CmoCh06G005270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G005270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dof zinc finger protein DOF3.5-like
Location	Cmo_Chr06: 2545948 .. 2546706 (-)
RNA-Seq Expression	CmoCh06G005270
Synteny	CmoCh06G005270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAGGTTGGAAGCCAATGGTGGAAATGTCACCAAATTGTCCTAGATGTGGCTCTTCTAATACTAAGTTTTGTTATTACAACAATTATAGCCTCACCCAACCTCGCTACTTCTGCAAGGGTTGTCGTCGGTACTGGACTAAAGGCGGTTCGCTTCGTAACATTCCTATTGGTGGTGGCTGTAGGAAGAATCGACGACCGGCTAAACCTTTAGCCCTAACCCCATCCTCCTCAACCTCTAAATTTCACAATGATAGAAGCTGCCTCGGTCACCACCACCGTCTCCCGGACCCCAATGGGTCGCCAACTATCGACTTGGCGGTCGTCTACGCCAATTTTGTGAACCAGAAGCCACACATGCCGGGGAGTTTTCCGATGACCGATACTACTGCATCGAACGGAGCCAGGAACTTCTTGGGTTCGGGTGAGAGTGGTGGAAATTTTTGTGAGTTTTCCACGCAGGAATGTGGGTTAGGGGCCAGTGATTATCAAGTGGCGGATTGCTTTGGGTTAGAGGAGAAGAATGATGATCAAGTGGCGGCGGCGGCGGCTCGTGAGCTTCAATTGCCGCCGTTGCCGGGGGAGGACATGGTCGTTGGCGGTTGGTCAAGCTCTATGATCATGGTGAATCATCTTTGTTTCCAACCAACAAGAGTGGAAATGTTTGGAATGGAAGCTCAAGATCCAAATTTGGTTGGTAGCAATTGGAGCCCTATTGATTTGCCAAGTATTTATGATACATTTTCAAGGGCTTAA

mRNA sequence

ATGGAGAGAGGTTGGAAGCCAATGGTGGAAATGTCACCAAATTGTCCTAGATGTGGCTCTTCTAATACTAAGTTTTGTTATTACAACAATTATAGCCTCACCCAACCTCGCTACTTCTGCAAGGGTTGTCGTCGGTACTGGACTAAAGGCGGTTCGCTTCGTAACATTCCTATTGGTGGTGGCTGTAGGAAGAATCGACGACCGGCTAAACCTTTAGCCCTAACCCCATCCTCCTCAACCTCTAAATTTCACAATGATAGAAGCTGCCTCGGTCACCACCACCGTCTCCCGGACCCCAATGGGTCGCCAACTATCGACTTGGCGGTCGTCTACGCCAATTTTGTGAACCAGAAGCCACACATGCCGGGGAGTTTTCCGATGACCGATACTACTGCATCGAACGGAGCCAGGAACTTCTTGGGTTCGGGTGAGAGTGGTGGAAATTTTTGTGAGTTTTCCACGCAGGAATGTGGGTTAGGGGCCAGTGATTATCAAGTGGCGGATTGCTTTGGGTTAGAGGAGAAGAATGATGATCAAGTGGCGGCGGCGGCGGCTCGTGAGCTTCAATTGCCGCCGTTGCCGGGGGAGGACATGGTCGTTGGCGGTTGGTCAAGCTCTATGATCATGGTGAATCATCTTTGTTTCCAACCAACAAGAGTGGAAATGTTTGGAATGGAAGCTCAAGATCCAAATTTGGTTGGTAGCAATTGGAGCCCTATTGATTTGCCAAGTATTTATGATACATTTTCAAGGGCTTAA

Coding sequence (CDS)

