CmoCh06G005100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G005100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Thioredoxin-dependent peroxiredoxin
Location	Cmo_Chr06: 2451344 .. 2454467 (+)
RNA-Seq Expression	CmoCh06G005100
Synteny	CmoCh06G005100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGGTGAACCAGGGAGCTATCCAACGCTTCCCTTTACTTATCCTCTCGTCTCCATTTTTGCGCCTTAGACTGACTTTCTGCTGCAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCTACCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGCCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGTAAGTCCTTCCAGCCTTCCGCCCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGTGCTTCTGTAAGTGTTGCATCTCTCACTATGCCCTTGTTTTGCGGCGTTTCACTCTTTTGGTGAAGTTTGAAATTGTAATTTTCGTTTTGTTTTCCTTGTGATTCTTGTTTGGTTTTTCTTTCTGAAGTCCGAATGCATTTACTAGGATGTTTTGTTTCCCCTAATTTTGGTTAATTATGTAATGATCAATGGGGCATTTTATTCGTATATATTTGGATATTGGCGGCAACAATGAGCCATTTCTTTTGTACTCCGACTGCATTATGCCAAAATTTTGGAAATCCAACTTATTATTCCCTAAATGTCGCCTTTTCAAATACCCTTTTCTGAAAACTTCTCCTGTCTTCGTTATGTTCTTTGAATTTTTCTTCACGTAGTCAGATTATTGATTCAGTCATGCAGGGTGAGTTTAAACAGTTTGTATCTATTAGAATTTTCATGTATATTGTATATGTAACTTATGATATTTGTTCGTGCAAGGCAGAAATCAGCGTCTTGCAACTCAAAATATGAACATGCGAGTTATTTCTTTTGAGGGTTCCACTTCTGACGTTGTGTTCCATTATTTGTTTTTACAGAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGACCAGGAATTTATCAAGGTAATTCTCCATGGCTTAGGTTTTGGATACTGTTTATTCCTCTTTGTTGTCATCAGACTGTATTAGTGCAATGATTTTTGGAGTAGAATTACAGTAAGCTTATAAAAGGTTTGGTTAAAGATTATGTGCAAGTTTCAAAGGTTTACCGTTCGGATTGCATCGTCTTCACATTTGATCTAAAGTGTTATGATTTCAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGGTTTGTTGCACTAAACTATACCAAATTGAAGCTCAGCAAATATTGTTTTGAGCTGCTTTGAACTTGTGTTTATTTTACCTCCTATTTTGTAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCGGTTGACAGTGTTGTAAGTAGATACTTGCTTCTCTTGTTCAACAAAGTTATACTTTTGCAAAAAAGTTTTGTGTTGATGAAATTCTGCTTCTATTCCTCAAAATGTGGTAGCTTGTTCTTTGAGATTCCACATCGATTGGAGAGAGGAACGAGTGCCGGCGAAGACGCTTGGCCTCGAAAGGGAGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAACGAAACATTCTTTATAAAGGTGTGGAAACCTCGCCCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCTCAAAGAGAACAATATCTGCTAGCAGTGGGCTTGAGCTGTTACAATTTTGGTTGTGATTGTGATGATACTAAATAGAACCTTTTTGCAGTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAGTATCCTTTGGTTTCTGATGTCACTAAATCAATTTCAAAATCTTATGGTGTGCTGATCCCAGATCAGGTATGTCAATATCATCCCTTACTGTATTACAAAGTTTGTTCCAAATTAGACCACTACCATAAAACCATTGTTCTAAGAAACCAAGCAGCTGATGAGCTGTTGTGAATGAAAACTGGAATTCGGTTTTTGCTGATATTGTAATAAGAAAAAACATGACATCCCACGTCGGTTGGAGAGTTGAACGAAACATTCCTTGTAAGGATGTGGAAACCTCTCTCTAGCAGACACGTTTTAAAACCATGAAGCTGACGGCAATACGTAACGAACCAAAGTAGACAATAATGCCCGCGGTGGAACTTTAGTCATTAGAATAAGCAATTTTAATTTTGTAGGCATTGTTTGAGTATACGTCTACAATAGGCGTAGAAGTCACATGGTTGTAATTGCTTACCTAACCTTTATCCACAACAATTTAATGAACAGGGAATTGCACTAAGGGGTCTGTTCATAATTGACAAGGAAGGAGTTATCCAACACTCAACAATAAACAATCTTGGTATCGGTCGGAGCGTAGACGAGACGAAGAGAACTCTCCAAGTAATTTCAATCATTCATCTAACAAGAAGAAGATTGTTTATCAAGAGTTGTTGTTCATAATTTCCTTGTCTTTGATGTTGCAGGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAATTGTGTGTAAGAAGTTTGAATCTGGTGCAATGTCATTGCCAGTTTAGTTACTCCGCTTGTCGAACAAATTGGTTAACGAGGCTCGAGTCATCTCATCATCTCATCATCTCGTCATCTCGTCATCAGATATATAGAGTGTTGAATTTTATCTTCTTTAGATGAATTAAGCAGACAGGCTCTATGGTTTGTTTTGTAGAATTATTATCCTTAATTTGCAATGGCATCAATGGTTTCACGCCCTCTGCTGCTCGTGTCTTGTCAATGAACTCTAAATTTCACGATCGATCGAAAATGAATCGAACTTCGAGTTTCAATGGTTCTCGGATTAAATCTGCTAGAATTTGTATCCTGATGAACCGAACTTAAACTTTAATATTTAATTTGAT

