CmoCh06G008290 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G008290
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr06: 4534099 .. 4536078 (+)
RNA-Seq ExpressionCmoCh06G008290
SyntenyCmoCh06G008290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATCAATCTTAGAAACTCAAGGGCATACGCCCAATTTTCCCCATCTCTATTCCGCCGTATCCAGAACCTTCATGTCAATTCGAATGAAGAATCGTCTCCCATTTCTTGTTCCAACCACTCACCGCGAAGAACCCATTTGGTTTCCCCCAATAACATGACCCCAAGAGTTCATGTTCAAACCACTTCTGACGTTGTTTCGTTGAATAAATCAATCACCAACTTTGTTAGGGCTGGGGATTTAGAATCTGCCCACAAAGTGTTCGACAAAATGCCTGTTAGAACCACGGTTACATGGAATTCAATTCTGTCGGGATATACGAAAGTCGCTGGGAAAATGAAGGAAGCCCGTGAAGTGTTTGATAAAATTCCTGAACCAGATTCTGTATCTTATAACATCATGTTGGCTTGTTATTTGAGAAACTGTGGTGTTGAGGCTGCTTTGGCCTTCTTTAACACGATGCCTGTCAAGGATATTGCCTCTTGGAATACATTGATATCTGGGTTTGCCCGGCATGGGCAAATGAAAGAAGCGTTTGACTTGTTTTCGGTAATGCCGGAGAAAAATGGTGTCTCGTGGAGTGCCATGATTTCTGGATATGTGGAATATGGAGATTTGGAGGCAGCTGAGGAGTTGTATAAGAATGCGTTTATCAAGAGCGTGGTTGTGGAGACTGCAATGCTTACAGGGTATATGAAGTTTGGGAAGGTGGAGTTAGCTGAAAGGATATTTCGAAGGATGGCTGTGAGGAATTTGGTCACATGGAACTCTATGATAGCAGGTTATGTTGAGAACTGTCGCGCCGAGGATGGTTTGAAGCTCTTCAAGGCAATGATTGAAACTCGGGCGAGGCCGAATCCTTCGAGTATGAGCAGTGTTCTTCTTTGCTGTAGCAACTTGTCTGCTTTGCCAATGGGAAGGCAAGTACATAATCTGGTGAGTAAATCTCCATTATCCAAAGATATAACTGCTTGTACTTCATTGATTAGCATGTACTGCAAGTGTGGAGATCTGGATAGTGCCTGGAAGTTGTTTGTTGAGATGCCTCTAAAGGATGTGATCACTTGGAATGCCATGATTTCTGGTTATGCTCAACACGGTGCAGGTCGAAAAGCTCTTCATTTGTTCGACGAGATGAGAAACGGAGCAATGAAACCAGATTGGATCACATTCGTTGCTGTTCTATTGGCTTGTAACCACGCTGGATTTGTTGATCTCGGGGTTCGATATTTCAAGTCTATGAAGGAGTTTGGAATTGAAGCAAAACCAGACCACTACACATGTGTAATAGACCTTCTCGGTCGAGCTGGTAAGCTCGACGAAGCTGTAAGTATGATCAATGAGATGCCATTCAAGCCTCATGCTGCAATCTTTGGAACTCTCTTGGGTGCCTGTAGAATCCACAAAAACCTAGATATGGCAGAATTTGCAGCCAAAAATTTGTTAGAACTTGACCCCAAGAGTGCCACCGGATACGTACAGCTTGCTAATATCTACGCATCGACGAACAAATGGGATCGAGTGGCTAAAGTGAGGAAGATGATGAAAGAACACAATGTCATTAAAATACCGGGTTACAGTTGGATCGAGATCAAGAGTGTAACTCATGAATTCAGATCAGGTGACAGAATTCATCCAGAATTGACATCAATACACAACAAACTAAATGAGTTAGATGGGAAAATGAAGGTGGCTGGGTATGTTCCAGACCTTGAATTTGTACTGCATGATGTAGAAGAAGAACACAAAGAGAAGCTACTACTATGGCACAGTGAAAAACTGGCGATTGCTTTCGGATTGATAAAAACAGCGCCCGGGACTCCGATTCGAGTTTTTAAAAACTTGAGAGTATGTGGGGATTGTCACAGAGCAATCAAGTTCATATCGGAGATTGAGAAAAGGGAGATTATTGTGAGAGACACTACAAGGTTTCATCATTTTAGAAATGGTTTCTGCTCTTGTGGTGATTACTGGTAA

