CmoCh06G003170 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G003170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr06: 1547398 .. 1550228 (-)
RNA-Seq ExpressionCmoCh06G003170
SyntenyCmoCh06G003170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATCCGCAGAAACTAGTAAGAATCATGAGCTCCTTCAACAACACCGCCAATTTTGATAATCTTCTCCTTCAAACTCTGATGGGCAGGCTCCAAATCCGGCCCCAAAGCAACAACAATCCCCTTCTCGCCCAATCTCTCGAAGACCTTCTCTTCGATGCAGCCAATCTCTCCGATGACGACAACGACGAGAACAAAACGCAGCTCGCCAAAGAGGAATCGATGCTCGAGAAAGAGATTATTCGCGTGATTCTCGGTGGGAATATCGATTCACTAAAACCTAATTCCGGCCAGGCTGTTACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCGGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATTTATGGGAATTACTTTGAAAGGCTTCAGGGGAAGGTCAATCGCGAGTTGAATAAAAAGGAGGCGGCGGAAGAAGAAGAAGAAGATGATGATGATGAAAAAGAGGAGGAGGTCGGCAAATTGGGTCTTCGGGAGTTGATTGACGGTGGTGATTCGAGTGGCGGTCGCATTCTGCATCGCAATGTCAATGCCAGTTCTCAAAGGTTTCGCATGATTTACTTACTGTTTTTCTGTTTCCTTATGAAATTATGTTCTTATGAAATTGAATTGAACACAAAAATTTAACCAAACAGTTTAAGGCATAATCAGGAAGGCTGTTTTCTGGAAGAAAAATTCATTGAAGTAGCCGCTTAGTTTTTACTCTCACATGCCGTTGGTTCATGTTTTTGCTTGATATATGGGTATGATTTTTATTTGTATGCCACTGAGTTATCCTCCCTTTGCCTAGTTCATGGAGTAAATCATTTCTCTCCCAAGTCTTGTAGTTAGTGTGTGTGTAGACATAGGTTCACTGCCTATCATTGGAGAAGACTTTTTTTTATTGATTAGGTAAAAGGACTTATGGATGGACTTAGACATGACTTTATCCCCTTTATTTTTTCGTTTGTTGTCGATGCCTTTGGGGACGGGAGAGTCCCGCAAGACTCTTTTGGAACAATCGGGTGACAGTCACTGTACAAATAGAATCGATGTCTCTATCTTAGAGTAAGCAAGGATAGAAACTTTTAAGGACATCGGGGCATGACTATTTATATTTGGTGGTTGATGGAACTTTAGAAGTGAATATATCGACTAGGAATATTGAAACCTTCGTAGTCACCGGAGTTCAGCTAGGGCATAAACGATAGTTCGACAGAGGAGGTGCTATTGTTGATGGAGTAGAAATTACCATGGCAGAAGCTCAGCCACATGAACCCTCCAATTGTGATGTCATGAATAAACCAGCAAAGGGAGTCTTCTAGTAGATATTGTCCTCTTTGAGCTTTCCCTCGAAGTTTTTAAAACATGTTAGCTAAGAAGAGGTTTCTACACCCTTATAAACAATGTTTCGTTTCCCTTTCCAACCGATGTGGTGTCTCACACTCCACTCTCCTTTGGGTTTTTCCTCTCCACTCGGTGTCCACCCTCCTTCGGGGCTCAACGTCCTCGTTGGCACATCGCTCGATGTTTGGCTCTGATACCATTTGTAACAGCCCAAACCCACCGCTAGCAGATACTGTTCTCTTTGGGCTTCCTCTTTCAGGCTTTCCCTCAAGGTTTTTAAAATGCGTCTGCTAGGGAGAGATTTTCAAACCCTTATAAAAAATGATTCGTTCTACTCTTCAACCGACGTGAGGTTAATGGGTAGATGTTCCTGCAAGCTAAAGTTTGGAACATGCTTTAGTTTCTAGAAAATTTATATAAGACAAAAGGAAGTCTCTTTGATGCAGTCGCTCATAATTGGTTGTGTGTGTTTTTGTTTCTGAGAGGCCATATGTGAAGGTTGAATTGATTGTTGCTTGGAGTTTTAAATGTTATTTCTTATCCTTAGTAATCTCTTGGGATTTCCTCCCCTCGTTTGGCTTGGATTTTAAGGATGACTCAAATCCCATTGCTGCTGGATAGATCACTTTTATCACTTGGTTGGATTTCCTTATAAGGGCGTGAAACCTCTCTCTAGCATATGTGTTTTAAAAACTGAGAGGAAGCCCGAAAGAGAAAGTCCAAAAAGGACCATATCTGCTAGTGATAGACTTAAGATTTTACAAATGGTATCAGAGTCAAACACCGGGCGGTGTGCCAGCGAGGATGTTGGCCCCCAAGGGGGGTGGATTATGAGATCCCAAAGAGGAACAAAACATTCCTTCTAAGAGTGTGAAAACCTCTCCCTAGCAGGCGCATTTTAAAAACCTTGAGGAGAAACCCGAAATGGGAAGTCCAAAGAGGACAACATCTGCTAGCGGTGGGCTTAGGCCTAGGCCGTTACTCTTTCATTGTTAACTTTGTTGAATTCTTATCTCTCTGACAATTTGGTTGAATTCTTATCAATGATAATCTACTTCTTGAAGATGATTAGTTTTCATTCTAACACGATGTTGCTCGTACACTTACTCCATTTCATTATATATTTTGCCATTAGGTTTTAGTCAGCTGAGTTGCGGTCTTTCGATCAGAGCTAGTTCGGATGCCGAAGAACGCTGATAACAACGCTGATAACGATCATCATTTTACAGATTGCACCTGGGTGTTTCTGCAGTCAGGACACCAAACTTTTTGTGTAAGTTGGACAGTAAATGAAAAGAGATGAATACATAGATTCAGTGACATTGGCTTTGTTTGATCGGTTTCTTCTCCATCCTTTTGAATAATTAATTACTTTTTGCTCTCTTCAGTTCACTTCTGTGTTGTGTATTTGTTCTTCATCTCTGC

mRNA sequence

TCCATCCGCAGAAACTAGTAAGAATCATGAGCTCCTTCAACAACACCGCCAATTTTGATAATCTTCTCCTTCAAACTCTGATGGGCAGGCTCCAAATCCGGCCCCAAAGCAACAACAATCCCCTTCTCGCCCAATCTCTCGAAGACCTTCTCTTCGATGCAGCCAATCTCTCCGATGACGACAACGACGAGAACAAAACGCAGCTCGCCAAAGAGGAATCGATGCTCGAGAAAGAGATTATTCGCGTGATTCTCGGTGGGAATATCGATTCACTAAAACCTAATTCCGGCCAGGCTGTTACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCGGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATTTATGGGAATTACTTTGAAAGGCTTCAGGGGAAGGTCAATCGCGAGTTGAATAAAAAGGAGGCGGCGGAAGAAGAAGAAGAAGATGATGATGATGAAAAAGAGGAGGAGGTCGGCAAATTGGGTCTTCGGGAGTTGATTGACGGTGGTGATTCGAGTGGCGGTCGCATTCTGCATCGCAATGTCAATGCCAGTTCTCAAAGGTTTTAGTCAGCTGAGTTGCGGTCTTTCGATCAGAGCTAGTTCGGATGCCGAAGAACGCTGATAACAACGCTGATAACGATCATCATTTTACAGATTGCACCTGGGTGTTTCTGCAGTCAGGACACCAAACTTTTTGTGTAAGTTGGACAGTAAATGAAAAGAGATGAATACATAGATTCAGTGACATTGGCTTTGTTTGATCGGTTTCTTCTCCATCCTTTTGAATAATTAATTACTTTTTGCTCTCTTCAGTTCACTTCTGTGTTGTGTATTTGTTCTTCATCTCTGC

Coding sequence (CDS)

ATGAGCTCCTTCAACAACACCGCCAATTTTGATAATCTTCTCCTTCAAACTCTGATGGGCAGGCTCCAAATCCGGCCCCAAAGCAACAACAATCCCCTTCTCGCCCAATCTCTCGAAGACCTTCTCTTCGATGCAGCCAATCTCTCCGATGACGACAACGACGAGAACAAAACGCAGCTCGCCAAAGAGGAATCGATGCTCGAGAAAGAGATTATTCGCGTGATTCTCGGTGGGAATATCGATTCACTAAAACCTAATTCCGGCCAGGCTGTTACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCGGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATTTATGGGAATTACTTTGAAAGGCTTCAGGGGAAGGTCAATCGCGAGTTGAATAAAAAGGAGGCGGCGGAAGAAGAAGAAGAAGATGATGATGATGAAAAAGAGGAGGAGGTCGGCAAATTGGGTCTTCGGGAGTTGATTGACGGTGGTGATTCGAGTGGCGGTCGCATTCTGCATCGCAATGTCAATGCCAGTTCTCAAAGGTTTTAG

Protein sequence

MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQLAKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELIDGGDSSGGRILHRNVNASSQRF
Homology
BLAST of CmoCh06G003170 vs. ExPASy TrEMBL
Match: A0A6J1F855 (uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC111441746 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.8e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60
           MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL
Sbjct: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELID 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELID
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELID 180

Query: 181 GGDSSGGRILHRNVNASSQRF 202
           GGDSSGGRILHRNVNASSQRF
Sbjct: 181 GGDSSGGRILHRNVNASSQRF 201

BLAST of CmoCh06G003170 vs. ExPASy TrEMBL
Match: A0A6J1KW97 (uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.6e-101
Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 0

Query: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60
           MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNP+LAQSLEDLLFDAANLSDDDNDENKTQL
Sbjct: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPILAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEESMLEKEIIRVILGGN DSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELID 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELNKKE AEEEEE+DDDEKEE + KLGLRELID
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKKE-AEEEEEEDDDEKEENLSKLGLRELID 180

Query: 181 GGDSSGGRILHRNVNASSQRF 202
           GGDSSGGRILHRNVNASSQRF
Sbjct: 181 GGDSSGGRILHRNVNASSQRF 200

BLAST of CmoCh06G003170 vs. ExPASy TrEMBL
Match: A0A6J1CVB7 (uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015123 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.7e-95
Identity = 184/206 (89.32%), Postives = 194/206 (94.17%), Query Frame = 0

Query: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60
           MSSF+NTANFDNLLLQTLMGRLQIRP +NNNPLL+QSLEDLLFDAANLSDDDND+NKTQL
Sbjct: 1   MSSFSNTANFDNLLLQTLMGRLQIRPPNNNNPLLSQSLEDLLFDAANLSDDDNDDNKTQL 60

Query: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEES LEKEIIRVIL GN DSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESKLEKEIIRVILTGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK-----EAAEEEEEDDDDEKEEEVGKLGL 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELNK+     +  EEE E++DDEK+E+VGKLGL
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKRKEEQEQEEEEEGEEEDDEKDEKVGKLGL 180

Query: 181 RELIDGGDSSGGRILHRNVNASSQRF 202
           RELIDGGDSSGGRILHRNVNASSQRF
Sbjct: 181 RELIDGGDSSGGRILHRNVNASSQRF 206

BLAST of CmoCh06G003170 vs. ExPASy TrEMBL
Match: A0A6J1J2Z9 (uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 171/202 (84.65%), Postives = 187/202 (92.57%), Query Frame = 0

Query: 1   MSSFNNTANFDNLLLQTLMGRLQIR-PQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQ 60
           M+SFNNTANFDNLLLQTLMGRLQIR P SNNNPL++QSLEDLLFD ANLSDDDNDENKTQ
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRHPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQ 60

Query: 61  LAKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHI 120
           LAKEES LEKEIIR+IL GN DSLKPNSGQAVTIGEHHICVGFHEEKDS YRVWEWHGHI
Sbjct: 61  LAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHI 120

Query: 121 MLFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELI 180
           MLFDEENGY+PEYIYGNYFE LQGK  REL+K +  EEE +++++E+EE+VG+LGLRELI
Sbjct: 121 MLFDEENGYTPEYIYGNYFENLQGKFYRELHKPK--EEEVKENEEEEEEKVGELGLRELI 180

Query: 181 DGGDSSGGRILHRNVNASSQRF 202
           +GGDSS GRILHRNVNASSQRF
Sbjct: 181 NGGDSSAGRILHRNVNASSQRF 200

BLAST of CmoCh06G003170 vs. ExPASy TrEMBL
Match: A0A6J1F6Q3 (uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC111441374 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.2e-86
Identity = 173/205 (84.39%), Postives = 185/205 (90.24%), Query Frame = 0

Query: 1   MSSFNNTANFDNLLLQTLMGRLQIR-PQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQ 60
           M+SFNNTANFDNLLLQTLMGRLQIR P SNNNPL++QSLEDLLFD ANLSDDDNDENKTQ
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQ 60

Query: 61  LAKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHI 120
           LAKEES LEKEIIR+IL GN DSLKPNSGQAVTIGEHHICVGFHEE DS YRVWEWHGHI
Sbjct: 61  LAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEE-DSGYRVWEWHGHI 120

