CmoCh06G004460 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G004460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polyadenylation and cleavage factor homolog 4-like isoform X2
Location	Cmo_Chr06: 2134450 .. 2141630 (+)
RNA-Seq Expression	CmoCh06G004460
Synteny	CmoCh06G004460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACGAGGGAACCGGGTTTGAAGAAGCAGCGACTGGCCGATGAGGCTGAGCGCGGTGGGAACATTAATGGCCGGCCGTTTCCGCAGAGACCAATTGGTTCGGGGACCAATATTGTGCAACCCAGATTTCGAGCAAGTGATAGAGATTCGGGAAGCAGTGATTCTGGTCGAGGGGGGTATCAGCCTCAACCACTGCAGCATCAGGAGCTTGTCAGCCAATACAGAACAGCCCTTGCTGAGCTGACTTTCAATTCGAAACCAATCATCACCAATTTGACCATAATCGCGGGTGAAAATCTCCAGGCTGCAAAAGCCATCTCTGCCACCGTTTGCGCCAACATTCTCGAGGTGAACCCAGTTTAAACTGTAGCAGCGTTTTGCATTCCTCTAATTGATATATCTTTTTTTTTTCCTTTCTTTTTCTACGTTTTGTGTGAATGACTGTATGGGAAATTAGTATAGAAGGAAAAGAGGAAATAAAAATGTTTTGTTGTTGACGTGCAGGAGTAAAATTGTAAGTGTAATGGTATTAATGAAATCCTTGAGTTTATACTGCGAGTTCAATTGTCTTTTGTAGAAAGTGCAATGTCTTGGTTGTGGAATATATAAATACCTCCTATAATACGTTGCTTAATGCGCTATCATCTTAGTACTTGAAATTACCTGATTTTTATTAGTAAAAGCTTTGTTTTTAATAGGAGGTGTTGTGATAATGGTGGTTTTGGTGTGGCTGTCATTCAGGCTGCTGGTATCAAATGAGACTTTGCGACGATATCTTAGTTACTCTTATAAGGTTGATTATATATTGAGCTAATTGCAAATTTAATTTATAAATCGAATTGAACCGCTGTGGAGCTTGTCTTCTGTAATTGATTGACTCCCTTGTGTACTGAAATTGATGGTTATATTTGTTGGTTTGCTGTTAATTAAATTGATGCTAAATCCGTTATTCAGGGACAATAAATAAATCTGTACCCAATAAAACTACCAATTGAAATATAAGCACCGATCTGAGTTAACAGGTGATACCATTTTGACAGGAAGCTAAAAATCTTTCATCTATATGATAGATCATTGATCTGGTAAGATTTTAGCAGGTTTGATGAGCTAGGATAGTAGATAAAATTCACGTGCTTTTTTGTGAATTTGTGTATGTTGAAAGAAGCTCTCTATTCAACCAGAAAAAATGTTGCACAAAATTTCTCCGGACACTTGGAGTTGCTAGTTTGACTGCATTGTAGTTGAAGTTTTGATGCCTTAGGTCTTCCTATCATGCTAATCCCGTTTATTAAGGGGCTTTGTGGAGTTTCTTCTCTTCTCCTAGTCCTAGTGAAGCTTGAAATGTGAAATGCTACTAGGGAAGGATTAGTGAGTTTTAATGTGTTGTGCACCTCATATTATGTTGTTCCAGTAAGCAGAAATGGATATAGTCACGCACCAGTTTTTAAACCTAGATGTGATTCTCTAAGGTTACTTTGCTCCTAATTTCCTCTTACTTGTGTGTGCTTCTGGAGTAATGTTTGAGCACTAGAACTATTGTTCTACCACTTTGTTATTTTTATAACGATGATCTCCAAGACTGCTGGAGGTTTGATTCCCTTGATATGTGTGGCGTGCATTGAGGCTTGTGATTCAATGCATGTTACTAGTTTGCTGCCGGAAAATTTTTGAACAGTTAACTTGTTTGCCCTCCCGTGCACCCGCCTTAGGCTATTTTAATATTTCAAGAGAATGCAGTATTTGCTGCCTTGAAGCTTGATTAGCCATCAAATACAACAGTAGTGCAGTATTTATCTCCAATCACGTTTGACAAATGAATTGAGTTACTGATTTGCTGCCTTGGCACCTAAGATTTAACCTTTCTCCCTCATTTAAAGATCCAAACAAATATTATATATTGTCATATTTATCTCAGATTATGTGTATGAACACTTCGATGCACATCTATATGTGTTTTTATGTATTCTTATTTTAGTATGATATGCATCGTAATACTGTACTATTTTTCTCTCTAAAACTGGGTATGACTGTTGTTGGTAGTTACATAAGGTCATTTCTCTACATTATTTGAAGCAGTCTGTAACTTGTTTGTGTGTGTGTGTATGGATGCATGTGCATGTACAATATGCTTGCTGATGAGAATTCAATTCCTTTTTATGGGCATTTATGTTTGGCCCTACAATTGTCAATTGTTCATCTGGCAATCTTGATGCTATATTAATTTCTTATATATGTGCCAGGTTTCCAGTGAGCAGAAGCTACCATCACTTTATCTATTGGACAGTATTGTGAAGAATATTGGAAGAGACTACATAAAATACTTTGCAGCAAAGCTGCCCGAGGTTAGATTTTTGCTCTGTGCCCTCTCCCTGCCAAGAGACACTCCCCCCTCCCCCCCTGCGGAACAAAATAAATTGTATGTCTGTGTCTACACTAAGTAATGCTTCAGAATGCTTCCTCGATGCTTTTTCAGTATCATTGTTCATTTTCTTGAACTGGTATGAAGATAGCAACATTTATGTCATTTTCCAGCATTATTTAACCAGTAACCTGCGTCTCATCAAGTACACCAATTCTATAGTAGTATGCATTACTACTCATTGTATATCGATTATCCCAAATTTATAGTATTTTTTTTCTATCTTTTTTTAGGTATTCTGCAAAGCTTATAGGCAAGTTGACTCTCCTGTACATACAAGTATGAGACATCTTTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAAACACTGCAGGTTATCGAGAAAGAACTTGGCTTCATAACCAACAGTGGTTCTTCTTCTGGGACCATATCCTCAAAGCCAGAATTGCATTCACAACGTCCACCCCATAGTATCCATGTAAATCCCAAGTATATAGAGAGACAACGGCTTCAACAGTCGGGCAGGGTTAGTGAAGTTCTGTTTCCACTATCAGCTATGATCCTCACAATTGTTCATTTGTCCTTCTCATAGATTGAAGTCATTATTGGCTTGTATAAGTGTGACCGTTTAATCTGAGAATCTGTTGTATATACTCTAGATTAAGTAGACAACTGATACTTGGTGATGTTTTCCTGTTTTCATCCAAACTATGATGTCTTTATTCTTTCCATTGACATAAATTAATAACCCATTCATCTTTTTATTGTGTGTAGAAATAGATTTGTTTTCTAGGGTACTTAACCTATACTTTTTTTAACCCAAGAATCTCCTCAAGTTGTGAAGTGGACTTGTTACTCTTTTTTATTGTCCTTATTTGATTTTTTTTTTTTTTTTTTTTTACGTGGGGCAGGTGAAAGGAATGACTAGTGACGCTACTATTGCAACTACAAATGTAACTCAGGATGTTGCCCAAGCCAAAATTAGCACTGGACGTCCATGGGCAGATGCTTCAATTAAAGTGCATGTAATTTTTTTTTTTTTTTTAGTTCACATTAGTCATTAGTTTTTCATTCCCTCATGATCAACACCATGGTATAAATCTTGCAGGACATTCAGCGTCCACTTAGAGATGCACCAAATGATATAGCACAAGAGAAGAACATCACGGCTGCATATGCAGATTATGAATATGGTTCCGATCTTTCAAGGACTCCAGGTATCGGAAGAAGGGCTGTTGATGAAGGGCGAGACAAACCCTGGTCTACAACTGGTAGCAATTTGGCAGAGAAGTTATCTGGCCAAAGAAATGGGTTCAACATCAAGCTTGGATATGAAAATTATCCTGCACCCAGGTCTGCAAACACTGGTGCACGTCTACTGCCCACACAAAATTTTTCAAGCAGCAGCAGCAACCGAGGATTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTTATGTGGGGTGAAATGAACTCTATGTTGACAGGTCATGGTGCATCTGCCATTGCCAGTAGCATTGGGAAAGATCAATGGACTCCTGAGGATTCAGATAATTCGGTAAAGCTTGAATATAATTGAGGGAACCACTTTTTCCTGGTCTATGATATCTTATAATACCAATAACTTCACTAGTTACATTAGAAAGAGAAAAATGTGATTGCTACATATTTCCATTTTTGTGTGCATTTTTCTGGTTTGCCAACTGTGAACAATTGACCATGTCTTATTTGATTTATTGTTGAGTTGGTTTCTACGTGCAGGGTATTGAAAATAAGCTATTAAGTTTACGAGATACTGGGGGAAGTGTTGATAGAGAAGCTTCCAGTGATTCACAATCATCTGAGCAGAGAGAACTGGGGGATTCTGGACAGCAAAGGTCATCAATGTGGCAAGTGCAGGAGCCATTATCTCTGGATGGGCTGAGAGGCGGGATTCCTAAAAAGAATTCAGCTCAGTCAGGAGGATATGGTGCCACTCTTACTGCCCTGTCAGGTGGTAACTCTTCTGTGGATCAAATGGGAGGTCGACCACAAATTACATCGTCGAATATTGGAGCTTCAGGACATGAATTTCTGAACAAGGGAGGTTCAGGGTCCATTGGGACTGTAGGCCAGCAAATATTTCCATCACGAAATGTTGCATTCGCATCTGGACAGCCACCCTTGCATCAACGTCCCCCTTCACCATTGTCAGTGGATCATATTCCTCATCAAATGCCCAACCATAAAACTTCTTCATTTTCTAATCTTGACCCACGTAAAAGGCATTTACAGGATGCTTCCCTTGGTCGGCATCCCAACGTTCAGTCAGATAACCTTAAAAAACCACAGCCTCAGGACCGTCAAGCTGCAGCCTCCCCCATACCTACTTCTCAACCCAGGCAGCCGTTCTCTTTATCTGAGTCACTAAAACCTGATGTTAGGCAGTCCGAACTTTCAAGACAGCATGCAGTATCTATTCCAGGCACTGATTTTGGACCTCCTTCATCAGCTGGGACAGTTCCAGTTCGTTTACCTGCAGAAATTTTGGGAGAGACAAGCACTAGTAGTTTGTTGGCTGCTGTAATGAAGAGTGGAATTTTTTCCAACCATTCAATAGCCAGTAGCATGCAGCAGAATATCAGCTTCCAAGATGCAGGAAATATGCAACCCCATTCAAACGTCAAACCTCAACTACCAAGCCAGTCTTCTCCTGCCCATACTCAGACGACATTCTCAGAGCCAAAGACTGCGGGAGAATCTTCATTAGGTCCTCTTGAAAGCCCGTCAGCTCTGGTTAAGCTATCTCAAACTAAGGTAGAAGATACTCCGTTGCCATCTGATCCACCTTCACCCTCATCTCCTATGAATAGTGCATCCACGGAAACTTCAAATGTGGTAAACGACTCTTCTACCCCAATTTCTAACCTTTTGAGCTCATTGGTTGCAAAGGGCCTTATATCTGCTTCAAAAGGAGAGTTAACAAATAGTGCGACTTCCCAAATGACTGCGCAGCCTGAAAATTTGAAGTTAGGTGATGCTGTGACATGTTCTGTACCAGTTCCTTCCATCCCCGTTACTTCTTCCAGTCAATCATCTACGATACTTGAATCATCTTCAAAAGCTGCTGCTAAGAGCTCCACTAGTCCACCTCCATATGCCACAACTGAGATAACCAACCTCATAGGCTTTGAATTTAGTTCACATGTTATTCGAAAATTTCAGCCATCTGTGATCAGTGGACTCTTTGACGATATTCCATATCAATGTAAGATCTGTGGTCTGAGACTGAAACTTGAAGAACAGTTGGATACACACTTGCAGTGGCACACGTTAAGAACTGAGGCAAACAATTCAAATAGGGCACCAAGAAGATGGTATCCAAGTTCAGATGATTGGATTTCTGGAAATGATATACTCTTACATGATGCTGCCACTTCTCCGGACAGGTGTGACATGATGGAAGAAGTTAATGAGCCAATGGTACCTGCAGATGAAGATCATTTGGTCTGTGTTTTATGTGGTGAACTTTTTGAAGATTTTTATAGTCATGACTTGGATAAGTGGATGTTCAAAGGAGCAATGTATATCACCATCCCATCAGCGGTTAGTGAGAGAGGAAGCACAATTGAACAAGTTGCTAGAGGACCCATCGTTCACACAAAATGTATAACTGAAAGTTCACTACATGACTTGGGACTGGCAACTGATATTAAGATGGTAATGTTCTTGATTCTTTATACTTGTGCAGGACTTCATTTGGGTTTACAATCGTCCAGTGGTCTCCCTGATGACTTTATGTGTTGTTCCTAGACTTTTTTTTTTTTATTTCCTTCATGTTCTTTTATGGAACGATAGAGAGACTTGGAACATTACAAAATCATATTTTCGTTAATCTTCCAAACATACTGCTGAATGCTATAGCAGCGGACTGGTAAAGTCAGGGAAAAGGTAGAGCCTATTTTATGAACTGGTTTGGTAGAATCAAGTGTTTTGTTCCCCGTTTGAGATCGCACTTGCCATTCAATCAATGGAACACCTGAATCATAATCGTTTTCTTCTTTTAGTTCTCCATTGTGAGCCCTTTTTACTGACATTTAGGTCCTATAAAGCAGACCCTTTAAATTACATGATATTAGTGCCTACTCGTGTCAATACATTTTGACGACTGCCACTGCACACTGAAAATATGCTCAAATCTGCATCCCTGCCTTGTATTGATGCTGTGCTTGAGGTTGCATGCATTTTCTTGATGGTTGACACTTCTTTGCACACTGAAAATTTGCGTGTTATTAATCTAAGATTGTTTACATTGTGTCCAACCTACAGGAAATGGATGTATGATGCTTCCACTGCAAAACGTCATAGAGGAACAACTCTGGTGGAACGTCCTGCTCATGCAATCGGCGGGGTTACGAAAAGGGAGTATGAGTACGAGTGCTTCGCTTTTGATAGTTTTGTTGAGTGCCAAAAAAGATTATAGGGGAGTGGTAGCTCTATACTGGTATTTTCTAGCTTCCAAATTCCTTTTTGTTTTCCTTCTGTTTTTTGCCTACAAAAGATATATAGTTGAGAATACATCAATGCAATGATCATTTTTATTCAGATCTTGACCGTCTTGTGCGAATTTTCACTTAACATCAATATCTGCTGTTATAAATCTGAAGCAGTGCACCTCTAGTCCTGGCTGCTTCGCATCTCTATCGACGACGAACTAGCAAAGTGGTTTTGATTCACCATTACTTATTTTTCCCTGTAACTTTCCCTTCTCTTGGCTCTGCGTAG

mRNA sequence

ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACGAGGGAACCGGGTTTGAAGAAGCAGCGACTGGCCGATGAGGCTGAGCGCGGTGGGAACATTAATGGCCGGCCGTTTCCGCAGAGACCAATTGGTTCGGGGACCAATATTGTGCAACCCAGATTTCGAGCAAGTGATAGAGATTCGGGAAGCAGTGATTCTGGTCGAGGGGGGTATCAGCCTCAACCACTGCAGCATCAGGAGCTTGTCAGCCAATACAGAACAGCCCTTGCTGAGCTGACTTTCAATTCGAAACCAATCATCACCAATTTGACCATAATCGCGGGTGAAAATCTCCAGGCTGCAAAAGCCATCTCTGCCACCGTTTGCGCCAACATTCTCGAGGTTTCCAGTGAGCAGAAGCTACCATCACTTTATCTATTGGACAGTATTGTGAAGAATATTGGAAGAGACTACATAAAATACTTTGCAGCAAAGCTGCCCGAGGTATTCTGCAAAGCTTATAGGCAAGTTGACTCTCCTGTACATACAAGTATGAGACATCTTTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAAACACTGCAGGTTATCGAGAAAGAACTTGGCTTCATAACCAACAGTGGTTCTTCTTCTGGGACCATATCCTCAAAGCCAGAATTGCATTCACAACGTCCACCCCATAGTATCCATGTAAATCCCAAGTATATAGAGAGACAACGGCTTCAACAGTCGGGCAGGGTGAAAGGAATGACTAGTGACGCTACTATTGCAACTACAAATGTAACTCAGGATGTTGCCCAAGCCAAAATTAGCACTGGACGTCCATGGGCAGATGCTTCAATTAAAGTGCATGACATTCAGCGTCCACTTAGAGATGCACCAAATGATATAGCACAAGAGAAGAACATCACGGCTGCATATGCAGATTATGAATATGGTTCCGATCTTTCAAGGACTCCAGGTATCGGAAGAAGGGCTGTTGATGAAGGGCGAGACAAACCCTGGTCTACAACTGGTAGCAATTTGGCAGAGAAGTTATCTGGCCAAAGAAATGGGTTCAACATCAAGCTTGGATATGAAAATTATCCTGCACCCAGGTCTGCAAACACTGGTGCACGTCTACTGCCCACACAAAATTTTTCAAGCAGCAGCAGCAACCGAGGATTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTTATGTGGGGTGAAATGAACTCTATGTTGACAGGTCATGGTGCATCTGCCATTGCCAGTAGCATTGGGAAAGATCAATGGACTCCTGAGGATTCAGATAATTCGGGTATTGAAAATAAGCTATTAAGTTTACGAGATACTGGGGGAAGTGTTGATAGAGAAGCTTCCAGTGATTCACAATCATCTGAGCAGAGAGAACTGGGGGATTCTGGACAGCAAAGGTCATCAATGTGGCAAGTGCAGGAGCCATTATCTCTGGATGGGCTGAGAGGCGGGATTCCTAAAAAGAATTCAGCTCAGTCAGGAGGATATGGTGCCACTCTTACTGCCCTGTCAGGTGGTAACTCTTCTGTGGATCAAATGGGAGGTCGACCACAAATTACATCGTCGAATATTGGAGCTTCAGGACATGAATTTCTGAACAAGGGAGGTTCAGGGTCCATTGGGACTGTAGGCCAGCAAATATTTCCATCACGAAATGTTGCATTCGCATCTGGACAGCCACCCTTGCATCAACGTCCCCCTTCACCATTGTCAGTGGATCATATTCCTCATCAAATGCCCAACCATAAAACTTCTTCATTTTCTAATCTTGACCCACGTAAAAGGCATTTACAGGATGCTTCCCTTGGTCGGCATCCCAACGTTCAGTCAGATAACCTTAAAAAACCACAGCCTCAGGACCGTCAAGCTGCAGCCTCCCCCATACCTACTTCTCAACCCAGGCAGCCGTTCTCTTTATCTGAGTCACTAAAACCTGATGTTAGGCAGTCCGAACTTTCAAGACAGCATGCAGTATCTATTCCAGGCACTGATTTTGGACCTCCTTCATCAGCTGGGACAGTTCCAGTTCGTTTACCTGCAGAAATTTTGGGAGAGACAAGCACTAGTAGTTTGTTGGCTGCTGTAATGAAGAGTGGAATTTTTTCCAACCATTCAATAGCCAGTAGCATGCAGCAGAATATCAGCTTCCAAGATGCAGGAAATATGCAACCCCATTCAAACGTCAAACCTCAACTACCAAGCCAGTCTTCTCCTGCCCATACTCAGACGACATTCTCAGAGCCAAAGACTGCGGGAGAATCTTCATTAGGTCCTCTTGAAAGCCCGTCAGCTCTGGTTAAGCTATCTCAAACTAAGGTAGAAGATACTCCGTTGCCATCTGATCCACCTTCACCCTCATCTCCTATGAATAGTGCATCCACGGAAACTTCAAATGTGGTAAACGACTCTTCTACCCCAATTTCTAACCTTTTGAGCTCATTGGTTGCAAAGGGCCTTATATCTGCTTCAAAAGGAGAGTTAACAAATAGTGCGACTTCCCAAATGACTGCGCAGCCTGAAAATTTGAAGTTAGGTGATGCTGTGACATGTTCTGTACCAGTTCCTTCCATCCCCGTTACTTCTTCCAGTCAATCATCTACGATACTTGAATCATCTTCAAAAGCTGCTGCTAAGAGCTCCACTAGTCCACCTCCATATGCCACAACTGAGATAACCAACCTCATAGGCTTTGAATTTAGTTCACATGTTATTCGAAAATTTCAGCCATCTGTGATCAGTGGACTCTTTGACGATATTCCATATCAATGTAAGATCTGTGGTCTGAGACTGAAACTTGAAGAACAGTTGGATACACACTTGCAGTGGCACACGTTAAGAACTGAGGCAAACAATTCAAATAGGGCACCAAGAAGATGGTATCCAAGTTCAGATGATTGGATTTCTGGAAATGATATACTCTTACATGATGCTGCCACTTCTCCGGACAGGTGTGACATGATGGAAGAAGTTAATGAGCCAATGGTACCTGCAGATGAAGATCATTTGGTCTGTGTTTTATGTGGTGAACTTTTTGAAGATTTTTATAGTCATGACTTGGATAAGTGGATGTTCAAAGGAGCAATGTATATCACCATCCCATCAGCGGTTAGTGAGAGAGGAAGCACAATTGAACAAGTTGCTAGAGGACCCATCGTTCACACAAAATGTATAACTGAAAGTTCACTACATGACTTGGGACTGGCAACTGATATTAAGATGAATCAAGTGTTTTGTTCCCCGTTTGAGATCGCACTTGCCATTCAATCAATGGAACACCTGAATCATAATCGTTTTCTTCTTTTAGTTCTCCATTGAAATGGATGTATGATGCTTCCACTGCAAAACGTCATAGAGGAACAACTCTGGTGGAACGTCCTGCTCATGCAATCGGCGGGGTTACGAAAAGGGAGTATGAGTACGAGTGCTTCGCTTTTGATAGTTTTGTTGAGTGCCAAAAAAGATTATAGGGGAGTGGTAGCTCTATACTGTGCACCTCTAGTCCTGGCTGCTTCGCATCTCTATCGACGACGAACTAGCAAAGTGGTTTTGATTCACCATTACTTATTTTTCCCTGTAACTTTCCCTTCTCTTGGCTCTGCGTAG

Coding sequence (CDS)

ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACGAGGGAACCGGGTTTGAAGAAGCAGCGACTGGCCGATGAGGCTGAGCGCGGTGGGAACATTAATGGCCGGCCGTTTCCGCAGAGACCAATTGGTTCGGGGACCAATATTGTGCAACCCAGATTTCGAGCAAGTGATAGAGATTCGGGAAGCAGTGATTCTGGTCGAGGGGGGTATCAGCCTCAACCACTGCAGCATCAGGAGCTTGTCAGCCAATACAGAACAGCCCTTGCTGAGCTGACTTTCAATTCGAAACCAATCATCACCAATTTGACCATAATCGCGGGTGAAAATCTCCAGGCTGCAAAAGCCATCTCTGCCACCGTTTGCGCCAACATTCTCGAGGTTTCCAGTGAGCAGAAGCTACCATCACTTTATCTATTGGACAGTATTGTGAAGAATATTGGAAGAGACTACATAAAATACTTTGCAGCAAAGCTGCCCGAGGTATTCTGCAAAGCTTATAGGCAAGTTGACTCTCCTGTACATACAAGTATGAGACATCTTTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAAACACTGCAGGTTATCGAGAAAGAACTTGGCTTCATAACCAACAGTGGTTCTTCTTCTGGGACCATATCCTCAAAGCCAGAATTGCATTCACAACGTCCACCCCATAGTATCCATGTAAATCCCAAGTATATAGAGAGACAACGGCTTCAACAGTCGGGCAGGGTGAAAGGAATGACTAGTGACGCTACTATTGCAACTACAAATGTAACTCAGGATGTTGCCCAAGCCAAAATTAGCACTGGACGTCCATGGGCAGATGCTTCAATTAAAGTGCATGACATTCAGCGTCCACTTAGAGATGCACCAAATGATATAGCACAAGAGAAGAACATCACGGCTGCATATGCAGATTATGAATATGGTTCCGATCTTTCAAGGACTCCAGGTATCGGAAGAAGGGCTGTTGATGAAGGGCGAGACAAACCCTGGTCTACAACTGGTAGCAATTTGGCAGAGAAGTTATCTGGCCAAAGAAATGGGTTCAACATCAAGCTTGGATATGAAAATTATCCTGCACCCAGGTCTGCAAACACTGGTGCACGTCTACTGCCCACACAAAATTTTTCAAGCAGCAGCAGCAACCGAGGATTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTTATGTGGGGTGAAATGAACTCTATGTTGACAGGTCATGGTGCATCTGCCATTGCCAGTAGCATTGGGAAAGATCAATGGACTCCTGAGGATTCAGATAATTCGGGTATTGAAAATAAGCTATTAAGTTTACGAGATACTGGGGGAAGTGTTGATAGAGAAGCTTCCAGTGATTCACAATCATCTGAGCAGAGAGAACTGGGGGATTCTGGACAGCAAAGGTCATCAATGTGGCAAGTGCAGGAGCCATTATCTCTGGATGGGCTGAGAGGCGGGATTCCTAAAAAGAATTCAGCTCAGTCAGGAGGATATGGTGCCACTCTTACTGCCCTGTCAGGTGGTAACTCTTCTGTGGATCAAATGGGAGGTCGACCACAAATTACATCGTCGAATATTGGAGCTTCAGGACATGAATTTCTGAACAAGGGAGGTTCAGGGTCCATTGGGACTGTAGGCCAGCAAATATTTCCATCACGAAATGTTGCATTCGCATCTGGACAGCCACCCTTGCATCAACGTCCCCCTTCACCATTGTCAGTGGATCATATTCCTCATCAAATGCCCAACCATAAAACTTCTTCATTTTCTAATCTTGACCCACGTAAAAGGCATTTACAGGATGCTTCCCTTGGTCGGCATCCCAACGTTCAGTCAGATAACCTTAAAAAACCACAGCCTCAGGACCGTCAAGCTGCAGCCTCCCCCATACCTACTTCTCAACCCAGGCAGCCGTTCTCTTTATCTGAGTCACTAAAACCTGATGTTAGGCAGTCCGAACTTTCAAGACAGCATGCAGTATCTATTCCAGGCACTGATTTTGGACCTCCTTCATCAGCTGGGACAGTTCCAGTTCGTTTACCTGCAGAAATTTTGGGAGAGACAAGCACTAGTAGTTTGTTGGCTGCTGTAATGAAGAGTGGAATTTTTTCCAACCATTCAATAGCCAGTAGCATGCAGCAGAATATCAGCTTCCAAGATGCAGGAAATATGCAACCCCATTCAAACGTCAAACCTCAACTACCAAGCCAGTCTTCTCCTGCCCATACTCAGACGACATTCTCAGAGCCAAAGACTGCGGGAGAATCTTCATTAGGTCCTCTTGAAAGCCCGTCAGCTCTGGTTAAGCTATCTCAAACTAAGGTAGAAGATACTCCGTTGCCATCTGATCCACCTTCACCCTCATCTCCTATGAATAGTGCATCCACGGAAACTTCAAATGTGGTAAACGACTCTTCTACCCCAATTTCTAACCTTTTGAGCTCATTGGTTGCAAAGGGCCTTATATCTGCTTCAAAAGGAGAGTTAACAAATAGTGCGACTTCCCAAATGACTGCGCAGCCTGAAAATTTGAAGTTAGGTGATGCTGTGACATGTTCTGTACCAGTTCCTTCCATCCCCGTTACTTCTTCCAGTCAATCATCTACGATACTTGAATCATCTTCAAAAGCTGCTGCTAAGAGCTCCACTAGTCCACCTCCATATGCCACAACTGAGATAACCAACCTCATAGGCTTTGAATTTAGTTCACATGTTATTCGAAAATTTCAGCCATCTGTGATCAGTGGACTCTTTGACGATATTCCATATCAATGTAAGATCTGTGGTCTGAGACTGAAACTTGAAGAACAGTTGGATACACACTTGCAGTGGCACACGTTAAGAACTGAGGCAAACAATTCAAATAGGGCACCAAGAAGATGGTATCCAAGTTCAGATGATTGGATTTCTGGAAATGATATACTCTTACATGATGCTGCCACTTCTCCGGACAGGTGTGACATGATGGAAGAAGTTAATGAGCCAATGGTACCTGCAGATGAAGATCATTTGGTCTGTGTTTTATGTGGTGAACTTTTTGAAGATTTTTATAGTCATGACTTGGATAAGTGGATGTTCAAAGGAGCAATGTATATCACCATCCCATCAGCGGTTAGTGAGAGAGGAAGCACAATTGAACAAGTTGCTAGAGGACCCATCGTTCACACAAAATGTATAACTGAAAGTTCACTACATGACTTGGGACTGGCAACTGATATTAAGATGAATCAAGTGTTTTGTTCCCCGTTTGAGATCGCACTTGCCATTCAATCAATGGAACACCTGAATCATAATCGTTTTCTTCTTTTAGTTCTCCATTGA

