CmoCh06G007630 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G007630
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr06: 3957547 .. 3958121 (+)
RNA-Seq ExpressionCmoCh06G007630
SyntenyCmoCh06G007630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGTTCATTCTGTGCATCAAAATCCTTGTTGTGCTTGGTAAGAGCTTGCTTTGTCCAGCGTTTTAGGTCATAAGCCTTTTTGAAGGGTCTCCTGTCCTTTATAAGTCTCCTCTTTGTGATAGCAATGGCCAGGTCATTGGGGAACAGTGTCTTCCAAACAAAAGCATGGAGGAGAGTAGAGACAAAGAGAAGGGACACCATGGTAGAGGACATGAAAGAAAGGGCAAGTGCCAGTCCTTTACTTACAACTGTAGGGACATGCTCTGCATACTTTATGGTCGCCACTGAAGCAGTTGTCATTGAAAATGTGTAAGACCACCAAGCCACTGAAAACCTGTAAAAGTTCACATGTTTTCAGGTATAATAATTGTATTGATCTGTTGTAATGCAAATTCTGATGTCTATTTTGTTTTTCATTCAGTGATGGTGTGATCCAAGGCAGTCTCTTGGGTTTGATGGACAGTGGCTGTTCACATGGGGGAAAACTACAAAAAGTACGTTCTCTGGATTCTCTATGGATATGCTTATTTTATATAATATGCATATGAAATTTCTAAAAGTAGGTTCTATGA

mRNA sequence

ATGCTGTTCATTCTGTGCATCAAAATCCTTGTTGTGCTTGCAATGGCCAGGTCATTGGGGAACAGTGTCTTCCAAACAAAAGCATGGAGGAGAGTAGAGACAAAGAGAAGGGACACCATGGTAGAGGACATGAAAGAAAGGGCAAGTGCCAGTCCTTTACTTACAACTGTAGGGACATGCTCTGCATACTTTATGGTCGCCACTGAAGCAGTTGTCATTGAAAATGTTGATGGTGTGATCCAAGGCAGTCTCTTGGGTTTGATGGACAGTGGCTGTTCACATGGGGGAAAACTACAAAAAGTTCTATGA

Coding sequence (CDS)

ATGCTGTTCATTCTGTGCATCAAAATCCTTGTTGTGCTTGCAATGGCCAGGTCATTGGGGAACAGTGTCTTCCAAACAAAAGCATGGAGGAGAGTAGAGACAAAGAGAAGGGACACCATGGTAGAGGACATGAAAGAAAGGGCAAGTGCCAGTCCTTTACTTACAACTGTAGGGACATGCTCTGCATACTTTATGGTCGCCACTGAAGCAGTTGTCATTGAAAATGTTGATGGTGTGATCCAAGGCAGTCTCTTGGGTTTGATGGACAGTGGCTGTTCACATGGGGGAAAACTACAAAAAGTTCTATGA

Protein sequence

MLFILCIKILVVLAMARSLGNSVFQTKAWRRVETKRRDTMVEDMKERASASPLLTTVGTCSAYFMVATEAVVIENVDGVIQGSLLGLMDSGCSHGGKLQKVL
Homology
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BLAST of CmoCh06G007630 vs. ExPASy TrEMBL
Match: A0A426ZYF4 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00033325 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 0 

Query: 13 LAMARSLGNSVFQTKAWRRVETKRRDTMVEDMKERASASPLLTTVGTCSAYFMVATEAVV 72
          +A+ARS GN   QT A RRV    RDTM+EDM +R +A PLL   GT SAY MVATEAVV
Sbjct: 1  MAIARSFGNKDRQTNACRRVHRNNRDTMIEDMSDRLNARPLLKAHGTSSAYLMVATEAVV 60

Query: 73 IENV 77
          I NV
Sbjct: 61 IGNV 64

The following BLAST results are available for this feature:
BLAST of CmoCh06G007630 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh06G007630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A426ZYF41.2e-0962.50Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00033325 PE=4 SV=1[more]
BLAST of CmoCh06G007630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G007630.1CmoCh06G007630.1mRNA