ATGGAGAGAGGTTGGAAGCCAATGGTGGAAATGTCACCAAATTGTCCTAGATGTGGCTCTTCTAATACTAAGTTTTGTTATTACAACAATTATAGCCTCACCCAACCTCGCTACTTCTGCAAGGGTTGTCGTCGGTACTGGACTAAAGGCGGTTCGCTTCGTAACATTCCTATTGGTGGTGGCTGTAGGAAGAATCGACGACCGGCTAAACCTTTAGCCCTAACCCCATCCTCCTCAACCTCTAAATTTCACAATGATAGAAGCTGCCTCGGTCACCACCACCGTCTCCCGGACCCCAATGGGTCGCCAACTATCGACTTGGCGGTCGTCTACGCCAATTTTGTGAACCAGAAGCCACACATGCCGGGGAGTTTTCCGATGACCGATACTACTGCATCGAACGGAGCCAGGAACTTCTTGGGTTCGGGTGAGAGTGGTGGAAATTTTTGTGAGTTTTCCACGCAGGAATGTGGGTTAGGGGCCAGTGATTATCAAGTGGCGGATTGCTTTGGGTTAGAGGAGAAGAATGATGATCAAGTGGCGGCGGCGGCGGCTCGTGAGCTTCAATTGCCGCCGTTGCCGGGGGAGGACATGGTCGTTGGCGGTTGGTCAAGCTCTATGATCATGGTGAATCATCTTTGTTTCCAACCAACAAGAGTGGAAATGTTTGGAATGGAAGCTCAAGATCCAAATTTGGTTGGTAGCAATTGGAGCCCTATTGATTTGCCAAGTATTTATGATACATTTTCAAGGGCTTAA

Protein sequence

MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPHMPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQVAAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCFQPTRVEMFGMEAQDPNLVGSNWSPIDLPSIYDTFSRA

Homology

[Close]

BLAST of CmoCh06G005270 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-40
Identity = 102/254 (40.16%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 5   WKP----MVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 64
           W+P      E++P+CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRN+P+GG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 65  GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPH 124
           GCRK+RRP           +S  +N ++ L  +   P   GSP+IDLA+VYANF+N KP 
Sbjct: 73  GCRKSRRP----------KSSSGNNTKTSLTANSGNPG-GGSPSIDLALVYANFLNPKP- 132

Query: 125 MPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQV 184
                 +          +FL    +G +     + +   G  D+ +         N  + 
Sbjct: 133 ---DESILQENCDLATTDFLVDNPTGTSMDPSWSMDINDGHHDHYI---------NPVEH 192

Query: 185 AAAAARELQLPPLPGEDMVV----GGWSSSMIM-VNHLCFQPTRVEM-------FGMEAQ 242
                    LPP PGE+++     G WS ++++  NH+    T V+        F  E+ 
Sbjct: 193 IVEECGYNGLPPFPGEELLSLDTNGVWSDALLIGHNHVDVGVTPVQAVHEPVVHFADESN 242

[Close]

BLAST of CmoCh06G005270 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-28
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 2   ERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGG 61
           ER  +P  + + NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNIP+GGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 62  CRKNRRPAKPLALTPSSSTSKFHND-------RSCLGHHHRL 97
            RKN+R     + + SS  S  H+D       +    HHH L
Sbjct: 102 SRKNKR-----SHSSSSDISNNHSDSTQPATKKHLSDHHHHL 138

[Close]

BLAST of CmoCh06G005270 vs. ExPASy Swiss-Prot
Match: P68349 (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 66/130 (50.77%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 5   WKPMVEM----SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 64
           WK   E     +P CPRC SSNTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRNIP+GG
Sbjct: 26  WKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGG 85

Query: 65  GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPD------------PNGSPTIDLA 119
           GCRK  R  +              N     G +   PD            P GS  IDLA
Sbjct: 86  GCRKRSRSRQ--------------NSHKRFGRNENRPDGLINQDDGFQSSPPGS-DIDLA 140

[Close]

BLAST of CmoCh06G005270 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.1e-27
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 10  EMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRR-- 69
           E++  CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTKGG+LRNIP+GGGCRKN+R  
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 70  --PAKPLALT--PSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKP 120
              A+ L  T  P+S   K  +     G+       + +  IDL++ +A    Q P
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGY-------SNNEHIDLSLAFALLNKQHP 160

[Close]

BLAST of CmoCh06G005270 vs. ExPASy Swiss-Prot
Match: Q8LE43 (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 78/176 (44.32%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRRPAKPLA 73
           NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWTKGG+LRN+P+GGGCR+N+R      
Sbjct: 49  NCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKR------ 108

Query: 74  LTPSSSTSKFHNDRSCLGHHHRLPDP--NGSP--------TIDLAVVYANFVNQKPHMPG 133
            + SS+ SK +N++S   H   L +P   G P        +IDL + +A    QK H+  
Sbjct: 109 -SSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATL--QKHHLSS 168

Query: 134 SFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASD---YQVADCFGLEEKN 177
                 TT S G   F G     GN    ST + G+       Y  + C+G    N
Sbjct: 169 Q----ATTPSFG---FGGDLSIYGN----STNDVGIFGGQNGTYNNSLCYGFMSGN 204

[Close]

BLAST of CmoCh06G005270 vs. ExPASy TrEMBL
Match: A0A6J1GVM5 (dof zinc finger protein DOF3.5-like OS=Cucurbita moschata OX=3662 GN=LOC111457928 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.1e-151
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 60
           MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG
Sbjct: 1   MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 60

Query: 61  GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPH 120
           GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPH
Sbjct: 61  GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPH 120

Query: 121 MPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQV 180
           MPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQV
Sbjct: 121 MPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQV 180

Query: 181 AAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCFQPTRVEMFGMEAQDPNLVGSNWSPI 240
           AAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCFQPTRVEMFGMEAQDPNLVGSNWSPI
Sbjct: 181 AAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCFQPTRVEMFGMEAQDPNLVGSNWSPI 240

Query: 241 DLPSIYDTFSRA 253
           DLPSIYDTFSRA
Sbjct: 241 DLPSIYDTFSRA 252

[Close]

BLAST of CmoCh06G005270 vs. ExPASy TrEMBL
Match: A0A6J1L3M3 (dof zinc finger protein DOF3.5-like OS=Cucurbita maxima OX=3661 GN=LOC111498828 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.9e-136
Identity = 236/259 (91.12%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 1   MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 60
           MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG
Sbjct: 1   MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 60

Query: 61  GCRKNRRPAKPLALTPSSSTSKFH--NDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQK 120
           GCRKNRRPAKPLALTPSSSTSKFH  NDRSCL H HRLPDPNGS TIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRPAKPLALTPSSSTSKFHHSNDRSCLSHLHRLPDPNGSLTIDLAVVYANFVNQK 120

Query: 121 PHMPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDD 180
           P MPG+FPMTDT+ASNGA NFLGSGE+GGNFCEFS+QECGLGASDYQVADCFGLEEKNDD
Sbjct: 121 PDMPGTFPMTDTSASNGAGNFLGSGENGGNFCEFSSQECGLGASDYQVADCFGLEEKNDD 180

Query: 181 Q-----VAAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCFQPTRVEMFGMEAQDPNLV 240
           Q     VAAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLC QPTRVEMF ME QDPNLV
Sbjct: 181 QVNNIEVAAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCLQPTRVEMFAMETQDPNLV 240

Query: 241 GSNWSPIDLPSIYDTFSRA 253
             NWSPIDLPS YDTFS A
Sbjct: 241 SGNWSPIDLPSNYDTFSMA 259

[Close]

BLAST of CmoCh06G005270 vs. ExPASy TrEMBL
Match: A0A6J1F338 (dof zinc finger protein DOF3.5 OS=Cucurbita moschata OX=3662 GN=LOC111441744 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.6e-98
Identity = 185/256 (72.27%), Postives = 206/256 (80.47%), Query Frame = 0


Query: 1   MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 60
           M+RGWKPMVE+SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRN+PIGG
Sbjct: 1   MDRGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGG 60

Query: 61  GCRKNRRPAKPLALTPSSSTSKFH--NDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQK 120
           GCR++RRPAKPL L+PS S  KFH  N  S L H+HRLPDP+ SP IDLAVVYANFVNQK
Sbjct: 61  GCRRHRRPAKPLTLSPSPSNPKFHHTNGTSSLHHNHRLPDPDVSPVIDLAVVYANFVNQK 120

Query: 121 PHMPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDD 180
              PG+ P  D+T SN A      GES GN CEFS QECGLG ++YQV  CFGLEE +++
Sbjct: 121 LTTPGTIP-ADSTTSNAA------GES-GNLCEFSMQECGLGGNEYQVPGCFGLEENSEN 180

Query: 181 QV--AAAAARELQLPPLPGEDMVVGGWSSSMIMVNHLCFQPTRVEMFGMEAQDPNLVGSN 240
           QV     AARELQLPPLPGE+M VG W++ MIM NH   QPTRVE+FGME QDP L+G N
Sbjct: 181 QVDNIELAARELQLPPLPGEEM-VGSWANPMIM-NHHHLQPTRVEVFGMETQDPTLLGGN 240

Query: 241 WSPIDLPSIYDTFSRA 253
           WSPIDL S Y+TFSRA
Sbjct: 241 WSPIDL-SNYETFSRA 245

[Close]

BLAST of CmoCh06G005270 vs. ExPASy TrEMBL
Match: A0A6J1IYA6 (dof zinc finger protein DOF3.5-like OS=Cucurbita maxima OX=3661 GN=LOC111481739 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92
Identity = 179/251 (71.31%), Postives = 199/251 (79.28%), Query Frame = 0