mRNA sequence

ATGATCATCAATCTTAGAAACTCAAGGGCATACGCCCAATTTTCCCCATCTCTATTCCGCCGTATCCAGAACCTTCATGTCAATTCGAATGAAGAATCGTCTCCCATTTCTTGTTCCAACCACTCACCGCGAAGAACCCATTTGGTTTCCCCCAATAACATGACCCCAAGAGTTCATGTTCAAACCACTTCTGACGTTGTTTCGTTGAATAAATCAATCACCAACTTTGTTAGGGCTGGGGATTTAGAATCTGCCCACAAAGTGTTCGACAAAATGCCTGTTAGAACCACGGTTACATGGAATTCAATTCTGTCGGGATATACGAAAGTCGCTGGGAAAATGAAGGAAGCCCGTGAAGTGTTTGATAAAATTCCTGAACCAGATTCTGTATCTTATAACATCATGTTGGCTTGTTATTTGAGAAACTGTGGTGTTGAGGCTGCTTTGGCCTTCTTTAACACGATGCCTGTCAAGGATATTGCCTCTTGGAATACATTGATATCTGGGTTTGCCCGGCATGGGCAAATGAAAGAAGCGTTTGACTTGTTTTCGGTAATGCCGGAGAAAAATGGTGTCTCGTGGAGTGCCATGATTTCTGGATATGTGGAATATGGAGATTTGGAGGCAGCTGAGGAGTTGTATAAGAATGCGTTTATCAAGAGCGTGGTTGTGGAGACTGCAATGCTTACAGGGTATATGAAGTTTGGGAAGGTGGAGTTAGCTGAAAGGATATTTCGAAGGATGGCTGTGAGGAATTTGGTCACATGGAACTCTATGATAGCAGGTTATGTTGAGAACTGTCGCGCCGAGGATGGTTTGAAGCTCTTCAAGGCAATGATTGAAACTCGGGCGAGGCCGAATCCTTCGAGTATGAGCAGTGTTCTTCTTTGCTGTAGCAACTTGTCTGCTTTGCCAATGGGAAGGCAAGTACATAATCTGGTGAGTAAATCTCCATTATCCAAAGATATAACTGCTTGTACTTCATTGATTAGCATGTACTGCAAGTGTGGAGATCTGGATAGTGCCTGGAAGTTGTTTGTTGAGATGCCTCTAAAGGATGTGATCACTTGGAATGCCATGATTTCTGGTTATGCTCAACACGGTGCAGGTCGAAAAGCTCTTCATTTGTTCGACGAGATGAGAAACGGAGCAATGAAACCAGATTGGATCACATTCGTTGCTGTTCTATTGGCTTGTAACCACGCTGGATTTGTTGATCTCGGGGTTCGATATTTCAAGTCTATGAAGGAGTTTGGAATTGAAGCAAAACCAGACCACTACACATGTGTAATAGACCTTCTCGGTCGAGCTGGTAAGCTCGACGAAGCTGTAAGTATGATCAATGAGATGCCATTCAAGCCTCATGCTGCAATCTTTGGAACTCTCTTGGGTGCCTGTAGAATCCACAAAAACCTAGATATGGCAGAATTTGCAGCCAAAAATTTGTTAGAACTTGACCCCAAGAGTGCCACCGGATACGTACAGCTTGCTAATATCTACGCATCGACGAACAAATGGGATCGAGTGGCTAAAGTGAGGAAGATGATGAAAGAACACAATGTCATTAAAATACCGGGTTACAGTTGGATCGAGATCAAGAGTGTAACTCATGAATTCAGATCAGGTGACAGAATTCATCCAGAATTGACATCAATACACAACAAACTAAATGAGTTAGATGGGAAAATGAAGGTGGCTGGGTATGTTCCAGACCTTGAATTTGTACTGCATGATGTAGAAGAAGAACACAAAGAGAAGCTACTACTATGGCACAGTGAAAAACTGGCGATTGCTTTCGGATTGATAAAAACAGCGCCCGGGACTCCGATTCGAGTTTTTAAAAACTTGAGAGTATGTGGGGATTGTCACAGAGCAATCAAGTTCATATCGGAGATTGAGAAAAGGGAGATTATTGTGAGAGACACTACAAGGTTTCATCATTTTAGAAATGGTTTCTGCTCTTGTGGTGATTACTGGTAA

Coding sequence (CDS)

ATGATCATCAATCTTAGAAACTCAAGGGCATACGCCCAATTTTCCCCATCTCTATTCCGCCGTATCCAGAACCTTCATGTCAATTCGAATGAAGAATCGTCTCCCATTTCTTGTTCCAACCACTCACCGCGAAGAACCCATTTGGTTTCCCCCAATAACATGACCCCAAGAGTTCATGTTCAAACCACTTCTGACGTTGTTTCGTTGAATAAATCAATCACCAACTTTGTTAGGGCTGGGGATTTAGAATCTGCCCACAAAGTGTTCGACAAAATGCCTGTTAGAACCACGGTTACATGGAATTCAATTCTGTCGGGATATACGAAAGTCGCTGGGAAAATGAAGGAAGCCCGTGAAGTGTTTGATAAAATTCCTGAACCAGATTCTGTATCTTATAACATCATGTTGGCTTGTTATTTGAGAAACTGTGGTGTTGAGGCTGCTTTGGCCTTCTTTAACACGATGCCTGTCAAGGATATTGCCTCTTGGAATACATTGATATCTGGGTTTGCCCGGCATGGGCAAATGAAAGAAGCGTTTGACTTGTTTTCGGTAATGCCGGAGAAAAATGGTGTCTCGTGGAGTGCCATGATTTCTGGATATGTGGAATATGGAGATTTGGAGGCAGCTGAGGAGTTGTATAAGAATGCGTTTATCAAGAGCGTGGTTGTGGAGACTGCAATGCTTACAGGGTATATGAAGTTTGGGAAGGTGGAGTTAGCTGAAAGGATATTTCGAAGGATGGCTGTGAGGAATTTGGTCACATGGAACTCTATGATAGCAGGTTATGTTGAGAACTGTCGCGCCGAGGATGGTTTGAAGCTCTTCAAGGCAATGATTGAAACTCGGGCGAGGCCGAATCCTTCGAGTATGAGCAGTGTTCTTCTTTGCTGTAGCAACTTGTCTGCTTTGCCAATGGGAAGGCAAGTACATAATCTGGTGAGTAAATCTCCATTATCCAAAGATATAACTGCTTGTACTTCATTGATTAGCATGTACTGCAAGTGTGGAGATCTGGATAGTGCCTGGAAGTTGTTTGTTGAGATGCCTCTAAAGGATGTGATCACTTGGAATGCCATGATTTCTGGTTATGCTCAACACGGTGCAGGTCGAAAAGCTCTTCATTTGTTCGACGAGATGAGAAACGGAGCAATGAAACCAGATTGGATCACATTCGTTGCTGTTCTATTGGCTTGTAACCACGCTGGATTTGTTGATCTCGGGGTTCGATATTTCAAGTCTATGAAGGAGTTTGGAATTGAAGCAAAACCAGACCACTACACATGTGTAATAGACCTTCTCGGTCGAGCTGGTAAGCTCGACGAAGCTGTAAGTATGATCAATGAGATGCCATTCAAGCCTCATGCTGCAATCTTTGGAACTCTCTTGGGTGCCTGTAGAATCCACAAAAACCTAGATATGGCAGAATTTGCAGCCAAAAATTTGTTAGAACTTGACCCCAAGAGTGCCACCGGATACGTACAGCTTGCTAATATCTACGCATCGACGAACAAATGGGATCGAGTGGCTAAAGTGAGGAAGATGATGAAAGAACACAATGTCATTAAAATACCGGGTTACAGTTGGATCGAGATCAAGAGTGTAACTCATGAATTCAGATCAGGTGACAGAATTCATCCAGAATTGACATCAATACACAACAAACTAAATGAGTTAGATGGGAAAATGAAGGTGGCTGGGTATGTTCCAGACCTTGAATTTGTACTGCATGATGTAGAAGAAGAACACAAAGAGAAGCTACTACTATGGCACAGTGAAAAACTGGCGATTGCTTTCGGATTGATAAAAACAGCGCCCGGGACTCCGATTCGAGTTTTTAAAAACTTGAGAGTATGTGGGGATTGTCACAGAGCAATCAAGTTCATATCGGAGATTGAGAAAAGGGAGATTATTGTGAGAGACACTACAAGGTTTCATCATTTTAGAAATGGTTTCTGCTCTTGTGGTGATTACTGGTAA

