CmoCh06G007700 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAGTGTTTTTTTTGCAGGTGAAATCATAATCCCTCCATTAATGGAGCTTCTAATTTCTTCTCTTTTAATTTTTAATATATTTTTTAATTTTTTTTATTGTGTTCGGAGGAATTGAGGTTGGAAAAGAAATGGGGTTTTGTTTTGATTGCAGAAAATTCTGTATGGAGGTACGAGAAGGGGAGGGTGGAAATGGGGTTACGGCGGCGGCTGAGTCAGATCCTTCGAGACCCGACACGACGGCTCCGGTACCGGAAGGTGGTGGTCCTGTAGGTTCTGCGGCTGTGGCGGCGAAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGATGGAAAGTTGAATGTGGCGGCGCTGTCACGGAAGGCAATATCAGGGTCGGCACTAGCACTGGCAGTGGCACCGGCGGCGGTGATTGATTTCTCGGCTGCGAAACGGGGGAAAGTGCGGCCGGCGAGTTGGTTGAGCAAAACCAAATATGAAGCGGAGAGTTTAGGTAATGAAATTTAATTACTTCTACTGATAGATGAACACGACCACCACGACCGTTCACTTTGAACCAAACATTTGAGAATTCTAGTGACATAACTAAGTTTAGGGCATGACTCTAATACGGTTGACATGACTAAGTTTAGGGCATGACTAGTGTAAGACAGTGTTAGTTAGATGAACACGACCCTCTACAACAACGACATGATATTGTCCACTTTGAACATAAACTCTCGTGGTTTTGTTTTGGGCTCTCCCAAATGGTCTTATACCAATGGAGATAGTATTCTTTGATTATAAACCCACGATCATTCCTAAGGAAAGAAGTATATATTGTAACGGTCTAGGCACTGAGTAGTGTGCTAACGGGGAAACTAAACCACTAAAGGGGTGTATTGTAAGATCTCACGTCGATTAGAGAGGAGAATGAAACATTTGATTTGGAAACGTTTCTACCTGAGACGAGTTATGTGCGATTTGGGTTGTTACTGATCAACAAGTTAAACTCAATTTATTTTATATATAAAATTTGAATTTAAGCAAAGAAATTAAAAAAACAAAAGGTGATTTTGATGTTATTAATTATTGACTTTGATTATTTTTGGTTTGGTAGCGGAATGGGTACCTTGCTCCGTTGGTGGTAATTTTACACCTCATATCATCGCTGTCAACTCGGGTGAGGTAACTCAATTATGTTAATTTTTTAAGGTTTAAGGTTAATGTTTCTATATTTCGATGTAACGATGAGATGTTTGTTATGTTACTTTAGGACATAACGATGAAGATTCTCTCATTTTCTCAACAAGGGCCTCGAGCCATATGCATTCTGTCTGCTAATGGTGTGATTTCGAGCGTCACTCTTCGTCAACCGAATTCTTCTGGAGGAACATTAACATATGAGGTTGTCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTTTATAATTTGCCATTGTTTCAGGAAGTGCAAATATGGTCATAGGTTAAGATACTCCTCTTTCCTTCTCAGGGTCGGTTCGAGATATTGTCGTTGTCAGGATCGTTCATCCCGAGTGACAATGCAGGAGCTAGGAGTCGAACTGGTGGAATGAGTGTTTCCTTAGCGAGTTCAGACGGACGTGTCTTTGGTGGTGGAGTTGTTGGTTTGTTAGTAGCTGCAAGTTCTATTCAAGTATAAATATCTCATTTTCTATCGGCTTGTTTTATGATGAACTTTTTGTATGGTGTCTATTTAGTCCGTAAACTTGTAAATTTCTTGAACCTAACAACTTTGAAAAATGTAGGTGGTAGTAGGAAGCTTTATATCAGGGAACCAACATGAACAAAAATCGAAGAAACCGAAACAAGACATTGTATTACCGGTTTCAGCTCTTCCGATATCCCCTGTTGAATTGAAGTCATACATGACAACAACGACAACGACAACGACAACAACGCCATCATTCCGTGCTGAGACTTGGTCACCTTTAGGGCTAGATTTGAGAAGTCAGCCAACCGATACGAACGTAAGTTAATTATTTTTTTAGTACCAAGTTCTCTCTTCGTCTTCTTGTTCATCTTGTTTGATATTTCAAGCTCCTATGTCCTAAATTCATTTTTTTGTGTTATACTCGGTGGACATTTTATTAACTTTATACCTTAAAAATAGTGGACATCGACC