CmoCh06G006950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G006950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Vacuolar cation/proton exchanger
Location	Cmo_Chr06: 3530060 .. 3532875 (+)
RNA-Seq Expression	CmoCh06G006950
Synteny	CmoCh06G006950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACAGACGTGAAAAGCACACAGAGACAGTCGTCGGAAGAACACCAACGCTTCAAATTTCGAAGCAATTCGGTGTTCTATCTCTTCTCTGTCGAGTGAATAGCGCACTGTCATCATAAAGCTTCATCGGATTTCTTTACACGTCGTAGCATTTTTGAGCTCTGGAACGTACAAAATTTGTCACTCTTCTGTTGGTTCTGGGTTAGTCGATCAACGACAATCGAACCTTGTCTTTTGGTTTCTTCGTATTCAGGTCGATTCTTCACGAGATTCTTGCTAACCTGAGTTCGCTTCAGCTCTTTTCAACCTCTATTTGTTTCGCTTTTATCCACTAATTACGGTAAATCACAACGAACTTTGTCTTCTTCTAAATTTGAGTTGGATATTGTATGCTTGAAGTAGAACAATTTGAATGTTAGCTGTTGCTTTCTTCGGCCTCGAATTTCGGTTCGTATTTGTTTTCTTTTGCTTGGATCGAGAGCAGAGGACTGGTGAATTCATGGATTAGGTTCTGAACTTTTGATTCTAGTCCATGTGGATTCAGCTCTTGGTGTTTAATTTGGATTACCTCATATATAACCTTGATTCAATTGTTGGTGATGTGGTTGATCCTTTTGTACAGTTTTGAATTTAGAACAAATATGATTCTCTATAGGTTGATACATGTGCATGGATATAGTGGAGGTTTTCTGGACTTGTATTAATAGGATATTCAAACTAATCAGCTGCATAAATACTTTTATATTTGGAAATCTATATTAATCTCAACACAAATATATTGGCAAATCATGTTTTGTTCTCTGTTCCTCTGTTATATGGCTATTGATTTTGAAGGATTCTTGCTTTTACGTATGGCTTCCTTGTATGGTAATAATATAAGGGTTGGATGAGGAGAACCTTTATAAGGGGTTCAGTAACTGAGGTTTTAAGGGTGCAGCCTTTATTTTTTTTCCTTAAAAGAATGAAGGATGCTGTCTATTAATGCTGTCGTATATGAATCAGTTCTGGAAGGTTTCAAGTTGGTACGAGAATGTCGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGTCTTTTGGGCCGCTAGCAATTCTTGTGGATAAGTTGACTGGACACAATGTAAGTTAAAGACGTCACTGTTGGGTATGAATTTATATCAGTTATGGGTTATGTCTTTGTTGAGGTCTTTATGTGGATTACAGAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCGTTCGCTGAGCGGTTAGGTTATGCGACAGAGTAAGGACTTCAGGATCTCACATTTAATGCTAAATTTCTACTGGTTTTTTTTTTTTTCTTTTTAATCTAAAAAGCTTTTTGCAGCTCATCTAATTTTTCCCTTGAAACAGGCAGCTGGCTTTTTACACTGGGCCTACAGGTTGAGTCTCGATCTCAATTTGTCACGACTATGATTTTCTGAGTTCTTTTGATATTTGGAGTTAAGAAACCTGTTCATGGGATGTTTATGAGTTTATATAGCTTTTCTTTTTGACACTGGGATAACTTATGATGATTGTATGTTCAATGATATGCCTTAGGTGTTGTAAAATATCTGCAACTGCAAAAATGTTCTTTTTGCACTGTAACTTCTGGTGCTGATTCATCTGTTGCCATTAGTCTACTGAATCAGTACAATCCTGAGAAGGGGAGGGAGAGGGGGAGGGAGGGTGCTGTCGTAGTGTACTATATACAAATTATCGTAGTTGTGAAAATCTCATGTGTATTTGGTAGGAAAAACATTAGTGTGCACATACGCACATCAATGAAAAAGTAATTACAGAGGTATAAGGGGATCAAGCGTCCCCTTAACCGTGTAAAAAAGTGGTAAACCTTTCGTATTCTGATTAGGCGAAGTTTTCCTTTTCAATTAACCATTCTTCCATATGCACAGCTGTTTCATGTCTATTCTGTTTTCTTTTGGATTTGGTTATAATGATCCATTATTTGTTAAATTTTCTCCACTCACTTGACGATTGAATCTGCAGTTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGTATAAAGGTTTCAGTTTCACCCCAACCCAGGAATGGCTTTTCCTTTTACCTATTAGTTTTTAAGCTACTTTTTGTGCTAAAGCTGAAATTTCATGTAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTTCAGTTAAAAAGTCAGAGGAATAATTATTCTTCCGTTTATGAGGTTAATTATGTTATTTTGGTCTTTCTTTTGAAGTTATGCATCATCATGGAAGATAATTTGTGCTGTCTTCTGCATAATACTATACCAATGTAGAGGGTCGTTGTTTCTATAAGTGGTATTAGAGTTATACACGGGTATCAGAGTCGTGCACTTATCTTAAAAAAGAACGTAAACACGTGCAACTCATGCCGTTACAATTTGTGGACCCCAATACTTTGTTTGAGAATTTGTCTTTTATTTTCTTTGGGCATAACAACCCATCC

