CmoCh06G004430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G004430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr06: 2127230 .. 2127865 (-)
RNA-Seq Expression	CmoCh06G004430
Synteny	CmoCh06G004430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTGGGTTTTCAGCCCAAGAGCCTCCGCCAGTCGGAGACGAAGAAAACCCAATGCTCATCATCAATTCAGGATCAGAAGAAACTCCAGCAGCATCGGAATCCGACTGAGCAGAAGAAGAATTCGCCCCAATTGGAGAAACCGAATCGCCCTCTTCTAAGGGATTCATCTACTAAACCCCAAAACACAGTTTCAAAACGAAAAGGGAAAACCCAACAACGAATTCCTGTAATTGGGCAGGTAAATGGAACACAGAAATGGAGCAGAGTATATATAGAGACTTACGCCGACAATGCATTCGATAAAAATCTGGGGAAAGAAATTCAAAGGCGGTGGAGACAGTGACTGTGAATCGAGTCGTAGCTCTACAGTTGAGTCGTTCCTCGTGCAGGGACCCCATTAAGATTGAGCCAAAAAGTTGAGTCTTTGGATTCTCTGCAAATTTAAAGGAAGAAAACGCACAGAAGAAGCCGACCGACCTTCGTTGATCGGATCGTTTTCGCCGAAGCTGCACTATTTCGGAAGGCCGTTATTGTGGTTGTGGGAAAACGGAAACAGGGGGTGATTTCTTCAACGCGGGATTTTAGATCTTTTGTCCGTACGGTTTTTTCTGGACCGGTGGTTTTGGTTTGA

mRNA sequence

ATGGCATTGGGTTTTCAGCCCAAGAGCCTCCGCCAGTCGGAGACGAAGAAAACCCAATGCTCATCATCAATTCAGGATCAGAAGAAACTCCAGCAGCATCGGAATCCGACTGAGCAGAAGAAGAATTCGCCCCAATTGGAGAAACCGAATCGCCCTCTTCTAAGGGATTCATCTACTAAACCCCAAAACACAGTTTCAAAACGAAAAGGGAAAACCCAACAACGAATTCCTGTAAATGGAACACAGAAATGGAGCAGAGTATATATAGAGACTTACGCCGACAATGCATTCGATAAAAATCTGGGGAAAGAAATTCAAAGGCGGTGGAGACAGAAGAAAACGCACAGAAGAAGCCGACCGACCTTCGTTGATCGGATCGTTTTCGCCGAAGCTGCACTATTTCGGAAGGCCGTTATTGTGGTTGTGGGAAAACGGAAACAGGGGGTGATTTCTTCAACGCGGGATTTTAGATCTTTTGTCCGTACGGTTTTTTCTGGACCGGTGGTTTTGGTTTGA

Coding sequence (CDS)

ATGGCATTGGGTTTTCAGCCCAAGAGCCTCCGCCAGTCGGAGACGAAGAAAACCCAATGCTCATCATCAATTCAGGATCAGAAGAAACTCCAGCAGCATCGGAATCCGACTGAGCAGAAGAAGAATTCGCCCCAATTGGAGAAACCGAATCGCCCTCTTCTAAGGGATTCATCTACTAAACCCCAAAACACAGTTTCAAAACGAAAAGGGAAAACCCAACAACGAATTCCTGTAAATGGAACACAGAAATGGAGCAGAGTATATATAGAGACTTACGCCGACAATGCATTCGATAAAAATCTGGGGAAAGAAATTCAAAGGCGGTGGAGACAGAAGAAAACGCACAGAAGAAGCCGACCGACCTTCGTTGATCGGATCGTTTTCGCCGAAGCTGCACTATTTCGGAAGGCCGTTATTGTGGTTGTGGGAAAACGGAAACAGGGGGTGATTTCTTCAACGCGGGATTTTAGATCTTTTGTCCGTACGGTTTTTTCTGGACCGGTGGTTTTGGTTTGA

Protein sequence

MALGFQPKSLRQSETKKTQCSSSIQDQKKLQQHRNPTEQKKNSPQLEKPNRPLLRDSSTKPQNTVSKRKGKTQQRIPVNGTQKWSRVYIETYADNAFDKNLGKEIQRRWRQKKTHRRSRPTFVDRIVFAEAALFRKAVIVVVGKRKQGVISSTRDFRSFVRTVFSGPVVLV

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh06G004430 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G004430 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G004430 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G004430.1	CmoCh06G004430.1	mRNA