CTCAGTGTTTTTTTTGCAGAAAATTCTGTATGGAGGTACGAGAAGGGGAGGGTGGAAATGGGGTTACGGCGGCGGCTGAGTCAGATCCTTCGAGACCCGACACGACGGCTCCGGTACCGGAAGGTGGTGGTCCTGTAGGTTCTGCGGCTGTGGCGGCGAAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGATGGAAAGTTGAATGTGGCGGCGCTGTCACGGAAGGCAATATCAGGGTCGGCACTAGCACTGGCAGTGGCACCGGCGGCGGTGATTGATTTCTCGGCTGCGAAACGGGGGAAAGTGCGGCCGGCGAGTTGGTTGAGCAAAACCAAATATGAAGCGGAGAGTTTAGCGGAATGGGTACCTTGCTCCGTTGGTGGTAATTTTACACCTCATATCATCGCTGTCAACTCGGGTGAGGACATAACGATGAAGATTCTCTCATTTTCTCAACAAGGGCCTCGAGCCATATGCATTCTGTCTGCTAATGGTGTGATTTCGAGCGTCACTCTTCGTCAACCGAATTCTTCTGGAGGAACATTAACATATGAGGGTCGGTTCGAGATATTGTCGTTGTCAGGATCGTTCATCCCGAGTGACAATGCAGGAGCTAGGAGTCGAACTGGTGGAATGAGTGTTTCCTTAGCGAGTTCAGACGGACGTGTCTTTGGTGGTGGAGTTGTTGGTTTGTTAGTAGCTGCAAGTTCTATTCAAGTGGTAGTAGGAAGCTTTATATCAGGGAACCAACATGAACAAAAATCGAAGAAACCGAAACAAGACATTGTATTACCGGTTTCAGCTCTTCCGATATCCCCTGTTGAATTGAAGTCATACATGACAACAACGACAACGACAACGACAACAACGCCATCATTCCGTGCTGAGACTTGGTCACCTTTAGGGCTAGATTTGAGAAGTCAGCCAACCGATACGAACGTAAGTTAATTATTTTTTTAGTACCAAGTTCTCTCTTCGTCTTCTTGTTCATCTTGTTTGATATTTCAAGCTCCTATGTCCTAAATTCATTTTTTTGTGTTATACTCGGTGGACATTTTATTAACTTTATACCTTAAAAATAGTGGACATCGACC ATGGAGGTACGAGAAGGGGAGGGTGGAAATGGGGTTACGGCGGCGGCTGAGTCAGATCCTTCGAGACCCGACACGACGGCTCCGGTACCGGAAGGTGGTGGTCCTGTAGGTTCTGCGGCTGTGGCGGCGAAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGATGGAAAGTTGAATGTGGCGGCGCTGTCACGGAAGGCAATATCAGGGTCGGCACTAGCACTGGCAGTGGCACCGGCGGCGGTGATTGATTTCTCGGCTGCGAAACGGGGGAAAGTGCGGCCGGCGAGTTGGTTGAGCAAAACCAAATATGAAGCGGAGAGTTTAGCGGAATGGGTACCTTGCTCCGTTGGTGGTAATTTTACACCTCATATCATCGCTGTCAACTCGGGTGAGGACATAACGATGAAGATTCTCTCATTTTCTCAACAAGGGCCTCGAGCCATATGCATTCTGTCTGCTAATGGTGTGATTTCGAGCGTCACTCTTCGTCAACCGAATTCTTCTGGAGGAACATTAACATATGAGGGTCGGTTCGAGATATTGTCGTTGTCAGGATCGTTCATCCCGAGTGACAATGCAGGAGCTAGGAGTCGAACTGGTGGAATGAGTGTTTCCTTAGCGAGTTCAGACGGACGTGTCTTTGGTGGTGGAGTTGTTGGTTTGTTAGTAGCTGCAAGTTCTATTCAAGTGGTAGTAGGAAGCTTTATATCAGGGAACCAACATGAACAAAAATCGAAGAAACCGAAACAAGACATTGTATTACCGGTTTCAGCTCTTCCGATATCCCCTGTTGAATTGAAGTCATACATGACAACAACGACAACGACAACGACAACAACGCCATCATTCCGTGCTGAGACTTGGTCACCTTTAGGGCTAGATTTGAGAAGTCAGCCAACCGATACGAACGTAAGTTAA MEVREGEGGNGVTAAAESDPSRPDTTAPVPEGGGPVGSAAVAAKKKRGRPRKYGPDGKLNVAALSRKAISGSALALAVAPAAVIDFSAAKRGKVRPASWLSKTKYEAESLAEWVPCSVGGNFTPHIIAVNSGEDITMKILSFSQQGPRAICILSANGVISSVTLRQPNSSGGTLTYEGRFEILSLSGSFIPSDNAGARSRTGGMSVSLASSDGRVFGGGVVGLLVAASSIQVVVGSFISGNQHEQKSKKPKQDIVLPVSALPISPVELKSYMTTTTTTTTTTPSFRAETWSPLGLDLRSQPTDTNVS Homology
BLAST of CmoCh06G007700 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 9.8e-76 Identity = 180/325 (55.38%), Postives = 219/325 (67.38%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy Swiss-Prot
Match: O49658 (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 6.2e-62 Identity = 149/292 (51.03%), Postives = 186/292 (63.70%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 7.6e-52 Identity = 142/297 (47.81%), Postives = 178/297 (59.93%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy Swiss-Prot
