CmoCh06G004180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G004180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	vacuolar protein-sorting-associated protein 37 homolog 1-like
Location	Cmo_Chr06: 2003918 .. 2014725 (+)
RNA-Seq Expression	CmoCh06G004180
Synteny	CmoCh06G004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGGCCAAGGCTGAAGAGACGAGGTTAATGTGTTGTGGAAAGCAGGAGCCTATGGACGGTGGAGATGGATTTGGTGGCTGAGGCTTCATTACAGCCGTCAGATCGAATTTGACAGAGATGACAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCGTCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTGATCTTATTCTCCTTTCCTCCTCCCTATTCCCACCAACGGCTCTCATTCCTCCACGTTTCATCTTACCTGCCACGTGTCGTCTTCTCATGGTTTGTTTTATGTCCACATGGAATCATAGACTTTAAAATTCGGTTTGCTTCTCCCACGAGGTTTCGCTTCACCATCGCTTTGGTGATGTCAACTTTTAGCAATAAAATAAATAGGTTTGGTTATTCCTAGCATAGTTTCGGTACATAATAATAATTATTTTTTTGTATTAAAATTTTTTTAAAAAATTAATATGTTCGTGTTGATATATAATATTTGTTACAAATAAGATCTATACGACATACACGAACACACACTTTACAAGCAATGAATCGGTCAAAATATGCGTGAGAGTTAGAATTAATTCTCGTTTATCTACTTTTGTGGAAGAAAGGTGAAGCTATAAACATCTTTTTTTCGTACTTTGTGTATGGAGTACTCTACGATGTAGGGTCTTTGAAAAATTGAACGAGTATTAAAAGTGTACTCAATACCCACGAGCCTTTGAATTTAAGAGAGATTCTCGAGAATGTTCGCTACCGATTTCCTTTTATATTTAAAAAACGAGTAGGAGAGAAAAAAATTGAATTATTTATAATAAATGATTTAATATGGTCATCATCATTGGTAAGTGCTACAAATAAATTAAATTTTATTTATAAGTTTTTTTAATTTAATATAATTAAAATAAAAAGAAATTTAAAAATTATGTTTTTTTTTTTTAATTTCCCCTTTTAACACTAAATTAATTTATTTTTATTTTTTTTATACGATGTGGATAAATTCATAATTAAATTAACCCCACCTAACCCTTTTTTCCCTTTTGTGTTTGTCTTTTGTTTTGTTCATTTCATAAAAGTACAATCAATTTCCAATATCACATTTGTGTTTATATATATATATATATACACACCAAAAAAATAAAATAAAAAAATAATTTTTTTTCCTAATGAATATTCAAAGCATTATAATCTATGATTAGAAGCTGTTCATCAAATTATATCTTCTGAAAGCAATGCCTTTTATAAGCAAGACCCACCAAATTAAAAAATTAAAAAATTAAAAAATTAAAAAAATTATTACTTGTAAAACTCTTACTTACAAGAAATGCCCTAAATTAATATTTAAAATTAAATAATCAACCAATCACGCAATCAATTGACAAAATTAACATATTATTAAGCATATAACACAATTAAATTATTGTTCATTTCATTAATGACATAATGGTCAAATTAAAGCTATAAAATACTTAAAACCTAACTAATCAAATTATTTTAACCCAATTAAAAAAATAATTAAATTTCCGTGTTTCGCAAATGCTCTAACCCACTCGGGACTTAATTATTGTGTAGTTGTTAAGACTATGCATAAAATATGGTAAGTTTTTGAAATTTAGGTCAAATTAAGCTTAAACTATTAATTAAAACACGAATACCTTCGATAAAGTAAAAGGTCTAACCTCTCAGTACTACATTTGTTGAACTCACGTGGTGGTTGAAATGGTATCGAAATAGACGATCGACTTCAGTAATGATGTTATACTAGCTGGGTTTTTGGTAATTTTGAATACCGAAAACTCGAACAATTGAATTAGGTTTGGAAAGATTATTTCACCTAACCGAACCGAACTTGACATAAACGACCCCATTGAATTAAAGTGGGGCAAGGGAATTAAGAGCCTAATCTTTTGGTACTTAGCCTAGAAGGAAGAAAGTGTGTTGGCTTCCCTTGCATGTATGGCGCCGACGGGAAAGGATATGGCAAGGCCCTGCCATAAAGAAAGCCGTCCTTTTCCATTTCTTTTATTTTTTTCTTTTTTAATTTCTAAAAATGAATAAATTGTTATTTAATTATTATTTTTTGTGGGAATTATAAATAGAATAAAATAAAATAAAAATGAGTTTAATTGCATGCTTTTCGTGAAAGGCAAATGTTTGTTCCTATAAATAAGAAAGAAAAAGGGAATTTTTATTAGTGGATGATGAATCATATGAAATGGAATTAGATTCGAATCTTTTTATGTAGAGCTTGGATCTCCAAATTTAATATAATATATATATTTTATATATATTGTCCACTTTGATCTGTTACATATTGCCGTCAGCCTCACGAATTAAAAATGTGAGATCTCACAATCCATCTTCTTGGAGGTTTAACATTGGGCGTCTGACACTCGTACCATTTGAAAAAATTGTCTGGACGGTTGGATGATGAAATCCCACCTCGCCCCATTGGTTTGAACCCTTTTGGTATACTCTCTCCATTGGTTTGAGTCCTTTTGGTAACTCAAAACAAAGTTACGAGAACTTATGTTCAAAGTGGGCAATATCATACCATTGTAGAGAGTGGTGTTCCTAAAAAAAAAAAACTAATATTGGATATTGTGAGAGCCGAGGATAAATGGATAATATACATTTATTTATTTATCTATTTATGGTACAATGTGTCAGTGAAGAATGTTTTTTTTTAAATTTAATTATATAAATATGAAATTAAATAATAATAATAATAATAATAAGAAACCTAAGAGGGGGAATGAGTGGGACACCGAAAGCTCAGGCGAAGAAAGTTGAAAGCTGTGGCTCCGTAAAGGGCTGTACAGTTGGAGCCATTATGAGCCCATATGCCTTACAGTTGGATTTTTTTAAATATCTCTCCTCTATTATTTATTATTTATTATTATTATTAAATTATTTGCCTCGCAATAATTACCTAAATTATATATATAAATATATCCACTTACTTACCTCATAATCATTTTTCAAATAAATTATTACCATTTTAATTTTTTTTTTGTCTCCTCATGTGGAGTACAATTCACTAAGTATATTATATTATTTGCTTTATTAACAATGAATTATTTTCTAGTCCTTCATATTTGAATAAATTCTAATTTTAAATTTTATTAGTAAATTTAAGTTTGGGTTAAAAAAATTTATGAAAATTTATTTTTTTTAATTTAATTTTATATCTTTTATAATTAACTTATATATTATATATCTCTAAAAGGTTAATTTTACTTTATTAGATTCGAAAATTTTAAAAGATGTATTGAATTTAATAATATGGTGGTGAATCGACGTGAAAGGACTTGAGTGAATGCATTATTCATTATCTTTACGAACATCACCTTTAAAAAAAAAACATTGGATTTTGACGTATCTTCATTATGGAATGTAGACCAATTTTAGGTCAGACGTTACATTCTTCTTGTTGTTGTACCACCATTTTTAATAAGCAATAAATATAAATAAATTATATATATATAATTTAAATGATGGGTGTTCATATAATCTCATAATTTGACTTGGATAACACAACTTAGCAGGTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTCAAGTTTTAAGTTGAGTTGAATTATGAAAAATCTAGAGTTTAGTTCAGTTTACGAGTTGACATTTTTTTTTGTCGGATGAACCCACCAACCCGAAATTAGGGTTACAACCAACCTAATCTTATTAAAAAAAAAAAAAATACGTTGTGACTTGTAAATATTTAATATTTGAATTTTGTTAGATTTTAGTTATTAATGTAACGTGTATTGTGAATAATTATGTTTTTTTAAAATAATAAATAAAAAAAAAAGAATCATATGACAACGGGTTGAGTTGGGTTGGGTTGTGAACTTTAATTTGGTTGTTCGGGTTACCAACTCATTGAATTTCACCCGATGAATATATATCAGCATGACATGAATAATATTCAAAACTAGGTTGTAGGGTCGAGTTCTATACACAAAACATATAGAAATGCTAAAATTTTTAGGGTCGGGACACCTAGTCCCTTCTCATGTCGGCTCATGAGAGGTGATGATGGAAAGAATACTTAACTTTAGGCTAATTACAAAAATGTTAAACAACCAACATGATTAGCTAGCTTGCTTTGCCTTGTCTTCAATAAATGCTTTAATATTTGCAACTTTATGATTCAATCACATTTATCAAATCTCCATAAGATCTCACAAATTAAAGCATCCATCTTAGTTTTTGTGCCCACTAACTGTTTGTCAAAATGCCCAAATGCCCATTTCGCCTGCCCTTCGCCGCCGCCCATGCGCCCCCGCCCCATGCGCCTTGCTGCGCTGCCAAGCCTTTCCCCATTTTGCACACCCTCGTAGAATCACTCATCTAAGGACCACTTAATTTTTTTTCTTCTTATTATTCTATTGAACAACTTTTACTCTTTCAATGCTTCATATCTTAACTTGGAATGATGCACGAAACAACGAGTTGTTTGGATATAAATAAGTGAAGAGAAGTTCCACCCGTAATTTTAATTACTCTAAATTTATGAAATTTGGGGTTGGAAAGTATAAATTTATATTACCCATGTTTAAATTTATACAACAATTTAGGTTTTTCGGTTGAATAGTGAGCTGATCATTTGAATATTATTTAACTATACTTATATTAACATATAAAGTTTTAGAGACGAATTAAGACGAAAGATACAAAACACGTGACACTCGAGCAAATGAATGATACATGAATGGATCAAGACCAGAGTGATCAAGAGTGATCAAGAAAGTAGGATGGTTTAATAATTATTACTTATATTAACAAATTCATTTTGATTTTTTTTTAATGACTGATTTTGTATTTCAAAAGTGAATGGACTATTTGAATCATGGGCCCTTAGTCGTGGCCCAGTTAGATTGGGTTACAGAAACATAATAATGTCGGCCCAACTAACATTGTCGGCCCAAAAAAAGTACTTTTCAATTCAACCCCCACAATGTTTATTTATTTCAAAATGGAACTTTTTAATATAGTTTTTTATATATATATATATATTTTTATTTATATATGGTAACAAATATTAATACGAAGTAACAGTTTGTTTGATTTAATATTTATTAAAAGAAGGGCTACTTATGATATTTTGTATATTTAATGGATGATTTTGATAATAAAATGAGAAAAAGGGGCAACTTTGAAATTTACATTATCGTTAAAATTCTTTTTATATTAAATTATATTTTTTCATGACTGTAATTTTAGAAAATAAAAACAAAGAAATTTATTTAATAAAGAAAATAATAAATAAATAGGCTAGAAGAAAGGTCGAGAAATCGACAGCGCCGGTATTAGAACTCGGAATAATCTTCAAACTCCATCAATTAAAAGAGGAAAAAAACGGACTTTGATTCTTGGCTAAGGAAGCGAAAGCGCGCACGGACACGAATTTGAGGTCTGATTGACGCCGGATCCTTGCTTTCGTCGGTCGGAGGATTCTTAATCCGAGAGTTTTGTACTTTTTTTTTTTTTTCCCTTCATAGTATTGTCTCTAATTTCATCTGATAACCCCGGGATCGATTATCCTTCCGACCGATGTTCAAGTTTTGGTATGATCTCTTCTCTTTCTCCTTTTCATTTCCACTTTCATGTATTTGGATTGGGATTTCTTCTGTAATTCGTTTGCAACTCTGATTGTTCGATTTTTGGGCGTTCCGGGTAGTCTGTGTATCATTTTCTTGATTAAGCTGCTTTTTCAACTTGGTTTTAGATCGAACATGGTTCGTAGTTCGTTTGGGATTTGTTGGTTGGTTAGAAAATAGATTACGGTTTCTTTTGCTATGAATTGAGGGTTTAGTAGCTTATAGTTGGATCAATACCGGCTGTTTGTGCTTTATTTTGTCAAAATTTCTCGTAACAAGGTCCAGCGGATGGCTGTTTTATATACTTTAGATTGAAGGTTGGTCCTGTTTGAGGTGACTGAGGGACAGATTTGCTCCGCATAGATCTGATCGGACTGCATGCATTGTCAGTTCGACACATTGCTTACTCAAGGTTGTGTGGACAGTTCGCAGTTGGCAAAGCCAATTTCTTGGGTTCCAAATAGTCTATAACCTCAATCCCTTCCAGTTTATTTAAAAGATGTCTGCATAGTGTATTTGAGAAGTGATGCACGGAAACGAAGGATCATTTGGAGTTCTTCGTTGCCCCTGCTAACTTTCTGAAGAAACAATTTGGATAGTTTGTACTTGCTGGAAAGAAACCACATATAACTTGCGGGAGAGTATTTGATCTTTCATGTTGTGGAGAATTTGTTCATGTTTGGGAAAAGGACTAGCATGCCTTCATCTGGATTCAGCATCACTTTTTTTGTTTTCTTCTTCTGATCACTGAGCAATGTATTCCACCTCATTAGCTCTGGATTTTCCATACTTTCCCATTGTTCAGTTTTTAGGAAATGTTTTGTTCTTAGTCGCAAACTTGCAACGATTCTTGTTGATTGGTGATTTGATCTGATTCCACTTGAGCTATTGTTTTTCATATGTGATTTGCATAGTATTGAAACATCTGAGTGATTTTGTATCTATTTTCAGGGGATCTCAGGAAGAACAGGTACGTCCTCCTCAAGATGTTATCACACAATCATGGTATCCACCTTCTGTTAGCTCCTCTCGCCCTGGAACCCCAGGTAGCACCTCCTCCAGGCCACAATCTCCATCACACGTTTCACCGGCTGAAGCTGCTGGCATTATTTCTGCTTTGAAGGACAAAAGGTATAGCTTAAGGTCCATGACTACCTGAAATAATGCTTTTTTGCCCACTCTTCGATTCCCCGTGAACATTTATATTTGAAAGTTGATGGTTTTTGGATTATTTGTTTCAGTTCTATTGACCTTTATTTGGCTGTTTGTACATTGAGTAAATTTTAGTGCCTACTTTTTAATGTGTGTTTAGTTTGGAAAACCCATCTCTTGTGTGGGTGTGTATGTTAAAAAAAGAAAAAACAAGAATCAAACGTCATTGATGGATTAAAAGCTGCAGCATAAAGGGTGTAAGCAATCAACCCGGAATAGCCAAGTGGTTGTATAATAGTCCTTCATTCGACATTAATGAAAAAAGAACTGTAGTTAAAAAAAAAAAAAGGTGATATAGGTATATAGTGAAACTCGAAAATGGATAGTACTGCAAATGTTCTCTCTTTAGAAGTCTCTTTAAAAATTCTAAAGTTTCAAGCTAAATTGAAATCTTGCATAAGAGAAACGACCTCAGGGCTTGAGCATAGGAATAGTGGAGGAAGAGATGATTAAGATTTCCCATAGCTGAAGCTTGGTGATAAACAGAAGTTGTGATGTGCCTCCTTGAAGGCATTTGAGCCGTATTAAGGCCCAGCCAACAACAAATTCCAGCAATCTAATCTTCTTCGGTACTCCAGCGATTTGGATGCATCCATAGAGACTTTGATTCATAAAATAGGCTCTATCATGAAGAAAAGTAAAGGAGCTGCAAGCATGGCTGTTAGTTGCTCTCTTGTCCTTAGGATATGATTAAAGGAGCTGCTCTAGTGTCCTTAGGATATGATCAGAGTTAAGGCTTTCTCAATCCCATTGTCTTACAAAGATTTTTTAAACAAAACCTCTTACGACTATGTTTTCGGAGCTCGAAATCTGTTGTAATCTGGAAGAGATAACTTTTAGAGGTTTCACCCAACAATTGTTCTAGAAATTAGAGTTCTCCCATTATCTATTTTTGATGGTTAGAAAATCTTGACATCTTCATTCTTCTCTTACATACAATCACAAAATTATAGGGGGTCTTAATAGAAGGCACTATCACTATGTTCATATATCGAGCTTTGTCTTAAAGTCAACATTTAAAATGGAGAGAAGACCTATGTTTGTTTCCTAGACTGTCTCATTTGTGGCTCTTCTTGGTCTTAACTTACTCCTTTCAACAGTTATAGTCAACAATTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCCATTTTGAAGAGCTTTTTGTAACCTCCGCTGGCAAGGTCTTCTACTTTTATATCGAGCGTTTTATTTTTTTTCAATTGAAACTCCAAACTGCTACCTTGAGTATCTTCTACTTTTATTTTCTGGACGAGGAAATTCTTTTAGTAATCATTTTTGTAAGTAAACCTATGATGTTTGCACGTTTATGGTGGTGTTGTCCATTTTTTTTATTTAATATTAATTTTGTGGCTTCTGATTTCAAATGCACGCTATGAATACCTGAACCAGATTGCAACCTTCTTGGTTTCATCATTTGAGGATATTGATCACTCTCTTTTTTTCTCCCCTTTTTAATTTGGGCAGTGTTGATGAGTTACGAAAGCTATTGTCGGATAAGGATGCTTATAATCAATTCCTCCTTTCACTCGACCAGATTAAAATTCAGAACAACGTAAGTTACATTTGCCCTGTAGTTCTTGAACTTCCTCAATTGTGAAGCTTAAATGTAAGAAATTAAAGTTCATATCTTGTTTGTTTCTGATAGAGGATTAACATGCTCATCTGATGGTTGTCTTAGGCAGGTTGTTTATTTATTCATTCATGCAGCTTTACCATTTCAGATTCCATACTAGCAATTGCAGAGCATTACTTGATCTTTCCTAGTATACTACTTTTAAGCACTGCACATTCATTCTGTATATATTCATTGTTATTTCAATGCCGAGTTAATTCCATTTTCAAAGAAAGCACAGGATTTTCTTTCCTTCATTATATCTCTCTTGGCTTTGAATTCGATAAGCTTGGACTTATTTTCAATTAAAGGGGTGAACTGGCAACATCCTAAAAAATAGCATCATAAGTGGAAGAAAATTTAGGGTGGAAGGTTTTGGCCTGGATCTATTCTTCCAAGGATCCCTCAGCTGCGCCTCTACCATGCCTTGATGCAGTCTGTATTCTTCTTTCTGTATGCATCCATTTCTAGTTTGGGGGCCTCAACAAGAACTTTAACCTCCTTATGTTGAGGCCGACCAAGATCAAAATCCCAATCCCACTGTGCTTGAACCCCTGACCATCGAGATGTCGGCTATGTTTGGAAGCTGCTTATGATCATTCTAATAGTAAAAAATCAAGACTTTCATGACTAACACGTGCCTAATAGTTTTATACATTGAATATCTTAGGTGATGACTACACCTAGATATGTGAATGAAACAACTCTAGTTACTCATAACCACCTCGTGTTAACGGAGGATCTTTGCAACCATATCAGTTGGGTCCATGCGTCAAAATCAATCTTTTTAATAACTGTTTCCTCATGATTTCTTATGTTTATCATGTGGTTCTTGTTGGCCCATATTATTGTAGCACCCAATATCATGGCTTCTCTTATATGCTTCTTCTTTGTAAATTAAAATGATTGCTGATTGGATCTTTGCTGCTTTCAATTTTTGATAATTTTCACCAGCTAAGAGAGGAGCTGCGCGAGGAAACTCTTCAGCTTGCAAGTAAGTAACATAGATTTTTTAAAGACTTTTCTGCTTGCCTTTCCTTCTAAGCATTTCTCTATGGGACAAATCTCAACCATCATTTTAACTTGAAAAGGTGAGAACATGGAAAAGGAACCACGCATCATGGAACTTAGAAACCAGGTATGGGTTTATCAGAAAATTACTTATTTCTCTTGCTGGTTGAATTCACTTGCCCTCCGTGCTGAACTCCGCCCTCCTGTTCATTCTCTCACAGTGCAGAATAATCCGGACAACTGAACTGGCTGCTGCCGAGGAGAAGCTGAACGAGCTTGACCGAAAGAAAAAAGAGATCTTGAACCTCTGTTCTCCTGCTTCACTTATCCGAAGGCTTCAAGGTATATTGTAGTAGTTGTTTATTGGATTTCTGATTTTGTTATCATTGATAATTACCGGCTAGGCTTGAATTCAAGGCTAGGGAGATTGGGCATACATATCCTTCCAACAATCATTCCTATCTCTGTTAATGAGTAGAGTAGTTTAAAGGATCCCTTGTAACGTTCCAACTAGAGGCTAGTAAGACGTTCATAATTTCATAGATAGTAAGAAGAGGTCATGAGTTTGGAACTTGTTTTTGAGAATGAATCTTCAAAGCTCAGGATTGAAAATTTTGTTCGGTTAAAATTGTTTTCAACACCGTTTTTACAAAAGAAAACGTTATCGAACAAGTCTACTTCCGAAACTGATAGCTGAAAGGAAGTTCTTTGTATAATTAGAAAAGAAGTAAAATTTTATTTCTCCTGTTCTGCATTTCGACACACCACAGAATTCTCCATTACTTGATCTGGTCTTGAATCCAAACTTTGTTTATGCAGAGAGAATGAAGGAGACTGAAGAGGAGTCGGACAATCTGCACAGACAGCTCCTTGACAGAGAGATAGATTTGGGTTCTTTTACTCACAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATCCAACTTGCTGCTACCACCACCTGAGCTGAACTGCAGAACATCGATAGCGACACTGATCATGTAAATTCTTACTCTTTTACTGCTTATGCAACTGCTACAAACACTTCTTCAAGTAGAGGTTGAAATCATTTGAATCCCAGATGGGGTTTTTACCAGTTGTTTCCCTTGTGAAAGTCTGTTCGTTTTACTGATGACAGTAACTTGATTCTTTGTTTTCATTTTGATGATCGTTTTTTCTCTTTGTAATAATCATTGTAAAAAATGATACCCGTTCACTTTTACTATTCATATCCTCATACTTTACTTGCACTTTATAAGTTAAAATATATTCTATCTTGGTT