Query: 8   MVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRR 67
           MVE+SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRN+PIGGGCR++RR
Sbjct: 1   MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRRHRR 60

Query: 68  PAKPLALTPSSSTSKFH--NDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPHMPGSF 127
           PAKPL L+PS S  KFH  N  S L H+HRL D + SP IDLAVVYANFVNQK   PG+ 
Sbjct: 61  PAKPLTLSPSPSNPKFHHSNGTSSLHHNHRLHDSDVSPVIDLAVVYANFVNQKLTTPGTI 120

Query: 128 PMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQV--AAA 187
           P  D+T SN A      GES GN C FS QECGLG ++YQVA CFGLEE +D+QV     
Sbjct: 121 P-ADSTTSNAA------GES-GNLCAFSMQECGLGGNEYQVAGCFGLEENSDNQVDNIEV 180

Query: 188 AARELQLPPLPGEDMVVGGWSSSMIMVN--HLCFQPTRVEMFGMEAQDPNLVGSNWSPID 247
           AARELQLPPLPGE+M VGGW++ MIMVN  H   QPTRVE+FGME +DP L+G NWSPID
Sbjct: 181 AARELQLPPLPGEEM-VGGWANPMIMVNRRHHHLQPTRVEVFGMETEDPTLLGGNWSPID 240

Query: 248 LPSIYDTFSRA 253
           L S Y+TFSRA
Sbjct: 241 L-SNYETFSRA 241

[Close]

BLAST of CmoCh06G005270 vs. ExPASy TrEMBL
Match: A0A5D3DP00 (Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004620 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.9e-92
Identity = 187/264 (70.83%), Postives = 200/264 (75.76%), Query Frame = 0


Query: 1   MERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 60
           MERGWKPMVE+SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRN+P+GG
Sbjct: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRRPAKPLALTPSSSTSKFH--NDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQK 120
           GCRKNRR  KPL LTPS S  K H  ND     HH  L   + SPTIDLAVVYANFVNQK
Sbjct: 61  GCRKNRRSPKPLTLTPSPSNPKLHHTNDSDYQRHHCDLSGSDVSPTIDLAVVYANFVNQK 120

Query: 121 PHMPGSFPMTDTTASNGARNFLGSGESG----GNFCEFSTQECGLGASDYQV-ADCFGLE 180
           P    + P T+TT SN A +F  SGESG    GNFCEFS QECGLGASDYQV   CFGLE
Sbjct: 121 PDTRETIPTTNTT-SNAAGHFPVSGESGVVGCGNFCEFSMQECGLGASDYQVGGGCFGLE 180

Query: 181 E---KNDDQV--AAAAARELQLPPLPGEDMVVGGWSSSMIMV-NHLCFQPTRVEMFGMEA 240
           E    N++QV     AARELQLPPLPGED VV  W +SMIMV NH   QPTRVEMF    
Sbjct: 181 ESNNNNENQVDNIEVAARELQLPPLPGED-VVEAWGNSMIMVNNHHRLQPTRVEMF---- 240

Query: 241 QDPNLVGSNWSPIDLPSIYDTFSR 252
           +DPNL+  NWSPIDL S YDTFS+
Sbjct: 241 EDPNLLSGNWSPIDL-SNYDTFSK 257

[Close]

BLAST of CmoCh06G005270 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 102/254 (40.16%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 5   WKP----MVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 64
           W+P      E++P+CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRN+P+GG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 65  GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKPH 124
           GCRK+RRP           +S  +N ++ L  +   P   GSP+IDLA+VYANF+N KP 
Sbjct: 73  GCRKSRRP----------KSSSGNNTKTSLTANSGNPG-GGSPSIDLALVYANFLNPKP- 132

Query: 125 MPGSFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASDYQVADCFGLEEKNDDQV 184
                 +          +FL    +G +     + +   G  D+ +         N  + 
Sbjct: 133 ---DESILQENCDLATTDFLVDNPTGTSMDPSWSMDINDGHHDHYI---------NPVEH 192

Query: 185 AAAAARELQLPPLPGEDMVV----GGWSSSMIM-VNHLCFQPTRVEM-------FGMEAQ 242
                    LPP PGE+++     G WS ++++  NH+    T V+        F  E+ 
Sbjct: 193 IVEECGYNGLPPFPGEELLSLDTNGVWSDALLIGHNHVDVGVTPVQAVHEPVVHFADESN 242

[Close]

BLAST of CmoCh06G005270 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-29
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 2   ERGWKPMVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGG 61
           ER  +P  + + NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRNIP+GGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 62  CRKNRRPAKPLALTPSSSTSKFHND-------RSCLGHHHRL 97
            RKN+R     + + SS  S  H+D       +    HHH L
Sbjct: 102 SRKNKR-----SHSSSSDISNNHSDSTQPATKKHLSDHHHHL 138

[Close]

BLAST of CmoCh06G005270 vs. TAIR 10
Match: AT1G21340.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.2 bits (313), Expect = 7.6e-29
Identity = 66/130 (50.77%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 5   WKPMVEM----SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGG 64
           WK   E     +P CPRC SSNTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRNIP+GG
Sbjct: 26  WKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGG 85

Query: 65  GCRKNRRPAKPLALTPSSSTSKFHNDRSCLGHHHRLPD------------PNGSPTIDLA 119
           GCRK  R  +              N     G +   PD            P GS  IDLA
Sbjct: 86  GCRKRSRSRQ--------------NSHKRFGRNENRPDGLINQDDGFQSSPPGS-DIDLA 140

[Close]

BLAST of CmoCh06G005270 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-28
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 10  EMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRR-- 69
           E++  CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTKGG+LRNIP+GGGCRKN+R  
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 70  --PAKPLALT--PSSSTSKFHNDRSCLGHHHRLPDPNGSPTIDLAVVYANFVNQKP 120
              A+ L  T  P+S   K  +     G+       + +  IDL++ +A    Q P
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGY-------SNNEHIDLSLAFALLNKQHP 160

[Close]

BLAST of CmoCh06G005270 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 121.7 bits (304), Expect = 8.4e-28
Identity = 78/176 (44.32%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 14  NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRRPAKPLA 73
           NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWTKGG+LRN+P+GGGCR+N+R      
Sbjct: 49  NCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKR------ 108

Query: 74  LTPSSSTSKFHNDRSCLGHHHRLPDP--NGSP--------TIDLAVVYANFVNQKPHMPG 133
            + SS+ SK +N++S   H   L +P   G P        +IDL + +A    QK H+  
Sbjct: 109 -SSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATL--QKHHLSS 168

Query: 134 SFPMTDTTASNGARNFLGSGESGGNFCEFSTQECGLGASD---YQVADCFGLEEKN 177
                 TT S G   F G     GN    ST + G+       Y  + C+G    N
Sbjct: 169 Q----ATTPSFG---FGGDLSIYGN----STNDVGIFGGQNGTYNNSLCYGFMSGN 204

The following BLAST results are available for this feature:

BLAST of CmoCh06G005270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVC5	1.9e-40	40.16	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
Q8LAP8	3.7e-28	58.82	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
P68349	1.1e-27	50.77	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV...	[more]
Q84TE9	9.1e-27	52.59	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
Q8LE43	1.2e-26	44.32	Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV...	[more]

BLAST of CmoCh06G005270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVM5	6.1e-151	100.00	dof zinc finger protein DOF3.5-like OS=Cucurbita moschata OX=3662 GN=LOC11145792...	[more]
A0A6J1L3M3	1.9e-136	91.12	dof zinc finger protein DOF3.5-like OS=Cucurbita maxima OX=3661 GN=LOC111498828 ...	[more]
A0A6J1F338	4.6e-98	72.27	dof zinc finger protein DOF3.5 OS=Cucurbita moschata OX=3662 GN=LOC111441744 PE=...	[more]
A0A6J1IYA6	1.7e-92	71.31	dof zinc finger protein DOF3.5-like OS=Cucurbita maxima OX=3661 GN=LOC111481739 ...	[more]
A0A5D3DP00	4.9e-92	70.83	Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CmoCh06G005270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52440.1	1.3e-41	40.16	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	2.6e-29	58.82	Dof-type zinc finger DNA-binding family protein	[more]
AT1G21340.1	7.6e-29	50.77	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	6.4e-28	52.59	TARGET OF MONOPTEROS 6	[more]
AT2G28510.1	8.4e-28	44.32	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 13..67 e-value: 4.1E-31 score: 106.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 15..51
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 13..67 score: 28.509169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..97
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..171
None	No IPR available	PANTHER	PTHR31992:SF131	DOF DOMAIN ZINC FINGER PROTEIN	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G005270.1	CmoCh06G005270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding