CmoCh06G008430 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G008430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionE3 ubiquitin-protein ligase RNF34
LocationCmo_Chr06: 4690188 .. 4693321 (-)
RNA-Seq ExpressionCmoCh06G008430
SyntenyCmoCh06G008430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCACTAGGTTGCCCATTGGAGTTCTAAACATGCATATTCTAACCACTCAAGGTATGATATGTCCTAACATCTCCCCTCTTCCTAACATCTCCGCCCTTCATAGGCTTGGGCAATCAATTTTCCAAAATCGATCCGGTTCTTGATTTCTTCCTATTTAATTTTGCTATTATATAGCATTACATAATCAATGACTAAATCACTTAATCAAATCTAATTCAAATAATTAAATCAAATTTAATCAAAATAACTAAATCAAATCTAATCTAATAACAACTTATCAAAATATGGGAACCAAAACTCTCGAATTTAAAAGAAAAATCGGAGGTATTTTTTATAATGTTTAAAAAATGAAGTTTAGATGTATTTTTTTTTATAATTTAGTCGATAATAAGAAGGTTGGCCTATGTTTTGATCGAGTGAATTAGGGTTTTGTAAACTAAAAGGGCAAGATTGTCTTTTCACTATCCTAAAGGGTTTGCCGCATTTGCCTTATTTATTTACAATCTCCCAAGCCCTTCCGTTCATATCAGTTTACTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCGAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTTGCACAAAACGCAGGTTCATCTGACTCTCTCTGCCTTTCAATCTCTCAATTTCGTTTTTTCCCTCTCTCGCTGTTTTTCGATTTCTTCTGAATTCATACGGAGGACTTCTTTTTCTTTGCAGATAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTTGGTAACTTTATTGTTGATTTTCTTCGTTTTAGCATATATTGAATGATAGGTATTAGTAAGATTATTTGTTTATTAACTAATTTTTTCCTTGAATCAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGGTACATACTTTTAAATTCAGCTGTTTGTTTGTGTTGAAGATGGTTGGGAGGGAGTCCACATTGGCTAATTTAGGCTAATTTAGGGAATGATCATGAATTTGTAGGTAAGGAATACATCTCCATTGGTATAAGGCCTTTTGGGGAAGCCCAAAGGCTCAAAGTGGACAATATCATACCATTGTGTAGAGTCGTTATTCCTAACCGTTTGAAACCTGGACACGAGCTTAGCATTTTTAGTGCATTGACTTTTAGCAGGCTAAATGCAGACATGGATATGTTGTTCTCTGTCAAGAAAAAGGTGTCCTGGAAATTTAGCATCCACCCATTAAATCATTGTTTCAATTGTCTTCCCAAGTTTGTGTTTAATTTCCTCTAGATTGTAAAGTTTATGAAAGATTAGGTTAGTCAAAGAGTACAATTTTTTATCAAGAATCCTCTTCCCAAAAGATGGTTATGAAATTTATCGTAAAAATAAGAACTGTGCTTGTTGCAAGATCTATGGATGTACATCTATGCCTGATGGATGGATAGGAAGTACTCACTAGTTGGTACCCAATCTTGGTTGTCTCGTAGGCTGGAAATATATTGATCTTTCTATTGCAAAAATTGTTTGCTTTTGCAAGCGAGTTGCACATTTAAAACAATGTAGCAGTATAGTGTAGTTGGATGTAACATAGAGTGGTTGGAGAATTACCGACTATGTAACATTGTCGCATTGTTACTAAATATTTCTAACTTGTAGCATTATTATGAGATGAAATGTAGAGATTGTTTGTAGCACTGTTCTAACAATTTAACACAATGCACTTTAGCTGGGAACTTACCTCCCCATTTTATGTCGTTTGAAGTAGACAAATTCCTTCCTAACTACTACATTTAGAACATAGAACATTTCTTTATTGTATTTGAATATGTTACAGTGCTTGTTCCTTCTTTGGAGTTGCAAACATTGCTCACTTCCTTCCCTTGTTGCAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCAGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGTTTGCACGTTGACCAATTACCCCCTAAATTTGAATCTAAACACAAACAACTTTCATAGTTCTTGACCTATACATTCTTGTTAATTGTCATAGGACGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGTAAGCCACTCTTCCTTGTATCCTTGGAATGTACGTGGTTGTGGATGTGGGAGCTTGGTTTTTCATCATTTAATGTCATAATTTGATTTAAACAGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTGCATTGAATTGTAGTAGTAGTAGTAGTGGTGAATCAGAGTCTGAAGAGAGTAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAACCAGAATACTGACCGTGGGAATCGATTGTCAGTTAAACTCAAAAGATTGAAGTCTAGAAAAACCAATTGTAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAATAAGCGACCAAAGATTCTAGAGCTTTCTTGAGAGCCATCTTTTGATTGCATCTAATTCGATAATATGGATGTGTCACTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACATAATCTTCAAGGTTGATTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCATTTAGTTCATGTGCTTTCTTGGAAGGGAAGGCGTTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGGAATTATTCTTGATCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCTTCTTTCTTTCACCAGTTCTTTTATGTTGTCATGCTTTCTAAGGAGAAATTCACTGG