mRNA sequence

ATGAAAAGGCCAAGGCTGAAGAGACGAGCCGTCAGATCGAATTTGACAGAGATGACAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCGTCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTGATCTTATTCTCCTTTCCTCCTCCCTATTCCCACCAACGGCTCTCATTCCTCCACGTTTCATCTTACCTGCCACGTGTCGTCTTCTCATGGGGATCTCAGGAAGAACAGGTACGTCCTCCTCAAGATGTTATCACACAATCATGGTATCCACCTTCTGTTAGCTCCTCTCGCCCTGGAACCCCAGGTAGCACCTCCTCCAGGCCACAATCTCCATCACACGTTTCACCGGCTGAAGCTGCTGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTACGAAAGCTATTGTCGGATAAGGATGCTTATAATCAATTCCTCCTTTCACTCGACCAGATTAAAATTCAGAACAACCTAAGAGAGGAGCTGCGCGAGGAAACTCTTCAGCTTGCAAGTGAGAACATGGAAAAGGAACCACGCATCATGGAACTTAGAAACCAGTGCAGAATAATCCGGACAACTGAACTGGCTGCTGCCGAGGAGAAGCTGAACGAGCTTGACCGAAAGAAAAAAGAGATCTTGAACCTCTGTTCTCCTGCTTCACTTATCCGAAGGCTTCAAGAGAGAATGAAGGAGACTGAAGAGGAGTCGGACAATCTGCACAGACAGCTCCTTGACAGAGAGATAGATTTGGGTTCTTTTACTCACAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATCCAACTTGCTGCTACCACCACCTGAGCTGAACTGCAGAACATCGATAGCGACACTGATCATGTAAATTCTTACTCTTTTACTGCTTATGCAACTGCTACAAACACTTCTTCAAGTAGAGGTTGAAATCATTTGAATCCCAGATGGGGTTTTTACCAGTTGTTTCCCTTGTGAAAGTCTGTTCGTTTTACTGATGACAGTAACTTGATTCTTTGTTTTCATTTTGATGATCGTTTTTTCTCTTTGTAATAATCATTGTAAAAAATGATACCCGTTCACTTTTACTATTCATATCCTCATACTTTACTTGCACTTTATAAGTTAAAATATATTCTATCTTGGTT

Coding sequence (CDS)

ATGAAAAGGCCAAGGCTGAAGAGACGAGCCGTCAGATCGAATTTGACAGAGATGACAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCGTCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTGATCTTATTCTCCTTTCCTCCTCCCTATTCCCACCAACGGCTCTCATTCCTCCACGTTTCATCTTACCTGCCACGTGTCGTCTTCTCATGGGGATCTCAGGAAGAACAGGTACGTCCTCCTCAAGATGTTATCACACAATCATGGTATCCACCTTCTGTTAGCTCCTCTCGCCCTGGAACCCCAGGTAGCACCTCCTCCAGGCCACAATCTCCATCACACGTTTCACCGGCTGAAGCTGCTGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTACGAAAGCTATTGTCGGATAAGGATGCTTATAATCAATTCCTCCTTTCACTCGACCAGATTAAAATTCAGAACAACCTAAGAGAGGAGCTGCGCGAGGAAACTCTTCAGCTTGCAAGTGAGAACATGGAAAAGGAACCACGCATCATGGAACTTAGAAACCAGTGCAGAATAATCCGGACAACTGAACTGGCTGCTGCCGAGGAGAAGCTGAACGAGCTTGACCGAAAGAAAAAAGAGATCTTGAACCTCTGTTCTCCTGCTTCACTTATCCGAAGGCTTCAAGAGAGAATGAAGGAGACTGAAGAGGAGTCGGACAATCTGCACAGACAGCTCCTTGACAGAGAGATAGATTTGGGTTCTTTTACTCACAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATCCAACTTGCTGCTACCACCACCTGA

Protein sequence

MKRPRLKRRAVRSNLTEMTKFGAYAAFGSSLRLYVGTRSAFPLRLILFSFPPPYSHQRLSFLHVSSYLPRVVFSWGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPAEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRIMELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLHRQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT

Homology

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BLAST of CmoCh06G004180 vs. ExPASy Swiss-Prot
Match: Q3EBL9 (Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS37-2 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.6e-62
Identity = 134/217 (61.75%), Postives = 164/217 (75.58%), Query Frame = 0


Query: 75  WGSQEE---QVRPPQDVITQSWYPPSV----SSSRPGTPGSTSSRPQSPSHVSPAEAAGI 134
           WGS+E+   Q RP  +     WY PS+    SSSRP T G      Q PSHVSP EAAGI
Sbjct: 5   WGSKEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG------QIPSHVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I+ LKDKSVDELRKLLSDKDAY QFL SLDQ+ IQNN+REELR+ETL LA EN+EKEP+I
Sbjct: 65  IAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEKEPQI 124

Query: 195 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLH 254
           +ELRNQCRIIRT+ELA A+EKLNEL+ +++EIL   SP SL+ RLQ+ M + +EES+ L 
Sbjct: 125 VELRNQCRIIRTSELATAQEKLNELENQREEILKFYSPGSLLHRLQDAMNQVDEESEELQ 184

Query: 255 RQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
           ++ ++++ID  +F  KYKKLR  YHRRALI LAA T+
Sbjct: 185 QKFMEKDIDTAAFVQKYKKLRSKYHRRALIHLAAKTS 215

[Close]

BLAST of CmoCh06G004180 vs. ExPASy Swiss-Prot
Match: Q9SCP9 (Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS37-1 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.4e-62
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 0


Query: 75  WGSQEEQ--VRPPQDVITQS-WYPPSVSSSRPGTPGSTSSRPQS----PSHVSPAEAAGI 134
           WGS+++Q     PQ+  +QS WY PS+ SS       +SSRPQS     + VSP EAAGI
Sbjct: 5   WGSKDQQQGQSRPQEASSQSPWYSPSLVSS------PSSSRPQSSGQISAQVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I  LKDKSVDELRKLLSDKDAY QFLLSLDQ+K+QNN+++ELR ETLQLA +N+EKEP+I
Sbjct: 65  IVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQI 124

Query: 195 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLH 254
           MELRNQCRIIRTTELA A+EKLNEL+R+K+EIL   SP SL+ +LQE M + +EES+ L 
Sbjct: 125 MELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQ 184

Query: 255 RQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
            + L++EID  +F  KYKKLR  YHRRALI LAA T+
Sbjct: 185 EKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTS 215

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BLAST of CmoCh06G004180 vs. ExPASy Swiss-Prot
Match: A5D8V6 (Vacuolar protein sorting-associated protein 37C OS=Homo sapiens OX=9606 GN=VPS37C PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.4e-04
Identity = 40/147 (27.21%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 128 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 187
           +  LKDK++ EL +L +D +A +Q  L   +++     RE        LA  N+E +   
Sbjct: 1   METLKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGP- 60

Query: 188 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLH 247
           +E+       R  EL    E+  E   K ++  +   P +L+  LQ    + EEES+ + 
Sbjct: 61  LEISRSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMA 120

Query: 248 RQLLDREIDLGSFTHKYKKLRMDYHRR 275
            + L+ E+ L +F   +  +RM  H R
Sbjct: 121 EKFLEGEVPLETFLENFSSMRMLSHLR 146

[Close]

BLAST of CmoCh06G004180 vs. ExPASy TrEMBL
Match: A0A6J1FTQ6 (vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446745 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.0e-106
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 75  WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPAEAAGIISALKDK 134
           WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPAEAAGIISALKDK
Sbjct: 5   WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPAEAAGIISALKDK 64

Query: 135 SVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRIMELRNQC 194
           SVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRIMELRNQC
Sbjct: 65  SVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRIMELRNQC 124

Query: 195 RIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLHRQLLDRE 254
           RIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLHRQLLDRE
Sbjct: 125 RIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLHRQLLDRE 184

Query: 255 IDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
           IDLGSFTHKYKKLRMDYHRRALIQLAATTT
Sbjct: 185 IDLGSFTHKYKKLRMDYHRRALIQLAATTT 214

[Close]

BLAST of CmoCh06G004180 vs. ExPASy TrEMBL
Match: A0A6J1L1H8 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498295 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.4e-103
Identity = 205/210 (97.62%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 75  WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPAEAAGIISALKDK 134
           WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSP+EAAGIISALKDK
Sbjct: 5   WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPSEAAGIISALKDK 64

Query: 135 SVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRIMELRNQC 194
           SVDELRKLLSDKDAYNQFLLSLDQIKIQNNLR+ELREETLQLASENMEKEPRIMELRNQC
Sbjct: 65  SVDELRKLLSDKDAYNQFLLSLDQIKIQNNLRDELREETLQLASENMEKEPRIMELRNQC 124

Query: 195 RIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLHRQLLDRE 254
           RIIRTTELAAAEEKLNELDRKKKEILN CSPASLIRRLQERMKETEEESDNLHRQLLDRE
Sbjct: 125 RIIRTTELAAAEEKLNELDRKKKEILNHCSPASLIRRLQERMKETEEESDNLHRQLLDRE 184

Query: 255 IDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
           IDLGSFTHKYKKLRMDY RRALIQL+ATTT
Sbjct: 185 IDLGSFTHKYKKLRMDYLRRALIQLSATTT 214

[Close]

BLAST of CmoCh06G004180 vs. ExPASy TrEMBL
Match: A0A6J1J6C4 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481746 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.5e-94
Identity = 188/220 (85.45%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 75  WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSS----------RPQSPSHVSPAEA 134
           WGSQEEQVRPPQDV TQSWYPPSVSSSRP TPGSTSS          RPQSPSHVSPAEA
Sbjct: 5   WGSQEEQVRPPQDVTTQSWYPPSVSSSRPATPGSTSSNHSSSHRLSGRPQSPSHVSPAEA 64

Query: 135 AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKE 194
           AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQ++ QNNL++ELR+ETLQLASEN+EKE
Sbjct: 65  AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVQTQNNLKDELRKETLQLASENLEKE 124

Query: 195 PRIMELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESD 254
           PRIMELRNQCRIIRTTELAAAEEKLNELDRKK++I+ LCSPASL++RLQERMKETEEESD
Sbjct: 125 PRIMELRNQCRIIRTTELAAAEEKLNELDRKKEDIMKLCSPASLLKRLQERMKETEEESD 184

Query: 255 NLHRQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
           N+H QLL+REIDL SFTHKYK+LRM+YHRRALIQLAA TT
Sbjct: 185 NVHMQLLEREIDLSSFTHKYKRLRMNYHRRALIQLAARTT 224

[Close]

BLAST of CmoCh06G004180 vs. ExPASy TrEMBL
Match: A0A1S3B6H0 (vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucumis melo OX=3656 GN=LOC103486542 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.5e-94
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 75  WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSS----------RPQSPSHVSPAEA 134
           WGSQEEQVRPP DV TQSWYPPSVSSSRPGTPGSTSS          RPQSPSHVSPAEA
Sbjct: 5   WGSQEEQVRPPPDVSTQSWYPPSVSSSRPGTPGSTSSNHSSSQRLSDRPQSPSHVSPAEA 64

Query: 135 AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKE 194
           AGIISALKDKSVDELRKLLSDKD+YNQF LSLDQ+KIQNNLR+ELR+ETLQLASEN+EKE
Sbjct: 65  AGIISALKDKSVDELRKLLSDKDSYNQFFLSLDQVKIQNNLRDELRKETLQLASENLEKE 124

Query: 195 PRIMELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESD 254
           PRIMELRNQC IIRTTELAAA+EKLNELD+KK+EIL LCSPASL+RRLQE MKETEEESD
Sbjct: 125 PRIMELRNQCSIIRTTELAAAKEKLNELDQKKEEILKLCSPASLLRRLQESMKETEEESD 184

Query: 255 NLHRQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
           NLHRQLLDREIDL SFTHKYKKLR++YH+RALIQLAA TT
Sbjct: 185 NLHRQLLDREIDLSSFTHKYKKLRINYHQRALIQLAAKTT 224

[Close]

BLAST of CmoCh06G004180 vs. ExPASy TrEMBL
Match: A0A6J1F5W3 (vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442393 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.5e-94
Identity = 189/220 (85.91%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 75  WGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSS----------RPQSPSHVSPAEA 134
           WGSQEEQVRPPQ V TQSWYPPSVSSSRP TPGSTSS          RPQSPSHVSPAEA
Sbjct: 5   WGSQEEQVRPPQHVTTQSWYPPSVSSSRPATPGSTSSNHSSSQRLSGRPQSPSHVSPAEA 64

Query: 135 AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKE 194
           AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQ+KIQNNL++ELR+ETLQLASEN+EKE
Sbjct: 65  AGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQVKIQNNLKDELRKETLQLASENVEKE 124

Query: 195 PRIMELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESD 254
           PRIMELRNQCRIIRTTELAAAEEKLNELDRKK++I+ LCSPASL++RLQERMKETEEES+
Sbjct: 125 PRIMELRNQCRIIRTTELAAAEEKLNELDRKKEDIMKLCSPASLLKRLQERMKETEEESE 184

Query: 255 NLHRQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
            +H QLL+REIDL SFTHKYKKLRMDYHRRALIQLAA TT
Sbjct: 185 KVHMQLLEREIDLSSFTHKYKKLRMDYHRRALIQLAARTT 224

[Close]

BLAST of CmoCh06G004180 vs. TAIR 10
Match: AT2G36680.1 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63
Identity = 134/217 (61.75%), Postives = 164/217 (75.58%), Query Frame = 0


Query: 75  WGSQEE---QVRPPQDVITQSWYPPSV----SSSRPGTPGSTSSRPQSPSHVSPAEAAGI 134
           WGS+E+   Q RP  +     WY PS+    SSSRP T G      Q PSHVSP EAAGI
Sbjct: 5   WGSKEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG------QIPSHVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I+ LKDKSVDELRKLLSDKDAY QFL SLDQ+ IQNN+REELR+ETL LA EN+EKEP+I
Sbjct: 65  IAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEKEPQI 124

Query: 195 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLH 254
           +ELRNQCRIIRT+ELA A+EKLNEL+ +++EIL   SP SL+ RLQ+ M + +EES+ L 
Sbjct: 125 VELRNQCRIIRTSELATAQEKLNELENQREEILKFYSPGSLLHRLQDAMNQVDEESEELQ 184

Query: 255 RQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
           ++ ++++ID  +F  KYKKLR  YHRRALI LAA T+
Sbjct: 185 QKFMEKDIDTAAFVQKYKKLRSKYHRRALIHLAAKTS 215

[Close]

BLAST of CmoCh06G004180 vs. TAIR 10
Match: AT3G53120.1 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 239.6 bits (610), Expect = 3.1e-63
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 0


Query: 75  WGSQEEQ--VRPPQDVITQS-WYPPSVSSSRPGTPGSTSSRPQS----PSHVSPAEAAGI 134
           WGS+++Q     PQ+  +QS WY PS+ SS       +SSRPQS     + VSP EAAGI
Sbjct: 5   WGSKDQQQGQSRPQEASSQSPWYSPSLVSS------PSSSRPQSSGQISAQVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I  LKDKSVDELRKLLSDKDAY QFLLSLDQ+K+QNN+++ELR ETLQLA +N+EKEP+I
Sbjct: 65  IVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQI 124

Query: 195 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLH 254
           MELRNQCRIIRTTELA A+EKLNEL+R+K+EIL   SP SL+ +LQE M + +EES+ L 
Sbjct: 125 MELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQ 184

Query: 255 RQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 285
            + L++EID  +F  KYKKLR  YHRRALI LAA T+
Sbjct: 185 EKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTS 215

[Close]

BLAST of CmoCh06G004180 vs. TAIR 10
Match: AT2G36680.2 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 83/126 (65.87%), Postives = 94/126 (74.60%), Query Frame = 0


Query: 75  WGSQEE---QVRPPQDVITQSWYPPSV----SSSRPGTPGSTSSRPQSPSHVSPAEAAGI 134
           WGS+E+   Q RP  +     WY PS+    SSSRP T G      Q PSHVSP EAAGI
Sbjct: 5   WGSKEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG------QIPSHVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I+ LKDKSVDELRKLLSDKDAY QFL SLDQ+ IQNN+REELR+ETL LA EN+EKEP+I
Sbjct: 65  IAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEKEPQI 124

[Close]

BLAST of CmoCh06G004180 vs. TAIR 10
Match: AT2G36680.3 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-33
Identity = 90/156 (57.69%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 75  WGSQEE---QVRPPQDVITQSWYPPSV----SSSRPGTPGSTSSRPQSPSHVSPAEAAGI 134
           WGS+E+   Q RP  +     WY PS+    SSSRP T G      Q PSHVSP EAAGI
Sbjct: 5   WGSKEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG------QIPSHVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I+ LKDKSVDELRKLLSDKDAY QFL SLDQ+ IQNN+REELR+ETL LA EN+EKEP+I
Sbjct: 65  IAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEKEPQI 124

Query: 195 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLC 224
           +ELRNQ   I         + L+EL +  K +L++C
Sbjct: 125 VELRNQVNNI--------IQSLSELIKYMK-LLSIC 145

[Close]

BLAST of CmoCh06G004180 vs. TAIR 10
Match: AT2G36680.4 (Modifier of rudimentary (Mod(r)) protein )

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-33
Identity = 90/156 (57.69%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 75  WGSQEE---QVRPPQDVITQSWYPPSV----SSSRPGTPGSTSSRPQSPSHVSPAEAAGI 134
           WGS+E+   Q RP  +     WY PS+    SSSRP T G      Q PSHVSP EAAGI
Sbjct: 5   WGSKEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSG------QIPSHVSPGEAAGI 64

Query: 135 ISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLREELREETLQLASENMEKEPRI 194
           I+ LKDKSVDELRKLLSDKDAY QFL SLDQ+ IQNN+REELR+ETL LA EN+EKEP+I
Sbjct: 65  IAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEKEPQI 124

Query: 195 MELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLC 224
           +ELRNQ   I         + L+EL +  K +L++C
Sbjct: 125 VELRNQVNNI--------IQSLSELIKYMK-LLSIC 145

The following BLAST results are available for this feature:

BLAST of CmoCh06G004180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EBL9	2.6e-62	61.75	Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana...	[more]
Q9SCP9	4.4e-62	63.13	Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana...	[more]
A5D8V6	5.4e-04	27.21	Vacuolar protein sorting-associated protein 37C OS=Homo sapiens OX=9606 GN=VPS37...	[more]

BLAST of CmoCh06G004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTQ6	1.0e-106	100.00	vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucurbita mosch...	[more]
A0A6J1L1H8	1.4e-103	97.62	vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxim...	[more]
A0A6J1J6C4	3.5e-94	85.45	vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita maxim...	[more]
A0A1S3B6H0	3.5e-94	86.36	vacuolar protein-sorting-associated protein 37 homolog 2-like OS=Cucumis melo OX...	[more]
A0A6J1F5W3	4.5e-94	85.91	vacuolar protein-sorting-associated protein 37 homolog 1-like OS=Cucurbita mosch...	[more]

BLAST of CmoCh06G004180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36680.1	1.8e-63	61.75	Modifier of rudimentary (Mod(r)) protein	[more]
AT3G53120.1	3.1e-63	63.13	Modifier of rudimentary (Mod(r)) protein	[more]
AT2G36680.2	2.0e-33	65.87	Modifier of rudimentary (Mod(r)) protein	[more]
AT2G36680.3	4.4e-33	57.69	Modifier of rudimentary (Mod(r)) protein	[more]
AT2G36680.4	4.4e-33	57.69	Modifier of rudimentary (Mod(r)) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	COILS	Coil	Coil	coord: 202..222
None	No IPR available	COILS	Coil	Coil	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..118
None	No IPR available	PANTHER	PTHR13678	WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED	coord: 78..283
None	No IPR available	PANTHER	PTHR13678:SF2	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A	coord: 78..283
IPR009851	Modifier of rudimentary, Modr	PFAM	PF07200	Mod_r	coord: 132..274 e-value: 1.1E-30 score: 106.6
IPR009851	Modifier of rudimentary, Modr	PROSITE	PS51314	VPS37_C	coord: 206..284 score: 14.566012
IPR029012	Helix hairpin bin domain superfamily	GENE3D	1.10.287.660	Helix hairpin bin	coord: 208..279 e-value: 3.1E-9 score: 38.8
IPR037202	ESCRT assembly domain	SUPERFAMILY	140111	Endosomal sorting complex assembly domain	coord: 224..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G004180.1	CmoCh06G004180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component	GO:0000813	ESCRT I complex