CmoCh06G003960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G003960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein ZAT5-like
Location	Cmo_Chr06: 1931533 .. 1932225 (+)
RNA-Seq Expression	CmoCh06G003960
Synteny	CmoCh06G003960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAACCCCAGATGAAAATCAAGCCCAATTCATCAAGGGAAAGCGAACCAAACGCACCAGGCCTCCCTCTGTTGCTTCATCTTCCAGCGCTGATTGTTCCAGTTCGTCGGCGGGGCTTACAGAGCAAGAAGAAGAAGATCAAGATTTGGCCAATTGTTTGATTCTTTTGGCGCAGGGGAGAACAGGGGATTGCGCCTCTGTTTTGGTTCAACACAATCAATCTCTGTTTGCTTATCAGTGCAAGACTTGCGATCGTTGTTTTCCTTCTTTTCAAGCCTTGGGTGGACATAGAGCTAGCCATAAGAAACCCAAAATCTCTAATTCTCTTCAAACCCACGACCCTCAATTTCACCTCTCCTTGCAGTTATCCACCGGCCGACCACCGGCCAGTTTCGCCGCCGGTGACCTCGTTAAATCTAAGGTTCATGAGTGTTCCATTTGTGGAGCGGAGTTTTCTTCTGGGCAGGCACTTGGTGGTCATATGAGACGACATAGAGCGTTGACCTCTACGGCGTCGGTGCCGAGTAGAGGTGCTGCTGCTACGCCGCAGTTGCAGGAGTTAATGATTAAGAAAGAGAGAAATGTGTTGGAGTTGGATCTTAACCTTCCGGCGCCTGAGGATGACCGGCACCGGACGGCGGTGTCTGTGTTCTCCGCCGCATCGTCGCTGGTGGATTGTCATTACTGA

mRNA sequence

ATGGCGGAAACCCCAGATGAAAATCAAGCCCAATTCATCAAGGGAAAGCGAACCAAACGCACCAGGCCTCCCTCTGTTGCTTCATCTTCCAGCGCTGATTGTTCCAGTTCGTCGGCGGGGCTTACAGAGCAAGAAGAAGAAGATCAAGATTTGGCCAATTGTTTGATTCTTTTGGCGCAGGGGAGAACAGGGGATTGCGCCTCTGTTTTGGTTCAACACAATCAATCTCTGTTTGCTTATCAGTGCAAGACTTGCGATCGTTGTTTTCCTTCTTTTCAAGCCTTGGGTGGACATAGAGCTAGCCATAAGAAACCCAAAATCTCTAATTCTCTTCAAACCCACGACCCTCAATTTCACCTCTCCTTGCAGTTATCCACCGGCCGACCACCGGCCAGTTTCGCCGCCGGTGACCTCGTTAAATCTAAGGTTCATGAGTGTTCCATTTGTGGAGCGGAGTTTTCTTCTGGGCAGGCACTTGGTGGTCATATGAGACGACATAGAGCGTTGACCTCTACGGCGTCGGTGCCGAGTAGAGGTGCTGCTGCTACGCCGCAGTTGCAGGAGTTAATGATTAAGAAAGAGAGAAATGTGTTGGAGTTGGATCTTAACCTTCCGGCGCCTGAGGATGACCGGCACCGGACGGCGGTGTCTGTGTTCTCCGCCGCATCGTCGCTGGTGGATTGTCATTACTGA

Coding sequence (CDS)

ATGGCGGAAACCCCAGATGAAAATCAAGCCCAATTCATCAAGGGAAAGCGAACCAAACGCACCAGGCCTCCCTCTGTTGCTTCATCTTCCAGCGCTGATTGTTCCAGTTCGTCGGCGGGGCTTACAGAGCAAGAAGAAGAAGATCAAGATTTGGCCAATTGTTTGATTCTTTTGGCGCAGGGGAGAACAGGGGATTGCGCCTCTGTTTTGGTTCAACACAATCAATCTCTGTTTGCTTATCAGTGCAAGACTTGCGATCGTTGTTTTCCTTCTTTTCAAGCCTTGGGTGGACATAGAGCTAGCCATAAGAAACCCAAAATCTCTAATTCTCTTCAAACCCACGACCCTCAATTTCACCTCTCCTTGCAGTTATCCACCGGCCGACCACCGGCCAGTTTCGCCGCCGGTGACCTCGTTAAATCTAAGGTTCATGAGTGTTCCATTTGTGGAGCGGAGTTTTCTTCTGGGCAGGCACTTGGTGGTCATATGAGACGACATAGAGCGTTGACCTCTACGGCGTCGGTGCCGAGTAGAGGTGCTGCTGCTACGCCGCAGTTGCAGGAGTTAATGATTAAGAAAGAGAGAAATGTGTTGGAGTTGGATCTTAACCTTCCGGCGCCTGAGGATGACCGGCACCGGACGGCGGTGTCTGTGTTCTCCGCCGCATCGTCGCTGGTGGATTGTCATTACTGA

