQ +NW GYKRPASEQNYSDEVEVGAELEPSEDELAD + ACNKLW+
Sbjct: 121 ETVHKKPTRRQHKVQTDNWGGYKRPASEQNYSDEVEVGAELEPSEDELADLSYACNKLWK 180

Query: 181 LDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPD 240
           LDLNRLVPG+DYEIDCGEGKRV GREDMAQ SLFSWVSE+V RKPTFSRFCSLLDNYNP+
Sbjct: 181 LDLNRLVPGKDYEIDCGEGKRVSGREDMAQGSLFSWVSEEVLRKPTFSRFCSLLDNYNPN 240

Query: 241 QGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLY 300
           QGSKEVVTPEE+QEQAAFIEEISRTAPIKYLHKYLS KGV SN+YQDFKRMLTSLWFDLY
Sbjct: 241 QGSKEVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVASNEYQDFKRMLTSLWFDLY 300

Query: 301 GRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQF 360
           GRGGT  SSSAFEHVFVGEIKQQG QEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQ 
Sbjct: 301 GRGGTCGSSSAFEHVFVGEIKQQGEQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQC 360

Query: 361 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIK 420
           PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFE+ALYTLCFFLGGEDNHVELGPY VNIK
Sbjct: 361 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEVALYTLCFFLGGEDNHVELGPYAVNIK 420

Query: 421 CYRLGNKIGSVFPVAE 437
           CYR GNK+GSVFP+AE
Sbjct: 421 CYRFGNKMGSVFPIAE 428

BLAST of CmoCh06G008530 vs. ExPASy TrEMBL
Match: A0A1S3BLB7 (poly(U)-specific endoribonuclease-B OS=Cucumis melo OX=3656 GN=LOC103490825 PE=3 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 3.1e-211
Identity = 372/436 (85.32%), Postives = 396/436 (90.83%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDRRH 60
           MEGLIKGLIDVAIG+D D N++QSASQSR+ERSRSTWAQVVTGEED        G DRR 
Sbjct: 1   MEGLIKGLIDVAIGNDGDNNDQQSASQSREERSRSTWAQVVTGEED--------GGDRRD 60

Query: 61  GNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENNDGW 120
           G D NR +NE+EGRSRREEWEV+ SRISGQ++Q EYGSEHGYNR+QWAK+E SEE NDGW
Sbjct: 61  GCDRNRWNNEEEGRSRREEWEVEDSRISGQRKQSEYGSEHGYNRNQWAKEEGSEEKNDGW 120

Query: 121 ETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKLWE 180
           ETVHKK  R+ HK+Q +NW GYKRPASEQNYS+EVEVGAELEPSEDELAD + AC KLW+
Sbjct: 121 ETVHKKPTRRQHKIQTDNWGGYKRPASEQNYSNEVEVGAELEPSEDELADLSYACKKLWQ 180

Query: 181 LDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYNPD 240
           LDLNRLVPG+DYEIDCGEGKRV GREDMAQ SLFSWVSEDVF KPTFSRFCSLLDNYNP+
Sbjct: 181 LDLNRLVPGKDYEIDCGEGKRVSGREDMAQGSLFSWVSEDVFGKPTFSRFCSLLDNYNPN 240

Query: 241 QGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFDLY 300
           QG KEVVTPEE+QEQAAFIEEISRTAPIKYLH+YLS KGV SNDYQDFKRMLTSLWFDL 
Sbjct: 241 QGCKEVVTPEERQEQAAFIEEISRTAPIKYLHRYLSSKGVASNDYQDFKRMLTSLWFDLC 300

Query: 301 GRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQF 360
           GR GTS SSSAFEHVFVGEIKQQG QEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQ 
Sbjct: 301 GRCGTSGSSSAFEHVFVGEIKQQGEQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQC 360