mRNA sequence

ATGTTCACTAGGTTGCCCATTGGAGTTCTAAACATGCATATTCTAACCACTCAAGTTTACTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCGAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTTGCACAAAACGCAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTTGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCAGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGACGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTGCATTGAATTGTAGTAGTAGTAGTAGTGGTGAATCAGAGTCTGAAGAGAGTAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAACCAGAATACTGACCGTGGGAATCGATTGTCAGTTAAACTCAAAAGATTGAAGTCTAGAAAAACCAATTGTAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAATAAGCGACCAAAGATTCTAGAGCTTTCTTGAGAGCCATCTTTTGATTGCATCTAATTCGATAATATGGATGTGTCACTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACATAATCTTCAAGGTTGATTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCATTTAGTTCATGTGCTTTCTTGGAAGGGAAGGCGTTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGGAATTATTCTTGATCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCTTCTTTCTTTCACCAGTTCTTTTATGTTGTCATGCTTTCTAAGGAGAAATTCACTGG

Coding sequence (CDS)

ATGTTCACTAGGTTGCCCATTGGAGTTCTAAACATGCATATTCTAACCACTCAAGTTTACTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCGAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTTGCACAAAACGCAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTTGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCAGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGACGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTGCATTGAATTGTAGTAGTAGTAGTAGTGGTGAATCAGAGTCTGAAGAGAGTAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAACCAGAATACTGACCGTGGGAATCGATTGTCAGTTAAACTCAAAAGATTGAAGTCTAGAAAAACCAATTGTAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAATAAGCGACCAAAGATTCTAGAGCTTTCTTGA

Protein sequence

MFTRLPIGVLNMHILTTQVYSPKPISRLYLSLSPVGIAVYRRRLLSFPHSRREELPAAASGRCPPFAVCSVAISFLHKTQKTRKMRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIGNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKSRKTNCRSESKEKGKSNKRPKILELS
Homology
BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.8e-98
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0

Query: 85  MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 144
           MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 145 LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 204
           LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 205 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 264
           GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS
Sbjct: 121 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 180

Query: 265 RKTNCRSESKEKGKSNKRPKILELS 290
           RKTNCRSESKEKGKSNKRPKILELS
Sbjct: 181 RKTNCRSESKEKGKSNKRPKILELS 205

BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.8e-91
Identity = 195/206 (94.66%), Postives = 199/206 (96.60%), Query Frame = 0

Query: 85  MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 144
           MRHASKDLLCLERKDLPSSS ESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 145 LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 204
           LGVLSEANKKLQLDAKDDAEKYDIEALNG+ESEVIELDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 205 GNQPVIALNC-SSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLK 264
           GNQPVI LNC SSSSS ESESEESSDDSITSDNND+DNEKSD QNTDRGNRLSVKLKR K
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 265 SRKTNCRSESKEKGKSNKRPKILELS 290
           SR+ NCRSES+EKGKSNKRPKILELS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 5.3e-74
Identity = 167/205 (81.46%), Postives = 185/205 (90.24%), Query Frame = 0