mRNA sequence

ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCTACCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGCCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGTAAGTCCTTCCAGCCTTCCGCCCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGTGCTTCTAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGACCAGGAATTTATCAAGGTAATTCTCCATGGCTTAGGTTTTGGATACTGTTTATTCCTCTTTGTTGTCATCAGACTAAAGTCTGGTGGGCTTGGTGATCTTCAGTATCCTTTGGTTTCTGATGTCACTAAATCAATTTCAAAATCTTATGGTGTGCTGATCCCAGATCAGGGAATTGCACTAAGGGGTCTGTTCATAATTGACAAGGAAGGAGTTATCCAACACTCAACAATAAACAATCTTGGTATCGGTCGGAGCGTAGACGAGACGAAGAGAACTCTCCAAGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAATTGTGTGTAAGAAGTTTGAATCTGGTGCAATGTCATTGCCAGTTTAGTTACTCCGCTTGTCGAACAAATTGGTTAACGAGGCTCGAGTCATCTCATCATCTCATCATCTCGTCATCTCGTCATCAGATATATAGAGTGTTGAATTTTATCTTCTTTAGATGAATTAAGCAGACAGGCTCTATGGTTTGTTTTGTAGAATTATTATCCTTAATTTGCAATGGCATCAATGGTTTCACGCCCTCTGCTGCTCGTGTCTTGTCAATGAACTCTAAATTTCACGATCGATCGAAAATGAATCGAACTTCGAGTTTCAATGGTTCTCGGATTAAATCTGCTAGAATTTGTATCCTGATGAACCGAACTTAAACTTTAATATTTAATTTGAT

Coding sequence (CDS)

ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCTACCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGCCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGTAAGTCCTTCCAGCCTTCCGCCCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGTGCTTCTAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGACCAGGAATTTATCAAGGTAATTCTCCATGGCTTAGGTTTTGGATACTGTTTATTCCTCTTTGTTGTCATCAGACTAAAGTCTGGTGGGCTTGGTGATCTTCAGTATCCTTTGGTTTCTGATGTCACTAAATCAATTTCAAAATCTTATGGTGTGCTGATCCCAGATCAGGGAATTGCACTAAGGGGTCTGTTCATAATTGACAAGGAAGGAGTTATCCAACACTCAACAATAAACAATCTTGGTATCGGTCGGAGCGTAGACGAGACGAAGAGAACTCTCCAAGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA

Protein sequence

MDISRIAPKCVELPASSSAMACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVILHGLGFGYCLFLFVVIRLKSGGLGDLQYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKGSKEYFSAIA

Homology

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BLAST of CmoCh06G005100 vs. ExPASy Swiss-Prot
Match: Q96291 (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAS1 PE=1 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 4.8e-65
Identity = 157/271 (57.93%), Postives = 174/271 (64.21%), Query Frame = 0


Query: 24  AATATATALFSSNPS-AFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSR 83
           A+ A++T L SS  S  FPAKS+  + S    R L+ P +   LR  F      +  SS 
Sbjct: 2   ASVASSTTLISSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGF------ARRSSL 61

Query: 84  GARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVILHG-LGFGYCLFLF----- 143
            + SRRSFAV+A + +LPLVGN APDFEAEAVFDQEFIKV L   +G  Y +  F     
Sbjct: 62  SSTSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDF 121

Query: 144 ---------------------------------------VVIRLKSGGLGDLQYPLVSDV 203
                                                  V    KSGGLGDL YPL+SDV
Sbjct: 122 TFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDV 181

Query: 204 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQE 248
           TKSISKS+GVLI DQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQY+QE
Sbjct: 182 TKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQE 241

[Close]

BLAST of CmoCh06G005100 vs. ExPASy Swiss-Prot
Match: Q9C5R8 (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g06290 PE=2 SV=3)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-62
Identity = 158/276 (57.25%), Postives = 180/276 (65.22%), Query Frame = 0


Query: 23  SAATATATALFSSNPSAFPAKSN--APTASAPSSRNLALPKSFV---GLRKSFQPSAPRS 82
           S A++++T L SS+    P+KS+  +PT S P      +P S      L   F  S+  S
Sbjct: 5   SIASSSSTTLLSSSRVLLPSKSSLLSPTVSFPR----IIPSSSASSSSLCSGF--SSLGS 64

Query: 83  ISSSRGARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF 142
           ++++R A SRR+FAV+A + +LPLVGN APDFEAEAVFDQEFIKV L   +G  Y +  F
Sbjct: 65  LTTNRSA-SRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFF 124

Query: 143 --------------------------------------------VVIRLKSGGLGDLQYP 202
                                                       V    KSGGLGDL YP
Sbjct: 125 YPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYP 184

Query: 203 LVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQAL 248
           LVSD+TKSISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQAL
Sbjct: 185 LVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQAL 244

[Close]

BLAST of CmoCh06G005100 vs. ExPASy Swiss-Prot
Match: O24364 (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea OX=3562 GN=BAS1 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.5e-62
Identity = 155/271 (57.20%), Postives = 170/271 (62.73%), Query Frame = 0


Query: 24  AATATATALFSSNPS-AFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSR 83
           A  A++T L SS  S  FPAKS+  + S    R L+ P +   LR  F      +  SS 
Sbjct: 2   ACVASSTTLISSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGF------ARRSSL 61

Query: 84  GARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVILHG-LGFGYCLFLF----- 143
            + SRRSFAV+A + +LPLVGN APDFEAEAVFDQEFIKV L   +G  Y +  F     
Sbjct: 62  SSTSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDF 121

Query: 144 ---------------------------------------VVIRLKSGGLGDLQYPLVSDV 203
                                                  V    KSGGLGDL YPL+SDV
Sbjct: 122 TFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDV 181

Query: 204 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQE 248
           TKSISKS+GVLI DQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQY   
Sbjct: 182 TKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYT-G 241

[Close]

BLAST of CmoCh06G005100 vs. ExPASy Swiss-Prot
Match: Q96468 (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=BAS1 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-58
Identity = 132/207 (63.77%), Postives = 141/207 (68.12%), Query Frame = 0


Query: 88  RSFAVRASSE--LPLVGNVAPDFEAEAVFDQEFIKVILHG-LGFGYCLFLF--------- 147
           RSF  RA++E  LPLVGN APDF AEAVFDQEFI V L   +G  Y +  F         
Sbjct: 5   RSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVC 64

Query: 148 -----------------------------------VVIRLKSGGLGDLQYPLVSDVTKSI 207
                                              V    KSGGLGDL+YPLVSDVTKSI
Sbjct: 65  PTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSI 124

Query: 208 SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDE 248
           SKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQYV++ PDE
Sbjct: 125 SKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLQALQYVKK-PDE 184

[Close]

BLAST of CmoCh06G005100 vs. ExPASy Swiss-Prot
Match: Q6ER94 (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAS1 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-58
Identity = 153/277 (55.23%), Postives = 172/277 (62.09%), Query Frame = 0


Query: 21  ACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSA---PRS 80
           AC ++ ATA +  S+ P A       P A AP S  L+LP++         P+A     S
Sbjct: 3   ACCSSLATAVSSSSAKPLA-----GIPPA-APHS--LSLPRA---------PAARPLRLS 62

Query: 81  ISSSRGARSRRSFAVRAS--SELPLVGNVAPDFEAEAVFDQEFIKVILHG-LGFGYCLFL 140
            SSSR AR+  SF  RA    + PLVGN APDF+AEAVFDQEFI V L   +G  Y +  
Sbjct: 63  ASSSRSARA-SSFVARAGGVDDAPLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILF 122

Query: 141 F--------------------------------------------VVIRLKSGGLGDLQY 200
           F                                            V    KSGGLGDL+Y
Sbjct: 123 FYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDSVFSHLAWVQTDRKSGGLGDLKY 182

Query: 201 PLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQA 248
           PL+SDVTKSISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNL IGRSVDET RTLQA
Sbjct: 183 PLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTLQA 242

[Close]

BLAST of CmoCh06G005100 vs. ExPASy TrEMBL
Match: A0A6J1FPJ7 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111446096 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.4e-101
Identity = 215/274 (78.47%), Postives = 217/274 (79.20%), Query Frame = 0


Query: 20  MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSIS 79
           MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSIS
Sbjct: 1   MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSIS 60

Query: 80  SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF--- 139
           SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKV L   +G  Y +  F   
Sbjct: 61  SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPL 120

Query: 140 -----------------------------------------VVIRLKSGGLGDLQYPLVS 199
                                                    V    KSGGLGDLQYPLVS
Sbjct: 121 DFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVS 180

Query: 200 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 249
           DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV
Sbjct: 181 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 240

[Close]

BLAST of CmoCh06G005100 vs. ExPASy TrEMBL
Match: A0A6J1KVK9 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111498589 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97
Identity = 212/274 (77.37%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 20  MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSIS 79
           MACSA  ATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSA RSIS
Sbjct: 1   MACSA--ATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSALRSIS 60

Query: 80  SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF--- 139
           SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKV L   +G  Y +  F   
Sbjct: 61  SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPL 120

Query: 140 -----------------------------------------VVIRLKSGGLGDLQYPLVS 199
                                                    V    KSGGLGDLQYPLVS
Sbjct: 121 DFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVS 180

Query: 200 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 249
           DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV
Sbjct: 181 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 240

[Close]

BLAST of CmoCh06G005100 vs. ExPASy TrEMBL
Match: A0A6J1J132 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111481726 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.9e-90
Identity = 197/274 (71.90%), Postives = 205/274 (74.82%), Query Frame = 0


Query: 20  MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSIS 79
           MACSAA   ++AL SSNPSAFP KS AP ASAP SR LALPKSFVGLRKSFQ SAPRS S
Sbjct: 1   MACSAA---SSALISSNPSAFPTKSTAPIASAPFSRTLALPKSFVGLRKSFQSSAPRSFS 60

Query: 80  SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF--- 139
           S+RGARSRRSFAVRASSELPLVGN+APDFEAEAVFDQEFIKV L   +G  Y +  F   
Sbjct: 61  STRGARSRRSFAVRASSELPLVGNIAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPL 120

Query: 140 -----------------------------------------VVIRLKSGGLGDLQYPLVS 199
                                                    V    KSGGLGDLQYPLVS
Sbjct: 121 DFTFVCPTEITAFSDRYEEFKQLNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVS 180

Query: 200 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 249
           DVTKSISKS+GVLIPDQGIALRGLFIIDKEG+IQHSTINNL IGRSVDETKRTLQALQYV
Sbjct: 181 DVTKSISKSFGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYV 240

[Close]

BLAST of CmoCh06G005100 vs. ExPASy TrEMBL
Match: A0A6J1F8M0 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111441835 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.0e-89
Identity = 196/274 (71.53%), Postives = 204/274 (74.45%), Query Frame = 0


Query: 20  MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSIS 79
           MACSAA   ++AL SSNPSAFP KS AP ASA  SR LALPKSFVGLRKSFQ SAPRS S
Sbjct: 1   MACSAA---SSALISSNPSAFPTKSTAPIASASFSRTLALPKSFVGLRKSFQSSAPRSFS 60

Query: 80  SSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF--- 139
           S+RGARSRRSFAVRASSELPLVGN+APDFEAEAVFDQEFIKV L   +G  Y +  F   
Sbjct: 61  STRGARSRRSFAVRASSELPLVGNIAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPL 120

Query: 140 -----------------------------------------VVIRLKSGGLGDLQYPLVS 199
                                                    V    KSGGLGDLQYPLVS
Sbjct: 121 DFTFVCPTEITAFSDRYEEFKQLNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVS 180

Query: 200 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 249
           DVTKSISKS+GVLIPDQGIALRGLFIIDKEG+IQHSTINNL IGRSVDETKRTLQALQYV
Sbjct: 181 DVTKSISKSFGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYV 240

[Close]

BLAST of CmoCh06G005100 vs. ExPASy TrEMBL
Match: A0A0A0LB09 (Thioredoxin-dependent peroxiredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G778410 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.5e-89
Identity = 197/276 (71.38%), Postives = 205/276 (74.28%), Query Frame = 0


Query: 20  MACSAATATATALFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSI- 79
           MACSAA   +TAL SSNPS+FPAKSN P ASAP SR LALPKSF+GLRKSFQPSAPRS  
Sbjct: 1   MACSAA---STALISSNPSSFPAKSNPPIASAPFSRTLALPKSFLGLRKSFQPSAPRSFS 60

Query: 80  -SSSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF- 139
            SSSRG RSR SF+VRASSELPLVGNVAPDFEAEAVFDQEFIKV L   +G  Y +  F 
Sbjct: 61  SSSSRGTRSRPSFSVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFY 120

Query: 140 -------------------------------------------VVIRLKSGGLGDLQYPL 199
                                                      V    KSGGLGDLQYPL
Sbjct: 121 PLDFTFVCPTEITAFSDRYDEFKQLNTEVLGVSIDSVFSHLAWVQTDRKSGGLGDLQYPL 180

Query: 200 VSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQ 249
           VSDVTKSISKSYGVLIPDQGIALRGLFIIDKEG+IQHSTINNL IGRSVDETKRTLQALQ
Sbjct: 181 VSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQ 240

[Close]

BLAST of CmoCh06G005100 vs. TAIR 10
Match: AT3G11630.1 (Thioredoxin superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-66
Identity = 157/271 (57.93%), Postives = 174/271 (64.21%), Query Frame = 0


Query: 24  AATATATALFSSNPS-AFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSR 83
           A+ A++T L SS  S  FPAKS+  + S    R L+ P +   LR  F      +  SS 
Sbjct: 2   ASVASSTTLISSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGF------ARRSSL 61

Query: 84  GARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVILHG-LGFGYCLFLF----- 143
            + SRRSFAV+A + +LPLVGN APDFEAEAVFDQEFIKV L   +G  Y +  F     
Sbjct: 62  SSTSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDF 121

