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CmoCh06G002320 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATCGTGGTTTCTTTTGGCGTCGGAGTCGAAGTTTTCTTTCCTGACAAGAAAACCCCTAAACAAAATCCTTCATTTCTAACTCGGTTTTGCTTTGGCACAGAAGCGCCAATTCGATTGAACTCGGATACACTGCAAGAATTCCGCCATGGATGTGATCAAGACGCAGCAAATTTCATCGAGGCCAGTCGAGAAGGTTGTAGTCCACCCCCTGGTTTTACTCAGCATCGTTGATAACTACAACCGAGTCGCCAAGGAATCCCGTAAACGAGTTGTAGGAGTCCTACTTGGTAGCTCTTTCAAGGGCACCGTCGATGTCAGTAATAGCTATGCAGGTCTGTATTCGTCTCTCTTTCCGACATCTCTTTAGCGCTTGTCAAAAATATTGCTGTAGCGTGTTTGGATCTGGATGTTCTAGTCGCTTGATTCGGTTTAATACCTGAAAGTGGATGCTGGTTGATTTTTATGATAACATTACGAAGAATCTGGGCATTTTGTTGGGTATTTCTCTGAAATTGATGTTAGCTGAACAGAAGTTGGAATTTGCTTTAGAGACTGGAAATGTACCTTTCTTGTGGTTGCCCTGATTCGCGAAATAGACATGAAAAGAAGCCATCTTTTCGCTTTGGCTGCCCTGATTCGCAAATTCTCCTAGGTTGCTTCTCATTAGGAATTGATTAGGATTCGGGCACTCATTTGCCCGCCTTTTCCACTTTTCATGATTTGTATGACACTAGAAGTTCTTTGGGTAACCTATACTCGGTTGACCCATGTAGACGCCTCGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACACGGGAGCTGGCGAGCTCCCGAAGCCCCGATGAACGGCGGCTTGGATTGCAGGTTTGGATTTGACAGTAAAAAATTTCAACCCTTAAGACACTCGTTGTGTTAAAACTTTCTCTTATCCATCTGACATGAGATTGTTAGGACTTTTCGGATGAGCCGTTACTAATTTTAGGTAGAGTTTTTATTTCTCTCCGTTTTAGAGTTTTGTTGTTTCCCATACATTGTTAATAGTCTACTCAGTATGAGTCTAGTAGGGCGGTTATTGTTGTGAAGGGCAGTCTGCAAGTTTTCTATCTTTGAACTACATCAATTGGTCTTGATCTATGTTTAGTTGTGACCTTTGTATGGTATACTCTCTTTATTTCAGTGCCCTTTGAAGAAGACGAGAAAGATCCGAGCATATGGTTTCTTGACCACAACTATCACGAGTCGATGTTTTCAATGTTCAAGAGGATCAATGGTAATTTCTCTACTTCTAGTACCTTTTGTATTTTTCTATGTTGAGGATTGTTTGCTTATATCATCCATCATTTGTGGACGTGTCAGCTAAGGAGCACATCGTAGGTTGGTATAGCACAGGTCCAAAGCTACGGGAAAATGACCTAGATATTCACCAGTTGTTCCACAAGTAAGATCTCCGTACTTGTTTGGGATTGAGTTTCATAAAATTTTATTTTCAAGTTCTCAAATTCTGTATAGCTTCAAACTATTCTGTTTGTCCTCTGTGTTCATTTTATCTAATTTTCTGAGCTACTTTACTTGTGTAATTTTGTAACACCAATTTAGACCCTTTTGAAAGCCATTCTATGGTCAGTCAATGATGAATATTGTATCCTTTTGGCCAATGTTGTTTTTCTGATTACTCTGCGAGTCATTCACACGCTCTTTTGTGTTTTTTTAGTTATGTACCGAATCCTGTGCTTGTGATTATTGATGTACAACCCAAGGAGCTGGGAATACCTACTAAAGCCTACTATGATGTTGAAGAAGTTAAAGAAGTACGGTTTTATCTCTTTTTTCCAATATTAGCTTAATGGTCCTGAATTAACTATAAAAACGATTTTCTAGTTGCCCTTACATATCTTCTAATTTGGGATGACAGAATGCTACCCAAAAAAGCCAGAAGATCTTTGTTCATGTACCTTCAGTTATTGCTGCCCACGAGGTCGAGGAAATTGGTGAGTTATAAAATGAGATTCATATCTTCGTTTTAGGATGTTTTATCAGTTCTTACCTCGTAACCTTGTTGTTTGGTCTAAATACAGGTGTGGAGCACTTACTAAGGGATGTGAAGGATACTACCATTAGTACACTTGCTAATGAGGTCTATTTTCTTACTGTTACTTCTCTTAAAATTGCAGTGCTCTTCAATCAGTTTTCTTTTATTCAAATCACCTTCCCGAATTTTGTGATTGACTCGATGTACCGAGCTCGACGTCTAGATGGAAGCATTAGGTTACAAAAGGCTTTGGCTTATATAAATGTTTTTTTTTATAGGTTACAGGCAAACTTACTGCTTTAAAAGGTTTAGATGCACGACTACGTGAGATTCGGGGCTACCTCGATCTTGTTATTGATGAGAAGCTTCCATTAAACCATGAGATTCTTTACCATTTACAGGTATCATTTTCTCCTCGCTTCTTCCATTAGCTTTTTAACCATCTCACTGCATTGTATAGATGTACCTATGTATGCGTGTGTATAATAGTATGTATTTGATGATGTGCTTTCTGCACTAGCTCTCCAATCCAAATGACAAATATTCCGCAACTCCAAACACGTTTTCCATTGTTTATGTGGCATGCCTTGGTTCTGAGTACACGTGTCGTGCTAATCTGATTCCCAGCTAGGTGACATTGCTTGTAGTTTTGCTACTCAAAAAGACACACTGTTAATAAAGGAAGAAACAGTTCTTAAGAAAATTCTTATGAACAAGAACAGTTTATAGGGTTTCACACCAACTAGATCTATACCGATATTTTTATTTTCATGATAAAATTGCAGGATGTGTTCAACCTTCTTCCCAATCTAAATGTGGCAGAATTGATAAAATCATTTGCAGGTAAACACTAACTCAAGATTCTTCTCCATTGGCTATTTAACATGTTTCCTTGAGAATATTCATCTATATTTACCCTACTGTGCAGTAAAAACCAATGATATGATGCTGGTTATTTATCTTTCCTCACTCATCCGGAGTGTCATTGCTCTACATAATTTAATCAACAACAAGGTAAAATCCCTCCCTCTGCACCAAATTTACGCCCGCATATTATACATATCAATGAGCTTATAATCATTCATTGCTCTCGTGCAAAATCTGTTCTCTAGATGCTAAACAAAGAACACGAGAAGGCCGAGGACGCAAAACCAGCAATTGTTCCCGCCGTGTCTGGAAACTAACATGCAACTTCCATCGACAAATCTGTTGTTTTAGAAGTTGAAGGAACTAGTTATCTGTGTTGAGTTGTTGGTAGATGACATCTTTGTTTTATCCTATTGGAAGAGATGGCTAGTTTCGGAGCATGTATTTTCCTGACCATTTTTGTGTTCAATGTTAATTGTACACCCTCAGTTTATTTGCTCAAACATGTTGTCACGTAGACCACTCATTTATCTTTTTCTCAGAAGGTTCCTCCAATCTGTAGCATTGTTGATGTCTTATATAAAAGGAAATTTGATGTCGGGATGAATGAAAAGATGGATGGATGGAATCCTAT AAAAATCGTGGTTTCTTTTGGCGTCGGAGTCGAAGTTTTCTTTCCTGACAAGAAAACCCCTAAACAAAATCCTTCATTTCTAACTCGGTTTTGCTTTGGCACAGAAGCGCCAATTCGATTGAACTCGGATACACTGCAAGAATTCCGCCATGGATGTGATCAAGACGCAGCAAATTTCATCGAGGCCAGTCGAGAAGGTTGTAGTCCACCCCCTGGTTTTACTCAGCATCGTTGATAACTACAACCGAGTCGCCAAGGAATCCCGTAAACGAGTTGTAGGAGTCCTACTTGGTAGCTCTTTCAAGGGCACCGTCGATGTCAGTAATAGCTATGCAGTGCCCTTTGAAGAAGACGAGAAAGATCCGAGCATATGGTTTCTTGACCACAACTATCACGAGTCGATGTTTTCAATGTTCAAGAGGATCAATGCTAAGGAGCACATCGTAGGTTGGTATAGCACAGGTCCAAAGCTACGGGAAAATGACCTAGATATTCACCAGTTGTTCCACAATTATGTACCGAATCCTGTGCTTGTGATTATTGATGTACAACCCAAGGAGCTGGGAATACCTACTAAAGCCTACTATGATGTTGAAGAAGTTAAAGAAAATGCTACCCAAAAAAGCCAGAAGATCTTTGTTCATGTACCTTCAGTTATTGCTGCCCACGAGGTCGAGGAAATTGGTGTGGAGCACTTACTAAGGGATGTGAAGGATACTACCATTAGTACACTTGCTAATGAGGTTACAGGCAAACTTACTGCTTTAAAAGGTTTAGATGCACGACTACGTGAGATTCGGGGCTACCTCGATCTTGTTATTGATGAGAAGCTTCCATTAAACCATGAGATTCTTTACCATTTACAGGATGTGTTCAACCTTCTTCCCAATCTAAATGTGGCAGAATTGATAAAATCATTTGCAGTAAAAACCAATGATATGATGCTGGTTATTTATCTTTCCTCACTCATCCGGAGTGTCATTGCTCTACATAATTTAATCAACAACAAGATGCTAAACAAAGAACACGAGAAGGCCGAGGACGCAAAACCAGCAATTGTTCCCGCCGTGTCTGGAAACTAACATGCAACTTCCATCGACAAATCTGTTGTTTTAGAAGTTGAAGGAACTAGTTATCTGTGTTGAGTTGTTGGTAGATGACATCTTTGTTTTATCCTATTGGAAGAGATGGCTAGTTTCGGAGCATGTATTTTCCTGACCATTTTTGTGTTCAATGTTAATTGTACACCCTCAGTTTATTTGCTCAAACATGTTGTCACGTAGACCACTCATTTATCTTTTTCTCAGAAGGTTCCTCCAATCTGTAGCATTGTTGATGTCTTATATAAAAGGAAATTTGATGTCGGGATGAATGAAAAGATGGATGGATGGAATCCTAT ATGGATGTGATCAAGACGCAGCAAATTTCATCGAGGCCAGTCGAGAAGGTTGTAGTCCACCCCCTGGTTTTACTCAGCATCGTTGATAACTACAACCGAGTCGCCAAGGAATCCCGTAAACGAGTTGTAGGAGTCCTACTTGGTAGCTCTTTCAAGGGCACCGTCGATGTCAGTAATAGCTATGCAGTGCCCTTTGAAGAAGACGAGAAAGATCCGAGCATATGGTTTCTTGACCACAACTATCACGAGTCGATGTTTTCAATGTTCAAGAGGATCAATGCTAAGGAGCACATCGTAGGTTGGTATAGCACAGGTCCAAAGCTACGGGAAAATGACCTAGATATTCACCAGTTGTTCCACAATTATGTACCGAATCCTGTGCTTGTGATTATTGATGTACAACCCAAGGAGCTGGGAATACCTACTAAAGCCTACTATGATGTTGAAGAAGTTAAAGAAAATGCTACCCAAAAAAGCCAGAAGATCTTTGTTCATGTACCTTCAGTTATTGCTGCCCACGAGGTCGAGGAAATTGGTGTGGAGCACTTACTAAGGGATGTGAAGGATACTACCATTAGTACACTTGCTAATGAGGTTACAGGCAAACTTACTGCTTTAAAAGGTTTAGATGCACGACTACGTGAGATTCGGGGCTACCTCGATCTTGTTATTGATGAGAAGCTTCCATTAAACCATGAGATTCTTTACCATTTACAGGATGTGTTCAACCTTCTTCCCAATCTAAATGTGGCAGAATTGATAAAATCATTTGCAGTAAAAACCAATGATATGATGCTGGTTATTTATCTTTCCTCACTCATCCGGAGTGTCATTGCTCTACATAATTTAATCAACAACAAGATGCTAAACAAAGAACACGAGAAGGCCGAGGACGCAAAACCAGCAATTGTTCCCGCCGTGTCTGGAAACTAA MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVAKESRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDEKDPSIWFLDHNYHESMFSMFKRINAKEHIVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKIFVHVPSVIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKSFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAKPAIVPAVSGN Homology
BLAST of CmoCh06G002320 vs. ExPASy Swiss-Prot
Match: O24412 (26S proteasome non-ATPase regulatory subunit 7 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN8A PE=1 SV=1) HSP 1 Score: 537.7 bits (1384), Expect = 8.5e-152 Identity = 271/308 (87.99%), Postives = 290/308 (94.16%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy Swiss-Prot
Match: Q9C774 (26S proteasome non-ATPase regulatory subunit 7 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPN8B PE=1 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 2.7e-150 Identity = 268/308 (87.01%), Postives = 291/308 (94.48%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy Swiss-Prot
Match: Q3ZBD0 (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus OX=9913 GN=PSMD7 PE=2 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 7.1e-98 Identity = 176/285 (61.75%), Postives = 233/285 (81.75%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy Swiss-Prot
Match: P51665 (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens OX=9606 GN=PSMD7 PE=1 SV=2) HSP 1 Score: 356.3 bits (913), Expect = 3.5e-97 Identity = 175/285 (61.40%), Postives = 232/285 (81.40%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy Swiss-Prot
Match: P26516 (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmd7 PE=1 SV=2) HSP 1 Score: 355.9 bits (912), Expect = 4.6e-97 Identity = 175/285 (61.40%), Postives = 231/285 (81.05%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy TrEMBL
Match: A0A6J1GEN5 (26S proteasome non-ATPase regulatory subunit 7 homolog A OS=Cucurbita moschata OX=3662 GN=LOC111453487 PE=3 SV=1) HSP 1 Score: 604.7 bits (1558), Expect = 2.1e-169 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy TrEMBL
Match: A0A6J1I6S7 (26S proteasome non-ATPase regulatory subunit 7 homolog A OS=Cucurbita maxima OX=3661 GN=LOC111470142 PE=3 SV=1) HSP 1 Score: 602.8 bits (1553), Expect = 7.9e-169 Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy TrEMBL
Match: A0A6J1IZM9 (26S proteasome non-ATPase regulatory subunit 7 homolog A-like OS=Cucurbita maxima OX=3661 GN=LOC111482104 PE=3 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 2.3e-168 Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy TrEMBL
Match: A0A6J1F101 (26S proteasome non-ATPase regulatory subunit 7 homolog A-like OS=Cucurbita moschata OX=3662 GN=LOC111441399 PE=3 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 2.3e-168 Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0
BLAST of CmoCh06G002320 vs. ExPASy TrEMBL
Match: A0A6J1CWX4 (26S proteasome non-ATPase regulatory subunit 7 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111015041 PE=3 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 3.0e-168 Identity = 307/310 (99.03%), Postives = 308/310 (99.35%), Query Frame = 0
BLAST of CmoCh06G002320 vs. TAIR 10
Match: AT5G05780.1 (RP non-ATPase subunit 8A ) HSP 1 Score: 537.7 bits (1384), Expect = 6.0e-153 Identity = 271/308 (87.99%), Postives = 290/308 (94.16%), Query Frame = 0
BLAST of CmoCh06G002320 vs. TAIR 10
Match: AT3G11270.1 (Mov34/MPN/PAD-1 family protein ) HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-151 Identity = 268/308 (87.01%), Postives = 291/308 (94.48%), Query Frame = 0
BLAST of CmoCh06G002320 vs. TAIR 10
Match: AT5G05780.2 (RP non-ATPase subunit 8A ) HSP 1 Score: 527.3 bits (1357), Expect = 8.2e-150 Identity = 268/308 (87.01%), Postives = 287/308 (93.18%), Query Frame = 0
BLAST of CmoCh06G002320 vs. TAIR 10
Match: AT3G11270.2 (Mov34/MPN/PAD-1 family protein ) HSP 1 Score: 522.3 bits (1344), Expect = 2.6e-148 Identity = 265/308 (86.04%), Postives = 288/308 (93.51%), Query Frame = 0
BLAST of CmoCh06G002320 vs. TAIR 10
Match: AT2G39990.1 (eukaryotic translation initiation factor 2 ) HSP 1 Score: 112.1 bits (279), Expect = 8.2e-25 Identity = 79/271 (29.15%), Postives = 135/271 (49.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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