CmoCh06G008370 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACAACTCCAAGGTTGAGGAGAGGCGCACTGTACTCTGTTCTGCGTCACAATGTCTTCTTCCATGGCTTTGTTTTCTCCTCCTTTCCATCTTTCCACTCTCTCTTCTTCATTATGCCACAGAAATTCCTTCTCCTCCATACCTTTTTCTTCTCTCAGAACCAGAAGAAGCCCTTCTTCTTCCTCTCTTTTCACCATCAGAGCCGCTGCGGAACCGGAGCCGGCTAAGTCCGTAACGGAAGAGCAGGAGAGCCTCCCCGGAACAAATGGCGCGATGGCGGCTGCTGAAGAAGTGGAGGTCGTTACCAAATTTGAAGACGCTAAGTGGATTAATGGAACTTGGGATCTGAATCAGTTCCGGAAACACGGAAGTATCGACTGGGATTCTGTTATTGATTCCGGTAATCTCAATCTTCTTTGGATCTGAGAAAATGAGAAATTAAGCAACTCTTCCTTAAGAACCTAGATTCTCTGTTGATTTTGATTTCAATTGAATAACTGAAATTAGGTTCAAATTGTGGTGTAATCTCTTGATTTTGGAATTGAGTTTTTCGATCAGAGGCTAGGAGGAGAAAATGGGTGGAAAAAAATCGAGAATCATCAAGTAATGAGGATCCCGTGGTGTTTGGGACATCCATAATTCCATGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAAGCTGAGACACTCAATGGTATAAACACACGTTTAATACATACGTTGTTCTTTGTTGATAGCGATTTGAACATGAATATGAATATGGTATCATGATGTGATGGGTTTTGGGCGCAGGGCGTGCAGCGATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGAGTGGGGTAGGGGTAGTGGGTCAAATGGGCAACTTCTTCTGCAAAACTCTGCTGTTTGTGGCTGTGGTGGGAGTTGTTTTGATCAGAGAGAATGAAGATATTGAGACTTTGAAGAAGTTGATTGATGAGACAAGCTTGTATGACAAGCAATGGCGAGCAACTTGGGAGGATTAAGCTGAAGAAGTTGATTATCTATATCTATAATTTCGCTTTAGATTCCTTTGTTTGTAGCTCGAAATCGAACACTTTTCTTATAGCCCAAGAAAACCCAAGTTTTTAGTCCAATTTCCATTTCCAAACAACAAAACAAACCAAATGGGGACACACAAAAGGGTTTTGCTTAGCTTTTTGGTAATGATTCACACTTGTTATTTCTAAGAAGTTGTTCACAAAACTTTCTATTTTGTATTTTTTTTTTTTTTTGTCGAAGTTCTTTATTATGGTAAATAAATAACTAGGATATGACGTGTATAATTCACTTAACAAGCATCCGGTACATGTCCATAAATAACTAGGAAGGTGTATTAAAGGATTTGATTTGCATTTGATAAATTGATGCGAGTTGAGGGTCTCATCGTCTTGTCCCGGTGGATTGAAACTCAGAAAGCCGAAAGTTTGCCTACAATCTTCTTTGACAAACACTAGCTACTGTTTCATATGCAAAAAGGTCATTCAAGCTTATTTATTTATTTGTTGTTTTTTATTTGTGCTTCGAAAGACATGATCCGGATGAAATTTGAGAATTTGAATTTGGATAATGTTTGAAACTTAGAGATGAAAATTATCTTCTAGATTCTCAACTTCAAAGGCTAAAATTGATGATGTAGTACATCAATTTTCAACTCATAATGTCTTGAAACGATTTATAAGTGCTTTTAAAGAAAAAGAAAATAAAATACCGAAAGAAAAGTATAATCAATGTTGTTTTTTCGACTAGAATCACTCATTTTGAAATTACATGTAATGATGTTAGAAAAGATGTATAATGTGTTTTTGAAATTATTATTATTATTATTATAAATCAGTAAATAAGAAGAAAAAAATAAAATAAAAACAAAAAAGAAGAAGACGACAAGCTACCATGGAGAAGGGATGGAGAACGGAGGAATGGACAGGAGGATTGAAGGGGGAAAAGAAAGGATGGAGGTGTGTGTGGGAGAAATTGTGTTGAAATATCCTATTACGCGTACACCCAAGGGAAAAGGAGTTCGAAACTAGGTAAGTAGCATATCGAGAATCTTAAACTGAGTTCTTAACTTGTTTTGCAACATATAATCATATTTTTTTACCTTTTAAAAGCTTAAAAATAACAATATGTGCTTCCATGTTATCAAATGCCTATTTGTATATTGACTGCTTGTCCGAGGTAAGTATTGGATCAGTATGACAATAATAATTTTAAAATTAAATAGTAAGAGTTAGAAAATATGTCATTGTAGTTTTATAATGGTTCGGTCAAACTCGACCTACTCCACTCCACAAGCGCCTCTTGAGAATTTAAATAAAAAACTTTCTCGACTCTTTTCACGGATTAGAGCCCAACCACTCCACCACTCTTTTTACGAGTCCAAGAGCAAACTCGATATTTTCCACGACGCAGGATCAAATTGATACAAGTATTTGAATTTAGAATTTAGAATACTCACAATTATTTTCTTACAATAAAATAAAAAAATCTCATAAATAAAAATAAAATTGGAAGTTTGAAGAAAGCAACGGGGAGGCTTTAGAAAATTGAAAGACGGAAGAATTATGGAAGTTGTGTTATTGAAAATAGGGAGAAGTTGATGAGTTTAAATAGAGAACGAACAGTGGAAAAAAAAAATAAAAATAAAAAATAATATTGACGGTTAAAAGAGGAATGGAAGGTGGAAATTAAAAAGTAAATAATAACAAAATTTTCTCAATTTATTTTTATTATATATTTTTAAATATAAATAATAATAATAATATAATATAAAATAATAAAAATAGATGTGAATAACCGTCAAATGACAAATTCAAAATTTATTATAAATATAATAATATAATAATAATAAAAATGACGTGAGTAACCACTCAAATTTTAAAATATAATAATATAATAATATAATATAGTAATAATAAAAATCGATGTAAATAACGGTTAGATTTAAATTTATATTATATATAAATAATTTTATTTAGAAATATAATAATAAGAAAAACTCCACACTTTGTCACTATTCCAAAATGATAAGTGTCATCGTATTATTTGATTTGTCCTCATTTTGATTTAGCTGCCACATCATCATGTCGAATATGTTATATCGATTGTAATTTCTTCGTTTTGGCTATGATTTGAGTGATTGAAAAGTCGTTGAAGTCCTTATTCCTAACATACTCTGGACCGTTTAAAATACTGAAAATAGTTAATAATTAAAAGTAGGTGTGTTATCATCCGAACATCAATCAATTAATTATTTAAAATTAATTAATATGAGATTAAGGGCCAAAAAACTAATAGTAAGCATGTTATAAATGATTACTAGAATGTTCTATATGTTGAACATTATAAATGTATGAAAGCATGCATTATAGATGTGAGTATGTTGTGCATGTTAATGGAAAGGTTATAACTCTAGGATATGCTTATAAATTGCTGAGTCATGAGTTATGTATATGAGTATTGTAGTCTACTAATTCCCACAGAGTTCTTGACCAACGCGCTGTGTGCTAAGTCGGGAAAAATGAATACTCCTGACTATTAGTATATGCTAAATCAGGAAGAATGAGTACTCCTAACTATTGGTATACAAGTCACCAAAAAAATTAGTAGACGGGCCGTATTTGACTAAGAGTGAATCTTACAAACGAGTCCGAAAACTTTAGATAAGCGTATAGAGAGCCAATAACCTAAGCTGGAGGTAGCTGAAATACCTCATTAATAAATAGACGACCCTATTAAGAGAAACTAGAAGTTAATGGCGAATAAAACTTAAAAACAGCCGGAAAGATAAGTGATAAAGACTAGGAAAGATAAGTGATGCATGCCAATTGAGGACGAGACCAGCAGGCTAACGGAATCCATGTCTGGGTTTGTTTGTGTATTTATGCTTTCGCTGTTTAAAATTTACATGGGTTGTTGTTTTAAGTTTCAATAGTACTGGTTTTAAATATTTTACTTAATGTATATGGAAATATTTTGAAATTTATGATTGATTGTCGGCTCCTTCCTGATTTGATTGTATTGGTTTAGTTGCAGCTTTTCCTATTAATTTGTCAAATCAGGGAATACAGGGTCAGGGCAGAGAGAGGCAGGTTCAGTAGTTAAGGTAAGGAGAAATCATCGGAAGCACAAAGGGTCTAGTAGGGGATAAGCAGCTAGATAAGTAAGCAATATCAGTTTGTTATTGATATCAGTGGTAACTCCTCTTAATTGCATTATCAATAAGCAGGTGTTATAGTACGCTCCAACACTAGCTTTGAATTTCGTCACTTCTTCCGTCCTTTACATCTTTTGTGGAGAGATATCTTGTCACAATCGTAATTTTCTTGGCAATTTATCGTGTGGCTGTACCTACGAACAGGCAAGACTCAAGTTTTTGACCCTATTTTGAAAATAAGGTTTTAAAATACAGTGGCAGAGAAATTTTCTAAAACGAGTTTGAAAGTACGAACGAAAGATGATTTGAAAGTAACGTTATATAACTATAAGCAAAATACAACAACACGACTTAAATAACATACAACTTTTTGAGTAGGAAGAATTTGACAACTAGTCACATCCCCCTAACTTTTTCATTCAATTCAGTCATTCAATCTTTCGGGAATGGGAAACAATATTTCTTCCTCTATCAAGATCAATTGGTTGGCTTCTTGATTTAGGTGTTGATTTTTTCGTCAACCAGTCTCAATGCATGAAGAAACTAACGAACGATTAAGAAAAGCAAATTGAAGTTGAAGAATGCAAGATAATATTACAATTTACCATCTTATGTACATCACCTTGTATGTATCACCCCAAAATATTGTATATTATCACTTTGTACACACTAAGTGATACTTACAAAGTGATAGGTGATACATACAAGGTGATATATATACAATTTTGTGACGAAGAGATCATTGATTATAAGAAAGCATCTACTAAATACACGATCATACGATCACAGTTTGTAGTCCTATTAAACACAAAATCCAATTTTACGACTAATAAAATAAGTAATGTTTAAGATTTTTTAGTACTTCAAACACCTATCGGACACTTTCAAAGCTCTAGAATACTTCATAATCCCATCTCCGTCAAGCTCAAACTCTCTACCTGTCAACTTGTCAACTGAAATGGTGAATTCTCTCTTATCTCTATTACTCTGCAACTCAAGGTTTGTGTCCTGACATGTGGTGTGGTGATGTTTGTGAATTTTAGGCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGATTCCAACGTGATGATGGTGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTTCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCCGATTTCTGTGACGAACAAGCAACCGATCCAAAGAAACGTGGCGATTAATCCTGTATGTATGCTCTTCCTTATTTTTAGAACTCAAGAATTCCCGTTCAAGCAACCTAGTGGCATATTGTAGGAACAACGATCCTCCACAGTGACATGATACTGCCCACTTTGAGTATAAGCTCTCGGGGGTTTTACTTTTGGTTTTTTCAAAAGATCTCAAACCAATGAAGATAATATCCCTTACTTATATACCATGATATTTCCCTTTATTAGCTAATGCGAGACTCAAACAATCTTAACTAATCCCCCCACGAACAAAGTACACCATTGAGCCTCACCTAACGACTCCTTTTCTTTGGAGCCCTTGAACAAAGTACAACATTGAGTCTCCCCTTAAACAGTTATCTATCTATCCAACACACTATTCTAGACGACTTCTCTTCACTAGAGCACATTGTTAGTCCAATAAAACTCTACCATGAATCTTCACCATGACTGCACTTTCGAGACTCGCAACTTCTTTGTTTGACACCTGAGTCACTGTGACTACACCTACAAGATTCAGAGCTTGTTTGTTCAACATTTGAGGATTCTAGTGACATAACTAAGTTAGGGTATAGCTCTAATACCACTTATAGGAACATCTACCCTTCACAATGACATAATAGAGAATCTATACAAATAGAGAGAGTGTCCCTTAATTATATACCCATGATCTTCCCCTTAATTAGCCAATGCGAGACTCCAACAATCCCAACAATCCTCAACACACACAACAATAATCTAACCCACCTAGTGAGAAAGTATGATAATCAATTTAGTTTTCTTCAACAATAATGTTACCCAACTGTACACCAAATTCATCTGAACAACTCAAATTTGAATAGACATATTGCAGTAATATTTGTTCAAGTGGTCAAGTTTTGGATGTGTAAGTATCTCCATGGTCATTCGACCATAATTTTAAGTCAGAAACATGACAACTTGAAATAGTTACCAGTGTTGTAATACTGTAGATGAGGAGATGATATCAAACCCAATCATTTCTCCTGTATATAACTTGTTTTGGAAGGATATAGCCTGGTATCTATACCATGTTTGTGACGAAGAATTAAAGTTTTCCTTTTTTGATAGCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCACAAGGCTTTGACGAGTTTTCAGGCAAAAAACAAGAGACAAAAGCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAAGATAATAAAAGAATTAGAAGGATAA AACAACTCCAAGGTTGAGGAGAGGCGCACTGTACTCTGTTCTGCGTCACAATGTCTTCTTCCATGGCTTTGTTTTCTCCTCCTTTCCATCTTTCCACTCTCTCTTCTTCATTATGCCACAGAAATTCCTTCTCCTCCATACCTTTTTCTTCTCTCAGAACCAGAAGAAGCCCTTCTTCTTCCTCTCTTTTCACCATCAGAGCCGCTGCGGAACCGGAGCCGGCTAAGTCCGTAACGGAAGAGCAGGAGAGCCTCCCCGGAACAAATGGCGCGATGGCGGCTGCTGAAGAAGTGGAGGTCGTTACCAAATTTGAAGACGCTAAGTGGATTAATGGAACTTGGGATCTGAATCAGTTCCGGAAACACGGAAGTATCGACTGGGATTCTGTTATTGATTCCGAGGCTAGGAGGAGAAAATGGGTGGAAAAAAATCGAGAATCATCAAGTAATGAGGATCCCGTGGTGTTTGGGACATCCATAATTCCATGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAAGCTGAGACACTCAATGGGCGTGCAGCGATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGAGTGGGGTAGGGGTAGTGGGTCAAATGGGCAACTTCTTCTGCAAAACTCTGCTGTTTGTGGCTGTGGTGGGAGTTGTTTTGATCAGAGAGAATGAAGATATTGAGACTTTGAAGAAGTTGATTGATGAGACAAGCTTCTCGAAATCGAACACTTTTCTTATAGCCCAAGAAAACCCAAAATCACTCATTTTGAAATTACATAATGTTCTATATGTTGAACATTATAAATGTATGAAAGCATGCATTATAGATGCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGATTCCAACGTGATGATGGTGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTTCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCCGATTTCTGTGACGAACAAGCAACCGATCCAAAGAAACGTGGCGATTAATCCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCACAAGGCTTTGACGAGTTTTCAGGCAAAAAACAAGAGACAAAAGCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAAGATAATAAAAGAATTAGAAGGATAA ATGTCTTCTTCCATGGCTTTGTTTTCTCCTCCTTTCCATCTTTCCACTCTCTCTTCTTCATTATGCCACAGAAATTCCTTCTCCTCCATACCTTTTTCTTCTCTCAGAACCAGAAGAAGCCCTTCTTCTTCCTCTCTTTTCACCATCAGAGCCGCTGCGGAACCGGAGCCGGCTAAGTCCGTAACGGAAGAGCAGGAGAGCCTCCCCGGAACAAATGGCGCGATGGCGGCTGCTGAAGAAGTGGAGGTCGTTACCAAATTTGAAGACGCTAAGTGGATTAATGGAACTTGGGATCTGAATCAGTTCCGGAAACACGGAAGTATCGACTGGGATTCTGTTATTGATTCCGAGGCTAGGAGGAGAAAATGGGTGGAAAAAAATCGAGAATCATCAAGTAATGAGGATCCCGTGGTGTTTGGGACATCCATAATTCCATGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAAGCTGAGACACTCAATGGGCGTGCAGCGATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGAGTGGGGTAGGGGTAGTGGGTCAAATGGGCAACTTCTTCTGCAAAACTCTGCTGTTTGTGGCTGTGGTGGGAGTTGTTTTGATCAGAGAGAATGAAGATATTGAGACTTTGAAGAAGTTGATTGATGAGACAAGCTTCTCGAAATCGAACACTTTTCTTATAGCCCAAGAAAACCCAAAATCACTCATTTTGAAATTACATAATGTTCTATATGTTGAACATTATAAATGTATGAAAGCATGCATTATAGATGCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGATTCCAACGTGATGATGGTGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTTCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCCGATTTCTGTGACGAACAAGCAACCGATCCAAAGAAACGTGGCGATTAATCCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCACAAGGCTTTGACGAGTTTTCAGGCAAAAAACAAGAGACAAAAGCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAAGATAATAAAAGAATTAGAAGGATAA MSSSMALFSPPFHLSTLSSSLCHRNSFSSIPFSSLRTRRSPSSSSLFTIRAAAEPEPAKSVTEEQESLPGTNGAMAAAEEVEVVTKFEDAKWINGTWDLNQFRKHGSIDWDSVIDSEARRRKWVEKNRESSSNEDPVVFGTSIIPWWAWIKRYHLPEAETLNGRAAMVGFFMAYFVDSLSGVGVVGQMGNFFCKTLLFVAVVGVVLIRENEDIETLKKLIDETSFSKSNTFLIAQENPKSLILKLHNVLYVEHYKCMKACIIDAKVSRENKVLVSVYTERQEPRVAVNRFQRDDGVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPEPISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGNLIQRSHKALTSFQAKNKRQKQNQSSGSTKNAKIIKELEG Homology
