CmoCh06G008360 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G008360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cmo_Chr06: 4605041 .. 4608962 (-)
RNA-Seq Expression	CmoCh06G008360
Synteny	CmoCh06G008360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCTGTCAGTCTCATTATCGCTCGGCTTCTCAAGGTTTTCCAGTCATGGAGGTCGCCACCACTGCCTCCACCTTCTCGCTTACTAAGCGAATATCGCCGTTAATTGCTTCTTCCCATCATCGAAAATCTACCCGAACCATGTCCTTTTCGCCCTCCTCTCTCAGAACCAAGCCACTTTCTACTAATTTTCTCATCCCATTCGTCGGAGGGAGTGTTTCCGGGGACTTTTCAGGCCTGAAGCTCCGGCCGTCCTCTCTTAATCCGGATTCTTTCCGTGGATCCAAGGGCAAGCGGGGCGTTGTTACTATGGTAAGTGCCTGAACATTACTGTTCTTCCGGTGCCATTGGTTGTTCTTTTAATAACTTTGGTTCACAATTGTAGTTTATGAGTCCTCTTCTGGCGAAAATTGCGCATATTGGGTTGAACTTTTGTTGCTTGTTTGTTATTTTACTACTTTGGTTCACTAAATTGTAGTTTACGAGTCCTCTTTTGGAGGATTTGTGCGATGCTTTGTGAAAAGTAGGGCAGAGATTGAAGATGTTTTACTTAGATGGGTGTGCTTGAATACTAATAAACGAAGCTCTCAATTTCAAATAGGTGAGTAGATTATATTGGAGTCTAGAAGATAGATTCAATTGGGAAAACTTTTGCGACTTCAACTACCTATCAATGTATATGTTGGCTTGAAAGAACCGACTCTGTTCTAAATTTAAACGATGAACAATGATTCTTAACTGTTAATGGCCTCCCCTAAACTCTAAAATGTTCTGTTCGGATCCATTCTCCATTCCTGCTTGTTTCTTGTGTCTTATCTACCTAATTTCTTTGAATAGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTTTACTTGGGCATGTCTCTTGTCCCTTCTGTCACGGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGAAAAGCCTATATATCTCTACATTAACTCCACAGGAACAACAAAGGTTAACCATGCTTTAAATTTTATGCAGATTAGCTTTGTTTGGATGTCTCATTTTCTCTAGCTTGAATTTTATGACCTTGGTTTTTTTTCTTTTTTCTTTTTTCATTTTTAATGGTCGTGATGAAGCAACTGGCACAAGCTTGTGTTGAGTTAATTACTTGCGCTAGTCGTTTATAGTGATGAGACAACATGAGGAGCAGGGAAAGTTGTATTCAATTTACAGTTGCTGTTCTAATAGGAAAGCAGTGCTTCAGTTTTTTTTTCTTGACAAAAAACAACACGCACAATGATGTGCTTTGATCTTTCATCCTCCCCTTCCTGTTTTCAACGGTCTTATAAAAAATGCAGCTTACCTTTTATTAAAGAAAATGTTTGTCATCTTTAACTTGCGTGCACGAAAATGATTATTAACCTTGTTTCCTTTTCCATGTGATAGTAGATCATAATGAAATGCTTGTATTTTTCAGGGTGGTGAGAAATTGGGCTATGAGACTGAAGCATTTGCAGTATATGATGTTATGAGGTTGTGATGTGAATCTTTATATATAATTGGTCTGCTTTACGGTTATTTAGAATCTCATTATTGCGCATTCAAGACTTTTTGAGGACCTAATGAAATATGTTTAATCTCCATCACTATTTTCCACTGCAGGTATATTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGAGAAGCATCACTTCTTTTGTCAGCTGGTGCTAAGGGAAACCGTTCTGCATTGCCCTCATCGACAATAATGATGAAGCAGGTATTCTATATCAGAAACTGATGTCTTTGTTTTGTTTTCTCCCCTTATTCTTCTATTCATTTCCTACCTTCACAAAGGTGTTTTGCATTAAAGCTGATGTTTTGATATACTTCTGTGCAGTTCTAATCCTTTTTACCCTCTTTCAATCTGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACGTTGAGCTTGCTAGAAAAGAAATACGAAATGTGAAGGTAGAGCTGGTAAGATCATGGCTCAAACTTGTATACTGGATTTCCTTCTCTTCATTGTCATACTCTATTTTTGTCCTCGTGAAATGTGCAGTATGGATGTGCATTTGTTATTGTAGAATCGGGTTCTCAATTGGCCGTTATTATTATTATTATTATTCTTTGGTTAAGAAACCAAAATCGTGTACAAAATAAGGACAAAGATTATAGAAAGGGGAAGGACTTGGAGGCATCTTCCGAGCTCAAATTAGGATTTACAGGAAGTCCACCTATTTAGATTACAAAGAAGGGCTAGTGACAAAAATGCCTATCAAAAGAGGCATGAAGAAGTGGCTAAAAAGTTAGTTCTAGGCACTGGCAACAACATAAAGGAAGGGGTCCATGTAGCTGTTAGCGCCTGCCCCTTCTTAGTCAATGGGGCAGTAAGTTCGGCTTCCACTAGAAAATAAAGAATCCACTTTAGATAACCACGCATCCGCTAGGCAGCGTGTGGAATAGCCGAGAGCAAACCTTTTTGGATATATAATCCAAGTCGAAAGTGGAGTTACGCCCCCTTCTTAGTCTATGGGGCAGAAGGTTTGGCATCCACTAGAAAAGAGAGAATCCACTTCAGATAACCACATCTCAGGTAGGCAGCATGTGGAATAGCAGAGAGCGGACCTTTTTAGATATATAATCCAAGTTGAGAGTGGAGTTACAGAAACAGTCGTCCAATGAAAAACAACTTCTATTTGTGTTATAGGGTTGTTTCTGGAAAGTTGAGAAGTTACATTGTTCCCTCTAAACAACATTGTTCCCTCTAAACAAGTGTAGGTAAATGAACTTACAGTTCTTTACATTTTAACATTGATATTGAAGGTTAAGCTTTATGCGAAGCATATCGGAAAGTCGCCTGAGGAGATCGAAGCTGATATTAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACCTGAACTGCACAGTGGTTACTAATTCATCATATGTTATTGAGATTCGTTTTAAATTGCATATCATTGACTTTCACCAGGTGATATACAATGAAAGAAGCACCGAAGACCGGGGGGTTGTATCTGACCTGAAAAAAGCGCAATTGATTTAGAAAAATGGATTGCTCATTACAAGGAATACCAAGGTAATAAAGTTCAATTACAAATCATAGAGAGATATTCCAGAAATTGCCTTGATTCATGATTATGCATTGCTTATTATGCTTGCCACGAGACTGTCATTTGGAGCCATGATCACCGAGGTTATTAACTCTTGTTTAAGCACTTAGAAAGACGTTCCAAAACCGCGTCCTTGCGTCCTTATAAGCCAAGCTAAACCAGTTAAAGGACATAAACAACCACCCTTCCCTGTTCTTGTTTTCTGTTGTAAAAATTATAAAAATCTTCATCTGGGAGATTCAAAGTAATCTAATAGTTTGTTCCTACTGTCTCAGATTGAAGTTTGGACAAATAGTGGAATCTGAGAAGTGAACTGAAATCTGGAATCCTGAATTTGTTGCGCTGCGGAAGTTTCTGAATTATAATACTTCTGTAGAACAATGCTACAAAAAGGAAAACTGATGAGCATTTACTGATGTTGCTCAATCTTCAACCAAGAAATTCTTACCTTTTATTTGCCAATCTGTTGAATCTTAAAGATTTGGTAATGTGCAGTGCAAATTCTTCCATCTTTCTCGTATTGAGGAAACATGCTTTCGAAGCTTCATTTGCATTGACTGAATTTAATTGATGTGCGAATAAGAATTAGTAAAATAAATGTCTGTCATTAAGTTTCATGAAGTGGAACGCAGTATTTATGGTTTATTTTATTTTTTATAATTATTGTATTCCACTTTAAAATTGAATACACA

