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CmoCh06G002330 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCTATTTCAATTTTGACCATGAATGTGGAAACCTCTTGTTGTCATTGGAGGAATTTGAAGCTCCAATTGGGTTGTTGCTGTAAGGCTTGGTGACCTGCTGTAACTTTCTTGATCCTTCAGTCATGGGCAAAGCTTCAAGAGATAAGAGGGTCTTGACTACAATTCAATTCGGCTATTTGTCCTTTTGGTTCATTACCTTTTTCCACGTTTTATTATTTACTTCGTCTCGTTTGCAGAATATATACTATAGTAAAGCAAAAGAAGAAGGCTGGCGTGCTCGAAGTGCGTTCAAACTTCTGAACATAGATGAAGAATTTAACATATTTGAAGGTTTGTTCTTGTATTGGGTTCCTCTTTCTTAAAATATTTTTACCTTTCTGCCAGGATGTCAATCACTGAGATGGTCCAGATGAATGGTAATTGGTACTAAATATTCCTTTCCAAGAATACTAATTTCCTTTGTTTTTTAGGAGTTCTATGTCCTGGAGATGTCATTATTCCCTCGTGAACAATGCCGCAATATTTTGGATTAACCTTCCATAACAGAATAGTTTTCCAGAATCCTCTAGAAATCTGTGTGATCTATTTAGTTTTGCAATCTACCTGTGTTATCTTGTTCATGAACTTTCAATTGCAGGAGTCAAGCGAGTGGTGAATTTATGCGCAGCCCCTGGTAGCTGGAGCTAGGTAATCTCTTTTGGGTGTCTTCTTGTTGCAATCTGTTTATCAAACTAGTGGACAATGCTTTATGGGGGAAATACAATTTTTCATATAAAATACAACTAATTCTTACAAGAATTCTGCAATATGAATCTCTCTTCTCATCTAGTTTCTTTTTTTCTTAGTCAGTCAAGTTGAAAGGTTTGCTGTGATCTCCTCTGTTCCTTGAGATTATTGCTTTGACGTGTCGATTATTTTTTACATGTTTAGCATTGGTAAAACTTGTCAAGTATGATAACGAATTACGCGAGGACCATAATCAAAGCTAGGTTTCTGTTGTTTTACATTTTCGAGTTTTTTTTTTTTTTTTTTGTTGCAGCTGAAGTTGCTTTTCCCGTAGTGACTTTTGCAAAACCGAAAGGCAGTCGCAATCCCAGTATAGGTAACCTTTTGGCTTCACTTTTTTTTATTGGTAACTCTATAGGTCTATCTTTCGGTTATAATTGAACTTATTTCCTGAAAATGATACCCTTCTAAGTGAAAATTGTCATTATAGCGTCTGGTTCATAGGATTCTTACGCATGGATTTCAGATCCCATTGAACTTTAGATTGTTATCGTTTAATACTAGGTGGGACTCGTGTCCACCCAACACCAAATTGTGGGGTTTGCTTATGTTCGTGGTGGCATCTGTAATATGAAAAAAAAAACATGTAAAAGAGGACAAGATAGTCAAAAGGCAGCTCACATATTTTCTAAAACTTCGATGGTTATGTTTATGAACATTAAAAGGTTTTGAATTACAACCGTGAATTGTTCTATTTGATTCTAGGTAGTCGGTCGTTTAATACCATTGCTCAAATGTTGAGGTGTCAGGCTGATTAGACTATAACTAGTTACAACTTACAAGTGATTATTTGGCATCATTTAACTTTTAAACAAAGTAGTGACTATGATTTAACTTTATGTTCATGTTGAAGCTCATACGAGGACTGGGTGTGAATGTTGAGGCATTTGTAGTTTGTGAGAATTATTCGCCTCCTGACGGTTTCAACCCATAAGATCCAACCCCTGCTAGAAAAGGTGGGAAGCCCATCAGGAGGAGATGACTTAGGTAAACTCGATGTACGACCTTGATTGGGAGTTCACATATCGAAGGACCTGATACAACATGTTCTTGATCTTTAAAGATTAATATGTTTTACAGCTGGCTATGACCATGTCTTCTTGTCTTTAAACTTTATATAATTAGTGTCTCTGATTTCAATGTGATCAATTCCCTGGTATTTTTGGTTACACAAGAGGAAGTAATAGCATTGCTATTTTGCTGCATTGTGTCCCTCTCAGATTAAAGTATACATCCCAATAAAGTATCCCCTCAGCGGATATGATTCCGATCGTTCATACCCACTGCCCAGAGGTGCCGAGAGAACTTTGATCCTGTGCGACCTCCTATTGCCCCTCCTTACAACAGGGCTCTTGAAATGAAGAAAACCTTCCAGTGAAGGAATTCGAGAACTAAACCTTCCTTGGATTCCGGATTGTGCTATTCAATGTTGGATAACCTGCAAAGTTGATTTGGATGGACGGGTAATTATTAAGAAACAGCAATCATTTCTCCCTCCCCCCTCTCAGTCTCTGTCCTATTTTTGTAAAAAAAAAAAAAAAAAAAAAAATGCTGTGGATCTTGATTTTGATTATTTTAATCGAAATACATAAAGATTAAGAAGATGTATTATGATAAGCACGAGATTGTCCCGCACGAGTCTTACTCATCCTTCATAATTTCCATGGACATGAACCCCACCCCCATGCATACCACAAACAAAAACAAGAAAGGAAAATCATTTTGAGCATTACACATTTTTTAAGGGCATTCTACTGCATGTCGGTCTGCATGTTTCTATGTTTTTCATATGCAAATGTTTGGACAAACTTGGGTTTTACAGGTGGCCCCCCTGATTGTGAATCAACCAACCATCCTTGCTAATGGGAATCTGAGCTATTCAAAGGCGTGGCCCTCCAAATTCACAGGTCTAACTCATCCCTTTCTAACTGTTGCCTTCTAAAAATTTATGACCCGACATATCACGCATAGAGATTCTTGTTGTCTATCCCATTCCCTCCTTTTGGAGATGCCATAATTTAGGCGTTTAATGGTGGACATCATTGAACAAAAATAACTCAGTGAAATAAACTTATATGTTCTTTTTTTTTTTACCTCATCGAGTGATATATTGTAGATATCCAATTTATGTAATTTTATAATGAACAGATATCTGCTCGAGTTCAAGGCATTTAGACAAGGAAAGTTTCGAGCTTCGAAGATTGAAACTCGATTATCATCTGCTACAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAA ATGCTCTATTTCAATTTTGACCATGAATGTGGAAACCTCTTGTTGTCATTGGAGGAATTTGAAGCTCCAATTGGGTTGTTGCTGTAAGGCTTGGTGACCTGCTGTAACTTTCTTGATCCTTCAGTCATGGGCAAAGCTTCAAGAGATAAGAGGAATATATACTATAGTAAAGCAAAAGAAGAAGGCTGGCGTGCTCGAAGTGCGTTCAAACTTCTGAACATAGATGAAGAATTTAACATATTTGAAGGAGTCAAGCGAGTGGTGAATTTATGCGCAGCCCCTGCTGAAGTTGCTTTTCCCGTAGTGACTTTTGCAAAACCGAAAGGCAGTCGCAATCCCAGTATAGCTCATACGAGGACTGGTGAAGGAATTCGAGAACTAAACCTTCCTTGGATTCCGGATTGTGCTATTCAATGTTGGATAACCTGCAAAGTTGATTTGGATGGACGGGTGGCCCCCCTGATTGTGAATCAACCAACCATCCTTGCTAATGGGAATCTGAGCTATTCAAAGGCGTGGCCCTCCAAATTCACAGATATCTGCTCGAGTTCAAGGCATTTAGACAAGGAAAGTTTCGAGCTTCGAAGATTGAAACTCGATTATCATCTGCTACAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAA ATGGGCAAAGCTTCAAGAGATAAGAGGAATATATACTATAGTAAAGCAAAAGAAGAAGGCTGGCGTGCTCGAAGTGCGTTCAAACTTCTGAACATAGATGAAGAATTTAACATATTTGAAGGAGTCAAGCGAGTGGTGAATTTATGCGCAGCCCCTGCTGAAGTTGCTTTTCCCGTAGTGACTTTTGCAAAACCGAAAGGCAGTCGCAATCCCAGTATAGCTCATACGAGGACTGGTGAAGGAATTCGAGAACTAAACCTTCCTTGGATTCCGGATTGTGCTATTCAATGTTGGATAACCTGCAAAGTTGATTTGGATGGACGGGTGGCCCCCCTGATTGTGAATCAACCAACCATCCTTGCTAATGGGAATCTGAGCTATTCAAAGGCGTGGCCCTCCAAATTCACAGATATCTGCTCGAGTTCAAGGCATTTAGACAAGGAAAGTTTCGAGCTTCGAAGATTGAAACTCGATTATCATCTGCTACAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAA MGKASRDKRNIYYSKAKEEGWRARSAFKLLNIDEEFNIFEGVKRVVNLCAAPAEVAFPVVTFAKPKGSRNPSIAHTRTGEGIRELNLPWIPDCAIQCWITCKVDLDGRVAPLIVNQPTILANGNLSYSKAWPSKFTDICSSSRHLDKESFELRRLKLDYHLLQHHLTETGTQKNV Homology
BLAST of CmoCh06G002330 vs. ExPASy Swiss-Prot
Match: Q54VA8 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=fsjA PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18 Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy Swiss-Prot
Match: O36015 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4F10.03c PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15 Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy Swiss-Prot
Match: Q9VEP1 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 1 OS=Drosophila melanogaster OX=7227 GN=CG5220 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 9.4e-15 Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy Swiss-Prot
Match: Q9UET6 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapiens OX=9606 GN=FTSJ1 PE=1 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14 Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy Swiss-Prot
Match: Q22031 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=R74.7 PE=3 SV=3) HSP 1 Score: 80.1 bits (196), Expect = 2.7e-14 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy TrEMBL
Match: A0A6J1GES5 (putative tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453504 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 3.5e-20 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy TrEMBL
Match: A0A067EPX4 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Citrus sinensis OX=2711 GN=CISIN_1g021155mg PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy TrEMBL
Match: A0A1U7WEB4 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Nicotiana sylvestris OX=4096 GN=LOC104222937 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 9.4e-18 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy TrEMBL
Match: A0A6I9T3P2 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Sesamum indicum OX=4182 GN=LOC105161552 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 9.4e-18 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of CmoCh06G002330 vs. ExPASy TrEMBL
Match: A0A2P5YEP2 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Gossypium barbadense OX=3634 GN=ES319_A09G173400v1 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 9.4e-18 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of CmoCh06G002330 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of CmoCh06G002330 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of CmoCh06G002330 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein ) HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05 Identity = 21/53 (39.62%), Postives = 36/53 (67.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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