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CmoCh06G004860 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGATTCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGAAGATTTGTGGTACCGACTAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTCGATCAAAGAAATGGTCTCGTGGTTCCTTGCAATGTTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTCGTTTGA ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGATTCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGAAGATTTGTGGTACCGACTAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTCGATCAAAGAAATGGTCTCGTGGTTCCTTGCAATGTTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTCGTTTGA ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGATTCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGAAGATTTGTGGTACCGACTAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTCGATCAAAGAAATGGTCTCGTGGTTCCTTGCAATGTTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTCGTTTGA MLKKRIPSLKKLVKTNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFHFGEHVHEFV Homology
BLAST of CmoCh06G004860 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10 Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.8e-10 Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10 Identity = 32/95 (33.68%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy TrEMBL
Match: A0A5A7TKN6 (Auxin-responsive protein SAUR15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002080 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.4e-41 Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy TrEMBL
Match: A0A0A0LAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777530 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.0e-40 Identity = 87/120 (72.50%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy TrEMBL
Match: A0A2K3P6J9 (SAUR family protein OS=Trifolium pratense OX=57577 GN=L195_g007511 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 6.8e-28 Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy TrEMBL
Match: A0A438JSC1 (Auxin-responsive protein SAUR50 OS=Vitis vinifera OX=29760 GN=SAUR50_6 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27 Identity = 70/126 (55.56%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CmoCh06G004860 vs. ExPASy TrEMBL
Match: D7TJ88 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g03120 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27 Identity = 70/126 (55.56%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CmoCh06G004860 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 91.3 bits (225), Expect = 5.7e-19 Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 0
BLAST of CmoCh06G004860 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 81.6 bits (200), Expect = 4.5e-16 Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh06G004860 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 81.6 bits (200), Expect = 4.5e-16 Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh06G004860 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 77.8 bits (190), Expect = 6.5e-15 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CmoCh06G004860 vs. TAIR 10
Match: AT5G66260.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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