mRNA sequence

AAGACAGACGTGAAAAGCACACAGAGACAGTCGTCGGAAGAACACCAACGCTTCAAATTTCGAAGCAATTCGGTGTTCTATCTCTTCTCTGTCGAGTGAATAGCGCACTGTCATCATAAAGCTTCATCGGATTTCTTTACACGTCGTAGCATTTTTGAGCTCTGGAACGTACAAAATTTGTCACTCTTCTGTTGGTTCTGGGTTAGTCGATCAACGACAATCGAACCTTGTCTTTTGGTTTCTTCGTATTCAGGTCGATTCTTCACGAGATTCTTGCTAACCTGAGTTCGCTTCAGCTCTTTTCAACCTCTATTTGTTTCGCTTTTATCCACTAATTACGTTCTGGAAGGTTTCAAGTTGGTACGAGAATGTCGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGTCTTTTGGGCCGCTAGCAATTCTTGTGGATAAGTTGACTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCGTTCGCTGAGCGGTTAGGTTATGCGACAGAGCAGCTGGCTTTTTACACTGGGCCTACAGTTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTTCAGTTAAAAAGTCAGAGGAATAATTATTCTTCCGTTTATGAGGTTAATTATGTTATTTTGGTCTTTCTTTTGAAGTTATGCATCATCATGGAAGATAATTTGTGCTGTCTTCTGCATAATACTATACCAATGTAGAGGGTCGTTGTTTCTATAAGTGGTATTAGAGTTATACACGGGTATCAGAGTCGTGCACTTATCTTAAAAAAGAACGTAAACACGTGCAACTCATGCCGTTACAATTTGTGGACCCCAATACTTTGTTTGAGAATTTGTCTTTTATTTTCTTTGGGCATAACAACCCATCC

Coding sequence (CDS)

ATGTCGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGTCTTTTGGGCCGCTAGCAATTCTTGTGGATAAGTTGACTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCGTTCGCTGAGCGGTTAGGTTATGCGACAGAGCAGCTGGCTTTTTACACTGGGCCTACAGTTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTTCAGTTAAAAAGTCAGAGGAATAATTATTCTTCCGTTTATGAGGTTAATTATGTTATTTTGGTCTTTCTTTTGAAGTTATGCATCATCATGGAAGATAATTTGTGCTGTCTTCTGCATAATACTATACCAATGTAG

Protein sequence

MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKSQRNNYSSVYEVNYVILVFLLKLCIIMEDNLCCLLHNTIPM

Homology

[Close]

BLAST of CmoCh06G006950 vs. ExPASy Swiss-Prot
Match: Q39254 (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=CAX2 PE=1 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-80
Identity = 157/200 (78.50%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 9   SVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYT 68
           S+KIVIF NKLN L+ FGPLAILV  +     WVF L+L+GI P AERLGYATEQLA YT
Sbjct: 67  SIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYT 126

Query: 69  GPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVF 128
           GPTVGGLLNATFGN TELIISIFALKN MIRVVQL+LLGSILSNMLLVLGCAFFCGGLVF
Sbjct: 127 GPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVF 186

Query: 129 NKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAY 188
            +K+Q F+K  A VNSGLLLMAVMG+LFP +L+YTHSE H G SELALSRFSSCIML+AY
Sbjct: 187 YQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHYTHSEVHAGSSELALSRFSSCIMLIAY 246

Query: 189 AAYLFFQLKSQRNNYSSVYE 209
           AAYLFFQLKSQ N+YS + E
Sbjct: 247 AAYLFFQLKSQSNSYSPLDE 266

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BLAST of CmoCh06G006950 vs. ExPASy Swiss-Prot
Match: Q8L783 (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-79
Identity = 156/201 (77.61%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 8   KSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFY 67
           +S KIVI SNKLN L+ FGPLAIL+  LT +  W+F LSL+GI P AERLGYATEQLA Y
Sbjct: 66  QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query: 68  TGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLV 127
           TG TVGGLLNATFGN TELIISIFALK+ MIRVVQL+LLGSILSNMLLVLGCAFFCGGLV
Sbjct: 126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query: 128 FNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLA 187
           F++KEQ F+K  A VNSGLLLMAVMGLLFP +L+YTHSE H G SELALSRFSSCIML+A
Sbjct: 186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query: 188 YAAYLFFQLKSQRNNYSSVYE 209
           YAAYLFFQLKSQ ++Y+ + E
Sbjct: 246 YAAYLFFQLKSQPSSYTPLTE 266

[Close]

BLAST of CmoCh06G006950 vs. ExPASy Swiss-Prot
Match: Q5KQN0 (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2)

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-74
Identity = 144/204 (70.59%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 6   AYKSVKIVIFSNKLNFLMSFGPLAILVDKLT-GHNSWVFFLSLLGIIPFAERLGYATEQL 65
           A  SV++VI   K+N L+ FGPLA+++  L+  H  WVF  SL+GI P AERLGYATEQL
Sbjct: 60  ALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQL 119

Query: 66  AFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCG 125
           A YTGPT+GGLLNATFGNATE+IIS++ALKN MIRVVQ SLLGSILSNMLLVLGCAFF G
Sbjct: 120 ALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAG 179

Query: 126 GLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIM 185
           GLV   ++Q FNKA+A VNSGLLLMAV+GL+FP +L++THSE  +GKSE++LSRFSSCIM
Sbjct: 180 GLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQYGKSEVSLSRFSSCIM 239

Query: 186 LLAYAAYLFFQLKSQRNNYSSVYE 209
           L+AYA+YLFFQLKSQR+ YS + E
Sbjct: 240 LVAYASYLFFQLKSQRSLYSPIGE 263

[Close]

BLAST of CmoCh06G006950 vs. ExPASy Swiss-Prot
Match: Q9LFZ8 (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana OX=3702 GN=CAX6 PE=3 SV=3)

HSP 1 Score: 279.3 bits (713), Expect = 4.2e-74
Identity = 149/197 (75.63%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 8   KSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFY 67
           +S KIVI SNKLN L+ FGPLAILV  LT +  W F LSL+GI P AERLGYATEQL+ Y
Sbjct: 77  QSFKIVILSNKLNLLLPFGPLAILVHYLTDNKGWFFLLSLVGITPLAERLGYATEQLSCY 136

Query: 68  TGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLV 127
           TG TVGGLLNATFGN  ELIISI ALKN MIRVVQL+LLGSILSN+LLVLGCAFFCGGLV
Sbjct: 137 TGATVGGLLNATFGNVIELIISIIALKNGMIRVVQLTLLGSILSNILLVLGCAFFCGGLV 196