mRNA sequence

TCTTCTGTCAGTCTCATTATCGCTCGGCTTCTCAAGGTTTTCCAGTCATGGAGGTCGCCACCACTGCCTCCACCTTCTCGCTTACTAAGCGAATATCGCCGTTAATTGCTTCTTCCCATCATCGAAAATCTACCCGAACCATGTCCTTTTCGCCCTCCTCTCTCAGAACCAAGCCACTTTCTACTAATTTTCTCATCCCATTCGTCGGAGGGAGTGTTTCCGGGGACTTTTCAGGCCTGAAGCTCCGGCCGTCCTCTCTTAATCCGGATTCTTTCCGTGGATCCAAGGGCAAGCGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTTTACTTGGGCATGTCTCTTGTCCCTTCTGTCACGGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGAAAAGCCTATATATCTCTACATTAACTCCACAGGAACAACAAAGGGTGGTGAGAAATTGGGCTATGAGACTGAAGCATTTGCAGTATATGATGTTATGAGGTATATTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGAGAAGCATCACTTCTTTTGTCAGCTGGTGCTAAGGGAAACCGTTCTGCATTGCCCTCATCGACAATAATGATGAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACGTTGAGCTTGCTAGAAAAGAAATACGAAATGTGAAGGTAGAGCTGGTTAAGCTTTATGCGAAGCATATCGGAAAGTCGCCTGAGGAGATCGAAGCTGATATTAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTGATATACAATGAAAGAAGCACCGAAGACCGGGGGGTTGTATCTGACCTGAAAAAAGCGCAATTGATTTAGAAAAATGGATTGCTCATTACAAGGAATACCAAGATTGAAGTTTGGACAAATAGTGGAATCTGAGAAGTGAACTGAAATCTGGAATCCTGAATTTGTTGCGCTGCGGAAGTTTCTGAATTATAATACTTCTGTAGAACAATGCTACAAAAAGGAAAACTGATGAGCATTTACTGATGTTGCTCAATCTTCAACCAAGAAATTCTTACCTTTTATTTGCCAATCTGTTGAATCTTAAAGATTTGGTAATGTGCAGTGCAAATTCTTCCATCTTTCTCGTATTGAGGAAACATGCTTTCGAAGCTTCATTTGCATTGACTGAATTTAATTGATGTGCGAATAAGAATTAGTAAAATAAATGTCTGTCATTAAGTTTCATGAAGTGGAACGCAGTATTTATGGTTTATTTTATTTTTTATAATTATTGTATTCCACTTTAAAATTGAATACACA

Coding sequence (CDS)

ATGGAGGTCGCCACCACTGCCTCCACCTTCTCGCTTACTAAGCGAATATCGCCGTTAATTGCTTCTTCCCATCATCGAAAATCTACCCGAACCATGTCCTTTTCGCCCTCCTCTCTCAGAACCAAGCCACTTTCTACTAATTTTCTCATCCCATTCGTCGGAGGGAGTGTTTCCGGGGACTTTTCAGGCCTGAAGCTCCGGCCGTCCTCTCTTAATCCGGATTCTTTCCGTGGATCCAAGGGCAAGCGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTTTACTTGGGCATGTCTCTTGTCCCTTCTGTCACGGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGAAAAGCCTATATATCTCTACATTAACTCCACAGGAACAACAAAGGGTGGTGAGAAATTGGGCTATGAGACTGAAGCATTTGCAGTATATGATGTTATGAGGTATATTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGAGAAGCATCACTTCTTTTGTCAGCTGGTGCTAAGGGAAACCGTTCTGCATTGCCCTCATCGACAATAATGATGAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACGTTGAGCTTGCTAGAAAAGAAATACGAAATGTGAAGGTAGAGCTGGTTAAGCTTTATGCGAAGCATATCGGAAAGTCGCCTGAGGAGATCGAAGCTGATATTAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTGATATACAATGAAAGAAGCACCGAAGACCGGGGGGTTGTATCTGACCTGAAAAAAGCGCAATTGATTTAG

Protein sequence

MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGDFSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKKAQLI

Homology

[Close]

BLAST of CmoCh06G008360 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 7.1e-127
Identity = 236/306 (77.12%), Postives = 266/306 (86.93%), Query Frame = 0


Query: 1   MEV-ATTASTF-SLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVS 60
           MEV A TA++F +L  R S +I SS     ++    S SSLR   LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRAS-LSNGFLSPYTGGSIS 60

Query: 61  GDFSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR  SLNP +F  SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIK 180
           MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK GEKLGY+TEAFA+YDVM Y+K
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVK 180

Query: 181 PPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRN 240
           PPIFTLCVGNAWGEA+LLL+AGAKGNRSALPSSTIM+KQPIARFQGQATDVE+ARKEI++
Sbjct: 181 PPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKH 240

Query: 241 VKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDL 300
           +K E+VKLY+KHIGKSPE+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDL
Sbjct: 241 IKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDL 300

Query: 301 KKAQLI 305
           KKAQLI
Sbjct: 301 KKAQLI 305

[Close]

BLAST of CmoCh06G008360 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.0e-50
Identity = 96/204 (47.06%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 91  PFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYED 150
           P+    ++  PPPDL S L K RI+YLGM L  S          VTELI+A+ LYL++++
Sbjct: 11  PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDN 70

Query: 151 EEKPIYLYINSTGTT-KGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSA 210
            EKPIY YINSTGT+   G+ +GYETEAFA+ D MRYIKPP+ T+C+G A G A+++LS 
Sbjct: 71  PEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSG 130

Query: 211 GAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIE 270
           G  GNR++LP +TI++ QP    QGQA+D+++  KE+   K  +++++A++ G+ P+ + 
Sbjct: 131 GTPGNRASLPHATIVLNQPRTGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLA 190

Query: 271 ADIRRPKYFSPSEAVEYGIIDKVI 284
            D  R  Y +P++AVEYG+ID+V+
Sbjct: 191 RDTDRMLYMTPAQAVEYGLIDRVL 214

[Close]

BLAST of CmoCh06G008360 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-46
Identity = 92/198 (46.46%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 97  AWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYEDEEKPIY 156
           A++ PPPDL S L K RIVYLGM L  S          VT+LI+A+ LYLQ++D +KPIY
Sbjct: 15  AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74

Query: 157 LYINSTGTT-KGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNR 216
            YINSTGT+   G+ +G+ETEAFA+ D + YIKPP+ T+C+G A G A+++LS+G KG R
Sbjct: 75  FYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYR 134

Query: 217 SALPSSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRP 276
           ++LP +TI++ Q     QGQATD+++  KE+ + K  ++++ + + G++ E++  D+ R 
Sbjct: 135 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRT 194

Query: 277 KYFSPSEAVEYGIIDKVI 284
            Y +P++A EYG+ID+V+
Sbjct: 195 FYLTPAQAKEYGLIDRVL 212

[Close]

BLAST of CmoCh06G008360 vs. ExPASy Swiss-Prot
Match: Q7NEW1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.1e-42
Identity = 90/192 (46.88%), Postives = 124/192 (64.58%), Query Frame = 0


Query: 92  FSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINS 151
           +S    +  PPPDL S L   RIVYLG  +   V EL++A+ LYL+ ED  KPI +YINS
Sbjct: 16  YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINS 75

Query: 152 TGTTKGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSS 211
            G        G+ET AFAVYD MR+++ PI T+C+G A G ++LL++AG KG R +LP+S
Sbjct: 76  PGVA------GFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNS 135

Query: 212 TIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPS 271
            I++ QP    +GQATD+ +  +E+   K  L +L + H GK+ E+I+ D  R  Y SP 
Sbjct: 136 RIILYQPYGGARGQATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQ 195

Query: 272 EAVEYGIIDKVI 284
           EAV YG+IDKV+
Sbjct: 196 EAVSYGLIDKVL 201

[Close]

BLAST of CmoCh06G008360 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.1e-42
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CmoCh06G008360 vs. ExPASy TrEMBL
Match: A0A6J1F8U0 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111441877 PE=3 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 4.7e-166
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60
           MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
           VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK
Sbjct: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CmoCh06G008360 vs. ExPASy TrEMBL
Match: A0A6J1KT89 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111498455 PE=3 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.9e-163
Identity = 298/304 (98.03%), Postives = 300/304 (98.68%), Query Frame = 0


Query: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60
           MEVATTASTFSLTKRISPL ASSHHRKSTRTMS SPSSLRTKPLSTNFLIPFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLTASSHHRKSTRTMSLSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKV+YNER TEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERGTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CmoCh06G008360 vs. ExPASy TrEMBL
Match: A0A6J1DRW9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022646 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.6e-152
Identity = 276/304 (90.79%), Postives = 289/304 (95.07%), Query Frame = 0


Query: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60
           MEVATTASTF+LTKRISP I SSH+ KS R +SFS SSLR  PLSTNFL PF GGSVSGD
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+G+KLRPSSLNPDS RGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMRY+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIMMKQPIARFQGQATD+ELARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIELARKEVRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKLYAKHIGKS EEIEADIRRPKYFSPSEAVEYGIIDKV+YNERS EDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CmoCh06G008360 vs. ExPASy TrEMBL
Match: A0A5A7THF6 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00710 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 8.1e-150
Identity = 271/304 (89.14%), Postives = 291/304 (95.72%), Query Frame = 0