Query: 85  MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 144
           MRHASKDLL LERKDL +SS ESSLLVCKKNSTSKEPCRNEKPITEPA KS VLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 145 LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 204
           LGV+SEANKKLQ+D+K++A+KYDIEAL+G+ESEVI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 205 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 264
           GN PVI L CSSS   ESESEESSDDSITSD++++DNEKSD+QNTD  NRLSVKLKR  S
Sbjct: 121 GNHPVIPLTCSSS---ESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNS 180

Query: 265 RKTNCRSESKEKGKSNKRPKILELS 290
           RK +CRS+SK KGKS KRPKI  LS
Sbjct: 181 RKASCRSKSKGKGKSKKRPKIQVLS 202

BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 5.3e-74
Identity = 167/205 (81.46%), Postives = 185/205 (90.24%), Query Frame = 0

Query: 85  MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 144
           MRHASKDLL LERKDL +SS ESSLLVCKKNSTSKEPCRNEKPITEPA KS VLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 145 LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 204
           LGV+SEANKKLQ+D+K++A+KYDIEAL+G+ESEVI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 205 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 264
           GN PVI L CSSS   ESESEESSDDSITSD++++DNEKSD+QNTD  NRLSVKLKR  S
Sbjct: 121 GNHPVIPLTCSSS---ESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNS 180

Query: 265 RKTNCRSESKEKGKSNKRPKILELS 290
           RK +CRS+SK KGKS KRPKI  LS
Sbjct: 181 RKASCRSKSKGKGKSKKRPKIQVLS 202

BLAST of CmoCh06G008430 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 3.4e-73
Identity = 167/205 (81.46%), Postives = 182/205 (88.78%), Query Frame = 0

Query: 85  MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 144
           MRH SKDLL LERKDL SSS ESSLLVCKKNSTSK+P RNEKPITEPA KS VLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 145 LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 204
           LGV+SEANKKLQ+D+K++AEKYDIEAL+G+ESEVI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 205 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 264
           GN PVI L CSSS   ESESEESSDDSITSD+++DDNEKSD+Q TD  NRLSVKLKR  S
Sbjct: 121 GNHPVIPLTCSSS---ESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNS 180

Query: 265 RKTNCRSESKEKGKSNKRPKILELS 290
           RKT+CRS+SK KGKS KRPKI  LS
Sbjct: 181 RKTSCRSKSKGKGKSKKRPKIQVLS 202

BLAST of CmoCh06G008430 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23
Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 0

Query: 90  KDLLCLERKDLPSSS-FESSLLVC---KKNSTSKEPCRNEKPITEPAPKSQVLGRVKDFL 149
           KDLL LE K+  SSS  +S+LL+C    K     E     KP   P PKSQ+LG++K FL
Sbjct: 8   KDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEAPPPSKPTIAPVPKSQLLGKLKGFL 67

Query: 150 GVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIG 209
           GV++EANKK    ++ + E Y+IEAL G+ESE+IE+DLMLG+ADL+TPEAV+AAE+AI G
Sbjct: 68  GVMAEANKK----SEANPEAYNIEALTGNESELIEMDLMLGVADLNTPEAVSAAEAAIAG 127

Query: 210 NQPVIALNCSSSSSGESESEESSDDSITSD 236
             P  A +  SSS  ES+SE   ++S +++
Sbjct: 128 IGPA-AESGDSSSDDESDSESEGEESKSAE 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F9131.8e-98100.00uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KZJ82.8e-9194.66uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A5D3CJH55.3e-7481.46E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BJW45.3e-7481.46uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=... [more]
A0A0A0L4483.4e-7381.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G71430.11.1e-2350.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027921NOP protein chaperone 1PFAMPF15370DUF4598coord: 138..287
e-value: 1.6E-14
score: 54.3
IPR027921NOP protein chaperone 1PANTHERPTHR28674SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSEDcoord: 86..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..257

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G008430.1CmoCh06G008430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000492 box C/D snoRNP assembly
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0062064 box C/D snoRNP complex binding