CmoCh06G002180 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G002180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionVARLMGL domain-containing protein
LocationCmo_Chr06: 1177030 .. 1178544 (+)
RNA-Seq ExpressionCmoCh06G002180
SyntenyCmoCh06G002180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACATACCTCTACGATCACCCTCCTTGTCTCTTTCCACCCACCCTCTCCCCAAAATTCCCTCTCTCTCTCTCACTCCCTCACTCAACCATGCCCAACTCCGCCTGCTTTCCCGCCCTCTTCCGCCGCCTCCTCTGCTCCGGCAACCTCCCCACTCACCCATCTGAAGCTCTCAACGAACCCAACTCCGAGCCTAAACTCGTGCCTCCAGCGTCCGAGCCCAGCCCGGGCGTGGTGGCTCGCCTGATGGGTTTGAGTTCGCTTCCAGACGCCAATTGGGTTCCTGCCAATCGTGCCCCAGGTGCGGTTTCCAGGAGCAAGTCCGTGAATTTCGCGGATTATTTGCTCCATTTTGACACTAACCAAGCCCACCACCGCCGAATCCGAACCTCGGCTTCGTTCCGGGAGGTCCCGGCGTTGAGCCCACAGAACGAATTCTTTGTTCTTTACACGAAGGATTATTTCGACGGCTACGCTGTGGAAATTGAATCCAATTTGAAGAAACTCGAAACGCAGCGTTTTGGCGAAGAGAAACAGGGGAAGGAACAGAGCAGGAGCAATAATATGAAGACGAAGAAGAAGAAGATGAATGAATCGAAGATTTCGAAGCTTAAAGATGAGCCACGAAGGGAAATTGGTAAGAATTTCACCAACAGTAAAAAATGCAGCACGAGTAAAGATTCATTCTCTGTTTTACCTCCGGGTAAATACAGAGACAAACAGAATGTTCCCAAAAATGGCCATACTGTGAATTCGAAGAAGCCAGTAAAGCAACAGGAATCCGCCATTGAAACAGAGCTCAACAAGAACATTAAGAAGAAGAAGAAGAAGAAGAAGAATGTTAGCCGACATGTCGGGCAGACATCGCAGCCCGAATCCGACCAGGAAAACTCCAGTCCAGTGTCGGTTCTCGATGTCCAAGGAATCTATTTCTCAGGTAACTACTCTCTAATAATCACTGGGTTTATTCCAAAAATCTCTATACCTTATCATAAACTTTTACAGACGAAATGGAGGAAACTGATGTGAAGGGCGGAGACGCCGCCGGCCGGAGCGAGAAACTGTTGGAAAGAATCTGCAGATTGGCGGAGGAAGATATAAAAGAGGCAACGTGGAGGATTAAGAAGGTGGATGTGGAAGAATTATGCATGGAGGTGGAACGACATGTCGTCAATGCGTTGTTGGTTGAGAGCCTAGATGAGTTAGTGTTGTTGTAGTTGCAGACTTGCAGTGGAATTCCTTAACAATGACAAAAACATCTGTAATCTGTACATAAGCTCAGCTAGATGCCTCCATGTCGGAAAAGTCTGGTACTTTTAGTGGAAAAACTAATTCCAAAAGATATAATTGAATTAACTCTGGGGGAGAGAATTTATATTGTGTACTAATGGGTACGACCCCTATTCTTGAGATTCAGATTCCAAATTCAATATCTAATGGTCCTGACATTTATCCTATACGTCTGTAACACGGTTACTTTACTTATTCTTCACTTTTAAGAATAAAAACTATTCCC

