CmoCh06G006640 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGACAGGTGTGAAAAAAGGCTAAATAATCGCTATCCGTTCGTCAAAGAAGAACAGAGAGCTTCGAATTCTGCACTCGGAAGATTGAGATTGAAAAAGGTGTTTAGCAGAGCAGAGTGAGGAAGATAGTGAATCGCAGCCATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGTTCGAAACCAATCCTTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCTGGCGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTCTCTTTCTTTCTCTTTGTGTTAAGAATGTCTCCTTTGTTTTTCGTTTTACATGTTTGATTGCTGGTTTAGTTTTTGAAATTGGGATTAGCTATGAGAATAAACGAGTTAGTAACCATTGATAGCTAATGCGGTTTAGTATTCTGCTTTAACAGACTAATTATAGCAATAGATGGAGAATAAACGCCTAATTTGCTTAACATAGGAAGCCAAGCTGGAGCAGTAAGGGTTTAGTAATCATATTAGCAAGTTGAAACTGGCTCCAAACTGGATAGAGCTTAATAAAATCATTCAAAGTAAGAGCACTAAAACAGGACGAGATCAAGGTAAGTTAAGATCACCTAGTAGTATCAGTATGCGTACGATTGGACTTCCAAGAAACCATGGAATTCCAATCATTGGATTGCAAGACTAGAGCCAATCAACATCCACAAAAGCTTTTATGAACAACCATTAGATGAGTTGTGAGTGGACGAGCAGTAATACAATGAACAGGGGAAGATATATTTGGCACAAATGTGTGCATATGGTTGTTGATTAGAGAATAATGAATTGAAGAATCATCAACACTTAGGATCATCGTTGGGTACATCGAACTTCAAATTTTTATTACTAGGTATAAAAATTGGGTTAGATCTGCCGGACGAAGCATAACTCAATTGGTTAAGGCATATATTGTTTACTAATAAGTCATAGGTTTGAATCGTTGAGACACAAGGAAAAACAAAAGGGAAAAAAATTAACTTAAGTTGAAGAAGCCAATATTCTCCAATAGTTGCAAACAGTAGTTTCCTCAAAGAAAGGAAGATGCGACGAGTCTTAAACAACTCCGAGCTGAGAAAATAACCGAAAAAACCAATATCTTTAAGCTGAAACTAACTATGGAGCAAAAGTTTAACCATATAATAGTATCTTGACGAGGACCGCTTACGGTAATATCATCAGTGTACACCGACAATGCTACATAGGAGCAAACTGAACCATGAGTTAGCAAGGACTAATCGGCCGTGGACTAATAAAAAACAAGGGAAAGTAGTACATGAGAAAGAGGCGTATATACCTCCTCAAACATGACTAACTTCGAGTTGTCCAGGTTTCACTAACGAAATTGATTGGAAAACGTGTTCAGGAAGAGCAACAAGCATGTTTAGAATGGTTCTCTAAGATTGAAAAAGTGTTATAGAATACCTGATATGGCTATTTGCACAAGAATCAATTATCGATGTACTAATCGAGTCTCATTTAGAAACACAGTTAAAAATATGATCTGCTATATGAGATATAGAAGAACTAACCATATCTTCATTATTGAAGGAAGATAATGATAGATGAGTCTGAAACGGGTGAGTTCCAGTTTATCGAATAGGAAATATGAGTAAATCGGGGAAGATTTGCGAGCTTCCTTCTCTCCCGAGACTCACCCTAGTCCAATACTACCAAAAAAAATGTACTAATGGTGTTTCCTACTCCTAATATGTCAGCTGTCCAAATAACTCACATTCCATGGGACTCACACTACATTATGCATAATACTAGTCAGGAGGGCCACCCCTCACTTCATTACTGAAAAACATTTTCAGAATTGGGGTCTATCAGAAACATACTTATTAGCTGATGATCTTGAATAAGAGTAAGACAACAAAAAAACACAAGCTCTGGATTCTTTTCAGGAGCCATCCCGATCACATGATTAGTGTAAACCTTCTACGTATTTAGTAGATTAGGTGAATAAGAATTTTGTTTATGGTTATCACCTGATAGATAATGTGAATCTTGTTACAACGGTCTACTTGAAAACCTTTGATCCCATAATTTGTACAAATCAGTCTTCTTTCTTAGGTGGTTTATCAAAATTAGAAGGTTGCTGTTTCTTAATAATCTAAAAATTAAGAAAGCAAGGGGCTCTAAATTGATCGTTTAACGAACAACTTGTTGCTTCTCTCGTGTAACCAGCAAAAAAGCCTTATTTGTTGGCAGTCCGATTGTTAGCATAGGTATCATTGAATCATAAGAAAAATTATGATACCAATTTTTATTTTCAGTTTTTCTAGTTAGCCATGTACTAATAAAACTTAATGCATTCTGAGTATCCTTTAGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGGTGTGATTATTGAAAAAGAATACTGGAGTGTTTCACAATGAATAAATTTCATTACTGGTTACTGCTCTTTGAGGCTTTTTAAGGACTAATTTTGTTCGCTAATCTTTTGTTAATTGCAATTTATGAATCAGACATTTGCAGTTTTGTCTGGAGTACACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGGTGTGGTAACTTCACTTCGGAAATATTCGTATTTGGCTGTTTCGATCCCCTTTCTAATGATGTTAACTCATTTTTGTAGTTATTAATGCTGGGGTAGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGTAGTAACCTTTTCAACTGGCATCTCACTTCATTCTGTGATTACGTTTTTGGTGGCATCTGGCCTCTTTGTATGTTTTAATTCCATTCGAACACGTAAAGAAGTAGACAACACCTTATATGCCTCAGTTTCCACCATGGTAGCTCGTCGGCTCGAGCGACTCTTCAATTAATTTATTACGACTTGATTGATATTGCATTACTCCGAATTTTGATTTGGGTTAAAGAAGCTGAGTGTGAGTTCCCACATTGGTTGGAGAGAGGAACGAAGAATCCCTTATAAGAATGTGAAAACCTCTCCCTAGTGAGTGCGTTAAATCTTTAGGGGAAACCTGGAAGAGAAAGCCCAAAGAGAACAATATCTACTAACATTAGACTTGGGCGGTTACAAATGGTATCAAATCTAGACATCGAGCAGTGTGCCAACGAGGGCGCTGGTCCCCAAGGGGGTGAATTGTGAGTTCCCACATTGGTTGGAGAGGAGAACGAAGCATTCCTTATAAGGATGTGGAAACCTCTCCTAAGTGGACGCGTTTTAAAATCTAGAGGGGAAGCCCAGAAGGGACTAGTGGTGGGCTTGGACTTGGGCTGTTACATTGAGACGTACATCACTGCTACTTCGAATTCCTATATGTAAATGGAGGCTTTTGTTTCACAGGTGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCGTTTATACTCGAGGGCCTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGCTTTCTCGAGAAAGAGACGTAATATGGAGAGAAATCATCCTCCCTTAGTTTTGCCGCTTCAATTTGCGCTTCCAGCTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAAGACCTCATCCAGCTCTCTTTTAACATCTTTTGCACAAGACAGTCGTATTAATGCAAATTTGTAGCTAATGTTTAAAAGAGTTTGTTGCAATTTGAATGTAATTGTGCACTTTTGGATGGCTTATTTGAAGCAATGTTTTGCTATCTTCTTGTTCGTCAATGCGGTCTAGTTTCTGGCTAAGTTACAGATACTTGTTATGCGTTCGTACTTATATATATATATTTTGTGTGTATACACATATATGTTTGGATGTATGTTATGTTATGTATGATGTATAATATGTACATAGATGAATAGACATTTTGGCGACTTCGGTGCATATGTTACATACAAAGCTACTTCGAGT ACGACAGGTGTGAAAAAAGGCTAAATAATCGCTATCCGTTCGTCAAAGAAGAACAGAGAGCTTCGAATTCTGCACTCGGAAGATTGAGATTGAAAAAGGTGTTTAGCAGAGCAGAGTGAGGAAGATAGTGAATCGCAGCCATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGTTCGAAACCAATCCTTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCTGGCGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGACATTTGCAGTTTTGTCTGGAGTACACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGTTATTAATGCTGGGGTAGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGTGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCGTTTATACTCGAGGGCCTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGCTTTCTCGAGAAAGAGACGTAATATGGAGAGAAATCATCCTCCCTTAGTTTTGCCGCTTCAATTTGCGCTTCCAGCTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAAGACCTCATCCAGCTCTCTTTTAACATCTTTTGCACAAGACAGTCGTATTAATGCAAATTTGTAGCTAATGTTTAAAAGAGTTTGTTGCAATTTGAATGTAATTGTGCACTTTTGGATGGCTTATTTGAAGCAATGTTTTGCTATCTTCTTGTTCGTCAATGCGGTCTAGTTTCTGGCTAAGTTACAGATACTTGTTATGCGTTCGTACTTATATATATATATTTTGTGTGTATACACATATATGTTTGGATGTATGTTATGTTATGTATGATGTATAATATGTACATAGATGAATAGACATTTTGGCGACTTCGGTGCATATGTTACATACAAAGCTACTTCGAGT ATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGTTCGAAACCAATCCTTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCTGGCGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGACATTTGCAGTTTTGTCTGGAGTACACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGTTATTAATGCTGGGGTAGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGTGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCGTTTATACTCGAGGGCCTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGCTTTCTCGAGAAAGAGACGTAATATGGAGAGAAATCATCCTCCCTTAGTTTTGCCGCTTCAATTTGCGCTTCCAGCTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAA MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFALPAELKGAFSAFCKSLEKSRRSSW Homology
BLAST of CmoCh06G006640 vs. ExPASy Swiss-Prot
Match: Q94EH2 (Chloroplastic import inner membrane translocase subunit TIM22-2 OS=Arabidopsis thaliana OX=3702 GN=TIM22-2 PE=1 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 4.8e-63 Identity = 130/199 (65.33%), Postives = 154/199 (77.39%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy Swiss-Prot
