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CmoCh06G005440 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAGAAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGTATGTGCATCCGTGTTCCTCTGATTTCTGTTGTCCTGTGATAATTTATTTTAACCTAACTGTTATTGTCTTTCGAATTAAGATCTTAGTTTTCTACGGAAGTGTGAAGAAAAGAAAATTGGTTCGTTCTATTTGTTGTTGGCAAAGAGAAATTGTTAAACGTAGGTTTCGTTTCTTTATTTGGAATCAAATTGGTGTGATCCACATGGCTATTCCTAAGTTTGATTTCTTCTTTATTGTTTAGGGATATATCGTAGTTCTAAATTTTGAAGTATAATGTGCTAGGCTAAGGCTGATTCCTACGACTTGTTAAGTGAACATCTGTTTGATGCGTTGAAAATTCCGAGCCATTTGGGCGGTTTAATTTCTGATTTTGTTGCCGTGATTGGTTGTTTTAATGGAATCTTAGAGGGATGGACATTGAAATTGGAAGGTGCTAGGCTTACTGTTTGACATGTGAGTGATGATTTTTCTTGGGTTATTTGTATTGAAGGTTGAAGAATCATGACTTACCGGTTACCTCATAATTTTGTTCACTATGTTTTTTGGCCTAAATGACCAACATATAAGAATATTGATTTTTTCTTCTTGGTTATTTCACACACACTCACTTTCATTTCGGGTTCCTTCTGTCGAATTTTCTTCCAAATTTTGATAATTCATCACATAGAAAATGTAGATGCTTGCAAGGGACCGGAAAGAATCAAAATTTCCACACCCATTCAACATTTCATCCTAATAATTGTAAAAGCTTCTCTGGTGGTTTATATTCTTAAAGCACATCATATGAAAATTTTACAGTGTCCTCCCATGAAGGGACCTAGCAAATGAATAAATAATGTGTTTAACGTTCACTTTCTTAAAGTGTATGGGTTTCATAATTTGAGAATGTGTTTTGGAAGATGAGAATGAGAGTAGAAACTGAGAATGAGAGGAAGGAACAGATAAATGAAAGAAGAGACAAAAACTGAGTAGAAACTGAGAATGTGTTTTGGAAGATGAGAATGAGAGTGATGAAGGGGCATATGAAATAAGAGGGTTGAATGTGCTTTTTCTATCGTTCCTTAAGCGAAGTGCAACATCTCTAAACAATTAAAGTGAAAGAATGTAGCTGAGGTTATTTAATATATAAGAGCTCCTTCACTTTAAAATCTCTTCTGCGTTGTGATATAGAAAGGCAGGTTTAGGAAAAATATGTTTCTTGGATGGAAAATTATGAAGATGACCGAGGAATGCATTTCCTGGATTGCACTTGTGCTGGCTCGGTGTTTGATGGTTGAATGACTATGACATGATTGGAACTCATTGGTTAGTGCCTTGAGCCTCATGTAGTAGAATCCATGCATCATATATTGGAAAATATTGATTAGCCCTTAGATGAATGGTGATTAGGAACTTGAAGGGCAGTGTCTGGGAATATTTTTTCTGAGCCTGCCAGACGGAAGCTATTAGAACTCGTTAATGTTGTACATGGTCGGTTGCAAACTTGAAAATGATAAATTTTTTAACCTACATTGATGCTGCTTTAATTGCATGGAAGATCAAGTTGGAAAATATAGTAATCCCTTGCTTACATCGAATTCGAGCAGCCATCTACCGTGACAAAAACCGCCAGAAAGCCTTCCACTTGATATGTTGTAAGAGGATCACATGATATGATATTGGAGCTAGGAGTGAGGAAACTCTTTTCATTTATCGGATTGAACCAGGTGCTTTTGCTTCTTTAATGTGCTATGCTAAATTCTTAACACACGATGACTTCGGTTTTTGTGTTACCATGTTTTGATAGTATGAATGTATATCATTTGATAGATAGAACCCAAAGTGGAAAATTCATTTATAAAAGAACACATGTAAGGAATTTAAGAGCTCTTCCACCCCCCTCCAATCTATCAAAACCATCAGGAACTTGTGTCCTCTAGTTACTCATCTTCCCTTTTTTAAAATTACTTGCTTCTGGTTAGTTACTTTAGGCCTCTAGGTTGCTTCCCTGCTCCAACTGTTCTCCCCTTTTAGTTCAATTAAAGTGAGCTGAAGAGCTACCTATCAACTATACGAGTCATATGACTAAGTCATAGTTGCTTTGTTTCTTTACAGGCCGGTCGAAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAGAAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCGAAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAGAAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCGAAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV Homology
BLAST of CmoCh06G005440 vs. ExPASy Swiss-Prot
Match: W5X2N3 (Fra a 1-associated protein OS=Fragaria ananassa OX=3747 GN=AP PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 6.2e-46 Identity = 104/200 (52.00%), Postives = 134/200 (67.00%), Query Frame = 0
BLAST of CmoCh06G005440 vs. ExPASy TrEMBL
Match: A0A6J1FHK7 (uncharacterized protein LOC111445845 OS=Cucurbita moschata OX=3662 GN=LOC111445845 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CmoCh06G005440 vs. ExPASy TrEMBL
Match: A0A6J1KVN4 (uncharacterized protein LOC111498606 OS=Cucurbita maxima OX=3661 GN=LOC111498606 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95 Identity = 177/180 (98.33%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of CmoCh06G005440 vs. ExPASy TrEMBL
Match: A0A1S3B6X7 (uncharacterized protein LOC103486704 OS=Cucumis melo OX=3656 GN=LOC103486704 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 8.1e-65 Identity = 137/195 (70.26%), Postives = 155/195 (79.49%), Query Frame = 0
BLAST of CmoCh06G005440 vs. ExPASy TrEMBL
Match: A0A6J1DDK9 (uncharacterized protein LOC111019393 OS=Momordica charantia OX=3673 GN=LOC111019393 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63 Identity = 141/195 (72.31%), Postives = 152/195 (77.95%), Query Frame = 0
BLAST of CmoCh06G005440 vs. ExPASy TrEMBL
Match: A0A0A0LGU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782830 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 5.4e-61 Identity = 134/198 (67.68%), Postives = 153/198 (77.27%), Query Frame = 0
BLAST of CmoCh06G005440 vs. TAIR 10
Match: AT2G35900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 148.7 bits (374), Expect = 4.6e-36 Identity = 86/200 (43.00%), Postives = 114/200 (57.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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