Query: 121 MLFDEENGYSPEYIYGNYFERLQGKVNRELNK---KEAAEEEEEDDDDEKEEEVGKLGLR 180
           MLFDEENGY+PEYIYGNYFE L GKV REL+K   +E  E EEE+D +E EE+VG+LGLR
Sbjct: 121 MLFDEENGYTPEYIYGNYFENLLGKVYRELHKLKEEEEKENEEEEDGNEDEEKVGELGLR 180

Query: 181 ELIDGGDSSGGRILHRNVNASSQRF 202
           ELI+GGDSS GRILHRNVNASSQRF
Sbjct: 181 ELINGGDSSAGRILHRNVNASSQRF 204

BLAST of CmoCh06G003170 vs. TAIR 10
Match: AT3G53630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-64
Identity = 131/203 (64.53%), Postives = 157/203 (77.34%), Query Frame = 0

Query: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60
           MSSFN  +N DNLL+QTL+GRLQIRP   N+  L+QSL+DLLF + +   DD+ E +T L
Sbjct: 1   MSSFNGNSNIDNLLIQTLLGRLQIRPP--NSHFLSQSLDDLLFKSDDSDGDDDGEGQTSL 60

Query: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
            +EE+ LEKE+IRVI+ G  DSLKPNSGQAVT+ EHHICVGFHE+++SDYRVWEWHGHIM
Sbjct: 61  DREEARLEKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKV--NRELNKKEAAEEEEEDDDDEKEEEVGKLGLREL 180
           LFDEENGY+PEYIYGNYFERL  K+  NR +        E+E   + KEEEV  LGLREL
Sbjct: 121 LFDEENGYTPEYIYGNYFERLPVKLPNNRRV--------EKEKKKEMKEEEVENLGLREL 180

Query: 181 IDGGDSSGGRILHR-NVNASSQR 201
           IDGGD++ GRILHR N+N  S R
Sbjct: 181 IDGGDAAPGRILHRNNINIGSSR 193

BLAST of CmoCh06G003170 vs. TAIR 10
Match: AT4G18692.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 134 YGNYFERLQGKV--NRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELIDGGDSSGGRILH 193
           +GNYFERL  K+  NR +        E+E   + KEEEV   GLRELIDGGD++ GRILH
Sbjct: 4   FGNYFERLPVKLPNNRHV--------EKEKKKEVKEEEVENWGLRELIDGGDAAPGRILH 63

Query: 194 R-NVNASSQRF 202
           R N+N  S RF
Sbjct: 64  RNNINIGSSRF 66

BLAST of CmoCh06G003170 vs. TAIR 10
Match: AT3G53342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 0

Query: 134 YGNYFERLQGKV--NRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELIDGGDSSGGRILH 193
           +GNYFERL  K+  NR +        E+E   + KEEEV   GLRELIDGGD + GRILH
Sbjct: 4   FGNYFERLPVKLPNNRHV--------EKEKKKEVKEEEVENWGLRELIDGGDVAPGRILH 63

Query: 194 R-NVNASSQRF 202
           R N+N  S RF
Sbjct: 64  RNNINIGSSRF 66

BLAST of CmoCh06G003170 vs. TAIR 10
Match: AT1G55710.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 0

Query: 134 YGNYFERLQGKV--NRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELIDGGDSSGGRILH 193
           + NYFERL  K+  NR +        E+E   + KEE+V   GLRELIDGG  + GRILH
Sbjct: 4   FRNYFERLPVKLPNNRHV--------EKEKKKEVKEEDVENWGLRELIDGGAVAPGRILH 63

Query: 194 R-NVNASSQRF 202
           R N+N  S RF
Sbjct: 64  RNNINIGSSRF 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F8552.8e-106100.00uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC1114417... [more]
A0A6J1KW971.6e-10196.52uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761... [more]
A0A6J1CVB71.7e-9589.32uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1J2Z92.9e-8784.65uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390... [more]
A0A6J1F6Q34.2e-8684.39uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC1114413... [more]
Match NameE-valueIdentityDescription
AT3G53630.11.5e-6464.53unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G18692.17.7e-0853.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G53342.11.7e-0753.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G55710.12.7e-0549.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..201
NoneNo IPR availablePANTHERPTHR35286EXPRESSED PROTEINcoord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G003170.1CmoCh06G003170.1mRNA