Query: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60
           MEVATTAS+F+LTKRISPL ASS++ KS RT+S S SS+RT PLSTNFLIPF GGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMRY+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQATDVELARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKL+AKH+GKS EEIEADIRRPKYF+PSEAVEYGIIDKV+YNER+TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CmoCh06G008360 vs. ExPASy TrEMBL
Match: A0A1S3BJW8 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490843 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 8.1e-150
Identity = 271/304 (89.14%), Postives = 291/304 (95.72%), Query Frame = 0


Query: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60
           MEVATTAS+F+LTKRISPL ASS++ KS RT+S S SS+RT PLSTNFLIPF GGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMRY+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQATDVELARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKL+AKH+GKS EEIEADIRRPKYF+PSEAVEYGIIDKV+YNER+TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 305
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of CmoCh06G008360 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 454.9 bits (1169), Expect = 5.0e-128
Identity = 236/306 (77.12%), Postives = 266/306 (86.93%), Query Frame = 0


Query: 1   MEV-ATTASTF-SLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVS 60
           MEV A TA++F +L  R S +I SS     ++    S SSLR   LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRAS-LSNGFLSPYTGGSIS 60

Query: 61  GDFSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR  SLNP +F  SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIK 180
           MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK GEKLGY+TEAFA+YDVM Y+K
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVK 180

Query: 181 PPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRN 240
           PPIFTLCVGNAWGEA+LLL+AGAKGNRSALPSSTIM+KQPIARFQGQATDVE+ARKEI++
Sbjct: 181 PPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKH 240

Query: 241 VKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDL 300
           +K E+VKLY+KHIGKSPE+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDL
Sbjct: 241 IKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDL 300

Query: 301 KKAQLI 305
           KKAQLI
Sbjct: 301 KKAQLI 305

[Close]

BLAST of CmoCh06G008360 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CmoCh06G008360 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CmoCh06G008360 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of CmoCh06G008360 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-39
Identity = 89/203 (43.84%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 95  GSAWEQP---PPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINS 154
           G   E+P   PPDL S L   RI YLGM +VP+VTEL++A+F++L Y++  KPIYLYINS
Sbjct: 159 GGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINS 218

Query: 155 TGT-TKGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALP- 214
            GT  +  E +G ETEA+A+ D + Y K  ++T+  G A+G+A++LLS G KG R+  P 
Sbjct: 219 PGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPH 278

Query: 215 SSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFS 274
           SST +    + R  G A D+ +  KE+       ++L AK  GKS E+I  DI+RPKY  
Sbjct: 279 SSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQ 338

Query: 275 PSEAVEYGIIDKVIYNERSTEDR 293
              A++YGI DK+  ++ S+ ++
Sbjct: 339 AQAAIDYGIADKIADSQDSSFEK 361

The following BLAST results are available for this feature:

BLAST of CmoCh06G008360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB10	7.1e-127	77.12	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
Q9L4P4	7.0e-50	47.06	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
P74466	2.8e-46	46.46	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
Q7NEW1	4.1e-42	46.88	ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strai...	[more]
Q8L770	4.1e-42	48.13	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]

BLAST of CmoCh06G008360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8U0	4.7e-166	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KT89	2.9e-163	98.03	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1DRW9	6.6e-152	90.79	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7THF6	8.1e-150	89.14	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BJW8	8.1e-150	89.14	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of CmoCh06G008360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17040.1	5.0e-128	77.12	CLP protease R subunit 4	[more]
AT1G09130.1	2.9e-43	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	2.9e-43	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	2.9e-43	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	2.0e-39	43.84	CLP protease proteolytic subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	GENE3D	3.90.226.10		coord: 76..291 e-value: 9.2E-67 score: 226.6
None	No IPR available	PANTHER	PTHR10381:SF65	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 13..303
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 261..280 score: 44.62 coord: 104..119 score: 40.62 coord: 183..200 score: 45.42 coord: 144..164 score: 33.93 coord: 204..223 score: 39.25
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 104..282 e-value: 1.35493E-87 score: 257.37
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 104..285 e-value: 1.1E-50 score: 172.0
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 13..303
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 99..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008360.1	CmoCh06G008360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity