CmoCh06G004170 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G004170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPLATZ transcription factor family protein
LocationCmo_Chr06: 2002948 .. 2004076 (-)
RNA-Seq ExpressionCmoCh06G004170
SyntenyCmoCh06G004170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATCCAAAAGCAGCGTAAGCGCCAAACTTTGTCATCTCTGTCAAATTCGATCTGACGGCTGTAATGAAGCCTCAGCCACCAAATCCATCTCCACCGTCCATAGGCTCCTGCTTTCCACAACACATTAACCTCGTCTCTTCAGCCTTGGCCTTTTCATTTTCGTTTCAATTCTCAGAAATTGGCATCGGTTTTCTCTCTGAGTTATGATAATAAGGCAAAAGATCACATTTTTTTGGGTACCCATTTGAGAATAAATATGGTAAGCCAAAAAAAACTCACATTATTCTCTGTTTTTCTTCGTTAAATTGATTCTTGGGTTTGTTCTTTTCAAAGATGAAGCAAAAATCAATGTCGGCGCCGCCGTGGTTGGAGCCATTGTTGAACACGGCGTTCTTCTCAATCTGCCACACGCACGGCGAATCCGCTAGGAGTGAGCGGAATATGTACTGTCTTGATTGCCACTGCGACGCATTTTGCTTCTATTGCCGCTCATCTCACCACAAGGATCATCAAGTAATTCAGGTTGGTTCAATCAAATTCTGAATTTGTTTTTAAAATTTCAAGACATGGGTTTTGTTAAGCATTGACTTAGATGAAATGGGTTGGTTTTGGAATTTGGAAATTTGTTTTAGATAAGGAGATCTTCGTATCATGATGTAGTAAGAGTGGCAGATATCGAAGAAGCTTTGGATATAAGTGGCGTTCAAACTTATGTGATTAATAGCGCTAGAGTCATGTTCTTGAACGAGAGGCCTCAACCCAAAGCTGGTAAAGGAGGAGCACATATTTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGATTCTGTTCACTCGGCTGTAAGGTTAGCCACCATTCCCTTTCCTTTTCGATTTCGGGTTGGATCAGATCGAATCATAACACAAACACAATAGATCATAATATAAATCTAAGATCGAAAAGTGGTTTATGACGTTAATTTAGGGAAAAACATGGCGTTTTGTAGCTTGTAGGGATGAACAGAAATGGGGATGCCAGCTTTAGCTTGGAGACGAAGAAAGAAGCAATGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAA

mRNA sequence

AAGATCCAAAAGCAGCGTAAGCGCCAAACTTTGTCATCTCTGTCAAATTCGATCTGACGGCTGTAATGAAGCCTCAGCCACCAAATCCATCTCCACCGTCCATAGGCTCCTGCTTTCCACAACACATTAACCTCGTCTCTTCAGCCTTGGCCTTTTCATTTTCGTTTCAATTCTCAGAAATTGGCATCGGTTTTCTCTCTGAGTTATGATAATAAGGCAAAAGATCACATTTTTTTGGGTACCCATTTGAGAATAAATATGATGAAGCAAAAATCAATGTCGGCGCCGCCGTGGTTGGAGCCATTGTTGAACACGGCGTTCTTCTCAATCTGCCACACGCACGGCGAATCCGCTAGGAGTGAGCGGAATATGTACTGTCTTGATTGCCACTGCGACGCATTTTGCTTCTATTGCCGCTCATCTCACCACAAGGATCATCAAGTAATTCAGATAAGGAGATCTTCGTATCATGATGTAGTAAGAGTGGCAGATATCGAAGAAGCTTTGGATATAAGTGGCGTTCAAACTTATGTGATTAATAGCGCTAGAGTCATGTTCTTGAACGAGAGGCCTCAACCCAAAGCTGGTAAAGGAGGAGCACATATTTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGATTCTGTTCACTCGGCTGTAAGGTTAGCCACCATTCCCTTTCCTTTTCGATTTCGGGGATGAACAGAAATGGGGATGCCAGCTTTAGCTTGGAGACGAAGAAAGAAGCAATGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAA

Coding sequence (CDS)

ATGATGAAGCAAAAATCAATGTCGGCGCCGCCGTGGTTGGAGCCATTGTTGAACACGGCGTTCTTCTCAATCTGCCACACGCACGGCGAATCCGCTAGGAGTGAGCGGAATATGTACTGTCTTGATTGCCACTGCGACGCATTTTGCTTCTATTGCCGCTCATCTCACCACAAGGATCATCAAGTAATTCAGATAAGGAGATCTTCGTATCATGATGTAGTAAGAGTGGCAGATATCGAAGAAGCTTTGGATATAAGTGGCGTTCAAACTTATGTGATTAATAGCGCTAGAGTCATGTTCTTGAACGAGAGGCCTCAACCCAAAGCTGGTAAAGGAGGAGCACATATTTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGATTCTGTTCACTCGGCTGTAAGGTTAGCCACCATTCCCTTTCCTTTTCGATTTCGGGGATGAACAGAAATGGGGATGCCAGCTTTAGCTTGGAGACGAAGAAAGAAGCAATGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAA

Protein sequence

MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFGS
Homology
[Close]
BLAST of CmoCh06G004170 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.3e-29
Identity = 60/128 (46.88%), Postives = 85/128 (66.41%), Query Frame = 0 

Query: 10  PPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIRRSS 69
           P WL+ L    FF  C  H  + ++ERN+ CLDC C + C +C  S H+ H+++Q+RR  
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDC-CTSLCPHCVPS-HRFHRLLQVRRYV 65

Query: 70  YHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFR 129
           YHDVVR+ D+++ +D S VQ Y INSA+V+F+ +RPQ +  KG  + C  C RSL +P+ 
Sbjct: 66  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYI 125

Query: 130 FCSLGCKV 138
            CSLGCKV
Sbjct: 126 HCSLGCKV 131

[Close]
BLAST of CmoCh06G004170 vs. ExPASy TrEMBL
Match: A0A6J1KYH1 (uncharacterized protein LOC111498296 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498296 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 179/190 (94.21%), Postives = 180/190 (94.74%), Query Frame = 0 

Query: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60
           MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH
Sbjct: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGISSRRRK 180
           GRSLLDPFRFCSLGCK         + GMNRNGDASFSLETKKEAMVMERREGISSRRRK
Sbjct: 121 GRSLLDPFRFCSLGCK---------LVGMNRNGDASFSLETKKEAMVMERREGISSRRRK 180

Query: 181 GIPHRAPFGS 191
           GIPHRAPFGS
Sbjct: 181 GIPHRAPFGS 181

[Close]
BLAST of CmoCh06G004170 vs. ExPASy TrEMBL
Match: A0A6J1GGT0 (uncharacterized protein LOC111454064 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454064 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 179/190 (94.21%), Postives = 180/190 (94.74%), Query Frame = 0 

Query: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60
           MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH
Sbjct: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGISSRRRK 180
           GRSLLDPFRFCSLGCK         + GMNRNGDASFSLETKKEAMVMERREGISSRRRK
Sbjct: 121 GRSLLDPFRFCSLGCK---------LVGMNRNGDASFSLETKKEAMVMERREGISSRRRK 180

Query: 181 GIPHRAPFGS 191
           GIPHRAPFGS
Sbjct: 181 GIPHRAPFGS 181

[Close]
BLAST of CmoCh06G004170 vs. ExPASy TrEMBL
Match: A0A6J1CS33 (uncharacterized protein LOC111014242 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.7e-90
Identity = 165/191 (86.39%), Postives = 173/191 (90.58%), Query Frame = 0 

Query: 1   MMKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKD 60
           MMKQKS MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH D
Sbjct: 1   MMKQKSIMSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHND 60

Query: 61  HQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120
           HQVIQIRRSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI
Sbjct: 61  HQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120

Query: 121 CGRSLLDPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGISSRRR 180
           CGRSLLDPFRFCSLGCK         + G+ RNGDA F LE KKEA+VMERREGISSRRR
Sbjct: 121 CGRSLLDPFRFCSLGCK---------LVGVKRNGDARFDLEAKKEALVMERREGISSRRR 180

Query: 181 KGIPHRAPFGS 191
           KGIPHRAPFGS
Sbjct: 181 KGIPHRAPFGS 182

[Close]
BLAST of CmoCh06G004170 vs. ExPASy TrEMBL
Match: A0A6J1CU41 (uncharacterized protein LOC111014242 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.9e-89
Identity = 164/190 (86.32%), Postives = 172/190 (90.53%), Query Frame = 0 

Query: 2   MKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 61
           MKQKS MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH DH
Sbjct: 1   MKQKSIMSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHNDH 60

Query: 62  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 121
           QVIQIRRSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 122 GRSLLDPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGISSRRRK 181
           GRSLLDPFRFCSLGCK         + G+ RNGDA F LE KKEA+VMERREGISSRRRK
Sbjct: 121 GRSLLDPFRFCSLGCK---------LVGVKRNGDARFDLEAKKEALVMERREGISSRRRK 180

Query: 182 GIPHRAPFGS 191
           GIPHRAPFGS
Sbjct: 181 GIPHRAPFGS 181

[Close]
BLAST of CmoCh06G004170 vs. ExPASy TrEMBL
Match: A0A6J1CTQ1 (uncharacterized protein LOC111014242 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.2e-88
Identity = 159/184 (86.41%), Postives = 167/184 (90.76%), Query Frame = 0 

Query: 7   MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIR 66
           MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH DHQVIQIR
Sbjct: 5   MSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHNDHQVIQIR 64

Query: 67  RSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD 126
           RSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD
Sbjct: 65  RSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD 124

Query: 127 PFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRA 186
           PFRFCSLGCK         + G+ RNGDA F LE KKEA+VMERREGISSRRRKGIPHRA
Sbjct: 125 PFRFCSLGCK---------LVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRA 179

Query: 187 PFGS 191
           PFGS
Sbjct: 185 PFGS 179

[Close]
BLAST of CmoCh06G004170 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein )

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-55
Identity = 116/204 (56.86%), Postives = 132/204 (64.71%), Query Frame = 0 

Query: 7   MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIR 66
           M  P WLE LL T FFSIC  H E+ R+E NM+CL C   AFCFYCRSS H DH V+QIR
Sbjct: 1   MEEPKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIR 60

Query: 67  RSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGA---------HIC 126
           RSSYHDVVRV++IE ALDI GVQTYVINSARV+FLNERPQPK    GA         + C
Sbjct: 61  RSSYHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFC 120

Query: 127 EICGRSLLDPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETKKEAMVMERREGI--- 186
           E C R+LLDPFRFCSLGCKV          GM +N       E ++E +  ER++     
Sbjct: 121 ETCCRTLLDPFRFCSLGCKV---------EGMRKN------KEEEEERLRKERQQETHKG 180

Query: 187 --------SSRRRKGIPHRAPFGS 191
                   +SRRRKGIPHRAPF S
Sbjct: 181 THPPTHTSNSRRRKGIPHRAPFAS 189

[Close]
BLAST of CmoCh06G004170 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-49
Identity = 106/208 (50.96%), Postives = 132/208 (63.46%), Query Frame = 0 

Query: 3   KQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQV 62
           ++ + + P WL+PLL   FF  C  H +S +SE NMYCLDC     C  C  S HKDH  
Sbjct: 5   EETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLC-LSFHKDHHA 64

Query: 63  IQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR 122
           IQIRRSSYHDV+RV++I++ LDI+GVQTYVINSA+V+FLNERPQP+ GKG  + CE+C R
Sbjct: 65  IQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYR 124

Query: 123 SLLDPFRFCSLGCKVSHHS------------------LSFSISGMNRNGDA---SFSLET 182
           SL+D FRFCSLGCK+S  S                   S SI  + +N D    SF+  T
Sbjct: 125 SLVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPST 184

Query: 183 KKEAMVMERREGISSRRRKGIPHRAPFG 190
              + V  R     ++RRKGIPHRAPFG
Sbjct: 185 PPLSAVNRR----IAKRRKGIPHRAPFG 207

[Close]
BLAST of CmoCh06G004170 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-47
Identity = 99/195 (50.77%), Postives = 125/195 (64.10%), Query Frame = 0 

Query: 10  PPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIRRSS 69
           PPWL+PLL   FF  C  HG+S +SE NMYCLDC     C  C  +HHKDH+ IQIRRSS
Sbjct: 34  PPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLC-LAHHKDHRTIQIRRSS 93

Query: 70  YHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLL-DPF 129
           YHDV+RV +I++ LDI G+QTYVINSA+V+FLNERPQP+ GKG  + C++C RSL+ D F
Sbjct: 94  YHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRSLVDDSF 153

Query: 130 RFCSLGCKVSHHSLSFSISGMN---RNGDASFSLETKKEAMVMERREGISS--------- 189
           RFCSLGCK++  S  F     N      D+S S+   K    ++     +          
Sbjct: 154 RFCSLGCKIAGTSRGFEKGRENLLMETEDSSSSIAIGKNITNLQSFSPSTPPLTTSSNCR 213

[Close]
BLAST of CmoCh06G004170 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 87/157 (55.41%), Postives = 113/157 (71.97%), Query Frame = 0 

Query: 6   SMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQI 65
           +++ PPWL P+L   +F  C  H  S +SE NM+CLDC  +AFC YC   +H++H+V+QI
Sbjct: 14  NLNPPPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYC-LLNHRNHRVLQI 73

Query: 66  RRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLL 125
           RRSSYH+VVRV +I++ +DIS VQTY+INSAR++FLNERPQP+ GKG  + CEIC RSLL
Sbjct: 74  RRSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLL 133

Query: 126 DPFRFCSLGCKVSHHSLSFSISGMNRNGDASFSLETK 163
           D FRFCSLGCK         + GM R+   +FSL  K
Sbjct: 134 DSFRFCSLGCK---------LGGMKRDPSLTFSLRGK 160

[Close]
BLAST of CmoCh06G004170 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 177.6 bits (449), Expect = 9.7e-45
Identity = 83/151 (54.97%), Postives = 114/151 (75.50%), Query Frame = 0 

Query: 3   KQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQV 62
           +++  ++PPWL P+L  ++F  C  H +S ++E N++CLDC  +AFC YC    HKDH+V
Sbjct: 9   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRV 68

Query: 63  IQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR 122
           +QIRRSSYH+VVRV +I++ +DI+ VQTY+INSA+++FLNERPQP+ GKG  + CEIC R
Sbjct: 69  VQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCR 128

Query: 123 SLLDPFRFCSLGCKV-----SHHSLSFSISG 149
           SLLD FRFCSLGCK+        SL+FS+ G
Sbjct: 129 SLLDSFRFCSLGCKLGGMRRGDLSLTFSLKG 158

The following BLAST results are available for this feature:
BLAST of CmoCh06G004170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1G3Q44.3e-2946.88Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of CmoCh06G004170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KYH11.5e-9894.21uncharacterized protein LOC111498296 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GGT01.5e-9894.21uncharacterized protein LOC111454064 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1CS337.7e-9086.39uncharacterized protein LOC111014242 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CU412.9e-8986.32uncharacterized protein LOC111014242 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CTQ17.2e-8886.41uncharacterized protein LOC111014242 isoform X3 OS=Momordica charantia OX=3673 G... [more]
BLAST of CmoCh06G004170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27930.14.7e-5556.86PLATZ transcription factor family protein [more]
AT1G32700.11.7e-4950.96PLATZ transcription factor family protein [more]
AT4G17900.11.6e-4750.77PLATZ transcription factor family protein [more]
AT1G76590.11.1e-4555.41PLATZ transcription factor family protein [more]
AT1G21000.19.7e-4554.97PLATZ transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006734PLATZ transcription factorPFAMPF04640PLATZcoord: 66..137
e-value: 3.2E-29
score: 101.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..190
NoneNo IPR availablePANTHERPTHR31065:SF43PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 7..178
NoneNo IPR availablePANTHERPTHR31065PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 7..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G004170.1CmoCh06G004170.1mRNA