Match: Q6NKU9 (Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis thaliana OX=3702 GN=TIM22-3 PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.2e-60 Identity = 127/199 (63.82%), Postives = 152/199 (76.38%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy Swiss-Prot
Match: A2RVP7 (Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis thaliana OX=3702 GN=TIM22-1 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy Swiss-Prot
Match: A1XJK0 (Mitochondrial import inner membrane translocase subunit TIM22-4 OS=Arabidopsis thaliana OX=3702 GN=TIM22-4 PE=2 SV=3) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy Swiss-Prot
Match: Q6CRJ6 (Mitochondrial import inner membrane translocase subunit TIM22 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TIM22 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07 Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy TrEMBL
Match: A0A6J1EZ67 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbita moschata OX=3662 GN=LOC111440058 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy TrEMBL
Match: A0A6J1L2H9 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111498505 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 5.5e-102 Identity = 196/203 (96.55%), Postives = 197/203 (97.04%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy TrEMBL
Match: A0A6J1DVI3 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Momordica charantia OX=3673 GN=LOC111024831 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96 Identity = 184/201 (91.54%), Postives = 192/201 (95.52%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy TrEMBL
Match: A0A5D3BBY2 (Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001810 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 8.5e-95 Identity = 187/205 (91.22%), Postives = 193/205 (94.15%), Query Frame = 0
BLAST of CmoCh06G006640 vs. ExPASy TrEMBL
Match: A0A6J1HL07 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465119 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 7.2e-94 Identity = 181/203 (89.16%), Postives = 190/203 (93.60%), Query Frame = 0
BLAST of CmoCh06G006640 vs. TAIR 10
Match: AT4G26670.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein ) HSP 1 Score: 242.3 bits (617), Expect = 3.4e-64 Identity = 130/199 (65.33%), Postives = 154/199 (77.39%), Query Frame = 0
BLAST of CmoCh06G006640 vs. TAIR 10
Match: AT5G55510.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein ) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-61 Identity = 127/199 (63.82%), Postives = 152/199 (76.38%), Query Frame = 0
BLAST of CmoCh06G006640 vs. TAIR 10
Match: AT3G10110.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of CmoCh06G006640 vs. TAIR 10
Match: AT1G18320.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein ) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of CmoCh06G006640 vs. TAIR 10
Match: AT5G24650.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein ) HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05 Identity = 38/131 (29.01%), Postives = 64/131 (48.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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