Protein sequence

MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHVQTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFRSGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW
Homology
BLAST of CmoCh06G008290 vs. ExPASy Swiss-Prot
Match: Q9M4P3 (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)

HSP 1 Score: 837.0 bits (2161), Expect = 1.4e-241
Identity = 400/634 (63.09%), Postives = 495/634 (78.08%), Query Frame = 0

Query: 31  EESSPISCSNHSP---RRTHLVSPNNMTPRVHVQTTSDVVSLNKSITNFVRAGDLESAHK 90
           E  S  SCS+  P   R  +L  P++            +  LNK I   VR+GD++ A +
Sbjct: 32  ESCSSSSCSSPEPSLVRSDYLTKPSDQ---------DQIFPLNKIIARCVRSGDIDGALR 91

Query: 91  VFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEA 150
           VF  M  + T+TWNS+L G +K   +M EA ++FD+IPEPD+ SYNIML+CY+RN   E 
Sbjct: 92  VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 151

Query: 151 ALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDL 210
           A +FF+ MP KD ASWNT+I+G+AR G+M++A +LF  M EKN VSW+AMISGY+E GDL
Sbjct: 152 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 211

Query: 211 EAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAERIFRRMAV-RNLVTWNSMIAGYVEN 270
           E A   +K A ++ VV  TAM+TGYMK  KVELAE +F+ M V +NLVTWN+MI+GYVEN
Sbjct: 212 EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 271

Query: 271 CRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLSALPMGRQVHNLVSKSPLSKDITAC 330
            R EDGLKLF+AM+E   RPN S +SS LL CS LSAL +GRQ+H +VSKS L  D+TA 
Sbjct: 272 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 331

Query: 331 TSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMISGYAQHGAGRKALHLFDEMRNGAMK 390
           TSLISMYCKCG+L  AWKLF  M  KDV+ WNAMISGYAQHG   KAL LF EM +  ++
Sbjct: 332 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 391

Query: 391 PDWITFVAVLLACNHAGFVDLGVRYFKSM-KEFGIEAKPDHYTCVIDLLGRAGKLDEAVS 450
           PDWITFVAVLLACNHAG V++G+ YF+SM +++ +E +PDHYTC++DLLGRAGKL+EA+ 
Sbjct: 392 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 451

Query: 451 MINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKNLLELDPKSATGYVQLANIYASTNK 510
           +I  MPF+PHAA+FGTLLGACR+HKN+++AEFAA+ LL+L+ ++A GYVQLANIYAS N+
Sbjct: 452 LIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNR 511

Query: 511 WDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFRSGDRIHPELTSIHNKLNELDGKMKV 570
           W+ VA+VRK MKE NV+K+PGYSWIEI++  H FRS DRIHPEL SIH KL EL+ KMK+
Sbjct: 512 WEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKL 571

Query: 571 AGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRA 630
           AGY P+LEF LH+VEEE KEKLLLWHSEKLA+AFG IK   G+ I+VFKNLR+CGDCH+A
Sbjct: 572 AGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKA 631

Query: 631 IKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 660
           IKFISEIEKREIIVRDTTRFHHF++G CSCGDYW
Sbjct: 632 IKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656

BLAST of CmoCh06G008290 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.1e-156
Identity = 277/658 (42.10%), Postives = 407/658 (61.85%), Query Frame = 0

Query: 65  DVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKI 124
           D+VS N  I  +VR  +L  A ++F+ MP R   +WN++LSGY +  G + +AR VFD++
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ-NGCVDDARSVFDRM 184

Query: 125 PEPDSVSYNIMLACYLRNCGVEAAL-------------------------------AFFN 184
           PE + VS+N +L+ Y++N  +E A                                 FF+
Sbjct: 185 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 244

Query: 185 TMPVKDIASWNTLISGFARHGQ-------------------------------MKEAFDL 244
           +M V+D+ SWNT+I+G+A+ G+                               ++EA +L
Sbjct: 245 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 304

Query: 245 FSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAE 304
           F  MPE+N VSW+AM++GYV+   +E A+EL+     ++V     M+TGY + GK+  A+
Sbjct: 305 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 364

Query: 305 RIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLS 364
            +F +M  R+ V+W +MIAGY ++  + + L+LF  M     R N SS SS L  C+++ 
Sbjct: 365 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 424

Query: 365 ALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMIS 424
           AL +G+Q+H  + K           +L+ MYCKCG ++ A  LF EM  KD+++WN MI+
Sbjct: 425 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 484

Query: 425 GYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSM-KEFGIE 484
           GY++HG G  AL  F+ M+   +KPD  T VAVL AC+H G VD G +YF +M +++G+ 
Sbjct: 485 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 544

Query: 485 AKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKN 544
               HY C++DLLGRAG L++A +++  MPF+P AAI+GTLLGA R+H N ++AE AA  
Sbjct: 545 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 604

Query: 545 LLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFRS 604
           +  ++P+++  YV L+N+YAS+ +W  V K+R  M++  V K+PGYSWIEI++ TH F  
Sbjct: 605 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 664

Query: 605 GDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGL 660
           GD  HPE   I   L ELD +MK AGYV     VLHDVEEE KE+++ +HSE+LA+A+G+
Sbjct: 665 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 724

BLAST of CmoCh06G008290 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 531.2 bits (1367), Expect = 1.7e-149
Identity = 259/629 (41.18%), Postives = 400/629 (63.59%), Query Frame = 0

Query: 65  DVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKI 124
           +++S N  ++ +++ G+++ A KVFD MP R  V+W +++ GY    GK+  A  +F K+
Sbjct: 78  NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVH-NGKVDVAESLFWKM 137

Query: 125 PEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKD------------------------- 184
           PE + VS+ +ML  +L++  ++ A   +  +P KD                         
Sbjct: 138 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 197

Query: 185 ------IASWNTLISGFARHGQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEEL 244
                 + +W T+++G+ ++ ++ +A  +F VMPEK  VSW++M+ GYV+ G +E AEEL
Sbjct: 198 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 257

Query: 245 YKNAFIKSVVVETAMLTGYMKFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGL 304
           ++   +K V+   AM++G  + G++  A R+F  M  RN  +W ++I  +  N    + L
Sbjct: 258 FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEAL 317

Query: 305 KLFKAMIETRARPNPSSMSSVLLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMY 364
            LF  M +   RP   ++ S+L  C++L++L  G+QVH  + +     D+   + L++MY
Sbjct: 318 DLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMY 377