Query: 128 FNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLA 187
           F  K+Q F+K  A V+SG+LLMAVMGLLFP  L+YTHSE H G SELALSRF SCIML+A
Sbjct: 197 FPGKDQVFDKRNAVVSSGMLLMAVMGLLFPTFLHYTHSEVHAGSSELALSRFISCIMLVA 256

Query: 188 YAAYLFFQLKSQRNNYS 205
           YAAYLFFQLKSQ + Y+
Sbjct: 257 YAAYLFFQLKSQPSFYT 273

[Close]

BLAST of CmoCh06G006950 vs. ExPASy Swiss-Prot
Match: Q6K1C4 (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2)

HSP 1 Score: 269.2 bits (687), Expect = 4.3e-71
Identity = 137/201 (68.16%), Postives = 166/201 (82.59%), Query Frame = 0


Query: 6   AYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLA 65
           A +S++IVIF++KLN L+ FGP +I++   T  +  VF  S+LGI P AERLGYATEQLA
Sbjct: 40  ALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLA 99

Query: 66  FYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGG 125
            YTGPTVGGLLNATFGNATE+II+I+ALKN MIRVVQ SLLGSILSNMLLV+GCAFF GG
Sbjct: 100 IYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGG 159

Query: 126 LVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIML 185
           +V   K+Q F+KA A VNSGLLLMAVMGL+FP +L++THSE   G SE++LSRFSSCIML
Sbjct: 160 IVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIML 219

Query: 186 LAYAAYLFFQLKSQRNNYSSV 207
           +AYA+YL+FQL  + N YS +
Sbjct: 220 VAYASYLYFQLSGRNNAYSPI 240

[Close]

BLAST of CmoCh06G006950 vs. ExPASy TrEMBL
Match: A0A6J1KUZ3 (Vacuolar cation/proton exchanger OS=Cucurbita maxima OX=3661 GN=LOC111498424 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.8e-108
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA 60
           MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA
Sbjct: 1   MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA 60

Query: 61  TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA 120
           TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA
Sbjct: 61  TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA 120

Query: 121 FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS 180
           FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS
Sbjct: 121 FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS 180

Query: 181 SCIMLLAYAAYLFFQLKSQRNNYSSVYE 209
           SCIMLLAYAAYLFFQLKSQRNNYSSVYE
Sbjct: 181 SCIMLLAYAAYLFFQLKSQRNNYSSVYE 208

[Close]

BLAST of CmoCh06G006950 vs. ExPASy TrEMBL
Match: A0A6J1G512 (Vacuolar cation/proton exchanger OS=Cucurbita moschata OX=3662 GN=LOC111450980 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.8e-108
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA 60
           MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA
Sbjct: 22  MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA 81

Query: 61  TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA 120
           TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA
Sbjct: 82  TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA 141

Query: 121 FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS 180
           FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS
Sbjct: 142 FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS 201

Query: 181 SCIMLLAYAAYLFFQLKSQRNNYSSVYE 209
           SCIMLLAYAAYLFFQLKSQRNNYSSVYE
Sbjct: 202 SCIMLLAYAAYLFFQLKSQRNNYSSVYE 229

[Close]

BLAST of CmoCh06G006950 vs. ExPASy TrEMBL
Match: A0A0A0L257 (Vacuolar cation/proton exchanger OS=Cucumis sativus OX=3659 GN=Csa_3G045190 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.1e-96
Identity = 187/208 (89.90%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYA 60
           M +SFAYKS+KIVIF+NKLNFLM FGP+AILVD+L GHNSWVF LSLLGIIP AERLGYA
Sbjct: 1   MLDSFAYKSMKIVIFTNKLNFLMPFGPIAILVDELAGHNSWVFLLSLLGIIPLAERLGYA 60

Query: 61  TEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCA 120
           TEQLAFYTGPT GGLLNATFGNATELIISIFAL++QMIRVVQLSLLGSILSNMLLVLGCA
Sbjct: 61  TEQLAFYTGPTAGGLLNATFGNATELIISIFALRSQMIRVVQLSLLGSILSNMLLVLGCA 120

