CmoCh06G008430 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCACTAGGTTGCCCATTGGAGTTCTAAACATGCATATTCTAACCACTCAAGGTATGATATGTCCTAACATCTCCCCTCTTCCTAACATCTCCGCCCTTCATAGGCTTGGGCAATCAATTTTCCAAAATCGATCCGGTTCTTGATTTCTTCCTATTTAATTTTGCTATTATATAGCATTACATAATCAATGACTAAATCACTTAATCAAATCTAATTCAAATAATTAAATCAAATTTAATCAAAATAACTAAATCAAATCTAATCTAATAACAACTTATCAAAATATGGGAACCAAAACTCTCGAATTTAAAAGAAAAATCGGAGGTATTTTTTATAATGTTTAAAAAATGAAGTTTAGATGTATTTTTTTTTATAATTTAGTCGATAATAAGAAGGTTGGCCTATGTTTTGATCGAGTGAATTAGGGTTTTGTAAACTAAAAGGGCAAGATTGTCTTTTCACTATCCTAAAGGGTTTGCCGCATTTGCCTTATTTATTTACAATCTCCCAAGCCCTTCCGTTCATATCAGTTTACTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCGAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTTGCACAAAACGCAGGTTCATCTGACTCTCTCTGCCTTTCAATCTCTCAATTTCGTTTTTTCCCTCTCTCGCTGTTTTTCGATTTCTTCTGAATTCATACGGAGGACTTCTTTTTCTTTGCAGATAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTTGGTAACTTTATTGTTGATTTTCTTCGTTTTAGCATATATTGAATGATAGGTATTAGTAAGATTATTTGTTTATTAACTAATTTTTTCCTTGAATCAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGGTACATACTTTTAAATTCAGCTGTTTGTTTGTGTTGAAGATGGTTGGGAGGGAGTCCACATTGGCTAATTTAGGCTAATTTAGGGAATGATCATGAATTTGTAGGTAAGGAATACATCTCCATTGGTATAAGGCCTTTTGGGGAAGCCCAAAGGCTCAAAGTGGACAATATCATACCATTGTGTAGAGTCGTTATTCCTAACCGTTTGAAACCTGGACACGAGCTTAGCATTTTTAGTGCATTGACTTTTAGCAGGCTAAATGCAGACATGGATATGTTGTTCTCTGTCAAGAAAAAGGTGTCCTGGAAATTTAGCATCCACCCATTAAATCATTGTTTCAATTGTCTTCCCAAGTTTGTGTTTAATTTCCTCTAGATTGTAAAGTTTATGAAAGATTAGGTTAGTCAAAGAGTACAATTTTTTATCAAGAATCCTCTTCCCAAAAGATGGTTATGAAATTTATCGTAAAAATAAGAACTGTGCTTGTTGCAAGATCTATGGATGTACATCTATGCCTGATGGATGGATAGGAAGTACTCACTAGTTGGTACCCAATCTTGGTTGTCTCGTAGGCTGGAAATATATTGATCTTTCTATTGCAAAAATTGTTTGCTTTTGCAAGCGAGTTGCACATTTAAAACAATGTAGCAGTATAGTGTAGTTGGATGTAACATAGAGTGGTTGGAGAATTACCGACTATGTAACATTGTCGCATTGTTACTAAATATTTCTAACTTGTAGCATTATTATGAGATGAAATGTAGAGATTGTTTGTAGCACTGTTCTAACAATTTAACACAATGCACTTTAGCTGGGAACTTACCTCCCCATTTTATGTCGTTTGAAGTAGACAAATTCCTTCCTAACTACTACATTTAGAACATAGAACATTTCTTTATTGTATTTGAATATGTTACAGTGCTTGTTCCTTCTTTGGAGTTGCAAACATTGCTCACTTCCTTCCCTTGTTGCAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCAGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGTTTGCACGTTGACCAATTACCCCCTAAATTTGAATCTAAACACAAACAACTTTCATAGTTCTTGACCTATACATTCTTGTTAATTGTCATAGGACGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGTAAGCCACTCTTCCTTGTATCCTTGGAATGTACGTGGTTGTGGATGTGGGAGCTTGGTTTTTCATCATTTAATGTCATAATTTGATTTAAACAGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTGCATTGAATTGTAGTAGTAGTAGTAGTGGTGAATCAGAGTCTGAAGAGAGTAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAACCAGAATACTGACCGTGGGAATCGATTGTCAGTTAAACTCAAAAGATTGAAGTCTAGAAAAACCAATTGTAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAATAAGCGACCAAAGATTCTAGAGCTTTCTTGAGAGCCATCTTTTGATTGCATCTAATTCGATAATATGGATGTGTCACTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACATAATCTTCAAGGTTGATTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCATTTAGTTCATGTGCTTTCTTGGAAGGGAAGGCGTTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGGAATTATTCTTGATCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCTTCTTTCTTTCACCAGTTCTTTTATGTTGTCATGCTTTCTAAGGAGAAATTCACTGG ATGTTCACTAGGTTGCCCATTGGAGTTCTAAACATGCATATTCTAACCACTCAAGTTTACTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCGAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTTGCACAAAACGCAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTTGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCAGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGACGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTGCATTGAATTGTAGTAGTAGTAGTAGTGGTGAATCAGAGTCTGAAGAGAGTAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAACCAGAATACTGACCGTGGGAATCGATTGTCAGTTAAACTCAAAAGATTGAAGTCTAGAAAAACCAATTGTAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAATAAGCGACCAAAGATTCTAGAGCTTTCTTGAGAGCCATCTTTTGATTGCATCTAATTCGATAATATGGATGTGTCACTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACATAATCTTCAAGGTTGATTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCATTTAGTTCATGTGCTTTCTTGGAAGGGAAGGCGTTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGGAATTATTCTTGATCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCTTCTTTCTTTCACCAGTTCTTTTATGTTGTCATGCTTTCTAAGGAGAAATTCACTGG ATGTTCACTAGGTTGCCCATTGGAGTTCTAAACATGCATATTCTAACCACTCAAGTTTACTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCGAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTTGCACAAAACGCAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTTGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCAGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGACGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTGCATTGAATTGTAGTAGTAGTAGTAGTGGTGAATCAGAGTCTGAAGAGAGTAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAACCAGAATACTGACCGTGGGAATCGATTGTCAGTTAAACTCAAAAGATTGAAGTCTAGAAAAACCAATTGTAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAATAAGCGACCAAAGATTCTAGAGCTTTCTTGA MFTRLPIGVLNMHILTTQVYSPKPISRLYLSLSPVGIAVYRRRLLSFPHSRREELPAAASGRCPPFAVCSVAISFLHKTQKTRKMRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIGNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKSRKTNCRSESKEKGKSNKRPKILELS Homology
BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.8e-98 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.8e-91 Identity = 195/206 (94.66%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 5.3e-74 Identity = 167/205 (81.46%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 5.3e-74 Identity = 167/205 (81.46%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 3.4e-73 Identity = 167/205 (81.46%), Postives = 182/205 (88.78%), Query Frame = 0
BLAST of CmoCh06G008430 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23 Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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