Query: 365 CKCGDLDSAWKLFVEMPLKDVITWNAMISGYAQHGAGRKALHLFDEM-RNGAMKPDWITF 424
            KCG+L  +  +F   P KD+I WN++ISGYA HG G +AL +F EM  +G+ KP+ +TF
Sbjct: 378 IKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 437

Query: 425 VAVLLACNHAGFVDLGVRYFKSMKE-FGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMP 484
           VA L AC++AG V+ G++ ++SM+  FG++    HY C++D+LGRAG+ +EA+ MI+ M 
Sbjct: 438 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 497

Query: 485 FKPHAAIFGTLLGACRIHKNLDMAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAK 544
            +P AA++G+LLGACR H  LD+AEF AK L+E++P+++  Y+ L+N+YAS  +W  VA+
Sbjct: 498 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 557

Query: 545 VRKMMKEHNVIKIPGYSWIEIKSVTHEF-RSGDRIHPELTSIHNKLNELDGKMKVAGYVP 604
           +RK+MK   V K PG SW E+++  H F R G   HPE  SI   L+ELDG ++ AGY P
Sbjct: 558 LRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNP 617

Query: 605 DLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFIS 660
           D  + LHDV+EE K   L +HSE+LA+A+ L+K + G PIRV KNLRVC DCH AIK IS
Sbjct: 618 DCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIIS 677

BLAST of CmoCh06G008290 vs. ExPASy Swiss-Prot
Match: Q9FXB9 (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 7.6e-142
Identity = 252/597 (42.21%), Postives = 368/597 (61.64%), Query Frame = 0

Query: 65  DVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKI 124
           +VVS    +  +++ G +  A  +F +MP R  V+W  +  G     G++ +AR+++D +
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID-DGRIDKARKLYDMM 168

Query: 125 PEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDLFS 184
           P  D V+   M+    R   V+ A   F+ M  +++ +W T+I+G+ ++ ++  A  LF 
Sbjct: 169 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 228

Query: 185 VMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAERI 244
           VMPEK  VSW++M+ GY   G +E AEE ++   +K V+   AM+ G+ + G++  A R+
Sbjct: 229 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 288

Query: 245 FRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLSAL 304
           F  M  R+  TW  MI  Y       + L LF  M +   RP+  S+ S+L  C+ L++L
Sbjct: 289 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 348

Query: 305 PMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMISGY 364
             GRQVH  + +     D+   + L++MY KCG+L  A  +F     KD+I WN++ISGY
Sbjct: 349 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 408

Query: 365 AQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMK-EFGIEAK 424
           A HG G +AL +F EM +    P+ +T +A+L AC++AG ++ G+  F+SM+ +F +   
Sbjct: 409 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 468

Query: 425 PDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKNLL 484
            +HY+C +D+LGRAG++D+A+ +I  M  KP A ++G LLGAC+ H  LD+AE AAK L 
Sbjct: 469 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 528

Query: 485 ELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEF-RSG 544
           E +P +A  YV L++I AS +KW  VA VRK M+ +NV K PG SWIE+    H F R G
Sbjct: 529 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGG 588

Query: 545 DRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLI 604
            + HPE   I   L + DG ++ AGY PD   VLHDV+EE K   L  HSE+LA+A+GL+
Sbjct: 589 IKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLL 648

Query: 605 KTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 660
           K   G PIRV KNLRVCGDCH AIK IS++ +REII+RD  RFHHF NG CSC DYW
Sbjct: 649 KLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704

BLAST of CmoCh06G008290 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.2e-134
Identity = 239/606 (39.44%), Postives = 379/606 (62.54%), Query Frame = 0

Query: 68  SLNKSITNFVRAGDLESAHKVFDKMPVRTTV-TWNSILSGYTKVAGKMKE--AREVFDKI 127
           S+ KS T  +     ES H    ++ +   + T N++++ Y K+ G   +     VFD++
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169

Query: 128 PEPDSVS--YNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDL 187
           P+  S S   ++     +   G+++    F  MP KD+ S+NT+I+G+A+ G  ++A  +
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229

Query: 188 FSVMP----EKNGVSWSAMISGYVEYGDLEAAEELY----KNAFIKSVVVETAMLTGYMK 247
              M     + +  + S+++  + EY D+   +E++    +      V + ++++  Y K
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289

Query: 248 FGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSV 307
             ++E +ER+F R+  R+ ++WNS++AGYV+N R  + L+LF+ M+  + +P   + SSV
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349

Query: 308 LLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDV 367
           +  C++L+ L +G+Q+H  V +     +I   ++L+ MY KCG++ +A K+F  M + D 
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409

Query: 368 ITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKS 427
           ++W A+I G+A HG G +A+ LF+EM+   +KP+ + FVAVL AC+H G VD    YF S
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469

Query: 428 M-KEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD 487
           M K +G+  + +HY  V DLLGRAGKL+EA + I++M  +P  +++ TLL +C +HKNL+
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529

Query: 488 MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIK 547
           +AE  A+ +  +D ++   YV + N+YAS  +W  +AK+R  M++  + K P  SWIE+K
Sbjct: 530 LAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589

Query: 548 SVTHEFRSGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE 607
           + TH F SGDR HP +  I+  L  +  +M+  GYV D   VLHDV+EEHK +LL  HSE
Sbjct: 590 NKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSE 649

Query: 608 KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFC 660
           +LA+AFG+I T PGT IRV KN+R+C DCH AIKFIS+I +REIIVRD +RFHHF  G C
Sbjct: 650 RLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNC 709

BLAST of CmoCh06G008290 vs. ExPASy TrEMBL
Match: A0A6J1FUN8 (pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447411 PE=3 SV=1)

HSP 1 Score: 1351.3 bits (3496), Expect = 0.0e+00
Identity = 659/659 (100.00%), Postives = 659/659 (100.00%), Query Frame = 0

Query: 1   MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHV 60
           MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHV
Sbjct: 1   MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHV 60

Query: 61  QTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREV 120
           QTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREV
Sbjct: 61  QTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREV 120

Query: 121 FDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAF 180
           FDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAF
Sbjct: 121 FDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAF 180

Query: 181 DLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVEL 240
           DLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVEL
Sbjct: 181 DLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVEL 240

Query: 241 AERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSN 300
           AERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSN
Sbjct: 241 AERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSN 300

Query: 301 LSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAM 360
           LSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAM
Sbjct: 301 LSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAM 360

Query: 361 ISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGI 420
           ISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGI
Sbjct: 361 ISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGI 420

Query: 421 EAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAK 480
           EAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAK
Sbjct: 421 EAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAK 480

Query: 481 NLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFR 540
           NLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFR
Sbjct: 481 NLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFR 540

Query: 541 SGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFG 600
           SGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFG
Sbjct: 541 SGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFG 600

Query: 601 LIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 660
           LIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW
Sbjct: 601 LIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 659

BLAST of CmoCh06G008290 vs. ExPASy TrEMBL
Match: A0A6J1KX44 (pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498358 PE=3 SV=1)

HSP 1 Score: 1318.5 bits (3411), Expect = 0.0e+00
Identity = 645/666 (96.85%), Postives = 653/666 (98.05%), Query Frame = 0

Query: 1   MIINLRNSRAYAQFSPSLFRR-------IQNLHVNSNEESSPISCSNHSPRRTHLVSPNN 60
           MIINLRNSRAYAQFSPSLFRR       IQNLHVNSNEESSPISCSNHSPRRTHLVSPNN
Sbjct: 1   MIINLRNSRAYAQFSPSLFRRFFPTESHIQNLHVNSNEESSPISCSNHSPRRTHLVSPNN 60

Query: 61  MTPRVHVQTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGK 120
           MTP+VHVQ TSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGK
Sbjct: 61  MTPKVHVQPTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGK 120

Query: 121 MKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARH 180
           MKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFAR+
Sbjct: 121 MKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARN 180

Query: 181 GQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYM 240
           GQMK+AFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYM
Sbjct: 181 GQMKDAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYM 240

Query: 241 KFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSS 300
           KFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCR+ DGLKLFKAMIE+RARPN SSMSS
Sbjct: 241 KFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRSNDGLKLFKAMIESRARPNSSSMSS 300

Query: 301 VLLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKD 360
           VLLCCSNLSALPMGRQVHN+VSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKD
Sbjct: 301 VLLCCSNLSALPMGRQVHNMVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKD 360

Query: 361 VITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFK 420
           VITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGV+ FK
Sbjct: 361 VITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVQCFK 420

Query: 421 SMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD 480
           SMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD
Sbjct: 421 SMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD 480

Query: 481 MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIK 540
           MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNV+KIPGYSWIEIK
Sbjct: 481 MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVVKIPGYSWIEIK 540

Query: 541 SVTHEFRSGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE 600
           SVTHEFRSGDRIHPEL SIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE
Sbjct: 541 SVTHEFRSGDRIHPELKSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE 600

Query: 601 KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFC 660
           KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNG C
Sbjct: 601 KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGIC 660

BLAST of CmoCh06G008290 vs. ExPASy TrEMBL
Match: A0A6J1FRC9 (pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447411 PE=3 SV=1)

HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 633/659 (96.05%), Postives = 633/659 (96.05%), Query Frame = 0

Query: 1   MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHV 60
           MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHV
Sbjct: 1   MIINLRNSRAYAQFSPSLFRRIQNLHVNSNEESSPISCSNHSPRRTHLVSPNNMTPRVHV 60

Query: 61  QTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREV 120
           QTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREV
Sbjct: 61  QTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREV 120

Query: 121 FDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAF 180
           FDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAF
Sbjct: 121 FDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAF 180

Query: 181 DLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVEL 240
           DLFSVMPEKNGVSW                          SVVVETAMLTGYMKFGKVEL
Sbjct: 181 DLFSVMPEKNGVSW--------------------------SVVVETAMLTGYMKFGKVEL 240

Query: 241 AERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSN 300
           AERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSN
Sbjct: 241 AERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSN 300

Query: 301 LSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAM 360
           LSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAM
Sbjct: 301 LSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAM 360

Query: 361 ISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGI 420
           ISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGI
Sbjct: 361 ISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMKEFGI 420

Query: 421 EAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAK 480
           EAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAK
Sbjct: 421 EAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAK 480

Query: 481 NLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFR 540
           NLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFR
Sbjct: 481 NLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFR 540

Query: 541 SGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFG 600
           SGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFG
Sbjct: 541 SGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFG 600

Query: 601 LIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 660
           LIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW
Sbjct: 601 LIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 633

BLAST of CmoCh06G008290 vs. ExPASy TrEMBL
Match: A0A6J1KST8 (pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498358 PE=3 SV=1)

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 619/666 (92.94%), Postives = 627/666 (94.14%), Query Frame = 0

Query: 1   MIINLRNSRAYAQFSPSLFRR-------IQNLHVNSNEESSPISCSNHSPRRTHLVSPNN 60
           MIINLRNSRAYAQFSPSLFRR       IQNLHVNSNEESSPISCSNHSPRRTHLVSPNN
Sbjct: 1   MIINLRNSRAYAQFSPSLFRRFFPTESHIQNLHVNSNEESSPISCSNHSPRRTHLVSPNN 60

Query: 61  MTPRVHVQTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGK 120
           MTP+VHVQ TSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGK
Sbjct: 61  MTPKVHVQPTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGK 120

Query: 121 MKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARH 180
           MKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFAR+
Sbjct: 121 MKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARN 180

Query: 181 GQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYM 240
           GQMK+AFDLFSVMPEKNGVSW                          SVVVETAMLTGYM
Sbjct: 181 GQMKDAFDLFSVMPEKNGVSW--------------------------SVVVETAMLTGYM 240

Query: 241 KFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSS 300
           KFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCR+ DGLKLFKAMIE+RARPN SSMSS
Sbjct: 241 KFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRSNDGLKLFKAMIESRARPNSSSMSS 300

Query: 301 VLLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKD 360
           VLLCCSNLSALPMGRQVHN+VSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKD
Sbjct: 301 VLLCCSNLSALPMGRQVHNMVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKD 360

Query: 361 VITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFK 420
           VITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGV+ FK
Sbjct: 361 VITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVQCFK 420

Query: 421 SMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD 480
           SMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD
Sbjct: 421 SMKEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD 480

Query: 481 MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIK 540
           MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNV+KIPGYSWIEIK
Sbjct: 481 MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVVKIPGYSWIEIK 540

Query: 541 SVTHEFRSGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE 600
           SVTHEFRSGDRIHPEL SIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE
Sbjct: 541 SVTHEFRSGDRIHPELKSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE 600

Query: 601 KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFC 660
           KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNG C
Sbjct: 601 KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGIC 640

BLAST of CmoCh06G008290 vs. ExPASy TrEMBL
Match: A0A5D3CKW0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00630 PE=3 SV=1)