Protein sequence

MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRDSGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQRLQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQEKNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIASSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQVQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFLNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSELSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTKVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSATSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNSNRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIKMNQVFCSPFEIALAIQSMEHLNHNRFLLLVLH

Homology

[Close]

BLAST of CmoCh06G004460 vs. ExPASy Swiss-Prot
Match: Q0WPF2 (Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana OX=3702 GN=PCFS4 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-55
Identity = 266/1023 (26.00%), Postives = 390/1023 (38.12%), Query Frame = 0


Query: 65   DSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVCAN 124
            D   GG +  P    E+V  Y   L ELTFNSKPIIT+LTIIAGE  +  + I+  +C  
Sbjct: 49   DEFGGGEEVLPPSMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTR 108

Query: 125  ILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGT 184
            ILE   EQKLPSLYLLDSIVKNIGRDY +YF+++LPEVFC AYRQ    +H SMRHLFGT
Sbjct: 109  ILEAPVEQKLPSLYLLDSIVKNIGRDYGRYFSSRLPEVFCLAYRQAHPSLHPSMRHLFGT 168

Query: 185  WKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIER-QRLQQ 244
            W  VFPP  L+ I+ +L  ++++ + S   +S+P     +P   IHVNPKY+ R +    
Sbjct: 169  WSSVFPPPVLRKIDMQLQ-LSSAANQSSVGASEP----SQPTRGIHVNPKYLRRLEPSAA 228

Query: 245  SGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQEKNI 304
               ++G+ S A +   N          S G          +D +  L    +  +     
Sbjct: 229  ENNLRGINSSARVYGQN----------SLG--------GYNDFEDQLESPSSLSSTPDGF 288

Query: 305  TAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYP 364
            T    D    S+ +   G+GR    +     W     NL +    +R    I    + Y 
Sbjct: 289  TRRSNDGANPSNQAFNYGMGRATSRDDEHMEWRRK-ENLGQGNDHERPRALI----DAYG 348

Query: 365  APRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSML----TGHGASAIA 424
               S +      P ++ +   S   + T W+N+EEEEF W +M+  L     G    +  
Sbjct: 349  VDTSKHVTIN-KPIRDMNGMHSK--MVTPWQNTEEEEFDWEDMSPTLDRSRAGEFLRSSV 408

Query: 425  SSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ 484
             ++G  +  P                  G + D    SD ++    +L            
Sbjct: 409  PALGSVRARPR----------------VGNTSDFHLDSDIKNGVSHQL------------ 468

Query: 485  VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRP-QITSSNIG--ASG 544
                           ++N + S  Y  T       ++ VD   G+  ++ +S++G  +S 
Sbjct: 469  ---------------RENWSLSQNYPHT-------SNRVDTRAGKDLKVLASSVGLVSSN 528

Query: 545  HEFLNKGGSGSIGTVGQQIFPSRNVAFASGQ-PPLHQRPPSPLSVDHIPHQMPNHKTSSF 604
             EF    G+    ++ Q +      A   G  P L  R P+ L V   P    +H  +  
Sbjct: 529  SEF----GAPPFDSI-QDVNSRFGRALPDGTWPHLSARGPNSLPV---PSAHLHHLANPG 588

Query: 605  SNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDV 664
            + +  R   LQ   L R  N  S +      Q  Q   + +P+S    P           
Sbjct: 589  NAMSNR---LQGKPLYRPENQVSQSHLNDMTQQNQMLVNYLPSSSAMAP----------- 648

Query: 665  RQSELSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIA 724
                                                                        
Sbjct: 649  ------------------------------------------------------------ 708

Query: 725  SSMQQNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVK 784
              MQ  ++    G     S ++P L  Q                G  ++ PL S      
Sbjct: 709  RPMQSLLTHVSHGYPPHGSTIRPSLSIQ----------------GGEAMHPLSSG----V 768

Query: 785  LSQTKVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGEL 844
            LSQ    + P                              S L+ SL+A+GLIS     L
Sbjct: 769  LSQIGASNQP-------------------------PGGAFSGLIGSLMAQGLIS-----L 797

Query: 845  TNSATSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYA 904
             N    Q                                                     
Sbjct: 829  NNQPAGQ----------------------------------------------------- 797

Query: 905  TTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTL-- 964
                   +G EF + +++    S IS L+ D+P QC  CGLR K +E+   H+ WH    
Sbjct: 889  -----GPLGLEFDADMLKIRNESAISALYGDLPRQCTTCGLRFKCQEEHSKHMDWHVTKN 797

Query: 965  RTEANNSNRAPRRWYPSSDDWISGNDILLHDAATS--PDRCDMMEEVNEPM-VPADEDHL 1024
            R   N+     R+W+ S+  W+SG + L  +A     P      ++ +E M VPADED  
Sbjct: 949  RMSKNHKQNPSRKWFVSASMWLSGAEALGAEAVPGFLPTEPTTEKKDDEDMAVPADEDQT 797

Query: 1025 VCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSL 1074
             C LCGE FEDFYS + ++WM+KGA+Y+  P    E  + +++   GPIVH KC  ES+ 
Sbjct: 1009 SCALCGEPFEDFYSDETEEWMYKGAVYMNAP---EESTTDMDKSQLGPIVHAKCRPESNG 797

[Close]

BLAST of CmoCh06G004460 vs. ExPASy Swiss-Prot
Match: O94913 (Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 SV=3)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-19
Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 0


Query: 79  QELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVCANILEVSSEQKLPSLY 138
           ++    Y+++L +LTFNSKP I  LTI+A ENL  AK I + + A   +  S +KLP +Y
Sbjct: 16  EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAKAPSSEKLPVMY 75

Query: 139 LLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTWKGVFPPQTLQVIE 198
           L+DSIVKN+GR+Y+  F   L   F   + +VD     S+  L  TW  +FP + L  ++
Sbjct: 76  LMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDEIFPLKKLYALD 135

Query: 199 KELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQRLQQSGRVKGMTSDATIAT 258
             +    NS   +  I   P         SIHVNPK++ +   ++      + S  +I+T
Sbjct: 136 VRV----NSLDPAWPIKPLP---PNVNTSSIHVNPKFLNKSP-EEPSTPGTVVSSPSIST 194

Query: 259 TNVTQDV 266
             +  D+
Sbjct: 196 PPIVPDI 194

[Close]

BLAST of CmoCh06G004460 vs. ExPASy Swiss-Prot
Match: Q9C710 (Polyadenylation and cleavage factor homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PCFS1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-18
Identity = 57/170 (33.53%), Postives = 77/170 (45.29%), Query Frame = 0


Query: 918  SVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLR-------TEANNSNRAPRRWYPS 977
            SVI  L+ D+P QC  CGLR K +E+   H+ WH  +       T      +  R W  S
Sbjct: 243  SVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWLAS 302

Query: 978  SDDWISGNDILLHDAATSPDRCDMM-------------EEVNEPMVPADEDHLVCVLCGE 1037
            +  W+         AAT  +  ++              EE  + MVPADED   C LC E
Sbjct: 303  ASLWLC--------AATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVE 362

Query: 1038 LFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITE 1068
             FE+F+SH+ D WM+K A+Y+T                 G IVH KC+ E
Sbjct: 363  PFEEFFSHEDDDWMYKDAVYLT---------------KNGRIVHVKCMPE 389

[Close]

BLAST of CmoCh06G004460 vs. ExPASy Swiss-Prot
Match: Q9FIX8 (Polyadenylation and cleavage factor homolog 5 OS=Arabidopsis thaliana OX=3702 GN=PCFS5 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-17
Identity = 51/163 (31.29%), Postives = 74/163 (45.40%), Query Frame = 0


Query: 918  SVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLR-------TEANNSNRAPRRWYPS 977
            SVI  L+ D+P QC  CG+R K +E+   H+ WH  +       T      +  R W  S
Sbjct: 236  SVIKSLYSDMPRQCTSCGVRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWLAS 295

Query: 978  SDDWISGN------DILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFEDFYS 1037
            +  W+         ++          + +  +   + MVPADED   C LC E FE+F+S
Sbjct: 296  ASLWLCAPTGGGTVEVASFGGGEMQKKNEKDQVQKQHMVPADEDQKNCALCVEPFEEFFS 355

Query: 1038 HDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITE 1068
            H+ D WM+K A+Y+T                 G IVH KC+ E
Sbjct: 356  HEADDWMYKDAVYLT---------------KNGRIVHVKCMPE 383

[Close]

BLAST of CmoCh06G004460 vs. ExPASy Swiss-Prot
Match: P39081 (Protein PCF11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PCF11 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-13
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 81  LVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVCANILEVSSEQKLPSLYLL 140
           +V  + + L ELTFNS+PIIT LT +A EN+  A+     + + I +   +QKL + Y L
Sbjct: 8   IVKDFNSILEELTFNSRPIITTLTKLAEENISCAQYFVDAIESRIEKCMPKQKLYAFYAL 67

Query: 141 DSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTW 186
           DSI KN+G  Y  YF+  L  ++ + Y  VD+   T + ++F  W
Sbjct: 68  DSICKNVGSPYTIYFSRNLFNLYKRTYLLVDNTTRTKLINMFKLW 112

[Close]

BLAST of CmoCh06G004460 vs. ExPASy TrEMBL
Match: A0A6J1FCJ8 (uncharacterized protein LOC111442777 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442777 PE=4 SV=1)

HSP 1 Score: 2093.2 bits (5422), Expect = 0.0e+00
Identity = 1081/1081 (100.00%), Postives = 1081/1081 (100.00%), Query Frame = 0


Query: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60
            MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD
Sbjct: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60

Query: 61   SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120
            SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT
Sbjct: 61   SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120

Query: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180
            VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH
Sbjct: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180

Query: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR 240
            LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR
Sbjct: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR 240

Query: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 300
            LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQE
Sbjct: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 300

Query: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE 360
            KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE
Sbjct: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE 360

Query: 361  NYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIAS 420
            NYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIAS
Sbjct: 361  NYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIAS 420

Query: 421  SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQV 480
            SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQV
Sbjct: 421  SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQV 480

Query: 481  QEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFL 540
            QEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFL
Sbjct: 481  QEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFL 540

Query: 541  NKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDP 600
            NKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDP
Sbjct: 541  NKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDP 600

Query: 601  RKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSEL 660
            RKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSEL
Sbjct: 601  RKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSEL 660

Query: 661  SRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQ 720
            SRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQ
Sbjct: 661  SRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQ 720

Query: 721  NISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTK 780
            NISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTK
Sbjct: 721  NISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTK 780

Query: 781  VEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSAT 840
            VEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSAT
Sbjct: 781  VEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSAT 840

Query: 841  SQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEIT 900
            SQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEIT
Sbjct: 841  SQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEIT 900

Query: 901  NLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNS 960
            NLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNS
Sbjct: 901  NLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNS 960

Query: 961  NRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFE 1020
            NRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFE
Sbjct: 961  NRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFE 1020

Query: 1021 DFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIK 1080
            DFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIK
Sbjct: 1021 DFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIK 1080

Query: 1081 M 1082
            M
Sbjct: 1081 M 1081

[Close]

BLAST of CmoCh06G004460 vs. ExPASy TrEMBL
Match: A0A6J1F7E8 (uncharacterized protein LOC111442777 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442777 PE=4 SV=1)

HSP 1 Score: 2083.5 bits (5397), Expect = 0.0e+00
Identity = 1079/1081 (99.81%), Postives = 1079/1081 (99.81%), Query Frame = 0


Query: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60
            MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD
Sbjct: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60

Query: 61   SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120
            SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT
Sbjct: 61   SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120

Query: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180
            VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH
Sbjct: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180

Query: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR 240
            LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR
Sbjct: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR 240

Query: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 300
            LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIK  DIQRPLRDAPNDIAQE
Sbjct: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIK--DIQRPLRDAPNDIAQE 300

Query: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE 360
            KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE
Sbjct: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE 360

Query: 361  NYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIAS 420
            NYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIAS
Sbjct: 361  NYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIAS 420

Query: 421  SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQV 480
            SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQV
Sbjct: 421  SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQV 480

Query: 481  QEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFL 540
            QEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFL
Sbjct: 481  QEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFL 540

Query: 541  NKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDP 600
            NKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDP
Sbjct: 541  NKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDP 600

Query: 601  RKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSEL 660
            RKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSEL
Sbjct: 601  RKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSEL 660

Query: 661  SRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQ 720
            SRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQ
Sbjct: 661  SRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQ 720

Query: 721  NISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTK 780
            NISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTK
Sbjct: 721  NISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTK 780

Query: 781  VEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSAT 840
            VEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSAT
Sbjct: 781  VEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSAT 840

Query: 841  SQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEIT 900
            SQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEIT
Sbjct: 841  SQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEIT 900

Query: 901  NLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNS 960
            NLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNS
Sbjct: 901  NLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNS 960

Query: 961  NRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFE 1020
            NRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFE
Sbjct: 961  NRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFE 1020

Query: 1021 DFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIK 1080
            DFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIK
Sbjct: 1021 DFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIK 1079

Query: 1081 M 1082
            M
Sbjct: 1081 M 1079

[Close]

BLAST of CmoCh06G004460 vs. ExPASy TrEMBL
Match: A0A6J1KTP6 (flocculation protein FLO11-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498579 PE=4 SV=1)

HSP 1 Score: 2041.2 bits (5287), Expect = 0.0e+00
Identity = 1056/1082 (97.60%), Postives = 1067/1082 (98.61%), Query Frame = 0


Query: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60
            MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD
Sbjct: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60

Query: 61   SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120
            SGSSDSGRGGYQ QPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT
Sbjct: 61   SGSSDSGRGGYQLQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120

Query: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180
            VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH
Sbjct: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180

Query: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR 240
            LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPEL SQRPPHSIHVNPKYIERQR
Sbjct: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELQSQRPPHSIHVNPKYIERQR 240

Query: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 300
            LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPND+AQE
Sbjct: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDMAQE 300

Query: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE 360
            KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEK+SGQRNGFNIKLGY+
Sbjct: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKVSGQRNGFNIKLGYD 360

Query: 361  NYPAPRSANTGARLLPTQNF-SSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIA 420
            NYPAPRSANTGARLLPTQNF SSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIA
Sbjct: 361  NYPAPRSANTGARLLPTQNFSSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIA 420

Query: 421  SSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ 480
            +SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ
Sbjct: 421  NSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ 480

Query: 481  VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEF 540
            VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGR QITSSNIGASGHEF
Sbjct: 481  VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRSQITSSNIGASGHEF 540

Query: 541  LNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLD 600
            LNKGGSGSIGT GQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLD
Sbjct: 541  LNKGGSGSIGTAGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLD 600

Query: 601  PRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSE 660
            PRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAAS IPTSQPRQPFSLSESLKPDVRQSE
Sbjct: 601  PRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASSIPTSQPRQPFSLSESLKPDVRQSE 660

Query: 661  LSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQ 720
            LSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQ
Sbjct: 661  LSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQ 720

Query: 721  QNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQT 780
            QNISFQDAGNMQPHSNVKP LPS+SSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQT
Sbjct: 721  QNISFQDAGNMQPHSNVKPPLPSRSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQT 780

Query: 781  KVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSA 840
            KVEDTPLPSDPP PSSPMNSAST TSNVVNDSSTPISNLLSSLVAKGLISASKGE+TNS 
Sbjct: 781  KVEDTPLPSDPPPPSSPMNSASTATSNVVNDSSTPISNLLSSLVAKGLISASKGEITNST 840

Query: 841  TSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEI 900
            TSQM AQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESS+KAAAKSSTSPPP+ATTEI
Sbjct: 841  TSQMPAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSTKAAAKSSTSPPPFATTEI 900

Query: 901  TNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANN 960
            TN+IGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANN
Sbjct: 901  TNIIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANN 960

Query: 961  SNRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELF 1020
            SN+ PRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELF
Sbjct: 961  SNKTPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELF 1020

Query: 1021 EDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDI 1080
            EDFYSHDLDKWMFKGAMYITIPSAVSE GST EQVARGPIVH KCITES+LHDLGLATDI
Sbjct: 1021 EDFYSHDLDKWMFKGAMYITIPSAVSEIGSTNEQVARGPIVHPKCITESALHDLGLATDI 1080

Query: 1081 KM 1082
            KM
Sbjct: 1081 KM 1082

[Close]

BLAST of CmoCh06G004460 vs. ExPASy TrEMBL
Match: A0A6J1KZU2 (flocculation protein FLO11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498579 PE=4 SV=1)

HSP 1 Score: 2031.5 bits (5262), Expect = 0.0e+00
Identity = 1054/1082 (97.41%), Postives = 1065/1082 (98.43%), Query Frame = 0


Query: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60
            MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD
Sbjct: 1    MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRD 60

Query: 61   SGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120
            SGSSDSGRGGYQ QPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT
Sbjct: 61   SGSSDSGRGGYQLQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISAT 120

Query: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180
            VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH
Sbjct: 121  VCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRH 180

Query: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQR 240
            LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPEL SQRPPHSIHVNPKYIERQR
Sbjct: 181  LFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELQSQRPPHSIHVNPKYIERQR 240

Query: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 300
            LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIK  DIQRPLRDAPND+AQE
Sbjct: 241  LQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIK--DIQRPLRDAPNDMAQE 300

Query: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYE 360
            KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEK+SGQRNGFNIKLGY+
Sbjct: 301  KNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKVSGQRNGFNIKLGYD 360

Query: 361  NYPAPRSANTGARLLPTQNF-SSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIA 420
            NYPAPRSANTGARLLPTQNF SSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIA
Sbjct: 361  NYPAPRSANTGARLLPTQNFSSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIA 420

Query: 421  SSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ 480
            +SIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ
Sbjct: 421  NSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ 480

Query: 481  VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEF 540
            VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGR QITSSNIGASGHEF
Sbjct: 481  VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRSQITSSNIGASGHEF 540

Query: 541  LNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLD 600
            LNKGGSGSIGT GQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLD
Sbjct: 541  LNKGGSGSIGTAGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLD 600

Query: 601  PRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSE 660
            PRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAAS IPTSQPRQPFSLSESLKPDVRQSE
Sbjct: 601  PRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASSIPTSQPRQPFSLSESLKPDVRQSE 660

Query: 661  LSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQ 720
            LSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQ
Sbjct: 661  LSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQ 720

Query: 721  QNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQT 780
            QNISFQDAGNMQPHSNVKP LPS+SSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQT
Sbjct: 721  QNISFQDAGNMQPHSNVKPPLPSRSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQT 780

Query: 781  KVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSA 840
            KVEDTPLPSDPP PSSPMNSAST TSNVVNDSSTPISNLLSSLVAKGLISASKGE+TNS 
Sbjct: 781  KVEDTPLPSDPPPPSSPMNSASTATSNVVNDSSTPISNLLSSLVAKGLISASKGEITNST 840

Query: 841  TSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEI 900
            TSQM AQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESS+KAAAKSSTSPPP+ATTEI
Sbjct: 841  TSQMPAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSTKAAAKSSTSPPPFATTEI 900

Query: 901  TNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANN 960
            TN+IGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANN
Sbjct: 901  TNIIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANN 960

Query: 961  SNRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELF 1020
            SN+ PRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELF
Sbjct: 961  SNKTPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELF 1020

Query: 1021 EDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDI 1080
            EDFYSHDLDKWMFKGAMYITIPSAVSE GST EQVARGPIVH KCITES+LHDLGLATDI
Sbjct: 1021 EDFYSHDLDKWMFKGAMYITIPSAVSEIGSTNEQVARGPIVHPKCITESALHDLGLATDI 1080

Query: 1081 KM 1082
            KM
Sbjct: 1081 KM 1080

[Close]

BLAST of CmoCh06G004460 vs. ExPASy TrEMBL
Match: A0A6J1F6I7 (uncharacterized protein LOC111442777 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111442777 PE=4 SV=1)

HSP 1 Score: 1850.9 bits (4793), Expect = 0.0e+00
Identity = 954/955 (99.90%), Postives = 955/955 (100.00%), Query Frame = 0


Query: 127  EVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTWK 186
            +VSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTWK
Sbjct: 27   KVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTWK 86

Query: 187  GVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQRLQQSGR 246
            GVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQRLQQSGR
Sbjct: 87   GVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIERQRLQQSGR 146

Query: 247  VKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQEKNITAA 306
            VKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQEKNITAA
Sbjct: 147  VKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQEKNITAA 206

Query: 307  YADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYPAPR 366
            YADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYPAPR
Sbjct: 207  YADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYPAPR 266

Query: 367  SANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIASSIGKDQ 426
            SANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIASSIGKDQ
Sbjct: 267  SANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHGASAIASSIGKDQ 326

Query: 427  WTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQVQEPLSL 486
            WTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQVQEPLSL
Sbjct: 327  WTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQVQEPLSL 386

Query: 487  DGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFLNKGGSG 546
            DGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFLNKGGSG
Sbjct: 387  DGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITSSNIGASGHEFLNKGGSG 446

Query: 547  SIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDPRKRHLQ 606
            SIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDPRKRHLQ
Sbjct: 447  SIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDPRKRHLQ 506

Query: 607  DASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSELSRQHAV 666
            DASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSELSRQHAV
Sbjct: 507  DASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDVRQSELSRQHAV 566

Query: 667  SIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQNISFQD 726
            SIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQNISFQD
Sbjct: 567  SIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQNISFQD 626

Query: 727  AGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTKVEDTPL 786
            AGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTKVEDTPL
Sbjct: 627  AGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTKVEDTPL 686

Query: 787  PSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSATSQMTAQ 846
            PSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSATSQMTAQ
Sbjct: 687  PSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSATSQMTAQ 746

Query: 847  PENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEITNLIGFE 906
            PENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEITNLIGFE
Sbjct: 747  PENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYATTEITNLIGFE 806

Query: 907  FSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNSNRAPRR 966
            FSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNSNRAPRR
Sbjct: 807  FSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNSNRAPRR 866

Query: 967  WYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFEDFYSHD 1026
            WYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFEDFYSHD
Sbjct: 867  WYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFEDFYSHD 926

Query: 1027 LDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIKM 1082
            LDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIKM
Sbjct: 927  LDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSLHDLGLATDIKM 981

[Close]

BLAST of CmoCh06G004460 vs. TAIR 10
Match: AT2G36480.1 (ENTH/VHS family protein )

HSP 1 Score: 413.7 bits (1062), Expect = 4.7e-115
Identity = 345/983 (35.10%), Postives = 488/983 (49.64%), Query Frame = 0


Query: 126  LEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTW 185
            ++V S+QKLP+LYLLDSIVKNIGRDYIKYF A+LPEVF KAYRQVD P+H++MRHLFGTW
Sbjct: 1    MQVPSDQKLPTLYLLDSIVKNIGRDYIKYFGARLPEVFVKAYRQVDPPMHSNMRHLFGTW 60

Query: 186  KGVFPPQTLQVIEKELGFITNSGSSSGTIS-SKPELHSQRPPHSIHVNPKYIERQRLQQS 245
            KGVF PQTLQ+IEKELGF   S  S+  +S ++ E  SQRPPHSIHVNPKY+ERQRLQQS
Sbjct: 61   KGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRPPHSIHVNPKYLERQRLQQS 120

Query: 246  GRVKGMTSDATIATTNVTQDVAQ----AKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 305
            GR KGM +D      N+T+D  +    + I++G  W   + KV++I+RP RD  ++   E
Sbjct: 121  GRTKGMVTDVPETAPNLTRDSDRLERVSSIASGGSWVGPA-KVNNIRRPQRDLLSEPLYE 180

Query: 306  KNITAAYADYEYGSDL-----SRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNI 365
            K+I +   +Y+Y SDL     S    +G R  D+G +K W    +   + +S QR+G + 
Sbjct: 181  KDIESIAGEYDYASDLPHNSRSVIKNVGSRITDDGCEKQWYGATNRDPDLISDQRDGLHS 240

Query: 366  KLGYENYPAPRSANTGARLLPTQNFSSSSSNRGLST---NWKNSEEEEFMWGEMNSMLTG 425
            K    NY   R           +N  SS  +R +     +WKNSEEEEFMW +M+S L+ 
Sbjct: 241  KSRTSNYATAR----------VENLESSGPSRNIGVPYDSWKNSEEEEFMW-DMHSRLSE 300

Query: 426  HGASAIASSIGKDQWTPEDSDNSGIENKLLS---LRDTGGSVDREASSDSQSSEQRELGD 485
               + I      +   P++S+    EN LL            D   S++S SSEQ++   
Sbjct: 301  TDVATINPK--NELHAPDESERLESENHLLKRPRFSALDPRFDPANSTNSYSSEQKDPSS 360

Query: 486  SGQQRSSMWQVQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITS 545
             G    S                             AT TA   G      +  +P++ S
Sbjct: 361  IGHWAFS--------------------------STNATSTATRKG------IQPQPRVAS 420

Query: 546  SNIGASGHEFLNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPN 605
            S I       L   GSGS                   Q PLH                 +
Sbjct: 421  SGI-------LPSSGSGS-----------------DRQSPLHD----------------S 480

Query: 606  HKTSSFSNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSE 665
                + +  D R+ H                   PQ +D +A+  P   + PR      +
Sbjct: 481  TSKQNVTKQDVRRAH-----------------SLPQ-RDPRASRFPAKQNVPR-----DD 540

Query: 666  SLKPDVRQSELSRQHAVSIPGTDFGPPSSAGTVP-VRLPAEILGETSTSSLLAAVMKSGI 725
            S++     S+    +   +P   F   S+A   P + L +E  G+ + S LL AVMKSGI
Sbjct: 541  SVRLPSSSSQFKNTNMRELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEAVMKSGI 600

Query: 726  FSNHSIASSMQQNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLE 785
             SN+S   ++++          + H  V P        A T    S+PKT   S    L 
Sbjct: 601  LSNNSTCGAIKE----------ESHDEVNP-------GALTLPAASKPKTLPIS----LA 660

Query: 786  SPSALVKLSQTKVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLI 845
            + + L +L   KVE +  P      +S     S +TS   + +S P+S LLSSLV+KGLI
Sbjct: 661  TDNLLARL---KVEQSSAPL-VSCAASLTGITSVQTSKEKSKASDPLSCLLSSLVSKGLI 720

Query: 846  SASKGELTNSATSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKA-AAKS 905
            SASK EL ++ +      P++     +   S+ V  +P  + +Q S +++  S A   K 
Sbjct: 721  SASKTELPSAPSITQEHSPDH-----STNSSMSVSVVP--ADAQPSVLVKGPSTAPKVKG 780

Query: 906  STSPPPYATTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTH 965
              +P   + +E  +LIG +F +  IR+  PSVIS LFDD+P+ C  C +RLK +E+LD H
Sbjct: 781  LAAPSETSKSEPKDLIGLKFRADKIRELHPSVISSLFDDLPHLCTSCSVRLKQKEELDRH 829

Query: 966  LQWH-TLRTEANNSNRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPM---- 1025
            ++ H   + E + +N   R W+P  D+WI+            P+  +++ E    +    
Sbjct: 841  MELHDKKKLELSGTNSKCRVWFPKVDNWIAAK-----AGELEPEYEEVLSEPESAIEDCQ 829

Query: 1026 -VPADEDHLVCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVH 1085
             V ADE    C+LCGE+FED++S ++ +WMFKGA Y+T P A SE        A GPIVH
Sbjct: 901  AVAADETQCACILCGEVFEDYFSQEMAQWMFKGASYLTNPPANSE--------ASGPIVH 829

[Close]

BLAST of CmoCh06G004460 vs. TAIR 10
Match: AT2G36480.3 (ENTH/VHS family protein )

HSP 1 Score: 413.7 bits (1062), Expect = 4.7e-115
Identity = 345/983 (35.10%), Postives = 488/983 (49.64%), Query Frame = 0


Query: 126  LEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTW 185
            ++V S+QKLP+LYLLDSIVKNIGRDYIKYF A+LPEVF KAYRQVD P+H++MRHLFGTW
Sbjct: 1    MQVPSDQKLPTLYLLDSIVKNIGRDYIKYFGARLPEVFVKAYRQVDPPMHSNMRHLFGTW 60