mRNA sequence

AAACATACCTCTACGATCACCCTCCTTGTCTCTTTCCACCCACCCTCTCCCCAAAATTCCCTCTCTCTCTCTCACTCCCTCACTCAACCATGCCCAACTCCGCCTGCTTTCCCGCCCTCTTCCGCCGCCTCCTCTGCTCCGGCAACCTCCCCACTCACCCATCTGAAGCTCTCAACGAACCCAACTCCGAGCCTAAACTCGTGCCTCCAGCGTCCGAGCCCAGCCCGGGCGTGGTGGCTCGCCTGATGGGTTTGAGTTCGCTTCCAGACGCCAATTGGGTTCCTGCCAATCGTGCCCCAGGTGCGGTTTCCAGGAGCAAGTCCGTGAATTTCGCGGATTATTTGCTCCATTTTGACACTAACCAAGCCCACCACCGCCGAATCCGAACCTCGGCTTCGTTCCGGGAGGTCCCGGCGTTGAGCCCACAGAACGAATTCTTTGTTCTTTACACGAAGGATTATTTCGACGGCTACGCTGTGGAAATTGAATCCAATTTGAAGAAACTCGAAACGCAGCGTTTTGGCGAAGAGAAACAGGGGAAGGAACAGAGCAGGAGCAATAATATGAAGACGAAGAAGAAGAAGATGAATGAATCGAAGATTTCGAAGCTTAAAGATGAGCCACGAAGGGAAATTGGTAAGAATTTCACCAACAGTAAAAAATGCAGCACGAGTAAAGATTCATTCTCTGTTTTACCTCCGGGTAAATACAGAGACAAACAGAATGTTCCCAAAAATGGCCATACTGTGAATTCGAAGAAGCCAGTAAAGCAACAGGAATCCGCCATTGAAACAGAGCTCAACAAGAACATTAAGAAGAAGAAGAAGAAGAAGAAGAATGTTAGCCGACATGTCGGGCAGACATCGCAGCCCGAATCCGACCAGGAAAACTCCAGTCCAGTGTCGGTTCTCGATGTCCAAGGAATCTATTTCTCAGACGAAATGGAGGAAACTGATGTGAAGGGCGGAGACGCCGCCGGCCGGAGCGAGAAACTGTTGGAAAGAATCTGCAGATTGGCGGAGGAAGATATAAAAGAGGCAACGTGGAGGATTAAGAAGGTGGATGTGGAAGAATTATGCATGGAGGTGGAACGACATGTCGTCAATGCGTTGTTGGTTGAGAGCCTAGATGAGTTAGTGTTGTTGTAGTTGCAGACTTGCAGTGGAATTCCTTAACAATGACAAAAACATCTGTAATCTGTACATAAGCTCAGCTAGATGCCTCCATGTCGGAAAAGTCTGGTACTTTTAGTGGAAAAACTAATTCCAAAAGATATAATTGAATTAACTCTGGGGGAGAGAATTTATATTGTGTACTAATGGGTACGACCCCTATTCTTGAGATTCAGATTCCAAATTCAATATCTAATGGTCCTGACATTTATCCTATACGTCTGTAACACGGTTACTTTACTTATTCTTCACTTTTAAGAATAAAAACTATTCCC

Coding sequence (CDS)

ATGCCCAACTCCGCCTGCTTTCCCGCCCTCTTCCGCCGCCTCCTCTGCTCCGGCAACCTCCCCACTCACCCATCTGAAGCTCTCAACGAACCCAACTCCGAGCCTAAACTCGTGCCTCCAGCGTCCGAGCCCAGCCCGGGCGTGGTGGCTCGCCTGATGGGTTTGAGTTCGCTTCCAGACGCCAATTGGGTTCCTGCCAATCGTGCCCCAGGTGCGGTTTCCAGGAGCAAGTCCGTGAATTTCGCGGATTATTTGCTCCATTTTGACACTAACCAAGCCCACCACCGCCGAATCCGAACCTCGGCTTCGTTCCGGGAGGTCCCGGCGTTGAGCCCACAGAACGAATTCTTTGTTCTTTACACGAAGGATTATTTCGACGGCTACGCTGTGGAAATTGAATCCAATTTGAAGAAACTCGAAACGCAGCGTTTTGGCGAAGAGAAACAGGGGAAGGAACAGAGCAGGAGCAATAATATGAAGACGAAGAAGAAGAAGATGAATGAATCGAAGATTTCGAAGCTTAAAGATGAGCCACGAAGGGAAATTGGTAAGAATTTCACCAACAGTAAAAAATGCAGCACGAGTAAAGATTCATTCTCTGTTTTACCTCCGGGTAAATACAGAGACAAACAGAATGTTCCCAAAAATGGCCATACTGTGAATTCGAAGAAGCCAGTAAAGCAACAGGAATCCGCCATTGAAACAGAGCTCAACAAGAACATTAAGAAGAAGAAGAAGAAGAAGAAGAATGTTAGCCGACATGTCGGGCAGACATCGCAGCCCGAATCCGACCAGGAAAACTCCAGTCCAGTGTCGGTTCTCGATGTCCAAGGAATCTATTTCTCAGACGAAATGGAGGAAACTGATGTGAAGGGCGGAGACGCCGCCGGCCGGAGCGAGAAACTGTTGGAAAGAATCTGCAGATTGGCGGAGGAAGATATAAAAGAGGCAACGTGGAGGATTAAGAAGGTGGATGTGGAAGAATTATGCATGGAGGTGGAACGACATGTCGTCAATGCGTTGTTGGTTGAGAGCCTAGATGAGTTAGTGTTGTTGTAG

Protein sequence

MPNSACFPALFRRLLCSGNLPTHPSEALNEPNSEPKLVPPASEPSPGVVARLMGLSSLPDANWVPANRAPGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNEFFVLYTKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKKMNESKISKLKDEPRREIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQESAIETELNKNIKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSEKLLERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVNALLVESLDELVLL
Homology
BLAST of CmoCh06G002180 vs. ExPASy TrEMBL
Match: A0A6J1FV14 (uncharacterized protein LOC111447527 OS=Cucurbita moschata OX=3662 GN=LOC111447527 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 9.3e-190
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0

Query: 1   MPNSACFPALFRRLLCSGNLPTHPSEALNEPNSEPKLVPPASEPSPGVVARLMGLSSLPD 60
           MPNSACFPALFRRLLCSGNLPTHPSEALNEPNSEPKLVPPASEPSPGVVARLMGLSSLPD
Sbjct: 1   MPNSACFPALFRRLLCSGNLPTHPSEALNEPNSEPKLVPPASEPSPGVVARLMGLSSLPD 60

Query: 61  ANWVPANRAPGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNEFFVLY 120
           ANWVPANRAPGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNEFFVLY
Sbjct: 61  ANWVPANRAPGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNEFFVLY 120

Query: 121 TKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKKMNESKISKLKDEPRR 180
           TKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKKMNESKISKLKDEPRR
Sbjct: 121 TKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKKMNESKISKLKDEPRR 180

Query: 181 EIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQESAIETELNKN 240
           EIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQESAIETELNKN
Sbjct: 181 EIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQESAIETELNKN 240

Query: 241 IKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSE 300
           IKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSE
Sbjct: 241 IKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSE 300

Query: 301 KLLERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVNALLVESLDELVLL 353
           KLLERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVNALLVESLDELVLL
Sbjct: 301 KLLERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVNALLVESLDELVLL 352

BLAST of CmoCh06G002180 vs. ExPASy TrEMBL
Match: A0A6J1I7D0 (uncharacterized protein LOC111470283 OS=Cucurbita maxima OX=3661 GN=LOC111470283 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.9e-179
Identity = 333/352 (94.60%), Postives = 343/352 (97.44%), Query Frame = 0

Query: 1   MPNSACFPALFRRLLCSGNLPTHPSEALNEPNSEPKLVPPASEPSPGVVARLMGLSSLPD 60
           MPNSACFPAL RRLLCSGNLPTHPSEALNEPNS+PKLVPPASEP PGVVARLMGLSSLPD
Sbjct: 1   MPNSACFPALLRRLLCSGNLPTHPSEALNEPNSQPKLVPPASEPGPGVVARLMGLSSLPD 60

Query: 61  ANWVPANRAPGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNEFFVLY 120
           ANWVP NRAPGAVSRSKSVNFADYLLHFD+NQAHHRRIRTSASFREVP L+PQNEFFVLY
Sbjct: 61  ANWVPTNRAPGAVSRSKSVNFADYLLHFDSNQAHHRRIRTSASFREVPPLNPQNEFFVLY 120

Query: 121 TKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKKMNESKISKLKDEPRR 180
           TKDYFDGYAVEIES+LKKLETQRFGEEKQGKEQSRSN+MKTKKKK NESKISKLKDEPRR
Sbjct: 121 TKDYFDGYAVEIESSLKKLETQRFGEEKQGKEQSRSNDMKTKKKKNNESKISKLKDEPRR 180

Query: 181 EIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQESAIETELNKN 240
           EIGKNFTNSKKCSTSKDSFSVLP GKY+DKQNVPKNGHTVNSKKPVKQQESAIETELNKN
Sbjct: 181 EIGKNFTNSKKCSTSKDSFSVLPSGKYKDKQNVPKNGHTVNSKKPVKQQESAIETELNKN 240

Query: 241 IKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSE 300
           IKKK+KKKKNVSRHVGQ S+PESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSE
Sbjct: 241 IKKKEKKKKNVSRHVGQKSKPESDQENSSPVSVLDVQGIYFSDEMEETDVKGGDAAGRSE 300

Query: 301 KLLERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVNALLVESLDELVLL 353
           KL+ERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVN LL ESL+ELVLL
Sbjct: 301 KLVERICRLAEEDIKEATWRIKKVDVEELCMEVERHVVNVLLDESLEELVLL 352

BLAST of CmoCh06G002180 vs. ExPASy TrEMBL
Match: A0A6J1CWJ6 (uncharacterized protein LOC111015050 OS=Momordica charantia OX=3673 GN=LOC111015050 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 9.5e-102
Identity = 223/363 (61.43%), Postives = 259/363 (71.35%), Query Frame = 0

Query: 2   PNSACFPALFRRLLCSGNLPTHPSEALNEPNSEPKLVPPASEPSPGVVARLMGLSSLPDA 61
           PN  CF  + RRLLC+GNLPTHPS+ALNEP  E       ++P PGVVARLMGLSSLPDA
Sbjct: 7   PNPGCFSGMLRRLLCTGNLPTHPSDALNEPQLEK---AAEAKPGPGVVARLMGLSSLPDA 66

Query: 62  NWVPANRAPGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNEFFVLYT 121
           NWVP +RAPGAV RSKSVNFADYLLHFD++QAHHRR+RTSASFREVP L+P N+F VLYT
Sbjct: 67  NWVPNHRAPGAVPRSKSVNFADYLLHFDSSQAHHRRVRTSASFREVPPLNPHNDFLVLYT 126

Query: 122 KDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKKMNESKISKLKDEPRRE 181
           KDYFDGY  EIESNLK+ ET R  E KQGKE   SN  K KK   NE KISKLK+EPRRE
Sbjct: 127 KDYFDGYEAEIESNLKEPETHRLREAKQGKELQSSNVKKKKKNSRNEFKISKLKNEPRRE 186

Query: 182 IGKNFT-NSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVN----SKKPVKQQESAIETE 241
           +GK+F+  ++KCS++KDS SVLP  KY  KQ+V K     N     KKP KQ+E AI TE
Sbjct: 187 VGKDFSKKNRKCSSNKDSVSVLPSCKY--KQSVTKKLGAANLKSPQKKPPKQKEVAIGTE 246

Query: 242 LNKNIKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKGG--- 301
           +      KKK K N  RHVG    PESD +NSSP+SVLD  G  FSDE      +GG   
Sbjct: 247 V------KKKIKNNSLRHVGTKPDPESDPDNSSPISVLDDGGFDFSDERSSPKTEGGLEK 306

Query: 302 --DAAGRSEKLLERICRLAEEDIKEATWRIKKV----DVEELCMEVERHVVNALLVESLD 351
                 RSE+ + R CRLA+EDI+EA W +K V     +EELCME+ERHVVN LLV++LD
Sbjct: 307 CQTGGDRSEEEVGRSCRLADEDIREANWSVKNVWEYEALEELCMELERHVVNVLLVQTLD 358

BLAST of CmoCh06G002180 vs. ExPASy TrEMBL
Match: A0A0A0L9V4 (VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731120 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.1e-101
Identity = 235/366 (64.21%), Postives = 267/366 (72.95%), Query Frame = 0

Query: 2   PNSACFPALFRRLLCSGNLPTHPSEALNE-----PNSEPKLVPPASEPSPGVVARLMGLS 61
           PNS CF  + RRLLC+GNLPTHPSEALN+     P +E KLV  ++E +PGVVARLMGLS
Sbjct: 7   PNSCCFSGILRRLLCTGNLPTHPSEALNDSQFDIPKTEAKLVAQSAESTPGVVARLMGLS 66

Query: 62  SLPDANWVPANRA-PGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNE 121
           SLPDANWVP +RA PGAVSRSKSVNFADYLL FD+NQ+HHRRIRTSASFREV    P N+
Sbjct: 67  SLPDANWVPNHRARPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREV----PHND 126

Query: 122 FFVLYTKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKK---MNESKIS 181
           +FVLYTKDYFDGY   IESN KK ETQRF E   GK+ S   N K KKKK    NE KIS
Sbjct: 127 YFVLYTKDYFDGYG--IESNSKKPETQRFDE---GKQSSNDLNKKKKKKKENGRNEMKIS 186

Query: 182 KLKDEPRREIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQESA 241
           KLKDEPRR   KNFT SKKCS  KDSFSVLP  K++ KQNVP+N  +V  KKP KQ+E+A
Sbjct: 187 KLKDEPRRVNRKNFTESKKCSMGKDSFSVLPSCKHKCKQNVPRNESSVIQKKPTKQKEAA 246

Query: 242 IETELNKNIKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVKG 301
           I TELN      KKKKKNV RHV +    E D ENSSPVSVLDV  I FSDE +   + G
Sbjct: 247 IRTELN------KKKKKNV-RHVERKPDVEPDSENSSPVSVLDVGRIDFSDERQ---IGG 306

Query: 302 GDAAGRSEKLLERICRLAEEDIKEATW--RIKKVD----VEELCMEVERHVVNALLVESL 353
            +      +L+ERICRLAEEDI+EA W   IK VD    +EE+CME+ERHVV+ALLV +L
Sbjct: 307 KNRVYDYGELVERICRLAEEDIREAKWTAEIKNVDESEALEEICMEIERHVVDALLVHTL 353

BLAST of CmoCh06G002180 vs. ExPASy TrEMBL
Match: E5GBE7 (VARLMGL domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.9e-97
Identity = 227/367 (61.85%), Postives = 264/367 (71.93%), Query Frame = 0

Query: 2   PNSACFPALFRRLLCSGNLPTHPSEALNE-----PNSEPKLVPPASEPSPGVVARLMGLS 61
           PNS CF  + RRLLC+GNLPTHPSEAL+E     P +E KL   ++E +PGVVARLMGLS
Sbjct: 7   PNSGCFSGILRRLLCTGNLPTHPSEALHESQFDIPKTEAKLAAQSAESTPGVVARLMGLS 66

Query: 62  SLPDANWVPANRA-PGAVSRSKSVNFADYLLHFDTNQAHHRRIRTSASFREVPALSPQNE 121
           SLPDANWVP ++  PGAVSRSKSVNFADYLL FD+NQ+HHRRIRTSASFREVP L+P N+
Sbjct: 67  SLPDANWVPNHQVRPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREVPPLNPHND 126

Query: 122 FFVLYTKDYFDGYAVEIESNLKKLETQRFGEEKQGKEQSRSNNMKTKKKK----MNESKI 181
           FFVLYTKD F+GY   IESNLKK ETQRF E KQ      SN++K KKKK     NE KI
Sbjct: 127 FFVLYTKDCFNGYG--IESNLKKPETQRFDEGKQS-----SNDLKKKKKKKENARNEMKI 186

Query: 182 SKLKDEPRREIGKNFTNSKKCSTSKDSFSVLPPGKYRDKQNVPKNGHTVNSKKPVKQQES 241
           SKLKDEPRR   KNFT SKKCS  KDSFSVLP  K++ K+++P+N   V  KKP  Q+E+
Sbjct: 187 SKLKDEPRRVSRKNFTESKKCSMGKDSFSVLPSCKHKCKRSIPRNESAVIQKKPTMQKEA 246

Query: 242 AIETELNKNIKKKKKKKKNVSRHVGQTSQPESDQENSSPVSVLDVQGIYFSDEMEETDVK 301
            I TELN      KKKKKNV RHV +    + D ENSSPVSVLDV  I FSDE +   + 
Sbjct: 247 TIRTELN------KKKKKNV-RHVERKPDLQLDSENSSPVSVLDVGRIEFSDERQ---IG 306

Query: 302 GGDAAGRSEKLLERICRLAEEDIKEATW--RIKKVD----VEELCMEVERHVVNALLVES 353
           G +      +L+ERICRLAEEDI EA W   IK  D    +EE+CME+ERHVV+ALLV +
Sbjct: 307 GKNRVYDYGELVERICRLAEEDI-EAKWTAEIKNADKSEALEEICMEIERHVVDALLVHT 355

BLAST of CmoCh06G002180 vs. TAIR 10
Match: AT5G01370.1 (ALC-interacting protein 1 )

HSP 1 Score: 72.8 bits (177), Expect = 6.2e-13
Identity = 116/448 (25.89%), Postives = 177/448 (39.51%), Query Frame = 0

Query: 2   PNSACFPALFRRLLCSGNLPTHPSEAL------------NEPNSEPK------------- 61
           P + C  A+ RRLLCSG+  THPS+ +             E N EPK             
Sbjct: 7   PKTGCLTAVVRRLLCSGSQQTHPSDNILDSDETLQLLISYEENEEPKKEIKTETETQNDD 66

Query: 62  --LVPPASEPSPGVVARLMGLS--SLPDANWVPANRAPGAVSRSKSVNFADYLL--HFD- 121
             L PP   P P VVA+LMGL   +     +   + +  AV+RSKSVNF DY+L  H + 
Sbjct: 67  VSLHPPPPPPPPNVVAKLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYILKGHEEE 126

Query: 122 -------TNQAHHRRIRTSASFRE-VPALSPQNEFFVLYTKDYFDGYAVEIESNLKKLET 181
                    Q   RR++ S SFRE VP  +  +        D+   Y  +++   + + +
Sbjct: 127 EENEDEKDGQRQCRRVKASVSFREIVPTSARWSSNNQQKKHDFLLLYLDKLDEKRELVGS 186

Query: 182 QRFGEEKQGK---EQSRSNNM--KTKKKKMNESKISKLKDEPRREIGKNFTNSKKCSTSK 241
             F   K+ +   E S+   +     KKK NE    K KDEPR+                
Sbjct: 187 SSFSRSKRFEKVVEDSKKPPLPPSAPKKKENEKVAKKFKDEPRKVA-------------- 246

Query: 242 DSFSVLPPGKYRDKQNVPKNGHTVNSKKPVK--QQESAIETELNKNIKKKKKKKKNVSRH 301
                        K+   +N + VN  K V+     S  ++   K     + K       
Sbjct: 247 -------------KKKKSENRNDVNGAKKVRWFLSPSKSKSSSEKTALLGESKNIRADEF 306

Query: 302 VGQTSQPESDQENSSPVSVLD---------VQGIYF----SDEMEETDVKGGDAAGRSE- 352
           +G+ S+   ++ N+SPVSVLD             YF    S+   E   K  + A +S  
Sbjct: 307 IGKESESPENKSNASPVSVLDRDLYDYLILDDDYYFSGGDSESASELSTKQVETATKSSC 366

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FV149.3e-190100.00uncharacterized protein LOC111447527 OS=Cucurbita moschata OX=3662 GN=LOC1114475... [more]
A0A6J1I7D01.9e-17994.60uncharacterized protein LOC111470283 OS=Cucurbita maxima OX=3661 GN=LOC111470283... [more]
A0A6J1CWJ69.5e-10261.43uncharacterized protein LOC111015050 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A0A0L9V42.1e-10164.21VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731120 PE=... [more]
E5GBE71.9e-9761.85VARLMGL domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G01370.16.2e-1325.89ALC-interacting protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..186
NoneNo IPR availablePANTHERPTHR35499OS05G0128300 PROTEINcoord: 300..351
NoneNo IPR availablePANTHERPTHR35499OS05G0128300 PROTEINcoord: 3..288
NoneNo IPR availablePANTHERPTHR35499:SF4ALC-INTERACTING PROTEIN 1coord: 3..288
coord: 300..351
IPR032795DUF3741-associated sequence motifPFAMPF14383VARLMGLcoord: 45..62
e-value: 4.8E-8
score: 32.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G002180.1CmoCh06G002180.1mRNA