Protein sequence

MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQGRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY

Homology

[Close]

BLAST of CmoCh06G003960 vs. ExPASy Swiss-Prot
Match: Q681X4 (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 112/276 (40.58%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 8   NQAQFIKGKRTKRTRPPS---VASSSSADCSSSSAG--------------------LTEQ 67
           +Q Q IKGKRTKR R  S   V ++++   +SSSAG                     T+ 
Sbjct: 11  DQTQIIKGKRTKRQRSSSTFVVTAATTVTSTSSSAGGSGGERAVSDEYNSAVSSPVTTDC 70

Query: 68  EEEDQDLANCLILLAQG---------RTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQAL 127
            +E++D+A CLI+LA+G          +      +   N S + Y+CKTC+R F SFQAL
Sbjct: 71  TQEEEDMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQAL 130

Query: 128 GGHRASHKKPKISNSLQTHDPQFHLSLQLS----------TGRPPASFAAGDLVK-SKVH 187
           GGHRASHKKP+ S   +T  P        S          +G   AS A+  + K +KVH
Sbjct: 131 GGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVH 190

Query: 188 ECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMI--------KKERN 231
           ECSICG+EF+SGQALGGHMRRHR   +T S  +  A  +    E  I        +++R 
Sbjct: 191 ECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRK 250

[Close]

BLAST of CmoCh06G003960 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-20
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 43  EQEEEDQDLANCLILLAQGRTGDCASV-LVQHNQSLFA--YQCKTCDRCFPSFQALGGHR 102
           E+  ++ D+A CL++LAQ  T     + L QH +S  +  ++CKTC++ F SFQALGGHR
Sbjct: 9   EESLKNIDIAKCLMILAQ--TSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHR 68

Query: 103 ASHKKPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQAL 162
           ASHKKPK+  +++  D + HLS               D   +  H+CSIC   F +GQAL
Sbjct: 69  ASHKKPKL--TVEQKDVK-HLS--------------NDYKGNHFHKCSICSQSFGTGQAL 128

Query: 163 GGHMRRHRALTSTASVPSRGAAATPQLQEL-MIKKERNVLELDLNLPAPEDD 211
           GGHMRRHR  +S    PS  +   P +  L      + +L LDLNL   E+D
Sbjct: 129 GGHMRRHR--SSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLEND 159

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BLAST of CmoCh06G003960 vs. ExPASy Swiss-Prot
Match: Q9SSW2 (Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 74/221 (33.48%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 12  FIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQGRTGDCASVLV 71
           ++K KR+KR R  S +SSSS+   S      +   E++ LA CL++LA+ +     +   
Sbjct: 32  WLKRKRSKRQRSHSPSSSSSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQ--TRFH 91

Query: 72  QHNQSL--------FAYQCKTCDRCFPSFQALGGHRASHK-KPKISNSLQTHDPQFHLSL 131
           Q +QSL          Y+C  C++ FPS+QALGGH+ASH+ KP    S    D       
Sbjct: 92  QQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADD------- 151

Query: 132 QLSTGRPPASFAAGD----LVKSKVHECSICGAEFSSGQALGGHMRRHRA--LTSTASVP 191
              +  P  S  AG+        K+HECSIC   F +GQALGGH R H    L       
Sbjct: 152 ---STAPTISIVAGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGG 211

Query: 192 SRGAAATPQLQELMIKKERNVLELDLNLPA-PEDDRHRTAV 217
           S+  + +  +   + ++  +   +DLNLPA PE   H   +
Sbjct: 212 SKSISHSGSVSSTVSEERSHRGFIDLNLPALPELSLHHNPI 240