Query: 361 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIK 420
           PDSETQLLTIQFEWNG+LKSVSSTLVGVSPEFE+ALYTLCFFLGGEDNHVELGPY VNIK
Sbjct: 361 PDSETQLLTIQFEWNGILKSVSSTLVGVSPEFEVALYTLCFFLGGEDNHVELGPYAVNIK 420

Query: 421 CYRLGNKIGSVFPVAE 437
           CYRLGN IGSVFP+AE
Sbjct: 421 CYRLGNNIGSVFPIAE 428

BLAST of CmoCh06G008530 vs. TAIR 10
Match: AT4G17100.1 (CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998); Has 943 Blast hits to 770 proteins in 162 species: Archae - 0; Bacteria - 61; Metazoa - 472; Fungi - 40; Plants - 78; Viruses - 35; Other Eukaryotes - 257 (source: NCBI BLink). )

HSP 1 Score: 579.3 bits (1492), Expect = 2.6e-165
Identity = 300/447 (67.11%), Postives = 346/447 (77.40%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKNNEQSA---SQSRDERSRSTWAQVVTGEEDADRDGGDRGHD 60
           M+GLI+GL+DVAIG +  +  +        SRDERSRSTWA VV+GEE+     G   H 
Sbjct: 1   MDGLIRGLVDVAIGGNQRRGGDDGGDDEGNSRDERSRSTWANVVSGEEEDQNRAGGSSHG 60

Query: 61  RRHGNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQG--EYGSEHGYNRDQWAKK---ES 120
           RR  ++ N             +WE +G R+  +  Q   E   E+ Y      K+   ES
Sbjct: 61  RRQNSEEN-------------QWEKKGERLPTRHSQSHEEDQEENTYAAKVSEKQDFSES 120

Query: 121 SEENNDGWETVHKKAP-RKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADF 180
            +E NDGWETV KK P R+ HKVQ E W+ YKRPASEQ+YSDEVE    LEPS+ EL+  
Sbjct: 121 QQEENDGWETVGKKKPARQSHKVQKEQWQDYKRPASEQHYSDEVETYGNLEPSQLELSGL 180

Query: 181 ARACNKLWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFC 240
           + ACNKLWELDLNRLVPG+DY+IDCG+GKRVH R DMA+  LFSWVSE+V RKPTF+RFC
Sbjct: 181 SEACNKLWELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEEVSRKPTFARFC 240

Query: 241 SLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRM 300
           SLLDNYNP++G KEVVT EE+QEQAAFIEEISRT+ IKYLH+YL  K V    Y +FKRM
Sbjct: 241 SLLDNYNPNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDVAPGSYLEFKRM 300

Query: 301 LTSLWFDLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGY 360
           LTSLWFDLYGRGGTS SSSAFEHVFVGEIKQ GG++VSGFHNWLQFYLEEAKG+VDYQGY
Sbjct: 301 LTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLEEAKGTVDYQGY 360

Query: 361 IFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVE 420
           IFPRRRG+ PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYT+CFF+G EDNH++
Sbjct: 361 IFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTEDNHIQ 420

Query: 421 LGPYPVNIKCYRLG-NKIGSVFPVAES 438
           LGPY VN+KCYRLG N+IGS FP+AES
Sbjct: 421 LGPYNVNVKCYRLGNNRIGSAFPIAES 434

BLAST of CmoCh06G008530 vs. TAIR 10
Match: AT4G17100.2 (EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). )

HSP 1 Score: 541.6 bits (1394), Expect = 5.9e-154
Identity = 288/451 (63.86%), Postives = 336/451 (74.50%), Query Frame = 0

Query: 1   MEGLIKGLIDVAIGHDDDKNNEQSASQSRDERSRST-------WAQVVTGEEDADRDGGD 60
           M+GLI+GL+D +    ++ N          + +R T          VV+GEE+     G 
Sbjct: 1   MDGLIRGLVD-STWLSEETNAAAETMVVMMKATRGTRDPDLLGLMFVVSGEEEDQNRAGG 60

Query: 61  RGHDRRHGNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQG--EYGSEHGYNRDQWAKK- 120
             H RR  ++ N             +WE +G R+  +  Q   E   E+ Y      K+ 
Sbjct: 61  SSHGRRQNSEEN-------------QWEKKGERLPTRHSQSHEEDQEENTYAAKVSEKQD 120

Query: 121 --ESSEENNDGWETVHKKAP-RKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDE 180
             ES +E NDGWETV KK P R+ HKVQ E W+ YKRPASEQ+YSDEVE    LEPS+ E
Sbjct: 121 FSESQQEENDGWETVGKKKPARQSHKVQKEQWQDYKRPASEQHYSDEVETYGNLEPSQLE 180

Query: 181 LADFARACNKLWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTF 240
           L+  + ACNKLWELDLNRLVPG+DY+IDCG+GKRVH R DMA+  LFSWVSE+V RKPTF
Sbjct: 181 LSGLSEACNKLWELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEEVSRKPTF 240

Query: 241 SRFCSLLDNYNPDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQD 300
           +RFCSLLDNYNP++G KEVVT EE+QEQAAFIEEISRT+ IKYLH+YL  K V    Y +
Sbjct: 241 ARFCSLLDNYNPNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDVAPGSYLE 300

Query: 301 FKRMLTSLWFDLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVD 360
           FKRMLTSLWFDLYGRGGTS SSSAFEHVFVGEIKQ GG++VSGFHNWLQFYLEEAKG+VD
Sbjct: 301 FKRMLTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLEEAKGTVD 360

Query: 361 YQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGED 420
           YQGYIFPRRRG+ PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYT+CFF+G ED
Sbjct: 361 YQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTED 420

Query: 421 NHVELGPYPVNIKCYRLG-NKIGSVFPVAES 438
           NH++LGPY VN+KCYRLG N+IGS FP+AES
Sbjct: 421 NHIQLGPYNVNVKCYRLGNNRIGSAFPIAES 437

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q503V96.5e-5744.91Poly(U)-specific endoribonuclease-B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1[more]
B1WBB44.8e-5241.45Poly(U)-specific endoribonuclease-B OS=Xenopus laevis OX=8355 GN=endou-b PE=2 SV... [more]
Q8JFY91.1e-5141.67Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV... [more]
B1H3D52.4e-5140.94Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV... [more]
Q1LUM36.1e-4740.96Poly(U)-specific endoribonuclease-C OS=Danio rerio OX=7955 GN=endouc PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1F7L93.5e-255100.00poly(U)-specific endoribonuclease-B-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1L2401.0e-24696.82poly(U)-specific endoribonuclease-B-like OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1DMN36.7e-21484.44poly(U)-specific endoribonuclease-B-like OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A0A0L6P18.8e-21486.01XendoU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017000 PE=3... [more]
A0A1S3BLB73.1e-21185.32poly(U)-specific endoribonuclease-B OS=Cucumis melo OX=3656 GN=LOC103490825 PE=3... [more]
Match NameE-valueIdentityDescription
AT4G17100.12.6e-16567.11CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998); Has 94... [more]
AT4G17100.25.9e-15463.86EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018998EndoU ribonuclease, C-terminalPFAMPF09412XendoUcoord: 170..433
e-value: 8.3E-99
score: 330.1
IPR018998EndoU ribonuclease, C-terminalCDDcd21159XendoUcoord: 167..433
e-value: 1.2605E-126
score: 365.33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..29
NoneNo IPR availablePANTHERPTHR12439:SF34SUBFAMILY NOT NAMEDcoord: 107..436
IPR039787Poly(U)-specific endoribonucleasePANTHERPTHR12439PLACENTAL PROTEIN 11-RELATEDcoord: 107..436
IPR037227Endoribonuclease EndoU-likeSUPERFAMILY142877EndoU-likecoord: 170..435

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G008530.1CmoCh06G008530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function GO:0004521 endoribonuclease activity
molecular_function GO:0008168 methyltransferase activity