BLAST of CmoCh06G008370 vs. ExPASy Swiss-Prot
Match: Q9SYX1 (Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.1 PE=1 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 9.0e-64 Identity = 136/239 (56.90%), Postives = 167/239 (69.87%), Query Frame = 0
BLAST of CmoCh06G008370 vs. ExPASy Swiss-Prot
Match: Q6NKS4 (Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.2 PE=1 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 9.0e-64 Identity = 138/241 (57.26%), Postives = 164/241 (68.05%), Query Frame = 0
BLAST of CmoCh06G008370 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 2.5e-125 Identity = 255/376 (67.82%), Postives = 289/376 (76.86%), Query Frame = 0
BLAST of CmoCh06G008370 vs. ExPASy TrEMBL
Match: A0A6J1F3X0 (light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441881 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 1.2e-119 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CmoCh06G008370 vs. ExPASy TrEMBL
Match: A0A6J1KTD1 (light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498485 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 4.9e-113 Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0
BLAST of CmoCh06G008370 vs. ExPASy TrEMBL
Match: A0A0A0L5D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017160 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88 Identity = 183/247 (74.09%), Postives = 199/247 (80.57%), Query Frame = 0
BLAST of CmoCh06G008370 vs. ExPASy TrEMBL
Match: A0A1S3BLD8 (uncharacterized protein LOC103490842 OS=Cucumis melo OX=3656 GN=LOC103490842 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86 Identity = 178/242 (73.55%), Postives = 195/242 (80.58%), Query Frame = 0
BLAST of CmoCh06G008370 vs. TAIR 10
Match: AT4G17600.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 245.7 bits (626), Expect = 6.4e-65 Identity = 136/239 (56.90%), Postives = 167/239 (69.87%), Query Frame = 0
BLAST of CmoCh06G008370 vs. TAIR 10
Match: AT5G47110.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 245.7 bits (626), Expect = 6.4e-65 Identity = 138/241 (57.26%), Postives = 164/241 (68.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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