CmoCh06G002680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G002680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	rop guanine nucleotide exchange factor 7-like
Location	Cmo_Chr06: 1359250 .. 1360399 (+)
RNA-Seq Expression	CmoCh06G002680
Synteny	CmoCh06G002680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAAATAGGCTCTTCATGAGTTGAAGCAAGTTTTAATAATCATTTCATCCTCCACTACACGCATATAAACTACAAACTTATCATGCTTCTTCTTCTAACTTCCCCCAAATGGACTTGATTTTCACCCACCAAGAAGAGAGACAACCTGTTCCAATTACCAATCATTCGCTTAACCGCAGTGGCTCCGATCGTTTCAACCCATTCTTAACTCTGAGCTGCTGGGTTTCCAAATCTTCTCAAAAACTGCGTCATAGAGCTCGATTTTCGACTGGGTTTTGCTGCGGAGGGATGGAGTATAAGGGAATGGTGGTGAATAACTCTACGTTTTGTTCTTCCCCTGTTTTTCTTGAAGAAGTTGCGATCGAAACTGGAGAGAAATGCGATGGGTTTGGTGATGCACGTAAGGTGTTTGATGAAAAGACTGGGGTTGGGGAAAGTAGTTTAAGTGATTCCAGTTCTGATTTGTTGTCATCGGAAGCAACAGGGCATGAAGGGCAGAGCCATGAGGAAGAGTCATCGTCGTCTTCTTCGTCGACTTTAATGGGGTGGCCGCTTCACCGGACGGCGGCTGAAGAGCGCAATTTTGACGGCCGACAACTGGAAACACAAGTGTCACCAGTGTCAGGTATGTCTCTATTTACATCCAAATTTACAAGTAGTAAAACATTTGAAAAAACTTGTAATTGTGGGAAAATAAGAAGCAAAAGATGAATTTTGTTGAATTTGATGTGTTGTGGGGTTGCAGAGACAGAGATGATGAAGGAGAGGTTTGCAAAGCTGCTACTGGGAGAAGACATGTCAGGGTGTGGCAATGGAGTCTCTACTGCTTTGGCCATATCTAATGCCATCACCAATCTCTGTGGTATGCCCTCTCTTCACAAATTTTCATTACTTTTATACAAAGCTCTCATGCTTTGGTCCTCCAACATGAACTTGCAGCCACTCTATTCGGACAACTATGGAGATTACAACCTTTAGCCTCTCACATAAAAGCAATGTGGCAAAGAGAAATGGAATTGCTGCTCTCTGTTACCAACCACATCGTCCAACTGATACCCGTTTCCCAAACATTCCCAGATGGAACCAAACTCGAGGTCCAAATTCAATACACATTTCTTAATCATCTCTTTTCCCAAATCCCATCATGA

mRNA sequence

GGAGAAATAGGCTCTTCATGAGTTGAAGCAAGTTTTAATAATCATTTCATCCTCCACTACACGCATATAAACTACAAACTTATCATGCTTCTTCTTCTAACTTCCCCCAAATGGACTTGATTTTCACCCACCAAGAAGAGAGACAACCTGTTCCAATTACCAATCATTCGCTTAACCGCAGTGGCTCCGATCGTTTCAACCCATTCTTAACTCTGAGCTGCTGGGTTTCCAAATCTTCTCAAAAACTGCGTCATAGAGCTCGATTTTCGACTGGGTTTTGCTGCGGAGGGATGGAGTATAAGGGAATGGTGGTGAATAACTCTACGTTTTGTTCTTCCCCTGTTTTTCTTGAAGAAGTTGCGATCGAAACTGGAGAGAAATGCGATGGGTTTGGTGATGCACGTAAGGTGTTTGATGAAAAGACTGGGGTTGGGGAAAGTAGTTTAAGTGATTCCAGTTCTGATTTGTTGTCATCGGAAGCAACAGGGCATGAAGGGCAGAGCCATGAGGAAGAGTCATCGTCGTCTTCTTCGTCGACTTTAATGGGGTGGCCGCTTCACCGGACGGCGGCTGAAGAGCGCAATTTTGACGGCCGACAACTGGAAACACAAGTGTCACCAGTGTCAGAGACAGAGATGATGAAGGAGAGGTTTGCAAAGCTGCTACTGGGAGAAGACATGTCAGGGTGTGGCAATGGAGTCTCTACTGCTTTGGCCATATCTAATGCCATCACCAATCTCTGTGCCACTCTATTCGGACAACTATGGAGATTACAACCTTTAGCCTCTCACATAAAAGCAATGTGGCAAAGAGAAATGGAATTGCTGCTCTCTGTTACCAACCACATCGTCCAACTGATACCCGTTTCCCAAACATTCCCAGATGGAACCAAACTCGAGGTCCAAATTCAATACACATTTCTTAATCATCTCTTTTCCCAAATCCCATCATGA

Coding sequence (CDS)

ATGGACTTGATTTTCACCCACCAAGAAGAGAGACAACCTGTTCCAATTACCAATCATTCGCTTAACCGCAGTGGCTCCGATCGTTTCAACCCATTCTTAACTCTGAGCTGCTGGGTTTCCAAATCTTCTCAAAAACTGCGTCATAGAGCTCGATTTTCGACTGGGTTTTGCTGCGGAGGGATGGAGTATAAGGGAATGGTGGTGAATAACTCTACGTTTTGTTCTTCCCCTGTTTTTCTTGAAGAAGTTGCGATCGAAACTGGAGAGAAATGCGATGGGTTTGGTGATGCACGTAAGGTGTTTGATGAAAAGACTGGGGTTGGGGAAAGTAGTTTAAGTGATTCCAGTTCTGATTTGTTGTCATCGGAAGCAACAGGGCATGAAGGGCAGAGCCATGAGGAAGAGTCATCGTCGTCTTCTTCGTCGACTTTAATGGGGTGGCCGCTTCACCGGACGGCGGCTGAAGAGCGCAATTTTGACGGCCGACAACTGGAAACACAAGTGTCACCAGTGTCAGAGACAGAGATGATGAAGGAGAGGTTTGCAAAGCTGCTACTGGGAGAAGACATGTCAGGGTGTGGCAATGGAGTCTCTACTGCTTTGGCCATATCTAATGCCATCACCAATCTCTGTGCCACTCTATTCGGACAACTATGGAGATTACAACCTTTAGCCTCTCACATAAAAGCAATGTGGCAAAGAGAAATGGAATTGCTGCTCTCTGTTACCAACCACATCGTCCAACTGATACCCGTTTCCCAAACATTCCCAGATGGAACCAAACTCGAGGTCCAAATTCAATACACATTTCTTAATCATCTCTTTTCCCAAATCCCATCATGA

Protein sequence

MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGGMEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLLSSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEVQIQYTFLNHLFSQIPS

Homology

[Close]

BLAST of CmoCh06G002680 vs. ExPASy Swiss-Prot
Match: F4K295 (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.1e-36
Identity = 89/178 (50.00%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 110 SSLSDSSSDLL--SSEATGHEGQSHEEESSSSSSST--------LMGWPL-----HRTAA 169
           S+L+ S  D+L  S E +   G S+E  S+++ +S+        ++GWP+      + + 
Sbjct: 16  SNLTPSMEDILTESKERSSTSGASYESSSTTTVASSSPPPPPSQILGWPIRKASFRKNSK 75

Query: 170 EERNFDGRQL--------ETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNA 229
           E  NFD ++L        + +    ++ EMMKERFAKLLLGEDMSG G GV TALAISNA
Sbjct: 76  ESVNFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNA 135

Query: 230 ITNLCATLFGQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           ITNLCAT+FGQLWRL+PL+S  K MW+REME +LSV++HIV+L P +QT+PDG K EV
Sbjct: 136 ITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEV 193

[Close]