Query: 144 ---------------------------------------VVIRLKSGGLGDLQYPLVSDV 203
                                                  V    KSGGLGDL YPL+SDV
Sbjct: 122 TFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDV 181

Query: 204 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQE 248
           TKSISKS+GVLI DQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQALQY+QE
Sbjct: 182 TKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQE 241

[Close]

BLAST of CmoCh06G005100 vs. TAIR 10
Match: AT5G06290.1 (2-cysteine peroxiredoxin B )

HSP 1 Score: 241.1 bits (614), Expect = 9.3e-64
Identity = 158/276 (57.25%), Postives = 180/276 (65.22%), Query Frame = 0


Query: 23  SAATATATALFSSNPSAFPAKSN--APTASAPSSRNLALPKSFV---GLRKSFQPSAPRS 82
           S A++++T L SS+    P+KS+  +PT S P      +P S      L   F  S+  S
Sbjct: 5   SIASSSSTTLLSSSRVLLPSKSSLLSPTVSFPR----IIPSSSASSSSLCSGF--SSLGS 64

Query: 83  ISSSRGARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVIL-HGLGFGYCLFLF 142
           ++++R A SRR+FAV+A + +LPLVGN APDFEAEAVFDQEFIKV L   +G  Y +  F
Sbjct: 65  LTTNRSA-SRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFF 124

Query: 143 --------------------------------------------VVIRLKSGGLGDLQYP 202
                                                       V    KSGGLGDL YP
Sbjct: 125 YPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYP 184

Query: 203 LVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQAL 248
           LVSD+TKSISKS+GVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDET RTLQAL
Sbjct: 185 LVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQAL 244

The following BLAST results are available for this feature:

BLAST of CmoCh06G005100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96291	4.8e-65	57.93	2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAS1 ...	[more]
Q9C5R8	1.3e-62	57.25	2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O24364	8.5e-62	57.20	2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea OX=3562 GN=BAS1 PE=...	[more]
Q96468	1.2e-58	63.77	2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN...	[more]
Q6ER94	1.5e-58	55.23	2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CmoCh06G005100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPJ7	7.4e-101	78.47	Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC11144609...	[more]
A0A6J1KVK9	2.2e-97	77.37	Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111498589 ...	[more]
A0A6J1J132	5.9e-90	71.90	Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111481726 ...	[more]
A0A6J1F8M0	5.0e-89	71.53	Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC11144183...	[more]
A0A0A0LB09	6.5e-89	71.38	Thioredoxin-dependent peroxiredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G778410 P...	[more]

BLAST of CmoCh06G005100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11630.1	3.4e-66	57.93	Thioredoxin superfamily protein	[more]
AT5G06290.1	9.3e-64	57.25	2-cysteine peroxiredoxin B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	PFAM	PF00578	AhpC-TSA	coord: 148..189 e-value: 1.1E-9 score: 38.3
IPR019479	Peroxiredoxin, C-terminal	PFAM	PF10417	1-cysPrx_C	coord: 210..245 e-value: 2.5E-11 score: 43.2
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 130..248 e-value: 5.8E-39 score: 135.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..248
None	No IPR available	PANTHER	PTHR10681	THIOREDOXIN PEROXIDASE	coord: 136..247
None	No IPR available	PANTHER	PTHR10681:SF153	2-CYS PEROXIREDOXIN BAS1, CHLOROPLASTIC-LIKE	coord: 59..135
None	No IPR available	PANTHER	PTHR10681	THIOREDOXIN PEROXIDASE	coord: 59..135
None	No IPR available	PANTHER	PTHR10681:SF153	2-CYS PEROXIREDOXIN BAS1, CHLOROPLASTIC-LIKE	coord: 136..247
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 99..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G005100.1	CmoCh06G005100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0098869	cellular oxidant detoxification
molecular_function	GO:0051920	peroxiredoxin activity
molecular_function	GO:0016209	antioxidant activity
molecular_function	GO:0016491	oxidoreductase activity