[Close]

BLAST of CmoCh06G003960 vs. ExPASy Swiss-Prot
Match: Q9SHD0 (Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 70/212 (33.02%), Postives = 102/212 (48.11%), Query Frame = 0


Query: 21  TRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQGR--------------TGDC 80
           T  PS   +     SS+S   TE     +DLA CLI+L++ +                D 
Sbjct: 126 TSQPSELVAEPEHHSSASDTTTE-----EDLAFCLIMLSRDKWKQQKKKKQRVEEDETDH 185

Query: 81  ASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHLSLQLST 140
            S   + ++S   ++C+TC + F S+QALGGHRASHKK K              +    T
Sbjct: 186 DSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNK--------------ACMTKT 245

Query: 141 GRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATP-- 200
            +    +  G + + KVHEC IC   F+SGQALGGH R H +         RG + +   
Sbjct: 246 EQVETEYVLG-VKEKKVHECPICFRVFTSGQALGGHKRSHGSNIGA----GRGLSVSQIV 305

Query: 201 QLQELMIKKERNVLELDLNLPAPEDDRHRTAV 217
           Q++E +  K+R +   DLNLPAP ++   + V
Sbjct: 306 QIEEEVSVKQRMI---DLNLPAPNEEDETSLV 310

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BLAST of CmoCh06G003960 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15
Identity = 62/160 (38.75%), Postives = 75/160 (46.88%), Query Frame = 0


Query: 48  DQDLANCLILLAQGRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKI 107
           D   ANCL+LL++          V        + CKTC + F SFQALGGHRASHKKP  
Sbjct: 12  DVTAANCLMLLSR-----VGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPN- 71

Query: 108 SNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHR 167
                        +  LS+G           VK+  H C ICG EF  GQALGGHMRRHR
Sbjct: 72  -------------NDALSSGLMKK-------VKTSSHPCPICGVEFPMGQALGGHMRRHR 131

Query: 168 ALTSTASVPSRGAAATPQLQELMIKKE---RNVLELDLNL 205
             +  A       A  P+     +KK    + V  LDL+L
Sbjct: 132 NESGAAGGALVTRALLPEPTVTTLKKSSSGKRVACLDLSL 145

[Close]

BLAST of CmoCh06G003960 vs. ExPASy TrEMBL
Match: A0A6J1F8Y7 (zinc finger protein ZAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111443395 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.0e-125
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQ 60
           MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQ
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQ 60

Query: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120
           GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL
Sbjct: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120

Query: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180
           SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA
Sbjct: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180

Query: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 231
           AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY
Sbjct: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 230

[Close]

BLAST of CmoCh06G003960 vs. ExPASy TrEMBL
Match: A0A6J1KUK8 (zinc finger protein ZAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111498808 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 4.9e-123
Identity = 226/230 (98.26%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQ 60
           MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQ
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQ 60

Query: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120
           GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL
Sbjct: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120

Query: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180
           SLQLSTGRPPASFAAGD+VKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASV SRGA
Sbjct: 121 SLQLSTGRPPASFAAGDVVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVASRGA 180

Query: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 231
            ATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAV+VFSAASSLVDCHY
Sbjct: 181 TATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVAVFSAASSLVDCHY 230

[Close]

BLAST of CmoCh06G003960 vs. ExPASy TrEMBL
Match: A0A5D3DNF4 (Zinc finger protein ZAT5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002920 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 8.4e-83
Identity = 180/255 (70.59%), Postives = 194/255 (76.08%), Query Frame = 0


Query: 1   MAETPDENQAQFIKGKRTKRTRPPSVAS-SSSADCSSSSAGLTEQEEEDQDLANCLILLA 60
           MAETPDENQAQ IKGKRTKR RP SV+S SSSADCSSSSAGLTE+EEEDQDLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSVSSTSSSADCSSSSAGLTEEEEEDQDLANCLILLA 60

Query: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPK----- 120
           QGR   T  C+SV V+      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK     
Sbjct: 61  QGRSRITEGCSSVFVEQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNNV 120

Query: 121 ISNSLQTHDPQ----------FHLSLQLST-GRPPASFAAGDLVKSKVHECSICGAEFSS 180
           I+NS++    Q            LSLQLST  RPP    AGDL+KSKVHECSICGAEFSS
Sbjct: 121 IANSVEQQQQQQENNFTTSNSIQLSLQLSTASRPPPPPTAGDLIKSKVHECSICGAEFSS 180

Query: 181 GQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPAPEDDRHRTA 231
           GQALGGHMRRHR LT+T + P     +TPQ     IKKERN+LELDLNLPAPEDDRHR  
Sbjct: 181 GQALGGHMRRHRTLTATTTRPI--TTSTPQ----FIKKERNMLELDLNLPAPEDDRHRPP 240

[Close]

BLAST of CmoCh06G003960 vs. ExPASy TrEMBL
Match: A0A1S3B5W6 (zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103486519 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 8.4e-83
Identity = 180/255 (70.59%), Postives = 194/255 (76.08%), Query Frame = 0


Query: 1   MAETPDENQAQFIKGKRTKRTRPPSVAS-SSSADCSSSSAGLTEQEEEDQDLANCLILLA 60
           MAETPDENQAQ IKGKRTKR RP SV+S SSSADCSSSSAGLTE+EEEDQDLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSVSSTSSSADCSSSSAGLTEEEEEDQDLANCLILLA 60

Query: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPK----- 120
           QGR   T  C+SV V+      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK     
Sbjct: 61  QGRSRITEGCSSVFVEQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNNV 120

Query: 121 ISNSLQTHDPQ----------FHLSLQLST-GRPPASFAAGDLVKSKVHECSICGAEFSS 180
           I+NS++    Q            LSLQLST  RPP    AGDL+KSKVHECSICGAEFSS
Sbjct: 121 IANSVEQQQQQQENNFTTSNSIQLSLQLSTASRPPPPPTAGDLIKSKVHECSICGAEFSS 180

Query: 181 GQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPAPEDDRHRTA 231
           GQALGGHMRRHR LT+T + P     +TPQ     IKKERN+LELDLNLPAPEDDRHR  
Sbjct: 181 GQALGGHMRRHRTLTATTTRPI--TTSTPQ----FIKKERNMLELDLNLPAPEDDRHRPP 240

[Close]

BLAST of CmoCh06G003960 vs. ExPASy TrEMBL
Match: A0A0A0LDR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743410 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 182/264 (68.94%), Postives = 193/264 (73.11%), Query Frame = 0


Query: 1   MAETPDENQAQFIKGKRTKRTRPPSVAS-SSSADCSSSSAGLTEQEEEDQDLANCLILLA 60
           MAETPDENQAQ IKGKRTKR RP SV+S SSSADCSSSSAGLTE+EEEDQDLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSVSSTSSSADCSSSSAGLTEEEEEDQDLANCLILLA 60

Query: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSL 120
           QGR   T  C+SV VQ      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK  N++
Sbjct: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNNI 120

Query: 121 ------QTHDPQ------------------FHLSLQLST-GRPPASFAAGDLVKSKVHEC 180
                 Q H  Q                    LSLQLST  RPP    AGDL+KSKVHEC
Sbjct: 121 TANSVEQQHQQQQQQHHHQLQDNNFTTSNSIQLSLQLSTASRPPPPPTAGDLIKSKVHEC 180

Query: 181 SICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPA 231
           SICGAEFSSGQALGGHMRRHRALT+T + P      TPQ     IKKERN+LELDLNLPA
Sbjct: 181 SICGAEFSSGQALGGHMRRHRALTATTTRP---ITTTPQ----FIKKERNMLELDLNLPA 240

[Close]

BLAST of CmoCh06G003960 vs. TAIR 10
Match: AT2G28200.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 112/276 (40.58%), Postives = 147/276 (53.26%), Query Frame = 0


Query: 8   NQAQFIKGKRTKRTRPPS---VASSSSADCSSSSAG--------------------LTEQ 67
           +Q Q IKGKRTKR R  S   V ++++   +SSSAG                     T+ 
Sbjct: 11  DQTQIIKGKRTKRQRSSSTFVVTAATTVTSTSSSAGGSGGERAVSDEYNSAVSSPVTTDC 70