Match: Q9SB31 (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.3e-51 Identity = 119/218 (54.59%), Postives = 145/218 (66.51%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy Swiss-Prot
Match: Q9LVB0 (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.7e-51 Identity = 132/289 (45.67%), Postives = 175/289 (60.55%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy TrEMBL
Match: A0A6J1FT38 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111448214 PE=4 SV=1) HSP 1 Score: 578.6 bits (1490), Expect = 1.6e-161 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy TrEMBL
Match: A0A6J1FXU2 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111448214 PE=4 SV=1) HSP 1 Score: 578.6 bits (1490), Expect = 1.6e-161 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy TrEMBL
Match: A0A6J1KT94 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111498457 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144 Identity = 282/308 (91.56%), Postives = 289/308 (93.83%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy TrEMBL
Match: A0A6J1EBD3 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111431031 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 2.2e-123 Identity = 247/307 (80.46%), Postives = 263/307 (85.67%), Query Frame = 0
BLAST of CmoCh06G007700 vs. ExPASy TrEMBL
Match: A0A6J1HMV1 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111465078 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.7e-121 Identity = 240/307 (78.18%), Postives = 261/307 (85.02%), Query Frame = 0
BLAST of CmoCh06G007700 vs. TAIR 10
Match: AT4G12080.1 (AT-hook motif nuclear-localized protein 1 ) HSP 1 Score: 285.0 bits (728), Expect = 7.0e-77 Identity = 180/325 (55.38%), Postives = 219/325 (67.38%), Query Frame = 0
BLAST of CmoCh06G007700 vs. TAIR 10
Match: AT4G22770.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 239.2 bits (609), Expect = 4.4e-63 Identity = 149/292 (51.03%), Postives = 186/292 (63.70%), Query Frame = 0
BLAST of CmoCh06G007700 vs. TAIR 10
Match: AT4G00200.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 205.7 bits (522), Expect = 5.4e-53 Identity = 142/297 (47.81%), Postives = 178/297 (59.93%), Query Frame = 0
BLAST of CmoCh06G007700 vs. TAIR 10
Match: AT4G25320.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 204.9 bits (520), Expect = 9.2e-53 Identity = 119/218 (54.59%), Postives = 145/218 (66.51%), Query Frame = 0
BLAST of CmoCh06G007700 vs. TAIR 10
Match: AT5G62260.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52 Identity = 132/289 (45.67%), Postives = 175/289 (60.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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