Query: 121 FFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFS 180
           FFCGG+VFNKKEQTFNKA A VNSGLLLMAVMGLLFP LL+YTHSEAHFGKSELALSRFS
Sbjct: 121 FFCGGIVFNKKEQTFNKATAVVNSGLLLMAVMGLLFPALLHYTHSEAHFGKSELALSRFS 180

Query: 181 SCIMLLAYAAYLFFQLKSQRNNYSSVYE 209
           SCIMLLAYAAYLFFQL SQ N YSSVYE
Sbjct: 181 SCIMLLAYAAYLFFQLMSQMNLYSSVYE 208

[Close]

BLAST of CmoCh06G006950 vs. ExPASy TrEMBL
Match: A0A6J1CQX0 (Vacuolar cation/proton exchanger OS=Momordica charantia OX=3673 GN=LOC111013344 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.0e-96
Identity = 187/204 (91.67%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 5   FAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQL 64
           FAYKSVKIVIFSNKLNFL+ FGPLAILVDKL+GHNSWVFFLSLLGIIP AERLGYATEQL
Sbjct: 23  FAYKSVKIVIFSNKLNFLLPFGPLAILVDKLSGHNSWVFFLSLLGIIPLAERLGYATEQL 82

Query: 65  AFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCG 124
           AFYTGPTVGGLLNATFGNATELIISIFALK+QMIRVVQLSLLGSILSNMLLVLGCAFFCG
Sbjct: 83  AFYTGPTVGGLLNATFGNATELIISIFALKSQMIRVVQLSLLGSILSNMLLVLGCAFFCG 142

Query: 125 GLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIM 184
           G+VF KKEQ+FNKA A VNSGLLLMAVMGLLFP LL+YTHSE HFG SELALSRFSSCIM
Sbjct: 143 GIVFCKKEQSFNKATAVVNSGLLLMAVMGLLFPALLHYTHSEVHFGTSELALSRFSSCIM 202

Query: 185 LLAYAAYLFFQLKSQRNNYSSVYE 209
           LLAYAAYLFFQLKSQ+N YSS+YE
Sbjct: 203 LLAYAAYLFFQLKSQKNLYSSIYE 226

[Close]

BLAST of CmoCh06G006950 vs. ExPASy TrEMBL
Match: A0A6J1CQB7 (Vacuolar cation/proton exchanger OS=Momordica charantia OX=3673 GN=LOC111013344 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.0e-96
Identity = 187/204 (91.67%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 5   FAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQL 64
           FAYKSVKIVIFSNKLNFL+ FGPLAILVDKL+GHNSWVFFLSLLGIIP AERLGYATEQL
Sbjct: 23  FAYKSVKIVIFSNKLNFLLPFGPLAILVDKLSGHNSWVFFLSLLGIIPLAERLGYATEQL 82

Query: 65  AFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCG 124
           AFYTGPTVGGLLNATFGNATELIISIFALK+QMIRVVQLSLLGSILSNMLLVLGCAFFCG
Sbjct: 83  AFYTGPTVGGLLNATFGNATELIISIFALKSQMIRVVQLSLLGSILSNMLLVLGCAFFCG 142

Query: 125 GLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIM 184
           G+VF KKEQ+FNKA A VNSGLLLMAVMGLLFP LL+YTHSE HFG SELALSRFSSCIM
Sbjct: 143 GIVFCKKEQSFNKATAVVNSGLLLMAVMGLLFPALLHYTHSEVHFGTSELALSRFSSCIM 202

Query: 185 LLAYAAYLFFQLKSQRNNYSSVYE 209
           LLAYAAYLFFQLKSQ+N YSS+YE
Sbjct: 203 LLAYAAYLFFQLKSQKNLYSSIYE 226

[Close]

BLAST of CmoCh06G006950 vs. TAIR 10
Match: AT3G13320.1 (cation exchanger 2 )

HSP 1 Score: 300.8 bits (769), Expect = 9.5e-82
Identity = 157/200 (78.50%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 9   SVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYT 68
           S+KIVIF NKLN L+ FGPLAILV  +     WVF L+L+GI P AERLGYATEQLA YT
Sbjct: 67  SIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYT 126

Query: 69  GPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVF 128
           GPTVGGLLNATFGN TELIISIFALKN MIRVVQL+LLGSILSNMLLVLGCAFFCGGLVF
Sbjct: 127 GPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVF 186

Query: 129 NKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAY 188
            +K+Q F+K  A VNSGLLLMAVMG+LFP +L+YTHSE H G SELALSRFSSCIML+AY
Sbjct: 187 YQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHYTHSEVHAGSSELALSRFSSCIMLIAY 246

Query: 189 AAYLFFQLKSQRNNYSSVYE 209
           AAYLFFQLKSQ N+YS + E
Sbjct: 247 AAYLFFQLKSQSNSYSPLDE 266

[Close]

BLAST of CmoCh06G006950 vs. TAIR 10
Match: AT1G55730.1 (cation exchanger 5 )

HSP 1 Score: 297.0 bits (759), Expect = 1.4e-80
Identity = 156/201 (77.61%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 8   KSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFY 67
           +S KIVI SNKLN L+ FGPLAIL+  LT +  W+F LSL+GI P AERLGYATEQLA Y
Sbjct: 66  QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query: 68  TGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLV 127
           TG TVGGLLNATFGN TELIISIFALK+ MIRVVQL+LLGSILSNMLLVLGCAFFCGGLV
Sbjct: 126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query: 128 FNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLA 187
           F++KEQ F+K  A VNSGLLLMAVMGLLFP +L+YTHSE H G SELALSRFSSCIML+A
Sbjct: 186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query: 188 YAAYLFFQLKSQRNNYSSVYE 209
           YAAYLFFQLKSQ ++Y+ + E
Sbjct: 246 YAAYLFFQLKSQPSSYTPLTE 266

[Close]

BLAST of CmoCh06G006950 vs. TAIR 10
Match: AT1G55730.2 (cation exchanger 5 )

HSP 1 Score: 297.0 bits (759), Expect = 1.4e-80
Identity = 156/201 (77.61%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 8   KSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFY 67
           +S KIVI SNKLN L+ FGPLAIL+  LT +  W+F LSL+GI P AERLGYATEQLA Y
Sbjct: 66  QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query: 68  TGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLV 127
           TG TVGGLLNATFGN TELIISIFALK+ MIRVVQL+LLGSILSNMLLVLGCAFFCGGLV
Sbjct: 126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query: 128 FNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLA 187
           F++KEQ F+K  A VNSGLLLMAVMGLLFP +L+YTHSE H G SELALSRFSSCIML+A
Sbjct: 186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query: 188 YAAYLFFQLKSQRNNYSSVYE 209
           YAAYLFFQLKSQ ++Y+ + E
Sbjct: 246 YAAYLFFQLKSQPSSYTPLTE 266

[Close]

BLAST of CmoCh06G006950 vs. TAIR 10
Match: AT1G55720.1 (cation exchanger 6 )

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-75
Identity = 149/197 (75.63%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 8   KSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFY 67
           +S KIVI SNKLN L+ FGPLAILV  LT +  W F LSL+GI P AERLGYATEQL+ Y
Sbjct: 77  QSFKIVILSNKLNLLLPFGPLAILVHYLTDNKGWFFLLSLVGITPLAERLGYATEQLSCY 136

Query: 68  TGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLV 127
           TG TVGGLLNATFGN  ELIISI ALKN MIRVVQL+LLGSILSN+LLVLGCAFFCGGLV
Sbjct: 137 TGATVGGLLNATFGNVIELIISIIALKNGMIRVVQLTLLGSILSNILLVLGCAFFCGGLV 196

Query: 128 FNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLA 187
           F  K+Q F+K  A V+SG+LLMAVMGLLFP  L+YTHSE H G SELALSRF SCIML+A
Sbjct: 197 FPGKDQVFDKRNAVVSSGMLLMAVMGLLFPTFLHYTHSEVHAGSSELALSRFISCIMLVA 256