Query: 68  EEEDQDLANCLILLAQG---------RTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQAL 127
            +E++D+A CLI+LA+G          +      +   N S + Y+CKTC+R F SFQAL
Sbjct: 71  TQEEEDMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQAL 130

Query: 128 GGHRASHKKPKISNSLQTHDPQFHLSLQLS----------TGRPPASFAAGDLVK-SKVH 187
           GGHRASHKKP+ S   +T  P        S          +G   AS A+  + K +KVH
Sbjct: 131 GGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVH 190

Query: 188 ECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMI--------KKERN 231
           ECSICG+EF+SGQALGGHMRRHR   +T S  +  A  +    E  I        +++R 
Sbjct: 191 ECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRK 250

[Close]

BLAST of CmoCh06G003960 vs. TAIR 10
Match: AT5G03510.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 112/283 (39.58%), Postives = 151/283 (53.36%), Query Frame = 0


Query: 13  IKGKRTKRTRPPSV----ASSSSADCSS--SSAGLTEQE-----------EEDQDLANCL 72
           IKGKRTKR R  S     A++ S+ CS   SS  + E+E           +ED+D+ANCL
Sbjct: 18  IKGKRTKRQRSASPLMMNAAAVSSVCSGERSSVEVREEEAAGEVEFQGATDEDEDMANCL 77

Query: 73  ILLAQGRTGDCASVLVQHNQSLF----------------AYQCKTCDRCFPSFQALGGHR 132
           ILL+QG     +   +   +  F                 YQCKTCD+ F SFQALGGHR
Sbjct: 78  ILLSQGHQAKSSDDHLSMQRMGFFSNKKPVASLGLGLDGVYQCKTCDKSFHSFQALGGHR 137

Query: 133 ASHKKPKISNS-----------------LQTHDPQFHLSLQLSTGRPPASFAAGDLVKSK 192
           ASHKKPK+  S                 ++       LSLQ+++       + G     K
Sbjct: 138 ASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLSLQVTS-------SDGSKKPEK 197

Query: 193 VHECSICGAEFSSGQALGGHMRRHRALT----STASVPSRGAAATPQLQELMIKKERNVL 231
            HECSIC AEFSSGQALGGHMRRHR LT    +T+++ +  ++++    E  I + +N L
Sbjct: 198 THECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAISSSSHHHHEESI-RPKNFL 257

[Close]

BLAST of CmoCh06G003960 vs. TAIR 10
Match: AT3G10470.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-33
Identity = 115/328 (35.06%), Postives = 145/328 (44.21%), Query Frame = 0


Query: 16  KRTKRTRPPSVASSSSADCSSSSAGLTE--QEEEDQDLANCLILLAQGRT---------- 75
           K    T    V SSSSA  SS++    +   +EEDQD+ANCLILLAQG +          
Sbjct: 71  KNNNNTLINGVTSSSSASSSSNNNATLKATADEEDQDMANCLILLAQGHSLPHLQPQPHP 130

Query: 76  -GDCASVLVQHNQS----------------------------------LFAYQCKTCDRC 135
                 +++ +  S                                   + YQCKTCDR 
Sbjct: 131 QQQTRQLMMSYQDSGNNNNNAYRSSSRRFLETSSSNGTTTNGGGGRAGYYVYQCKTCDRT 190

Query: 136 FPSFQALGGHRASHKKPKISNSLQT-HDPQ---------FHLSLQLST-----GRPPASF 195
           FPSFQALGGHRASHKKPK +  L + HD +          HL+  L+T         +  
Sbjct: 191 FPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPNNNSNHRSLV 250

Query: 196 AAGDLVKSKVHECSICGAEFSSGQALGGHMRRHR--------ALTSTASVPSRGAAATPQ 231
             G    +KVHEC ICGAEF+SGQALGGHMRRHR        A T+T SV +  A A   
Sbjct: 251 VYGKGSNNKVHECGICGAEFTSGQALGGHMRRHRGAVVAAAAASTATVSVAAIPATANTA 310

[Close]

BLAST of CmoCh06G003960 vs. TAIR 10
Match: AT5G04390.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-32
Identity = 119/358 (33.24%), Postives = 146/358 (40.78%), Query Frame = 0


Query: 3   ETPDENQAQFIKGKRTKRTRPPS------------------------------------- 62
           E   + Q+  +KGKRTKR RP S                                     
Sbjct: 5   EEATKEQSLILKGKRTKRQRPQSPIPFSISPPIVSTPENNMEEEYTDLDSKDNALGNDEG 64

Query: 63  --------VASSSSADCSSSSAGLTE--QEEEDQDLANCLILLAQG-------------- 122
                    +SSSSA  SS +    +  ++EEDQD+ANCLILLAQG              
Sbjct: 65  NHKKDGVITSSSSSASWSSQNNHTLKAAEDEEDQDIANCLILLAQGHSLPHNNHHLPNSN 124

Query: 123 ----------RTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSL 182
                     R  + +S         + YQCKTCDR FPSFQALGGHRASHKKPK ++  
Sbjct: 125 NNNTYRFTSRRFLETSSSNSGGKAGYYVYQCKTCDRTFPSFQALGGHRASHKKPKAASFY 184

Query: 183 QTHDPQ-----------FHLSLQLSTGRPPASFAA-GDLVKSKVHECSICGAEFSSGQAL 231
              D +            H +  +       S    G   K+KVHEC ICGAEF+SGQAL
Sbjct: 185 SNLDLKKNTYANDAVSLVHTTTTVFKNNNSRSLVVYGKASKNKVHECGICGAEFTSGQAL 244

[Close]

BLAST of CmoCh06G003960 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 43  EQEEEDQDLANCLILLAQGRTGDCASV-LVQHNQSLFA--YQCKTCDRCFPSFQALGGHR 102
           E+  ++ D+A CL++LAQ  T     + L QH +S  +  ++CKTC++ F SFQALGGHR
Sbjct: 9   EESLKNIDIAKCLMILAQ--TSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHR 68

Query: 103 ASHKKPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQAL 162
           ASHKKPK+  +++  D + HLS               D   +  H+CSIC   F +GQAL
Sbjct: 69  ASHKKPKL--TVEQKDVK-HLS--------------NDYKGNHFHKCSICSQSFGTGQAL 128

Query: 163 GGHMRRHRALTSTASVPSRGAAATPQLQEL-MIKKERNVLELDLNLPAPEDD 211
           GGHMRRHR  +S    PS  +   P +  L      + +L LDLNL   E+D
Sbjct: 129 GGHMRRHR--SSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLEND 159

The following BLAST results are available for this feature:

BLAST of CmoCh06G003960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681X4	1.9e-39	40.58	Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1	[more]
Q9SLD4	2.0e-20	40.70	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q9SSW2	1.4e-18	33.48	Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1	[more]
Q9SHD0	1.9e-15	33.02	Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1	[more]
Q42410	2.5e-15	38.75	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]

BLAST of CmoCh06G003960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8Y7	4.0e-125	100.00	zinc finger protein ZAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111443395 PE=4...	[more]
A0A6J1KUK8	4.9e-123	98.26	zinc finger protein ZAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111498808 PE=4 S...	[more]
A0A5D3DNF4	8.4e-83	70.59	Zinc finger protein ZAT5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3B5W6	8.4e-83	70.59	zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103486519 PE=4 SV=1	[more]
A0A0A0LDR8	1.1e-82	68.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743410 PE=4 SV=1	[more]

BLAST of CmoCh06G003960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28200.1	1.3e-40	40.58	C2H2-type zinc finger family protein	[more]
AT5G03510.1	1.2e-36	39.58	C2H2-type zinc finger family protein	[more]
AT3G10470.1	4.6e-33	35.06	C2H2-type zinc finger family protein	[more]
AT5G04390.1	1.0e-32	33.24	C2H2-type zinc finger family protein	[more]
AT2G37430.1	1.4e-21	40.70	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 80..102 e-value: 0.077 score: 22.1 coord: 144..166 e-value: 0.01 score: 25.0
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 82..102
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 146..166
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 80..107 score: 9.972048
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 144..171 score: 9.888914
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 143..168 e-value: 3.9E-13 score: 49.0 coord: 79..104 e-value: 7.4E-10 score: 38.6
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 78..166 e-value: 1.8E-9 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..42
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 29..230
None	No IPR available	PANTHER	PTHR26374:SF378	ZINC FINGER PROTEIN ZAT5	coord: 29..230
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 80..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G003960.1	CmoCh06G003960.1	mRNA