Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAACCGACGGGCACTGCCACGTCAGACTGGCCCCCACCACGTGACGAACTTTCGGTGCAAATTTTCACTTTCCCCAATTTTCCTTCAATTCTCCACTTCACCGTCGATCCGCCGCGGTTCCTTTTTGCAAATACACAAATGGACTCTTCCCCCGCCGCCGCTTCCGCCGCTGCTAGTGCCTTTACTCTCCGGCATTCCTCTTCTCCTAGCCATCACTACCTCGATCTCTTCTCTTCCCCGCCGCCGTTATCCCCCTCTGCTGTCGCCAGCTCTGATGAGTTCAACGAATCAGAGGTCTTCTGGACCTCTGATTTCGCGCAATCCAATAACCGTCCGTTTCGCACGAGAAAAATATCTACCGAAGATCGCACCTCGAGTTTCGACCTTCCAAACTCCGGTATCCTCGCTGCCTTATCAGATGATGCCGATTTTAATAGCAAACAGAGAATCGGTACGATTGTCACTCGAGAGACTTCAATGGCTATGGCTATATCCTCCTCATCGTCACGATCGATTCCGAAGCCGATTCAGAGCAGTAGAGAATATTCTCAATCGATGCCGTCTAGGAAGTTTCAGCAATCGGCGCCGATTAACGTGCCGAAGGCGATGAGGAAACAGAGGATTAATGACGAGATTTGTGCGGCGGCGGAGGAGGAGGAGGATGAAGAGATGCTGCCGCCGCATGAGATCGTGGCAAGAGGCGTGGGCGTGATGCCGAACACGACATTTTCGATGCTGGAAGGCGTTGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAAGTCAGAAACGCGGTATGGCACAGAACAGGTTTTGTTGATTGA
mRNA sequence
ATGAGGAAACCGACGGGCACTGCCACGTCAGACTGGCCCCCACCACGTGACGAACTTTCGGTGCAAATTTTCACTTTCCCCAATTTTCCTTCAATTCTCCACTTCACCGTCGATCCGCCGCGGTTCCTTTTTGCAAATACACAAATGGACTCTTCCCCCGCCGCCGCTTCCGCCGCTGCTAGTGCCTTTACTCTCCGGCATTCCTCTTCTCCTAGCCATCACTACCTCGATCTCTTCTCTTCCCCGCCGCCGTTATCCCCCTCTGCTGTCGCCAGCTCTGATGAGTTCAACGAATCAGAGGTCTTCTGGACCTCTGATTTCGCGCAATCCAATAACCGTCCGTTTCGCACGAGAAAAATATCTACCGAAGATCGCACCTCGAGTTTCGACCTTCCAAACTCCGGTATCCTCGCTGCCTTATCAGATGATGCCGATTTTAATAGCAAACAGAGAATCGGTACGATTGTCACTCGAGAGACTTCAATGGCTATGGCTATATCCTCCTCATCGTCACGATCGATTCCGAAGCCGATTCAGAGCAGTAGAGAATATTCTCAATCGATGCCGTCTAGGAAGTTTCAGCAATCGGCGCCGATTAACGTGCCGAAGGCGATGAGGAAACAGAGGATTAATGACGAGATTTGTGCGGCGGCGGAGGAGGAGGAGGATGAAGAGATGCTGCCGCCGCATGAGATCGTGGCAAGAGGCGTGGGCGTGATGCCGAACACGACATTTTCGATGCTGGAAGGCGTTGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAAGTCAGAAACGCGGTATGGCACAGAACAGGTTTTGTTGATTGA
Coding sequence (CDS)
ATGAGGAAACCGACGGGCACTGCCACGTCAGACTGGCCCCCACCACGTGACGAACTTTCGGTGCAAATTTTCACTTTCCCCAATTTTCCTTCAATTCTCCACTTCACCGTCGATCCGCCGCGGTTCCTTTTTGCAAATACACAAATGGACTCTTCCCCCGCCGCCGCTTCCGCCGCTGCTAGTGCCTTTACTCTCCGGCATTCCTCTTCTCCTAGCCATCACTACCTCGATCTCTTCTCTTCCCCGCCGCCGTTATCCCCCTCTGCTGTCGCCAGCTCTGATGAGTTCAACGAATCAGAGGTCTTCTGGACCTCTGATTTCGCGCAATCCAATAACCGTCCGTTTCGCACGAGAAAAATATCTACCGAAGATCGCACCTCGAGTTTCGACCTTCCAAACTCCGGTATCCTCGCTGCCTTATCAGATGATGCCGATTTTAATAGCAAACAGAGAATCGGTACGATTGTCACTCGAGAGACTTCAATGGCTATGGCTATATCCTCCTCATCGTCACGATCGATTCCGAAGCCGATTCAGAGCAGTAGAGAATATTCTCAATCGATGCCGTCTAGGAAGTTTCAGCAATCGGCGCCGATTAACGTGCCGAAGGCGATGAGGAAACAGAGGATTAATGACGAGATTTGTGCGGCGGCGGAGGAGGAGGAGGATGAAGAGATGCTGCCGCCGCATGAGATCGTGGCAAGAGGCGTGGGCGTGATGCCGAACACGACATTTTCGATGCTGGAAGGCGTTGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAAGTCAGAAACGCGGTATGGCACAGAACAGGTTTTGTTGATTGA
Protein sequence
MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSPAAASAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD
Homology
BLAST of CmoCh06G004920 vs. ExPASy TrEMBL
Match:
A0A6J1FXK6 (uncharacterized protein LOC111448027 OS=Cucurbita moschata OX=3662 GN=LOC111448027 PE=4 SV=1)
HSP 1 Score: 534.3 bits (1375), Expect = 3.1e-148
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query: 1 MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSPAAASAAA 60
MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSPAAASAAA
Sbjct: 1 MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSPAAASAAA 60
Query: 61 SAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI 120
SAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI
Sbjct: 61 SAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI 120
Query: 121 STEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQS 180
STEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQS
Sbjct: 121 STEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQS 180
Query: 181 SREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGVGVM 240
SREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGVGVM
Sbjct: 181 SREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGVGVM 240
Query: 241 PNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
PNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD
Sbjct: 241 PNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 275
BLAST of CmoCh06G004920 vs. ExPASy TrEMBL
Match:
A0A6J1L041 (uncharacterized protein LOC111498642 OS=Cucurbita maxima OX=3661 GN=LOC111498642 PE=4 SV=1)
HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-107
Identity = 215/227 (94.71%), Postives = 217/227 (95.59%), Query Frame = 0
Query: 49 MDSSPAAASAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFA 108
MDSSP AAASAFTLRHSSSPSHHYLDLFSSPPPLSPS VASSDEFNESEVFWTSDFA
Sbjct: 1 MDSSP----AAASAFTLRHSSSPSHHYLDLFSSPPPLSPSVVASSDEFNESEVFWTSDFA 60
Query: 109 QSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISS 168
QSNNRPFRTRKISTEDRTSSFD PNSGILAALSDDADFNSKQRIGTIVTRET+MAMAISS
Sbjct: 61 QSNNRPFRTRKISTEDRTSSFDPPNSGILAALSDDADFNSKQRIGTIVTRETTMAMAISS 120
Query: 169 SSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLP 228
SSSR IPKPIQSS+EYSQSMPSRKFQQSAPINVPKAMRKQR NDEI AAEEEEDEEMLP
Sbjct: 121 SSSRWIPKPIQSSKEYSQSMPSRKFQQSAPINVPKAMRKQRNNDEI-RAAEEEEDEEMLP 180
Query: 229 PHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
PHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD
Sbjct: 181 PHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 222
BLAST of CmoCh06G004920 vs. ExPASy TrEMBL
Match:
A0A5A7TLX9 (Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001930 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 147/218 (67.43%), Postives = 176/218 (80.73%), Query Frame = 0
Query: 59 AASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTR 118
A +A LRHSS SHH+L SSPP +P AV+ SDEFNESE+FWT+DF S+N R+R
Sbjct: 6 ATAASLLRHSSPSSHHFLHFSSSPPSQTPPAVSPSDEFNESELFWTADFVSSSNNSSRSR 65
Query: 119 KISTEDRTSSF-DLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKP 178
+IS++DR SSF PNSGILAALSDD+ +N K+RIGTI+TR+TS+ + SSS RSIP+P
Sbjct: 66 RISSDDRASSFIPPPNSGILAALSDDSSYNRKKRIGTILTRDTSITKS-PSSSMRSIPRP 125
Query: 179 IQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGV 238
+QS+R+YSQS+P RKFQQSAPI VP+AMRK R N E EEEE+E+MLPPHEIV RG
Sbjct: 126 VQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRNNGE-HVEREEEEEEQMLPPHEIVRRGS 185
Query: 239 GVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
G+ PNTTFS+LEG GRTLKGRDLR+VRNAVWHRTGFVD
Sbjct: 186 GMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 221
BLAST of CmoCh06G004920 vs. ExPASy TrEMBL
Match:
A0A1S3B6S2 (uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 147/218 (67.43%), Postives = 176/218 (80.73%), Query Frame = 0
Query: 59 AASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTR 118
A +A LRHSS SHH+L SSPP +P AV+ SDEFNESE+FWT+DF S+N R+R
Sbjct: 6 ATAASLLRHSSPSSHHFLHFSSSPPSQTPPAVSPSDEFNESELFWTADFVSSSNNSSRSR 65
Query: 119 KISTEDRTSSF-DLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKP 178
+IS++DR SSF PNSGILAALSDD+ +N K+RIGTI+TR+TS+ + SSS RSIP+P
Sbjct: 66 RISSDDRASSFIPPPNSGILAALSDDSSYNRKKRIGTILTRDTSITKS-PSSSMRSIPRP 125
Query: 179 IQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGV 238
+QS+R+YSQS+P RKFQQSAPI VP+AMRK R N E EEEE+E+MLPPHEIV RG
Sbjct: 126 VQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRNNGE-HVEREEEEEEQMLPPHEIVRRGS 185
Query: 239 GVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
G+ PNTTFS+LEG GRTLKGRDLR+VRNAVWHRTGFVD
Sbjct: 186 GMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 221
BLAST of CmoCh06G004920 vs. ExPASy TrEMBL
Match:
A0A0A0LAY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777630 PE=4 SV=1)
HSP 1 Score: 268.5 bits (685), Expect = 3.2e-68
Identity = 145/218 (66.51%), Postives = 174/218 (79.82%), Query Frame = 0
Query: 61 SAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI 120
+A L HSS SHH+L SSPP +P A++ SDEFNESE+FWT+DF QS+N R+RKI
Sbjct: 6 AASLLSHSSPSSHHFLHFSSSPPSHTPPALSPSDEFNESELFWTADFVQSSNNSSRSRKI 65
Query: 121 STEDRTSSF-DLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQ 180
ST+DR SSF PNSGILAALSDD +++ K+RIGTI+TR+T+ SSS+RSIP+P+Q
Sbjct: 66 STDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSIPRPVQ 125
Query: 181 SSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEE--MLPPHEIVARGV 240
S+REYSQS+P RKFQQSAPI VP+AMRK R + + EEEE+EE MLPPHEIV RG
Sbjct: 126 SNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVERKEEEEEEEEQMLPPHEIVRRGS 185
Query: 241 GVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
G+ PNTTFS+LEG GRTLKGRDLR+VRNAVWHRTGFVD
Sbjct: 186 GMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 223
BLAST of CmoCh06G004920 vs. TAIR 10
Match:
AT3G15040.1 (Protein of unknown function, DUF584 )
HSP 1 Score: 95.9 bits (237), Expect = 5.4e-20
Identity = 89/236 (37.71%), Postives = 124/236 (52.54%), Query Frame = 0
Query: 79 FSSPPPLSPSAVASSDEFNESEVFWTSDFAQSN--------NRPFRTRKISTEDRTSSFD 138
FSSP L+ + ++ E NE ++F D + + + P + + + + + S
Sbjct: 9 FSSPSSLATISDSADGELNEDDIF-AIDISHAPPQARHSPVSSPAKQQTPARQLQRSKSG 68
Query: 139 LPN---SGILAALSDDADFNS----------KQRIGTIVTRETSM-------AMAISSSS 198
L N SGILAAL + + +S + T V+ S A A SSSS
Sbjct: 69 LKNVEASGILAALPESSGSSSYLSHVFHHKPAAALSTSVSSTASSSSSSGGGASAGSSSS 128
Query: 199 SRSI---PKPIQSSREYSQS-MPSRKFQQSAPINVP---KAM----RKQRINDEICAAAE 258
+R+I PKP Q +S S + K+ QSAP+ VP AM +K+ ++ E
Sbjct: 129 ARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDVVDDDE 188
Query: 259 EEEDEEMLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
EEE+ EMLPPHEIVAR + + S+LEG GRTLKGRDLRQVRNAV+ RTGF+D
Sbjct: 189 EEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243
BLAST of CmoCh06G004920 vs. TAIR 10
Match:
AT4G04630.1 (Protein of unknown function, DUF584 )
HSP 1 Score: 76.6 bits (187), Expect = 3.4e-14
Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 0
Query: 167 SSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPK------AMRKQRINDEICAAAEE 226
SSSSS S P I+ S+E S Q SAP+NVP + R + + + A +
Sbjct: 55 SSSSSSSSPWNIRRSKEVSGVK-----QSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAAD 114
Query: 227 EEDEE----MLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
++DE+ M+PPHE VAR + ++FSM EGVGRTLKGRDL +VRNAV +TGF++
Sbjct: 115 DDDEDDDGCMVPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168
BLAST of CmoCh06G004920 vs. TAIR 10
Match:
AT4G21970.1 (Protein of unknown function, DUF584 )
HSP 1 Score: 75.9 bits (185), Expect = 5.8e-14
Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 0
Query: 156 VTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPK-----AMRKQRI 215
+++ ++ A SSSS+R IPK + S QS SAP+N+P K+
Sbjct: 28 MSKSNNLFSASSSSSARYIPKGNEVSGGAKQS--------SAPMNIPDWSKVYGYSKKNT 87
Query: 216 NDEICAAAEEEEDE-EMLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWH 275
+ + + A +++DE M+PPHE+VA+ + ++FSM EG+GRTLKGRDL + RNAV
Sbjct: 88 SSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLT 145
BLAST of CmoCh06G004920 vs. TAIR 10
Match:
AT1G11700.1 (Protein of unknown function, DUF584 )
HSP 1 Score: 70.1 bits (170), Expect = 3.2e-12
Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = 0
Query: 191 RKFQQSAPINVPKAMRKQRIND-EICAAAEEEEDEE---MLPPHEIVARGVGVMPNTT-- 250
R+ SAP+NVP + R+N E ++EEE+E+ M+PPHE +A+ +
Sbjct: 110 RQLASSAPVNVPDWSKIYRVNSVESIHESDEEEEEDSGMMMPPHEYLAKSQQRRSRKSGG 169
Query: 251 -FSMLEGVGRTLKGRDLRQVRNAVWHRTGF 274
S+ EGVGRTLKGR+LR+VR+A+W +TGF
Sbjct: 170 GGSVFEGVGRTLKGRELRRVRDAIWSQTGF 199
BLAST of CmoCh06G004920 vs. TAIR 10
Match:
AT1G61930.1 (Protein of unknown function, DUF584 )
HSP 1 Score: 62.4 bits (150), Expect = 6.6e-10
Identity = 46/139 (33.09%), Postives = 70/139 (50.36%), Query Frame = 0
Query: 144 ADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPK 203
A R+G + +A SSS + K E + RK SAP+NVP
Sbjct: 65 ATLGKNGRVGGLSLAFEGSLVAPPSSSPMIVQKIHGGGGEGEED--RRKLASSAPVNVPD 124
Query: 204 AMRKQRIND-----EICAAAEEEEDEEMLPPHEIVARGVG----VMPNTTFSMLEGVGRT 263
+ R++ E+ +E+E+ M+PPHE +A+ + S+ +GVGRT
Sbjct: 125 WSKIYRVDSVESIHELDDEDDEDEESGMMPPHEYLAKSQARRSRKIGGGGASVFDGVGRT 184
Query: 264 LKGRDLRQVRNAVWHRTGF 274
LKGR+LR+VR+A+W +TGF
Sbjct: 185 LKGRELRRVRDAIWSQTGF 201
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FXK6 | 3.1e-148 | 100.00 | uncharacterized protein LOC111448027 OS=Cucurbita moschata OX=3662 GN=LOC1114480... | [more] |
A0A6J1L041 | 1.2e-107 | 94.71 | uncharacterized protein LOC111498642 OS=Cucurbita maxima OX=3661 GN=LOC111498642... | [more] |
A0A5A7TLX9 | 1.7e-69 | 67.43 | Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236... | [more] |
A0A1S3B6S2 | 1.7e-69 | 67.43 | uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=... | [more] |
A0A0A0LAY5 | 3.2e-68 | 66.51 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777630 PE=4 SV=1 | [more] |