Query: 188 YAAYLFFQLKSQRNNYS 205
           YAAYLFFQLKSQ + Y+
Sbjct: 257 YAAYLFFQLKSQPSFYT 273

[Close]

BLAST of CmoCh06G006950 vs. TAIR 10
Match: AT3G51860.1 (cation exchanger 3 )

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-43
Identity = 103/197 (52.28%), Postives = 128/197 (64.97%), Query Frame = 0


Query: 13  VIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYTGPTV 72
           VI   KL  L    PLAIL +        +F LSL+G+ P AER+ + TEQLAFYTGPTV
Sbjct: 69  VILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTV 128

Query: 73  GGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVFNKKE 132
           GGLLNAT GNATELII+I AL N  + VV+ SLLGSILSN+LLVLG + F GG+   ++E
Sbjct: 129 GGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRRE 188

Query: 133 QTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTH----SEAHFGKSELALSRFSSCIMLLAY 192
           Q F++  A VN  LLLM ++  L P+LL Y      S +   K  L LSR SS +ML+AY
Sbjct: 189 QRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMSLTLSRTSSIVMLIAY 248

Query: 193 AAYLFFQLKSQRNNYSS 206
            AYL FQL + R  + +
Sbjct: 249 IAYLIFQLWTHRQLFEA 265

The following BLAST results are available for this feature:

BLAST of CmoCh06G006950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39254	1.3e-80	78.50	Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=CAX2 PE=1 ...	[more]
Q8L783	1.9e-79	77.61	Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 ...	[more]
Q5KQN0	1.1e-74	70.59	Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9LFZ8	4.2e-74	75.63	Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q6K1C4	4.3e-71	68.16	Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]

BLAST of CmoCh06G006950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KUZ3	7.8e-108	100.00	Vacuolar cation/proton exchanger OS=Cucurbita maxima OX=3661 GN=LOC111498424 PE=...	[more]
A0A6J1G512	7.8e-108	100.00	Vacuolar cation/proton exchanger OS=Cucurbita moschata OX=3662 GN=LOC111450980 P...	[more]
A0A0A0L257	3.1e-96	89.90	Vacuolar cation/proton exchanger OS=Cucumis sativus OX=3659 GN=Csa_3G045190 PE=3...	[more]
A0A6J1CQX0	4.0e-96	91.67	Vacuolar cation/proton exchanger OS=Momordica charantia OX=3673 GN=LOC111013344 ...	[more]
A0A6J1CQB7	4.0e-96	91.67	Vacuolar cation/proton exchanger OS=Momordica charantia OX=3673 GN=LOC111013344 ...	[more]

BLAST of CmoCh06G006950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13320.1	9.5e-82	78.50	cation exchanger 2	[more]
AT1G55730.1	1.4e-80	77.61	cation exchanger 5	[more]
AT1G55730.2	1.4e-80	77.61	cation exchanger 5	[more]
AT1G55720.1	3.0e-75	75.63	cation exchanger 6	[more]
AT3G51860.1	1.8e-43	52.28	cation exchanger 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004837	Sodium/calcium exchanger membrane region	PFAM	PF01699	Na_Ca_ex	coord: 41..196 e-value: 4.4E-22 score: 78.6
IPR044880	NCX, central ion-binding domain superfamily	GENE3D	1.20.1420.30		coord: 70..223 e-value: 7.1E-16 score: 60.3
None	No IPR available	PANTHER	PTHR31503:SF48	VACUOLAR CATION/PROTON EXCHANGER 2	coord: 6..208
IPR004713	Calcium/proton exchanger	PANTHER	PTHR31503	VACUOLAR CALCIUM ION TRANSPORTER	coord: 6..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G006950.1	CmoCh06G006950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0006874	cellular calcium ion homeostasis
biological_process	GO:0006812	cation transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane
molecular_function	GO:0015369	calcium:proton antiporter activity
molecular_function	GO:0008324	cation transmembrane transporter activity