HSP 1 Score: 1186.0 bits (3067), Expect = 0.0e+00
Identity = 577/669 (86.25%), Postives = 617/669 (92.23%), Query Frame = 0

Query: 1   MIINLRNSRAYAQFSPSLFR-------RIQNLHVNSNEESSPISCSN--HSPRRTHLVSP 60
           MII+ R+SRAYA+F  SLFR         +NLH+ SNEESS I CS   H PRR HLVSP
Sbjct: 1   MIIHFRSSRAYAKFPSSLFRHFLPIESHFRNLHLGSNEESSSIVCSTSIHPPRRIHLVSP 60

Query: 61  NNMTPRVHVQTTSDVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVA 120
           NNMTP++HV T SDVVSLNK+I +FVR  DLESA  VFDKM VRTTVTWN++LSGY KVA
Sbjct: 61  NNMTPKLHVDTASDVVSLNKTIASFVRVWDLESARNVFDKMSVRTTVTWNTLLSGYAKVA 120

Query: 121 GKMKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFA 180
           GK+KEA E+FDKIPEPDSVSYNIMLACYLRN GVEAALAFFN MPVKDIASWNTLISGFA
Sbjct: 121 GKVKEAHELFDKIPEPDSVSYNIMLACYLRNYGVEAALAFFNRMPVKDIASWNTLISGFA 180

Query: 181 RHGQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTG 240
           ++GQM++AFDLFSVMPEKNGVSWSAMISG+VE+GDLE AEELYK   +KSVVVETAMLTG
Sbjct: 181 QNGQMQKAFDLFSVMPEKNGVSWSAMISGFVEHGDLETAEELYKKVVVKSVVVETAMLTG 240

Query: 241 YMKFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSM 300
           YMKFGKVELAERIF+RMAV+NLVTWNSMIAGYVENCRAEDGLKLFKAMIE+R RPNP S+
Sbjct: 241 YMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNPLSL 300

Query: 301 SSVLLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPL 360
           SSVLL CSNLSALP+GRQ+H LVSKSPLSKD TACTSLISMYCKCGDLDSAWKLF+EMP 
Sbjct: 301 SSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPQ 360

Query: 361 KDVITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRY 420
           KDVITWNAMISGYAQHGAGRKALHLFD+MRNGAMKPDWITFVAV+LACNHAGFVDLGVRY
Sbjct: 361 KDVITWNAMISGYAQHGAGRKALHLFDKMRNGAMKPDWITFVAVILACNHAGFVDLGVRY 420

Query: 421 FKSM-KEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHK 480
           FKSM KEFGIEAKP HYTCVIDLLGRAG+LDEAVS+I EMPFKPHAAI+GTLLGACRIHK
Sbjct: 421 FKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHK 480

Query: 481 NLDMAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWI 540
           NLD+AEFAA+NLL LDP SATGYVQLANIYA TNKWD+VAKVRKMMKEHNV+KIPGYSWI
Sbjct: 481 NLDLAEFAARNLLNLDPTSATGYVQLANIYAVTNKWDQVAKVRKMMKEHNVVKIPGYSWI 540

Query: 541 EIKSVTHEFRSGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLW 600
           EIKSVTHEFRS DR+HPE+TSIH KLNELDGKMK+AGYVPDLEF LHDVEEEHKEKLLLW
Sbjct: 541 EIKSVTHEFRSSDRVHPEITSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLW 600

Query: 601 HSEKLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRN 660
           HSEKLAIAFGL+KTAPGTPIRVFKNLRVCGDCHRAIKFIS IEKREIIVRDTTRFHHFRN
Sbjct: 601 HSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRN 660

BLAST of CmoCh06G008290 vs. TAIR 10
Match: AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 837.0 bits (2161), Expect = 1.0e-242
Identity = 400/634 (63.09%), Postives = 495/634 (78.08%), Query Frame = 0

Query: 31  EESSPISCSNHSP---RRTHLVSPNNMTPRVHVQTTSDVVSLNKSITNFVRAGDLESAHK 90
           E  S  SCS+  P   R  +L  P++            +  LNK I   VR+GD++ A +
Sbjct: 32  ESCSSSSCSSPEPSLVRSDYLTKPSDQ---------DQIFPLNKIIARCVRSGDIDGALR 91

Query: 91  VFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKIPEPDSVSYNIMLACYLRNCGVEA 150
           VF  M  + T+TWNS+L G +K   +M EA ++FD+IPEPD+ SYNIML+CY+RN   E 
Sbjct: 92  VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 151

Query: 151 ALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDL 210
           A +FF+ MP KD ASWNT+I+G+AR G+M++A +LF  M EKN VSW+AMISGY+E GDL
Sbjct: 152 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 211

Query: 211 EAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAERIFRRMAV-RNLVTWNSMIAGYVEN 270
           E A   +K A ++ VV  TAM+TGYMK  KVELAE +F+ M V +NLVTWN+MI+GYVEN
Sbjct: 212 EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 271

Query: 271 CRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLSALPMGRQVHNLVSKSPLSKDITAC 330
            R EDGLKLF+AM+E   RPN S +SS LL CS LSAL +GRQ+H +VSKS L  D+TA 
Sbjct: 272 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 331

Query: 331 TSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMISGYAQHGAGRKALHLFDEMRNGAMK 390
           TSLISMYCKCG+L  AWKLF  M  KDV+ WNAMISGYAQHG   KAL LF EM +  ++
Sbjct: 332 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 391

Query: 391 PDWITFVAVLLACNHAGFVDLGVRYFKSM-KEFGIEAKPDHYTCVIDLLGRAGKLDEAVS 450
           PDWITFVAVLLACNHAG V++G+ YF+SM +++ +E +PDHYTC++DLLGRAGKL+EA+ 
Sbjct: 392 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 451

Query: 451 MINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKNLLELDPKSATGYVQLANIYASTNK 510
           +I  MPF+PHAA+FGTLLGACR+HKN+++AEFAA+ LL+L+ ++A GYVQLANIYAS N+
Sbjct: 452 LIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNR 511

Query: 511 WDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFRSGDRIHPELTSIHNKLNELDGKMKV 570
           W+ VA+VRK MKE NV+K+PGYSWIEI++  H FRS DRIHPEL SIH KL EL+ KMK+
Sbjct: 512 WEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKL 571

Query: 571 AGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRA 630
           AGY P+LEF LH+VEEE KEKLLLWHSEKLA+AFG IK   G+ I+VFKNLR+CGDCH+A
Sbjct: 572 AGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKA 631