BLAST of CmoCh06G002680 vs. ExPASy Swiss-Prot
Match: Q9LZN0 (Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF7 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.1e-36
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 117 SDLLSSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQV-SPVSETE 176
           S   SSE T  E    EEE S S +      P+  +    +N DG + + +  S VSE E
Sbjct: 18  SSCCSSETTRQE----EEEQSPSCTEDFTASPV-SSRWSVKNIDGEKKKIRSDSRVSEVE 77

Query: 177 MMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQRE 236
           MMKERF+KLLLGEDMSG GNGV TALAISNAITNLCATLFGQLWRL+PL +  K MW+RE
Sbjct: 78  MMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRLEPLPTEKKEMWRRE 137

Query: 237 MELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           ME LL V++HIV++ P  QTFPDGTKLE+
Sbjct: 138 MEWLLCVSDHIVEMTPTWQTFPDGTKLEI 161

[Close]

BLAST of CmoCh06G002680 vs. ExPASy Swiss-Prot
Match: Q9M056 (Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF6 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-30
Identity = 81/169 (47.93%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 109 ESSLSDSSSDLLSSEATGHEGQSHEEESSSSSSSTLMGWPL-------------HRTAAE 168
           +SSLS SSS + SS  +G    +    SS  + S ++GWPL              +T  +
Sbjct: 35  DSSLSSSSSGVGSS--SGRSSVAERSVSSPPTKSQILGWPLGQGSWRKSSGKMKKKTPTK 94

Query: 169 ERNFDGRQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLF 228
             +F  +++ T+    SE E++KER AKLLLGEDMSG G GV  ALAISNAITNL A + 
Sbjct: 95  IDDFGFKRVGTE---TSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAITNLYAAIL 154

Query: 229 GQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           GQ WRL+P+ S  K MW+RE+E+LLSV++HIV+L+P  Q FP+G K+EV
Sbjct: 155 GQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIEV 198

[Close]

BLAST of CmoCh06G002680 vs. ExPASy Swiss-Prot
Match: Q93ZY2 (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 87/182 (47.80%), Postives = 107/182 (58.79%), Query Frame = 0


Query: 111 SLSDSSSDLLSSEATGHEGQS---HEEESSSS----------SSSTLMGWP--------- 170
           SLS    D +SSE  G    S    E ESSSS          +SS++   P         
Sbjct: 3   SLSSEEDDEVSSERCGSYSPSADISESESSSSFSCHRFDGEGASSSIPSSPRVVAGRGFY 62

Query: 171 ------LHRTAAEERNFDGRQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALA 230
                 L     ++  +D +Q +   + +SE EMMKERFAKLLLGEDMSG G GV TALA
Sbjct: 63  FPAPVMLPVIGGKDVVWDDKQPD---NDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALA 122

Query: 231 ISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKL 265
           ISNAITNL AT+FG+LWRL+PLA   KAMW+RE+E LL V++ IV+LIP  Q FP G   
Sbjct: 123 ISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTY 181

[Close]

BLAST of CmoCh06G002680 vs. ExPASy Swiss-Prot
Match: A4IJ27 (Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF3 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.7e-24
Identity = 68/149 (45.64%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 122 SEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQ----VSPVSETEM- 181
           SE T       +E +S  S ++   WP+   +   +   G ++++     V  +SE E+ 
Sbjct: 47  SETTSGFSDQIDETNSFCSEASPCNWPVLTESKSSKCLSGLEMQSNECLVVQEISEPELE 106

Query: 182 -MKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQRE 241
            MKERFAKLLLGEDMSG G GV TA+ ISNAITNL AT+FGQ  RL+PL +  +A+W+RE
Sbjct: 107 TMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKRE 166

Query: 242 MELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           M  LLSV ++IV+ IP  Q   +G  +EV
Sbjct: 167 MNCLLSVCDYIVEFIPRCQNLSNGATVEV 195

[Close]

BLAST of CmoCh06G002680 vs. ExPASy TrEMBL
Match: A0A6J1FND9 (rop guanine nucleotide exchange factor 7-like OS=Cucurbita moschata OX=3662 GN=LOC111447031 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.5e-145
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60
           MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG
Sbjct: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120

Query: 121 SSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKER 180
           SSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKER
Sbjct: 121 SSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKER 180

Query: 181 FAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELLL 240
           FAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELLL
Sbjct: 181 FAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELLL 240

Query: 241 SVTNHIVQLIPVSQTFPDGTKLEV 265
           SVTNHIVQLIPVSQTFPDGTKLE+
Sbjct: 241 SVTNHIVQLIPVSQTFPDGTKLEI 264

[Close]

BLAST of CmoCh06G002680 vs. ExPASy TrEMBL
Match: A0A6J1I2R8 (rop guanine nucleotide exchange factor 7-like OS=Cucurbita maxima OX=3661 GN=LOC111470019 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135
Identity = 250/266 (93.98%), Postives = 256/266 (96.24%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60
           MDLIFTHQEER+PVPITNHSLNR  SDRFNPFLTLS WVSKS+QKLRHRARFSTGFCCGG
Sbjct: 1   MDLIFTHQEEREPVPITNHSLNRISSDRFNPFLTLSYWVSKSAQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDA KVFDEK+GVGESSLSDSS DLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDALKVFDEKSGVGESSLSDSSPDLL 120

Query: 121 SSEATGHEGQSHEEE--SSSSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMK 180
           SSEATGHEGQSHEEE  SSSSSSSTLMGWPLHRTAAEERNFD RQLETQVSPVSETEMMK
Sbjct: 121 SSEATGHEGQSHEEEPSSSSSSSSTLMGWPLHRTAAEERNFDDRQLETQVSPVSETEMMK 180

Query: 181 ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMEL 240
           ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCA+LFGQLWRLQPLA H KAMWQREMEL
Sbjct: 181 ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCASLFGQLWRLQPLAPHKKAMWQREMEL 240

Query: 241 LLSVTNHIVQLIPVSQTFPDGTKLEV 265
           LLSVTNHIVQLIP+SQTFPDGTKLE+
Sbjct: 241 LLSVTNHIVQLIPISQTFPDGTKLEI 266

[Close]

BLAST of CmoCh06G002680 vs. ExPASy TrEMBL
Match: A0A6J1CV30 (rop guanine nucleotide exchange factor 7-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015048 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.3e-82
Identity = 189/300 (63.00%), Postives = 216/300 (72.00%), Query Frame = 0


Query: 1   MDLIFTHQE-ERQPVPITNHSL-----NRSGSDRFNPFLTLSCWVSKSSQKLRHRARFST 60
           MD+ F HQE ER P+   NHSL     N    D  NPF  L  WV KS++K+     F +
Sbjct: 1   MDVNFAHQEQERVPIRFRNHSLKLCLPNLVNHDCSNPFSILRRWVWKSARKV-----FPS 60

Query: 61  GFCCGGMEYKGMVVNNSTFCSSPVFLEEVAIE--------TGEKCDGFGDARKVFDEKTG 120
           GFCC G+EYKGMVVNNSTFCSSP FLEEVA+E          EKCD FG+A KVFDEK G
Sbjct: 61  GFCCRGLEYKGMVVNNSTFCSSPAFLEEVAMEIRVEDKEGKEEKCDMFGNAHKVFDEKRG 120

Query: 121 VGESSLSDSSSDLLSSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEE-----RNFDG 180
            GES+ S SSSDLL+SEATG    SH+EE   SSSSTLMGWPL++T  EE      +FD 
Sbjct: 121 DGESA-SSSSSDLLTSEATG----SHDEE---SSSSTLMGWPLNQTVGEEGGGDKLHFDD 180

Query: 181 RQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRL 240
           R+LE + S VSE E+M ERF+KLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRL
Sbjct: 181 RELEREASSVSEMEIM-ERFSKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRL 240

Query: 241 QPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEVQI---QYTFLNHLFSQI 279
           +PLA+  K MW+REME LL V+NHIV+LIPV QTFPDG+KLEVQ    +Y F   L  Q+
Sbjct: 241 EPLAAERKGMWRREMEWLLCVSNHIVELIPVWQTFPDGSKLEVQFKISKYLFTKFLSLQL 286

[Close]

BLAST of CmoCh06G002680 vs. ExPASy TrEMBL
Match: A0A6J1CWY5 (rop guanine nucleotide exchange factor 7-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015048 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 3.3e-81
Identity = 183/283 (64.66%), Postives = 209/283 (73.85%), Query Frame = 0


Query: 1   MDLIFTHQE-ERQPVPITNHSL-----NRSGSDRFNPFLTLSCWVSKSSQKLRHRARFST 60
           MD+ F HQE ER P+   NHSL     N    D  NPF  L  WV KS++K+     F +
Sbjct: 1   MDVNFAHQEQERVPIRFRNHSLKLCLPNLVNHDCSNPFSILRRWVWKSARKV-----FPS 60

Query: 61  GFCCGGMEYKGMVVNNSTFCSSPVFLEEVAIE--------TGEKCDGFGDARKVFDEKTG 120
           GFCC G+EYKGMVVNNSTFCSSP FLEEVA+E          EKCD FG+A KVFDEK G
Sbjct: 61  GFCCRGLEYKGMVVNNSTFCSSPAFLEEVAMEIRVEDKEGKEEKCDMFGNAHKVFDEKRG 120

Query: 121 VGESSLSDSSSDLLSSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEE-----RNFDG 180
            GES+ S SSSDLL+SEATG    SH+EE   SSSSTLMGWPL++T  EE      +FD 
Sbjct: 121 DGESA-SSSSSDLLTSEATG----SHDEE---SSSSTLMGWPLNQTVGEEGGGDKLHFDD 180

Query: 181 RQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRL 240
           R+LE + S VSE E+M ERF+KLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRL
Sbjct: 181 RELEREASSVSEMEIM-ERFSKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRL 240

Query: 241 QPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           +PLA+  K MW+REME LL V+NHIV+LIPV QTFPDG+KLE+
Sbjct: 241 EPLAAERKGMWRREMEWLLCVSNHIVELIPVWQTFPDGSKLEI 269

[Close]

BLAST of CmoCh06G002680 vs. ExPASy TrEMBL
Match: A0A5A7TMM7 (Rop guanine nucleotide exchange factor 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004810 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.7e-74
Identity = 171/279 (61.29%), Postives = 197/279 (70.61%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60
           MDL FTHQ+  +P+P+TNHS   + SD FNPF  L  WVSKS++KL HRAR STGFCC G
Sbjct: 1   MDLTFTHQQHIEPIPLTNHS--PTPSDCFNPFSNLGNWVSKSARKLCHRARSSTGFCCRG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEEVAIE---TGEKCDGFGDARKVFDEKTGVGESSLSDSSS 120
           +EY+GMVVNNS       FLE VA+E     EKCD F +ARKV DEKT       S+SSS
Sbjct: 61  LEYRGMVVNNS------AFLEVVAMEIEAKEEKCDVFENARKVSDEKTA------SNSSS 120

Query: 121 DLLSSEATG--HEGQSHEEESSSSSSST----------LMGWPLHRTAAEERNFDGRQLE 180
           DLL S  T    E  S +EESSSSSSS+           MGWPLH+   E    DG  +E
Sbjct: 121 DLLKSVETEEVEEQSSKDEESSSSSSSSSSSSSSTSAASMGWPLHKRVGEGEE-DG--VE 180

Query: 181 TQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLA 240
            +VS  SE EMMKERF+KLLLGEDMSG GNGV TALAISNAITNLC ++FGQLWRL+PL 
Sbjct: 181 KEVSTDSEMEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCGSVFGQLWRLEPLE 240

Query: 241 SHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           +  KAMW REME LL V+NHIV+LIP+ QTFPDGTKLE+
Sbjct: 241 AERKAMWGREMEFLLCVSNHIVELIPIWQTFPDGTKLEI 262

[Close]

BLAST of CmoCh06G002680 vs. TAIR 10
Match: AT5G02010.1 (RHO guanyl-nucleotide exchange factor 7 )

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-37
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 117 SDLLSSEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQV-SPVSETE 176
           S   SSE T  E    EEE S S +      P+  +    +N DG + + +  S VSE E
Sbjct: 18  SSCCSSETTRQE----EEEQSPSCTEDFTASPV-SSRWSVKNIDGEKKKIRSDSRVSEVE 77

Query: 177 MMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQRE 236
           MMKERF+KLLLGEDMSG GNGV TALAISNAITNLCATLFGQLWRL+PL +  K MW+RE
Sbjct: 78  MMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRLEPLPTEKKEMWRRE 137

Query: 237 MELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           ME LL V++HIV++ P  QTFPDGTKLE+
Sbjct: 138 MEWLLCVSDHIVEMTPTWQTFPDGTKLEI 161

[Close]

BLAST of CmoCh06G002680 vs. TAIR 10
Match: AT5G05940.1 (ROP guanine nucleotide exchange factor 5 )

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-37
Identity = 89/178 (50.00%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 110 SSLSDSSSDLL--SSEATGHEGQSHEEESSSSSSST--------LMGWPL-----HRTAA 169
           S+L+ S  D+L  S E +   G S+E  S+++ +S+        ++GWP+      + + 
Sbjct: 16  SNLTPSMEDILTESKERSSTSGASYESSSTTTVASSSPPPPPSQILGWPIRKASFRKNSK 75

Query: 170 EERNFDGRQL--------ETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNA 229
           E  NFD ++L        + +    ++ EMMKERFAKLLLGEDMSG G GV TALAISNA
Sbjct: 76  ESVNFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNA 135

Query: 230 ITNLCATLFGQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           ITNLCAT+FGQLWRL+PL+S  K MW+REME +LSV++HIV+L P +QT+PDG K EV
Sbjct: 136 ITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEV 193

[Close]

BLAST of CmoCh06G002680 vs. TAIR 10
Match: AT3G55660.1 (ROP (rho of plants) guanine nucleotide exchange factor 6 )

HSP 1 Score: 133.3 bits (334), Expect = 3.1e-31
Identity = 81/169 (47.93%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 109 ESSLSDSSSDLLSSEATGHEGQSHEEESSSSSSSTLMGWPL-------------HRTAAE 168
           +SSLS SSS + SS  +G    +    SS  + S ++GWPL              +T  +
Sbjct: 35  DSSLSSSSSGVGSS--SGRSSVAERSVSSPPTKSQILGWPLGQGSWRKSSGKMKKKTPTK 94

Query: 169 ERNFDGRQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLF 228
             +F  +++ T+    SE E++KER AKLLLGEDMSG G GV  ALAISNAITNL A + 
Sbjct: 95  IDDFGFKRVGTE---TSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAITNLYAAIL 154

Query: 229 GQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           GQ WRL+P+ S  K MW+RE+E+LLSV++HIV+L+P  Q FP+G K+EV
Sbjct: 155 GQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIEV 198

[Close]

BLAST of CmoCh06G002680 vs. TAIR 10
Match: AT4G38430.1 (rho guanyl-nucleotide exchange factor 1 )

HSP 1 Score: 121.7 bits (304), Expect = 9.3e-28
Identity = 87/182 (47.80%), Postives = 107/182 (58.79%), Query Frame = 0


Query: 111 SLSDSSSDLLSSEATGHEGQS---HEEESSSS----------SSSTLMGWP--------- 170
           SLS    D +SSE  G    S    E ESSSS          +SS++   P         
Sbjct: 3   SLSSEEDDEVSSERCGSYSPSADISESESSSSFSCHRFDGEGASSSIPSSPRVVAGRGFY 62

Query: 171 ------LHRTAAEERNFDGRQLETQVSPVSETEMMKERFAKLLLGEDMSGCGNGVSTALA 230
                 L     ++  +D +Q +   + +SE EMMKERFAKLLLGEDMSG G GV TALA
Sbjct: 63  FPAPVMLPVIGGKDVVWDDKQPD---NDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALA 122

Query: 231 ISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELLLSVTNHIVQLIPVSQTFPDGTKL 265
           ISNAITNL AT+FG+LWRL+PLA   KAMW+RE+E LL V++ IV+LIP  Q FP G   
Sbjct: 123 ISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTY 181

[Close]

BLAST of CmoCh06G002680 vs. TAIR 10
Match: AT4G00460.1 (RHO guanyl-nucleotide exchange factor 3 )

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-25
Identity = 68/149 (45.64%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 122 SEATGHEGQSHEEESSSSSSSTLMGWPLHRTAAEERNFDGRQLETQ----VSPVSETEM- 181
           SE T       +E +S  S ++   WP+   +   +   G ++++     V  +SE E+ 
Sbjct: 47  SETTSGFSDQIDETNSFCSEASPCNWPVLTESKSSKCLSGLEMQSNECLVVQEISEPELE 106

Query: 182 -MKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQRE 241
            MKERFAKLLLGEDMSG G GV TA+ ISNAITNL AT+FGQ  RL+PL +  +A+W+RE
Sbjct: 107 TMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKRE 166

Query: 242 MELLLSVTNHIVQLIPVSQTFPDGTKLEV 265
           M  LLSV ++IV+ IP  Q   +G  +EV
Sbjct: 167 MNCLLSVCDYIVEFIPRCQNLSNGATVEV 195

The following BLAST results are available for this feature:

BLAST of CmoCh06G002680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K295	9.1e-36	50.00	Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
Q9LZN0	9.1e-36	59.73	Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
Q9M056	4.4e-30	47.93	Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
Q93ZY2	1.3e-26	47.80	Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
A4IJ27	4.7e-24	45.64	Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]

BLAST of CmoCh06G002680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FND9	5.5e-145	99.62	rop guanine nucleotide exchange factor 7-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I2R8	1.8e-135	93.98	rop guanine nucleotide exchange factor 7-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CV30	2.3e-82	63.00	rop guanine nucleotide exchange factor 7-like isoform X1 OS=Momordica charantia ...	[more]
A0A6J1CWY5	3.3e-81	64.66	rop guanine nucleotide exchange factor 7-like isoform X2 OS=Momordica charantia ...	[more]
A0A5A7TMM7	8.7e-74	61.29	Rop guanine nucleotide exchange factor 7-like OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of CmoCh06G002680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02010.1	6.4e-37	59.73	RHO guanyl-nucleotide exchange factor 7	[more]
AT5G05940.1	6.4e-37	50.00	ROP guanine nucleotide exchange factor 5	[more]
AT3G55660.1	3.1e-31	47.93	ROP (rho of plants) guanine nucleotide exchange factor 6	[more]
AT4G38430.1	9.3e-28	47.80	rho guanyl-nucleotide exchange factor 1	[more]
AT4G00460.1	3.3e-25	45.64	RHO guanyl-nucleotide exchange factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005512	PRONE domain	PFAM	PF03759	PRONE	coord: 172..266 e-value: 3.6E-45 score: 154.4
IPR005512	PRONE domain	PROSITE	PS51334	PRONE	coord: 164..280 score: 32.784752
None	No IPR available	GENE3D	1.20.58.2010	PRONE domain, subdomain 1	coord: 165..279 e-value: 1.6E-48 score: 166.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..126
None	No IPR available	PANTHER	PTHR33101:SF1	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5	coord: 113..265
IPR038937	Rop guanine nucleotide exchange factor	PANTHER	PTHR33101	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	coord: 113..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G002680.1	CmoCh06G002680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity