CmoCh06G007010 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGAATTCCATGCTGTGAGAAGGAAAATGTTAAGAGAGGACAGTGGACGCCTGAAGAAGATAACAAGCTCTCTTCCTACATTTCTCAGCATGGCACTCGCAACTGGCGCCTCATACCCAAGAATGCTGGTATAACTCTCTCCCTTTAGAACATTTGAAATCGTTTTAATTACTCAATGCCTAATGCTGCGATGACATTCAGGTCTCCAAAGATGTGGGAAGAGCTGCAGGCTACGTTGGACGAATTACCTGCGCCCCGACCTCAAGCATGGCCAATTTTCGGATATGGAAGAGCAAACTATTGTCAAGCTACATTCTGTTGTTGGGAACAGGTTCACCACCTTCTTCATATCAGCATTGCTTGTCAATCATCAAAATGAATTTGTACTAAATAAGATGACCGATCTCGACCCCGCAGGTGGTCTCTGATTGCAGCTCAGTTACCTGGCCGCACCGACAATGATGTCAAGAATCACTGGAACACTAAGCTGAAGAAGAAGCTATCAGGTATGGGCATTGATCCAGTTACTCACAAACCATTTTCCCATCTAATGGCTGAAATCGCCACCACTTTAGCCCCTCCACAAGTTGCCCATCTTGCTGAGGCTGCGCTTGGCTGCTTCAAAGACGAAATGCTTCACCTTCTTACTAAGAAGTGTGTTGACTTCCAGCTCCAACAGGCCAATGTACCGCCGGGAAGTTCCTCAGGAACTTATAATCACAACAACCAAAATGAGAAAGATGGTACTGTCGAGAATATCAAACTTGGTTTGTCAAGAGCCATTCAACAGTCTGATCTGATCACTCCATATAAGCCTTGGAATTCTACTGATGCAACAACAACGAACTTGGAGGGGACAAGCAATTGCTTCCCGGCATCAACGTCAGGATTTCAATACCCGCCGCCCTCGTTTGGCAATGAAGGGGACGTGCCATCATGGAGCCAGAGCATGTGTACGGGGAGTACATGCACTGGAGGAGAACAACAGGGGCAACTGCATGAAATCCTTGAAGAACACGGAGAGGAGCTATCAGAGGGTGGAAAAGAGATGAGAAATGGGACAAGTATATTCAGTTCAGACTCTGTGTTGTGGGATTTGCCATGTGATGATCTGATGAATCCAATAGTATGAAGAAATTGGCACCAAAATCCCAAATAAATTCTATCATCAAATGATACAATTGTGAATAGAGGTTACTCCAGTTGTGGCCCTTCATTGTATGAATCAGAGTTCTTCACAGAATCTGTTTAGTCCGAAGAATAAGGAAGCAACTGAATTAGCTCAGCATAATCTGTAGAACTCCCCCTTTCTATTTACAACAACATTACAACAATTCCTACACATGCCAAATATGGTTTAAGATAATAGAACTTAACAAACTACTGGTTGAGGTATGAGTTTCTTCTCTTAGATTCATTTAATTTCAGTCTTTTATCCTTCTAAGGTTTTATTCTGAGTTTCTATTTTTAATGTTTTTCAAATGGTAAGTTTGTATAGTTTGTTTCACTCAAAATGATTCCATTAATGGCAAATCAGTATATTAACTACTACTAACCACGGTTTATAGGGAGAAACTGGAGCGGTTGCTTGCAATGGTTGTTCGAGTTATCGTTGTAGATGGTTGATGGAGGCGGTCGTCGATGGTGAGTAGTGGTCACCGGAGATGGTCACTAGAAGTGGACGCTGGAGATAGAGGAGCCATTTTGAAAGTGGATGTTGTATTATTTGTTCATTTAATTTTGGGGGAAAAGCTTAAGTAGCGAGTATACGTCAACAATCTTAGTAGTGTCCTAGATTGGTTCGAACTAGACTTTCTTGGTCAAAACATAAACATTATTACATTCAACTTCTTTCGCG ATGGGGAGAATTCCATGCTGTGAGAAGGAAAATGTTAAGAGAGGACAGTGGACGCCTGAAGAAGATAACAAGCTCTCTTCCTACATTTCTCAGCATGGCACTCGCAACTGGCGCCTCATACCCAAGAATGCTGGTCTCCAAAGATGTGGGAAGAGCTGCAGGCTACGTTGGACGAATTACCTGCGCCCCGACCTCAAGCATGGCCAATTTTCGGATATGGAAGAGCAAACTATTGTCAAGCTACATTCTGTTGTTGGGAACAGGTTCACCACCTTCTTCATATCAGCATTGCTTGTCAATCATCAAAATGAATTTGTACTAAATAAGATGACCGATCTCGACCCCGCAGCTCAGTTACCTGGCCGCACCGACAATGATGTCAAGAATCACTGGAACACTAAGCTGAAGAAGAAGCTATCAGGTATGGGCATTGATCCAGTTACTCACAAACCATTTTCCCATCTAATGGCTGAAATCGCCACCACTTTAGCCCCTCCACAAGTTGCCCATCTTGCTGAGGCTGCGCTTGGCTGCTTCAAAGACGAAATGCTTCACCTTCTTACTAAGAAGTGTGTTGACTTCCAGCTCCAACAGGCCAATGTACCGCCGGGAAGTTCCTCAGGAACTTATAATCACAACAACCAAAATGAGAAAGATGGTACTGTCGAGAATATCAAACTTGGTTTGTCAAGAGCCATTCAACAGTCTGATCTGATCACTCCATATAAGCCTTGGAATTCTACTGATGCAACAACAACGAACTTGGAGGGGACAAGCAATTGCTTCCCGGCATCAACGTCAGGATTTCAATACCCGCCGCCCTCGTTTGGCAATGAAGGGGACGTGCCATCATGGAGCCAGAGCATGTGTACGGGGAGTACATGCACTGGAGGAGAACAACAGGGGCAACTGCATGAAATCCTTGAAGAACACGGAGAGGAGCTATCAGAGGGTGGAAAAGAGATGAGAAATGGGACAAGTATATTCAGTTCAGACTCTGTGTTGTGGGATTTGCCATGTGATGATCTGATGAATCCAATAGGAGAAACTGGAGCGGTTGCTTGCAATGGTTGTTCGAGTTATCGTTGTAGATGGTTGATGGAGGCGGTCGTCGATGGTGAGTAGTGGTCACCGGAGATGGTCACTAGAAGTGGACGCTGGAGATAGAGGAGCCATTTTGAAAGTGGATGTTGTATTATTTGTTCATTTAATTTTGGGGGAAAAGCTTAAGTAGCGAGTATACGTCAACAATCTTAGTAGTGTCCTAGATTGGTTCGAACTAGACTTTCTTGGTCAAAACATAAACATTATTACATTCAACTTCTTTCGCG ATGGGGAGAATTCCATGCTGTGAGAAGGAAAATGTTAAGAGAGGACAGTGGACGCCTGAAGAAGATAACAAGCTCTCTTCCTACATTTCTCAGCATGGCACTCGCAACTGGCGCCTCATACCCAAGAATGCTGGTCTCCAAAGATGTGGGAAGAGCTGCAGGCTACGTTGGACGAATTACCTGCGCCCCGACCTCAAGCATGGCCAATTTTCGGATATGGAAGAGCAAACTATTGTCAAGCTACATTCTGTTGTTGGGAACAGGTTCACCACCTTCTTCATATCAGCATTGCTTGTCAATCATCAAAATGAATTTGTACTAAATAAGATGACCGATCTCGACCCCGCAGCTCAGTTACCTGGCCGCACCGACAATGATGTCAAGAATCACTGGAACACTAAGCTGAAGAAGAAGCTATCAGGTATGGGCATTGATCCAGTTACTCACAAACCATTTTCCCATCTAATGGCTGAAATCGCCACCACTTTAGCCCCTCCACAAGTTGCCCATCTTGCTGAGGCTGCGCTTGGCTGCTTCAAAGACGAAATGCTTCACCTTCTTACTAAGAAGTGTGTTGACTTCCAGCTCCAACAGGCCAATGTACCGCCGGGAAGTTCCTCAGGAACTTATAATCACAACAACCAAAATGAGAAAGATGGTACTGTCGAGAATATCAAACTTGGTTTGTCAAGAGCCATTCAACAGTCTGATCTGATCACTCCATATAAGCCTTGGAATTCTACTGATGCAACAACAACGAACTTGGAGGGGACAAGCAATTGCTTCCCGGCATCAACGTCAGGATTTCAATACCCGCCGCCCTCGTTTGGCAATGAAGGGGACGTGCCATCATGGAGCCAGAGCATGTGTACGGGGAGTACATGCACTGGAGGAGAACAACAGGGGCAACTGCATGAAATCCTTGAAGAACACGGAGAGGAGCTATCAGAGGGTGGAAAAGAGATGAGAAATGGGACAAGTATATTCAGTTCAGACTCTGTGTTGTGGGATTTGCCATGTGATGATCTGATGAATCCAATAGGAGAAACTGGAGCGGTTGCTTGCAATGGTTGTTCGAGTTATCGTTGTAGATGGTTGATGGAGGCGGTCGTCGATGGTGAGTAG MGRIPCCEKENVKRGQWTPEEDNKLSSYISQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDMEEQTIVKLHSVVGNRFTTFFISALLVNHQNEFVLNKMTDLDPAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQVAHLAEAALGCFKDEMLHLLTKKCVDFQLQQANVPPGSSSGTYNHNNQNEKDGTVENIKLGLSRAIQQSDLITPYKPWNSTDATTTNLEGTSNCFPASTSGFQYPPPSFGNEGDVPSWSQSMCTGSTCTGGEQQGQLHEILEEHGEELSEGGKEMRNGTSIFSSDSVLWDLPCDDLMNPIGETGAVACNGCSSYRCRWLMEAVVDGE Homology
BLAST of CmoCh06G007010 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2) HSP 1 Score: 339.3 bits (869), Expect = 5.4e-92 Identity = 206/395 (52.15%), Postives = 243/395 (61.52%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-88 Identity = 190/359 (52.92%), Postives = 224/359 (62.40%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy Swiss-Prot
Match: Q9LSI7 (Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.0e-50 Identity = 93/158 (58.86%), Postives = 109/158 (68.99%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.4e-47 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy Swiss-Prot
Match: Q9LDR8 (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 5.2e-47 Identity = 90/164 (54.88%), Postives = 112/164 (68.29%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy TrEMBL
Match: A0A6J1G5F2 (transcription factor MYB80-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450986 PE=4 SV=1) HSP 1 Score: 660.6 bits (1703), Expect = 3.9e-186 Identity = 320/347 (92.22%), Postives = 322/347 (92.80%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy TrEMBL
Match: A0A6J1KXH4 (transcription factor MYB80-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498448 PE=4 SV=1) HSP 1 Score: 641.7 bits (1654), Expect = 1.9e-180 Identity = 312/347 (89.91%), Postives = 316/347 (91.07%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy TrEMBL
Match: A0A6J1CQS6 (transcription factor MYB80 OS=Momordica charantia OX=3673 GN=LOC111013345 PE=4 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 2.3e-170 Identity = 298/347 (85.88%), Postives = 310/347 (89.34%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy TrEMBL
Match: A0A6J1G558 (transcription factor MYB80-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450986 PE=4 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 4.8e-168 Identity = 297/347 (85.59%), Postives = 299/347 (86.17%), Query Frame = 0
BLAST of CmoCh06G007010 vs. ExPASy TrEMBL
Match: A0A5D3D717 (Myb-related protein 308 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00050 PE=4 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 6.0e-163 Identity = 286/347 (82.42%), Postives = 301/347 (86.74%), Query Frame = 0
BLAST of CmoCh06G007010 vs. TAIR 10
Match: AT5G56110.1 (myb domain protein 103 ) HSP 1 Score: 328.2 bits (840), Expect = 8.8e-90 Identity = 190/359 (52.92%), Postives = 224/359 (62.40%), Query Frame = 0
BLAST of CmoCh06G007010 vs. TAIR 10
Match: AT3G28470.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 200.7 bits (509), Expect = 2.1e-51 Identity = 93/158 (58.86%), Postives = 109/158 (68.99%), Query Frame = 0
BLAST of CmoCh06G007010 vs. TAIR 10
Match: AT4G05100.1 (myb domain protein 74 ) HSP 1 Score: 191.8 bits (486), Expect = 9.8e-49 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 0
BLAST of CmoCh06G007010 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 ) HSP 1 Score: 189.9 bits (481), Expect = 3.7e-48 Identity = 90/164 (54.88%), Postives = 112/164 (68.29%), Query Frame = 0
BLAST of CmoCh06G007010 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 ) HSP 1 Score: 189.5 bits (480), Expect = 4.9e-48 Identity = 92/189 (48.68%), Postives = 117/189 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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