Query: 631 IKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 660
           IKFISEIEKREIIVRDTTRFHHF++G CSCGDYW
Sbjct: 632 IKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656

BLAST of CmoCh06G008290 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 555.1 bits (1429), Expect = 7.8e-158
Identity = 277/658 (42.10%), Postives = 407/658 (61.85%), Query Frame = 0

Query: 65  DVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKI 124
           D+VS N  I  +VR  +L  A ++F+ MP R   +WN++LSGY +  G + +AR VFD++
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ-NGCVDDARSVFDRM 184

Query: 125 PEPDSVSYNIMLACYLRNCGVEAAL-------------------------------AFFN 184
           PE + VS+N +L+ Y++N  +E A                                 FF+
Sbjct: 185 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 244

Query: 185 TMPVKDIASWNTLISGFARHGQ-------------------------------MKEAFDL 244
           +M V+D+ SWNT+I+G+A+ G+                               ++EA +L
Sbjct: 245 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 304

Query: 245 FSVMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAE 304
           F  MPE+N VSW+AM++GYV+   +E A+EL+     ++V     M+TGY + GK+  A+
Sbjct: 305 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 364

Query: 305 RIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLS 364
            +F +M  R+ V+W +MIAGY ++  + + L+LF  M     R N SS SS L  C+++ 
Sbjct: 365 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 424

Query: 365 ALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMIS 424
           AL +G+Q+H  + K           +L+ MYCKCG ++ A  LF EM  KD+++WN MI+
Sbjct: 425 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 484

Query: 425 GYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSM-KEFGIE 484
           GY++HG G  AL  F+ M+   +KPD  T VAVL AC+H G VD G +YF +M +++G+ 
Sbjct: 485 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 544

Query: 485 AKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKN 544
               HY C++DLLGRAG L++A +++  MPF+P AAI+GTLLGA R+H N ++AE AA  
Sbjct: 545 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 604

Query: 545 LLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEFRS 604
           +  ++P+++  YV L+N+YAS+ +W  V K+R  M++  V K+PGYSWIEI++ TH F  
Sbjct: 605 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 664

Query: 605 GDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGL 660
           GD  HPE   I   L ELD +MK AGYV     VLHDVEEE KE+++ +HSE+LA+A+G+
Sbjct: 665 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 724

BLAST of CmoCh06G008290 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 531.2 bits (1367), Expect = 1.2e-150
Identity = 259/629 (41.18%), Postives = 400/629 (63.59%), Query Frame = 0

Query: 65  DVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKI 124
           +++S N  ++ +++ G+++ A KVFD MP R  V+W +++ GY    GK+  A  +F K+
Sbjct: 78  NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVH-NGKVDVAESLFWKM 137

Query: 125 PEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKD------------------------- 184
           PE + VS+ +ML  +L++  ++ A   +  +P KD                         
Sbjct: 138 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 197

Query: 185 ------IASWNTLISGFARHGQMKEAFDLFSVMPEKNGVSWSAMISGYVEYGDLEAAEEL 244
                 + +W T+++G+ ++ ++ +A  +F VMPEK  VSW++M+ GYV+ G +E AEEL
Sbjct: 198 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 257

Query: 245 YKNAFIKSVVVETAMLTGYMKFGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGL 304
           ++   +K V+   AM++G  + G++  A R+F  M  RN  +W ++I  +  N    + L
Sbjct: 258 FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEAL 317

Query: 305 KLFKAMIETRARPNPSSMSSVLLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMY 364
            LF  M +   RP   ++ S+L  C++L++L  G+QVH  + +     D+   + L++MY
Sbjct: 318 DLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMY 377

Query: 365 CKCGDLDSAWKLFVEMPLKDVITWNAMISGYAQHGAGRKALHLFDEM-RNGAMKPDWITF 424
            KCG+L  +  +F   P KD+I WN++ISGYA HG G +AL +F EM  +G+ KP+ +TF
Sbjct: 378 IKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 437

Query: 425 VAVLLACNHAGFVDLGVRYFKSMKE-FGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMP 484
           VA L AC++AG V+ G++ ++SM+  FG++    HY C++D+LGRAG+ +EA+ MI+ M 
Sbjct: 438 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 497

Query: 485 FKPHAAIFGTLLGACRIHKNLDMAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAK 544
            +P AA++G+LLGACR H  LD+AEF AK L+E++P+++  Y+ L+N+YAS  +W  VA+
Sbjct: 498 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 557

Query: 545 VRKMMKEHNVIKIPGYSWIEIKSVTHEF-RSGDRIHPELTSIHNKLNELDGKMKVAGYVP 604
           +RK+MK   V K PG SW E+++  H F R G   HPE  SI   L+ELDG ++ AGY P
Sbjct: 558 LRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNP 617

Query: 605 DLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFIS 660
           D  + LHDV+EE K   L +HSE+LA+A+ L+K + G PIRV KNLRVC DCH AIK IS
Sbjct: 618 DCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIIS 677

BLAST of CmoCh06G008290 vs. TAIR 10
Match: AT1G56690.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 505.8 bits (1301), Expect = 5.4e-143
Identity = 252/597 (42.21%), Postives = 368/597 (61.64%), Query Frame = 0

Query: 65  DVVSLNKSITNFVRAGDLESAHKVFDKMPVRTTVTWNSILSGYTKVAGKMKEAREVFDKI 124
           +VVS    +  +++ G +  A  +F +MP R  V+W  +  G     G++ +AR+++D +
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID-DGRIDKARKLYDMM 168

Query: 125 PEPDSVSYNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDLFS 184
           P  D V+   M+    R   V+ A   F+ M  +++ +W T+I+G+ ++ ++  A  LF 
Sbjct: 169 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 228

Query: 185 VMPEKNGVSWSAMISGYVEYGDLEAAEELYKNAFIKSVVVETAMLTGYMKFGKVELAERI 244
           VMPEK  VSW++M+ GY   G +E AEE ++   +K V+   AM+ G+ + G++  A R+
Sbjct: 229 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 288

Query: 245 FRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSVLLCCSNLSAL 304
           F  M  R+  TW  MI  Y       + L LF  M +   RP+  S+ S+L  C+ L++L
Sbjct: 289 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 348

Query: 305 PMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDVITWNAMISGY 364
             GRQVH  + +     D+   + L++MY KCG+L  A  +F     KD+I WN++ISGY
Sbjct: 349 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 408