Query: 186  KGVFPPQTLQVIEKELGFITNSGSSSGTIS-SKPELHSQRPPHSIHVNPKYIERQRLQQS 245
            KGVF PQTLQ+IEKELGF   S  S+  +S ++ E  SQRPPHSIHVNPKY+ERQRLQQS
Sbjct: 61   KGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRPPHSIHVNPKYLERQRLQQS 120

Query: 246  GRVKGMTSDATIATTNVTQDVAQ----AKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 305
            GR KGM +D      N+T+D  +    + I++G  W   + KV++I+RP RD  ++   E
Sbjct: 121  GRTKGMVTDVPETAPNLTRDSDRLERVSSIASGGSWVGPA-KVNNIRRPQRDLLSEPLYE 180

Query: 306  KNITAAYADYEYGSDL-----SRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNI 365
            K+I +   +Y+Y SDL     S    +G R  D+G +K W    +   + +S QR+G + 
Sbjct: 181  KDIESIAGEYDYASDLPHNSRSVIKNVGSRITDDGCEKQWYGATNRDPDLISDQRDGLHS 240

Query: 366  KLGYENYPAPRSANTGARLLPTQNFSSSSSNRGLST---NWKNSEEEEFMWGEMNSMLTG 425
            K    NY   R           +N  SS  +R +     +WKNSEEEEFMW +M+S L+ 
Sbjct: 241  KSRTSNYATAR----------VENLESSGPSRNIGVPYDSWKNSEEEEFMW-DMHSRLSE 300

Query: 426  HGASAIASSIGKDQWTPEDSDNSGIENKLLS---LRDTGGSVDREASSDSQSSEQRELGD 485
               + I      +   P++S+    EN LL            D   S++S SSEQ++   
Sbjct: 301  TDVATINPK--NELHAPDESERLESENHLLKRPRFSALDPRFDPANSTNSYSSEQKDPSS 360

Query: 486  SGQQRSSMWQVQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITS 545
             G    S                             AT TA   G      +  +P++ S
Sbjct: 361  IGHWAFS--------------------------STNATSTATRKG------IQPQPRVAS 420

Query: 546  SNIGASGHEFLNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPN 605
            S I       L   GSGS                   Q PLH                 +
Sbjct: 421  SGI-------LPSSGSGS-----------------DRQSPLHD----------------S 480

Query: 606  HKTSSFSNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSE 665
                + +  D R+ H                   PQ +D +A+  P   + PR      +
Sbjct: 481  TSKQNVTKQDVRRAH-----------------SLPQ-RDPRASRFPAKQNVPR-----DD 540

Query: 666  SLKPDVRQSELSRQHAVSIPGTDFGPPSSAGTVP-VRLPAEILGETSTSSLLAAVMKSGI 725
            S++     S+    +   +P   F   S+A   P + L +E  G+ + S LL AVMKSGI
Sbjct: 541  SVRLPSSSSQFKNTNMRELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEAVMKSGI 600

Query: 726  FSNHSIASSMQQNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLE 785
             SN+S   ++++          + H  V P        A T    S+PKT   S    L 
Sbjct: 601  LSNNSTCGAIKE----------ESHDEVNP-------GALTLPAASKPKTLPIS----LA 660

Query: 786  SPSALVKLSQTKVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLI 845
            + + L +L   KVE +  P      +S     S +TS   + +S P+S LLSSLV+KGLI
Sbjct: 661  TDNLLARL---KVEQSSAPL-VSCAASLTGITSVQTSKEKSKASDPLSCLLSSLVSKGLI 720

Query: 846  SASKGELTNSATSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKA-AAKS 905
            SASK EL ++ +      P++     +   S+ V  +P  + +Q S +++  S A   K 
Sbjct: 721  SASKTELPSAPSITQEHSPDH-----STNSSMSVSVVP--ADAQPSVLVKGPSTAPKVKG 780

Query: 906  STSPPPYATTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTH 965
              +P   + +E  +LIG +F +  IR+  PSVIS LFDD+P+ C  C +RLK +E+LD H
Sbjct: 781  LAAPSETSKSEPKDLIGLKFRADKIRELHPSVISSLFDDLPHLCTSCSVRLKQKEELDRH 829

Query: 966  LQWH-TLRTEANNSNRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPM---- 1025
            ++ H   + E + +N   R W+P  D+WI+            P+  +++ E    +    
Sbjct: 841  MELHDKKKLELSGTNSKCRVWFPKVDNWIAAK-----AGELEPEYEEVLSEPESAIEDCQ 829

Query: 1026 -VPADEDHLVCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVH 1085
             V ADE    C+LCGE+FED++S ++ +WMFKGA Y+T P A SE        A GPIVH
Sbjct: 901  AVAADETQCACILCGEVFEDYFSQEMAQWMFKGASYLTNPPANSE--------ASGPIVH 829

[Close]

BLAST of CmoCh06G004460 vs. TAIR 10
Match: AT2G36480.2 (ENTH/VHS family protein )

HSP 1 Score: 413.3 bits (1061), Expect = 6.2e-115
Identity = 344/979 (35.14%), Postives = 487/979 (49.74%), Query Frame = 0


Query: 126  LEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTW 185
            ++V S+QKLP+LYLLDSIVKNIGRDYIKYF A+LPEVF KAYRQVD P+H++MRHLFGTW
Sbjct: 1    MQVPSDQKLPTLYLLDSIVKNIGRDYIKYFGARLPEVFVKAYRQVDPPMHSNMRHLFGTW 60

Query: 186  KGVFPPQTLQVIEKELGFITNSGSSSGTIS-SKPELHSQRPPHSIHVNPKYIERQRLQQS 245
            KGVF PQTLQ+IEKELGF   S  S+  +S ++ E  SQRPPHSIHVNPKY+ERQRLQQS
Sbjct: 61   KGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRPPHSIHVNPKYLERQRLQQS 120

Query: 246  GRVKGMTSDATIATTNVTQDVAQ----AKISTGRPWADASIKVHDIQRPLRDAPNDIAQE 305
            GR KGM +D      N+T+D  +    + I++G  W   + KV++I+RP RD  ++   E
Sbjct: 121  GRTKGMVTDVPETAPNLTRDSDRLERVSSIASGGSWVGPA-KVNNIRRPQRDLLSEPLYE 180

Query: 306  KNITAAYADYEYGSDL-----SRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNI 365
            K+I +   +Y+Y SDL     S    +G R  D+G +K W    +   + +S QR+G + 
Sbjct: 181  KDIESIAGEYDYASDLPHNSRSVIKNVGSRITDDGCEKQWYGATNRDPDLISDQRDGLHS 240

Query: 366  KLGYENYPAPRSANTGARLLPTQNFSSSSSNRGLST---NWKNSEEEEFMWGEMNSMLTG 425
            K    NY   R           +N  SS  +R +     +WKNSEEEEFMW +M+S L+ 
Sbjct: 241  KSRTSNYATAR----------VENLESSGPSRNIGVPYDSWKNSEEEEFMW-DMHSRLSE 300

Query: 426  HGASAIASSIGKDQWTPEDSDNSGIENKLLS---LRDTGGSVDREASSDSQSSEQRELGD 485
               + I      +   P++S+    EN LL            D   S++S SSEQ++   
Sbjct: 301  TDVATINPK--NELHAPDESERLESENHLLKRPRFSALDPRFDPANSTNSYSSEQKDPSS 360

Query: 486  SGQQRSSMWQVQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRPQITS 545
             G    S                             AT TA   G      +  +P++ S
Sbjct: 361  IGHWAFS--------------------------STNATSTATRKG------IQPQPRVAS 420

Query: 546  SNIGASGHEFLNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPN 605
            S I       L   GSGS                   Q PLH                 +
Sbjct: 421  SGI-------LPSSGSGS-----------------DRQSPLHD----------------S 480

Query: 606  HKTSSFSNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSE 665
                + +  D R+ H                   PQ +D +A+  P   + PR      +
Sbjct: 481  TSKQNVTKQDVRRAH-----------------SLPQ-RDPRASRFPAKQNVPR-----DD 540

Query: 666  SLKPDVRQSELSRQHAVSIPGTDFGPPSSAGTVP-VRLPAEILGETSTSSLLAAVMKSGI 725
            S++     S+    +   +P   F   S+A   P + L +E  G+ + S LL AVMKSGI
Sbjct: 541  SVRLPSSSSQFKNTNMRELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEAVMKSGI 600

Query: 726  FSNHSIASSMQQNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLE 785
             SN+S   ++++          + H  V P        A T    S+PKT   S    L 
Sbjct: 601  LSNNSTCGAIKE----------ESHDEVNP-------GALTLPAASKPKTLPIS----LA 660

Query: 786  SPSALVKLSQTKVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLI 845
            + + L +L   KVE +  P      +S     S +TS   + +S P+S LLSSLV+KGLI
Sbjct: 661  TDNLLARL---KVEQSSAPL-VSCAASLTGITSVQTSKEKSKASDPLSCLLSSLVSKGLI 720

Query: 846  SASKGELTNSATSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKA-AAKS 905
            SASK EL ++ +      P++     +   S+ V  +P  + +Q S +++  S A   K 
Sbjct: 721  SASKTELPSAPSITQEHSPDH-----STNSSMSVSVVP--ADAQPSVLVKGPSTAPKVKG 780

Query: 906  STSPPPYATTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTH 965
              +P   + +E  +LIG +F +  IR+  PSVIS LFDD+P+ C  C +RLK +E+LD H
Sbjct: 781  LAAPSETSKSEPKDLIGLKFRADKIRELHPSVISSLFDDLPHLCTSCSVRLKQKEELDRH 825

Query: 966  LQWH-TLRTEANNSNRAPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPM---- 1025
            ++ H   + E + +N   R W+P  D+WI+            P+  +++ E    +    
Sbjct: 841  MELHDKKKLELSGTNSKCRVWFPKVDNWIAAK-----AGELEPEYEEVLSEPESAIEDCQ 825

Query: 1026 -VPADEDHLVCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVH 1081
             V ADE    C+LCGE+FED++S ++ +WMFKGA Y+T P A SE        A GPIVH
Sbjct: 901  AVAADETQCACILCGEVFEDYFSQEMAQWMFKGASYLTNPPANSE--------ASGPIVH 825

[Close]

BLAST of CmoCh06G004460 vs. TAIR 10
Match: AT4G04885.1 (PCF11P-similar protein 4 )

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-56
Identity = 266/1023 (26.00%), Postives = 390/1023 (38.12%), Query Frame = 0


Query: 65   DSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVCAN 124
            D   GG +  P    E+V  Y   L ELTFNSKPIIT+LTIIAGE  +  + I+  +C  
Sbjct: 49   DEFGGGEEVLPPSMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTR 108

Query: 125  ILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGT 184
            ILE   EQKLPSLYLLDSIVKNIGRDY +YF+++LPEVFC AYRQ    +H SMRHLFGT
Sbjct: 109  ILEAPVEQKLPSLYLLDSIVKNIGRDYGRYFSSRLPEVFCLAYRQAHPSLHPSMRHLFGT 168

Query: 185  WKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELHSQRPPHSIHVNPKYIER-QRLQQ 244
            W  VFPP  L+ I+ +L  ++++ + S   +S+P     +P   IHVNPKY+ R +    
Sbjct: 169  WSSVFPPPVLRKIDMQLQ-LSSAANQSSVGASEP----SQPTRGIHVNPKYLRRLEPSAA 228

Query: 245  SGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDIAQEKNI 304
               ++G+ S A +   N          S G          +D +  L    +  +     
Sbjct: 229  ENNLRGINSSARVYGQN----------SLG--------GYNDFEDQLESPSSLSSTPDGF 288

Query: 305  TAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYP 364
            T    D    S+ +   G+GR    +     W     NL +    +R    I    + Y 
Sbjct: 289  TRRSNDGANPSNQAFNYGMGRATSRDDEHMEWRRK-ENLGQGNDHERPRALI----DAYG 348

Query: 365  APRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSML----TGHGASAIA 424
               S +      P ++ +   S   + T W+N+EEEEF W +M+  L     G    +  
Sbjct: 349  VDTSKHVTIN-KPIRDMNGMHSK--MVTPWQNTEEEEFDWEDMSPTLDRSRAGEFLRSSV 408

Query: 425  SSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQ 484
             ++G  +  P                  G + D    SD ++    +L            
Sbjct: 409  PALGSVRARPR----------------VGNTSDFHLDSDIKNGVSHQL------------ 468

Query: 485  VQEPLSLDGLRGGIPKKNSAQSGGYGATLTALSGGNSSVDQMGGRP-QITSSNIG--ASG 544
                           ++N + S  Y  T       ++ VD   G+  ++ +S++G  +S 
Sbjct: 469  ---------------RENWSLSQNYPHT-------SNRVDTRAGKDLKVLASSVGLVSSN 528

Query: 545  HEFLNKGGSGSIGTVGQQIFPSRNVAFASGQ-PPLHQRPPSPLSVDHIPHQMPNHKTSSF 604
             EF    G+    ++ Q +      A   G  P L  R P+ L V   P    +H  +  
Sbjct: 529  SEF----GAPPFDSI-QDVNSRFGRALPDGTWPHLSARGPNSLPV---PSAHLHHLANPG 588

Query: 605  SNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASPIPTSQPRQPFSLSESLKPDV 664
            + +  R   LQ   L R  N  S +      Q  Q   + +P+S    P           
Sbjct: 589  NAMSNR---LQGKPLYRPENQVSQSHLNDMTQQNQMLVNYLPSSSAMAP----------- 648

Query: 665  RQSELSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIA 724
                                                                        
Sbjct: 649  ------------------------------------------------------------ 708

Query: 725  SSMQQNISFQDAGNMQPHSNVKPQLPSQSSPAHTQTTFSEPKTAGESSLGPLESPSALVK 784
              MQ  ++    G     S ++P L  Q                G  ++ PL S      
Sbjct: 709  RPMQSLLTHVSHGYPPHGSTIRPSLSIQ----------------GGEAMHPLSSG----V 768

Query: 785  LSQTKVEDTPLPSDPPSPSSPMNSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGEL 844
            LSQ    + P                              S L+ SL+A+GLIS     L
Sbjct: 769  LSQIGASNQP-------------------------PGGAFSGLIGSLMAQGLIS-----L 797

Query: 845  TNSATSQMTAQPENLKLGDAVTCSVPVPSIPVTSSSQSSTILESSSKAAAKSSTSPPPYA 904
             N    Q                                                     
Sbjct: 829  NNQPAGQ----------------------------------------------------- 797

Query: 905  TTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTL-- 964
                   +G EF + +++    S IS L+ D+P QC  CGLR K +E+   H+ WH    
Sbjct: 889  -----GPLGLEFDADMLKIRNESAISALYGDLPRQCTTCGLRFKCQEEHSKHMDWHVTKN 797

Query: 965  RTEANNSNRAPRRWYPSSDDWISGNDILLHDAATS--PDRCDMMEEVNEPM-VPADEDHL 1024
            R   N+     R+W+ S+  W+SG + L  +A     P      ++ +E M VPADED  
Sbjct: 949  RMSKNHKQNPSRKWFVSASMWLSGAEALGAEAVPGFLPTEPTTEKKDDEDMAVPADEDQT 797

Query: 1025 VCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSERGSTIEQVARGPIVHTKCITESSL 1074
             C LCGE FEDFYS + ++WM+KGA+Y+  P    E  + +++   GPIVH KC  ES+ 
Sbjct: 1009 SCALCGEPFEDFYSDETEEWMYKGAVYMNAP---EESTTDMDKSQLGPIVHAKCRPESNG 797

[Close]

BLAST of CmoCh06G004460 vs. TAIR 10
Match: AT2G36485.1 (ENTH/VHS family protein )

HSP 1 Score: 134.0 bits (336), Expect = 7.2e-31
Identity = 80/143 (55.94%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 3   MESSRRPFDRTREPG-LKKQRLADEAERGGNINGRPF-PQRPIGSGTNIVQP----RFRA 62
           ME+ RRPFDR+R+PG +KK RL++E+ R  N N R F  QR +G+ T +  P    RFR 
Sbjct: 1   MENPRRPFDRSRDPGPMKKPRLSEESIRPVNSNARQFLSQRTLGTATAVTVPPASSRFRV 60

Query: 63  SDRDSGS---SDSGRGGYQPQPLQ-HQELVSQYRTALAELTFNSKPIITNLTIIAGENLQ 122
           S R++ S   SD  R  YQPQP+  H ELV+QY++ALAELTFNSKPIITNLTIIAGEN+ 
Sbjct: 61  SGRETESSIVSDPSREAYQPQPVHPHYELVNQYKSALAELTFNSKPIITNLTIIAGENVH 120

Query: 123 AAKAISATVCANILEVSSEQKLP 136
           AAKA+   +C NILEV+++   P
Sbjct: 121 AAKAVVTAICNNILEVNTQFSCP 143

The following BLAST results are available for this feature:

BLAST of CmoCh06G004460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WPF2	1.8e-55	26.00	Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O94913	1.6e-19	33.69	Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 ...	[more]
Q9C710	3.1e-18	33.53	Polyadenylation and cleavage factor homolog 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FIX8	1.2e-17	31.29	Polyadenylation and cleavage factor homolog 5 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P39081	6.6e-13	38.10	Protein PCF11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292...	[more]

BLAST of CmoCh06G004460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCJ8	0.0e+00	100.00	uncharacterized protein LOC111442777 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F7E8	0.0e+00	99.81	uncharacterized protein LOC111442777 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTP6	0.0e+00	97.60	flocculation protein FLO11-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1KZU2	0.0e+00	97.41	flocculation protein FLO11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F6I7	0.0e+00	99.90	uncharacterized protein LOC111442777 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh06G004460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36480.1	4.7e-115	35.10	ENTH/VHS family protein	[more]
AT2G36480.3	4.7e-115	35.10	ENTH/VHS family protein	[more]
AT2G36480.2	6.2e-115	35.14	ENTH/VHS family protein	[more]
AT4G04885.1	1.3e-56	26.00	PCF11P-similar protein 4	[more]
AT2G36485.1	7.2e-31	55.94	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 80..202 e-value: 3.1E-44 score: 162.9
IPR006569	CID domain	PFAM	PF04818	CID	coord: 87..195 e-value: 2.8E-13 score: 50.2
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 77..205 score: 36.382732
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 72..202 e-value: 1.9E-42 score: 146.4
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 78..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..477
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 611..665
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..477
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 726..812
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..681
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 726..759
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 795..812
None	No IPR available	PANTHER	PTHR15921:SF14	RNA POLYMERASE II-BINDING DOMAIN PROTEIN	coord: 3..1072
None	No IPR available	CDD	cd16982	CID_Pcf11	coord: 82..194 e-value: 4.66664E-54 score: 182.38
IPR045154	Protein PCF11-like	PANTHER	PTHR15921	PRE-MRNA CLEAVAGE COMPLEX II	coord: 3..1072
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 931..951
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 929..956 score: 9.05759

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G004460.1	CmoCh06G004460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006379	mRNA cleavage
biological_process	GO:0006378	mRNA polyadenylation
biological_process	GO:0006369	termination of RNA polymerase II transcription
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005849	mRNA cleavage factor complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0000993	RNA polymerase II complex binding