Query: 365 AQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKSMK-EFGIEAK 424
           A HG G +AL +F EM +    P+ +T +A+L AC++AG ++ G+  F+SM+ +F +   
Sbjct: 409 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 468

Query: 425 PDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLDMAEFAAKNLL 484
            +HY+C +D+LGRAG++D+A+ +I  M  KP A ++G LLGAC+ H  LD+AE AAK L 
Sbjct: 469 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 528

Query: 485 ELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIKSVTHEF-RSG 544
           E +P +A  YV L++I AS +KW  VA VRK M+ +NV K PG SWIE+    H F R G
Sbjct: 529 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGG 588

Query: 545 DRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSEKLAIAFGLI 604
            + HPE   I   L + DG ++ AGY PD   VLHDV+EE K   L  HSE+LA+A+GL+
Sbjct: 589 IKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLL 648

Query: 605 KTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFCSCGDYW 660
           K   G PIRV KNLRVCGDCH AIK IS++ +REII+RD  RFHHF NG CSC DYW
Sbjct: 649 KLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704

BLAST of CmoCh06G008290 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 481.9 bits (1239), Expect = 8.4e-136
Identity = 239/606 (39.44%), Postives = 379/606 (62.54%), Query Frame = 0

Query: 68  SLNKSITNFVRAGDLESAHKVFDKMPVRTTV-TWNSILSGYTKVAGKMKE--AREVFDKI 127
           S+ KS T  +     ES H    ++ +   + T N++++ Y K+ G   +     VFD++
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169

Query: 128 PEPDSVS--YNIMLACYLRNCGVEAALAFFNTMPVKDIASWNTLISGFARHGQMKEAFDL 187
           P+  S S   ++     +   G+++    F  MP KD+ S+NT+I+G+A+ G  ++A  +
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229

Query: 188 FSVMP----EKNGVSWSAMISGYVEYGDLEAAEELY----KNAFIKSVVVETAMLTGYMK 247
              M     + +  + S+++  + EY D+   +E++    +      V + ++++  Y K
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289

Query: 248 FGKVELAERIFRRMAVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIETRARPNPSSMSSV 307
             ++E +ER+F R+  R+ ++WNS++AGYV+N R  + L+LF+ M+  + +P   + SSV
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349

Query: 308 LLCCSNLSALPMGRQVHNLVSKSPLSKDITACTSLISMYCKCGDLDSAWKLFVEMPLKDV 367
           +  C++L+ L +G+Q+H  V +     +I   ++L+ MY KCG++ +A K+F  M + D 
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409

Query: 368 ITWNAMISGYAQHGAGRKALHLFDEMRNGAMKPDWITFVAVLLACNHAGFVDLGVRYFKS 427
           ++W A+I G+A HG G +A+ LF+EM+   +KP+ + FVAVL AC+H G VD    YF S
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469

Query: 428 M-KEFGIEAKPDHYTCVIDLLGRAGKLDEAVSMINEMPFKPHAAIFGTLLGACRIHKNLD 487
           M K +G+  + +HY  V DLLGRAGKL+EA + I++M  +P  +++ TLL +C +HKNL+
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529

Query: 488 MAEFAAKNLLELDPKSATGYVQLANIYASTNKWDRVAKVRKMMKEHNVIKIPGYSWIEIK 547
           +AE  A+ +  +D ++   YV + N+YAS  +W  +AK+R  M++  + K P  SWIE+K
Sbjct: 530 LAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589

Query: 548 SVTHEFRSGDRIHPELTSIHNKLNELDGKMKVAGYVPDLEFVLHDVEEEHKEKLLLWHSE 607
           + TH F SGDR HP +  I+  L  +  +M+  GYV D   VLHDV+EEHK +LL  HSE
Sbjct: 590 NKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSE 649

Query: 608 KLAIAFGLIKTAPGTPIRVFKNLRVCGDCHRAIKFISEIEKREIIVRDTTRFHHFRNGFC 660
           +LA+AFG+I T PGT IRV KN+R+C DCH AIKFIS+I +REIIVRD +RFHHF  G C
Sbjct: 650 RLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNC 709

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M4P31.4e-24163.09Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop... [more]
Q9SY021.1e-15642.10Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Q56XI11.7e-14941.18Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop... [more]
Q9FXB97.6e-14242.21Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop... [more]
Q9LW631.2e-13439.44Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A6J1FUN80.0e+00100.00pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X1 ... [more]
A0A6J1KX440.0e+0096.85pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X1 ... [more]
A0A6J1FRC90.0e+0096.05pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X2 ... [more]
A0A6J1KST80.0e+0092.94pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X2 ... [more]
A0A5D3CKW00.0e+0086.25Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT4G16835.11.0e-24263.09Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02750.17.8e-15842.10Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G09410.11.2e-15041.18pentatricopeptide (PPR) repeat-containing protein [more]
AT1G56690.15.4e-14342.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G23330.18.4e-13639.44Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 352..399
e-value: 1.8E-12
score: 47.2
coord: 158..190
e-value: 2.1E-8
score: 34.2
coord: 252..298
e-value: 3.6E-8
score: 33.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 327..349
e-value: 1.2E-6
score: 28.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 426..450
e-value: 7.5E-5
score: 22.7
coord: 192..215
e-value: 2.8E-4
score: 20.9
coord: 74..93
e-value: 0.35
score: 11.2
coord: 98..124
e-value: 0.017
score: 15.3
coord: 226..251
e-value: 0.0017
score: 18.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 254..287
e-value: 1.1E-6
score: 26.4
coord: 162..191
e-value: 7.0E-7
score: 27.0
coord: 355..389
e-value: 1.1E-6
score: 26.4
coord: 427..450
e-value: 9.4E-5
score: 20.3
coord: 130..159
e-value: 0.0013
score: 16.7
coord: 192..215
e-value: 3.0E-4
score: 18.8
coord: 325..350
e-value: 9.9E-6
score: 23.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 353..387
score: 12.649398
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 11.23539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 159..193
score: 11.421732
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..352
score: 10.205028
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..131
score: 10.018685
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 143..218
e-value: 1.2E-19
score: 72.3
coord: 219..305
e-value: 4.0E-17
score: 64.1
coord: 306..403
e-value: 6.3E-26
score: 92.8
coord: 57..142
e-value: 9.0E-17
score: 63.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 405..571
e-value: 4.1E-14
score: 54.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 263..512
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 525..649
e-value: 1.1E-43
score: 148.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..52
NoneNo IPR availablePANTHERPTHR47925:SF113BNAC01G21360D PROTEINcoord: 28..594
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 28..594

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G008290.1CmoCh06G008290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding