Homology
BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match:
Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 825.1 bits (2130), Expect = 5.9e-238
Identity = 391/689 (56.75%), Postives = 515/689 (74.75%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNC-FKQLKHIHCRLLRLHLDQDNYLLNTLLSSGL 60
MSI+T P++ SK +IK ++ V C LK IH L+ HL D +L+N LL L
Sbjct: 1 MSIVTVPSAT--SKVQQIKTLIS--VACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 60
Query: 61 DSGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPF 120
T YS L+FS + PNIFL+N++I G V+ F + +D++ S+R+ G + FTFP
Sbjct: 61 FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 120
Query: 121 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 180
VLKAC R +LG+ +H+LVVK GF++DV TSLLS+Y+ L +A K+FD++PD++
Sbjct: 121 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 180
Query: 181 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 240
VV+WTA+ +GY SG+ REAID FK+++EMG++PDS+ +V+VLSAC +GD SGEWI +
Sbjct: 181 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 240
Query: 241 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQ 300
Y+ + +N FV T+L+++Y KCG ME+A +F++M EKDIV+WSTMIQGYA N PK+
Sbjct: 241 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 300
Query: 301 ALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALID 360
++LF QM ENLKPD +++VG LS+CA LGALDLG W SL+DRHEFL+N + ALID
Sbjct: 301 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 360
Query: 361 MYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENT 420
MY+KCG++ R +E+F+ M++KD V+ NA I GL+ NGH K F++F K GI PD +T
Sbjct: 361 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 420
Query: 421 FIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSM 480
F+GLLCGC H G + +G R+FN++ V++L ++EHYGCMVDL GRAG+LD+A+RLI M
Sbjct: 421 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 480
Query: 481 PMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAE 540
PM+PNA+VWGALL GCRL +D+ LAE VLK+LI LEPWN+GNYV LSNIYS RW+EA
Sbjct: 481 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 540
Query: 541 KIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVP 600
++R M ++ ++KI G SWIE++G VHEFL DKSH LSDKIYAKL++LG E++ G VP
Sbjct: 541 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 600
Query: 601 TTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLIS 660
TTEFV FD+EEEEKE LG HSEKLAVA GLIS+ + VIRVVKNLRVCGDCHE +KLIS
Sbjct: 601 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 660
Query: 661 KITGREIIIRDTNRFHTFIDGSCSCKDYW 688
KIT REI++RD NRFH F +GSCSC DYW
Sbjct: 661 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 600.1 bits (1546), Expect = 3.1e-170
Identity = 304/703 (43.24%), Postives = 433/703 (61.59%), Query Frame = 0
Query: 22 LANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTD---YSKLVFSQAKEPN 81
L + + L+ IH +++++ L NY L+ L+ + S + Y+ VF +EPN
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 82 IFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHT 141
+ +WNTM RG A+ +Y M G LPN++TFPFVLK+CA+ + G +IH
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 142 LVVKAGFDYDVFVKTSLLSLYAKCDNL-------------------------------EN 201
V+K G D D++V TSL+S+Y + L EN
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 202 ALKVFDDMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ 261
A K+FD++P K+VVSW A+I+GY +G ++EA++ FK +++ +RPD ++V V+SACAQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 262 LGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTM 321
G G + +I D GF N+ + +L+D+Y KCG +E A +F + KD++SW+T+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 322 IQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRH-- 381
I GY L K+AL LF +M P+ M+ +L ACA LGA+D+G W +D+
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 382 EFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLF 441
+ L T+LIDMY+KCG + A ++F S+ K WNAMI G +M+G A A F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 442 SLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGR 501
S + K GI+PD+ TF+GLL C+H G +D GR F +M Q + +TP +EHYGCM+DLLG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 502 AGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLL 561
+GL EA +IN M M+P+ V+W +LL C++H + L E + LI++EP N G+YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 562 SNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKL 621
SNIY+++ RW E K R+ + ++ ++K+ GCS IEID +VHEF++GDK H + +IY L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 622 DELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSS-NHVIRVVKNL 681
+E+ L+ AG VP T VL ++EEE KE L HSEKLA+AFGLIS+ + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698
Query: 682 RVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
RVC +CHEA KLISKI REII RD RFH F DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 554.7 bits (1428), Expect = 1.5e-156
Identity = 286/722 (39.61%), Postives = 427/722 (59.14%), Query Frame = 0
Query: 5 TNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLS-SGLDS-G 64
+NP P + L +QLK H ++R D Y + L + + L S
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 65 CTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYG---SMRREGFLPNNFTFPF 124
+Y++ VF + +PN F WNT+IR S D + ++ + PN +TFPF
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPF 138
Query: 125 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 184
++KA A + LG +H + VK+ DVFV SL+ Y C +L++A KVF + +K+
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 198
Query: 185 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 244
VVSW ++I G++ G +A++ FK++ ++ ++V VLSACA++ + G +
Sbjct: 199 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 258
Query: 245 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAF------ 304
YI + N+ +A ++LDMY KCG++E A +F+AM EKD V+W+TM+ GYA
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318
Query: 305 -------------------------NGLPKQALDLFFQMQ-SENLKPDCYAMVGVLSACA 364
NG P +AL +F ++Q +N+K + +V LSACA
Sbjct: 319 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 378
Query: 365 RLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNA 424
++GAL+LG W S + +H N + +ALI MYSKCG + ++ E+F S+EK+D VW+A
Sbjct: 379 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 438
Query: 425 MIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVF 484
MI GL+M+G +F + + ++P+ TF + C C+H G VDE F+ M+ +
Sbjct: 439 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 498
Query: 485 SLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQV 544
+ P +HY C+VD+LGR+G L++A + I +MP+ P+ VWGALLG C++H + +LAE
Sbjct: 499 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 558
Query: 545 LKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHE 604
+L+ELEP N G +VLLSNIY+ +WE ++R M+ ++K GCS IEIDG++HE
Sbjct: 559 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 618
Query: 605 FLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAV 664
FL GD +H +S+K+Y KL E+ +LK+ G+ P VL IEEEE KE L HSEKLA+
Sbjct: 619 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 678
Query: 665 AFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKD 688
+GLIS+ + VIRV+KNLRVCGDCH KLIS++ REII+RD RFH F +G CSC D
Sbjct: 679 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 738
BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 554.7 bits (1428), Expect = 1.5e-156
Identity = 267/660 (40.45%), Postives = 406/660 (61.52%), Query Frame = 0
Query: 31 QLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTDYSKLVFSQAKEPNIFLWNTMIRGLV 90
QLK IH RLL L L +L+ L+ + G +++ VF P IF WN +IRG
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 91 SKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHTLVVKAGFDYDVF 150
+ F DA+ +Y +M+ P++FTFP +LKAC+ +++G +H V + GFD DVF
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 151 VKTSLLSLYAKCDNLENALKVFD--DMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLE 210
V+ L++LYAKC L +A VF+ +P++ +VSWTAI++ Y +G+ EA++ F ++ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 211 MGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMER 270
M ++PD +LV VL+A L D G I + G + SL MY KCG +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 271 ANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACAR 330
A ++F+ M +++ W+ MI GYA NG ++A+D+F +M +++++PD ++ +SACA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 331 LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAM 390
+G+L+ + R ++ + + +ALIDM++KCGSV A +F +D VVW+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 391 IVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFS 450
IVG ++G A+ SL+ + + G+ P++ TF+GLL C H G V EG +FN M
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 455
Query: 451 LTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVL 510
+ P +HY C++DLLGRAG LD+A+ +I MP+QP VWGALL C+ HR L E
Sbjct: 456 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 515
Query: 511 KKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEF 570
++L ++P N+G+YV LSN+Y+A+ W+ ++R MKE+ + K GCSW+E+ G + F
Sbjct: 516 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 575
Query: 571 LVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAF 630
VGDKSH ++I +++ + LK G V + L D+ +EE E L HSE++A+A+
Sbjct: 576 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 635
Query: 631 GLISSSNHV-IRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
GLIS+ +R+ KNLR C +CH A KLISK+ REI++RDTNRFH F DG CSC DYW
Sbjct: 636 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 535.0 bits (1377), Expect = 1.2e-150
Identity = 270/686 (39.36%), Postives = 418/686 (60.93%), Query Frame = 0
Query: 11 VFSKALEIKNYLANGVN-CFKQLKHIHCR------LLRLHLDQDNYLLNTLLSSGLDSGC 70
+ S +E+ +Y + V+ F L+ +H +L+ + N + N+L++ L +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 71 TDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 130
D ++ VF + E ++ WN++I G VS + + V+ M G + T V
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 131 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 190
CA I LG +H++ VKA F + +LL +Y+KC +L++A VF +M D++VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 191 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 250
T++I GY G EA+ F+ + E G+ PD +++ VL+ CA+ G+ + +I +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 251 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 310
++FV+ +L+DMY KCG+M+ A L+F+ M KDI+SW+T+I GY+ N +AL L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 311 F-FQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYS 370
F ++ + PD + VL ACA L A D G + R+ + S+ + +L+DMY+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 371 KCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIG 430
KCG++ A +F + KD V W MI G M+G K +LF+ + + GI DE +F+
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 431 LLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQ 490
LL C+H G VDEG R+FN M+ + P++EHY C+VD+L R G L +A+R I +MP+
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 491 PNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIR 550
P+A +WGALL GCR+H D LAE+V +K+ ELEP N+G YVL++NIY+ + +WE+ +++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 551 SAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTE 610
+ ++ ++K GCSWIEI G V+ F+ GD S+ ++ I A L ++ + G+ P T+
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785
Query: 611 FVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLISKIT 670
+ L D EE EKE L HSEKLA+A G+ISS + +IRV KNLRVCGDCHE K +SK+T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 671 GREIIIRDTNRFHTFIDGSCSCKDYW 688
REI++RD+NRFH F DG CSC+ +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match:
A0A6J1GIB8 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita moschata OX=3662 GN=LOC111454160 PE=3 SV=1)
HSP 1 Score: 1417.5 bits (3668), Expect = 0.0e+00
Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD
Sbjct: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
Query: 61 SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV
Sbjct: 61 SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA
Sbjct: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKI 660
TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKI
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKI 660
Query: 661 TGREIIIRDTNRFHTFIDGSCSCKDYW 688
TGREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 TGREIIIRDTNRFHTFIDGSCSCKDYW 687
BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match:
A0A6J1I8T1 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxima OX=3661 GN=LOC111470216 PE=3 SV=1)
HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 677/688 (98.40%), Postives = 681/688 (98.98%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLH DQDNYLLNTLLS GLD
Sbjct: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHFDQDNYLLNTLLSCGLD 60
Query: 61 SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
SGCT+Y+KLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV
Sbjct: 61 SGCTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
ISDCG VRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA
Sbjct: 241 ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMD+HEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDM 360
Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLV KHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420
Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
IGLLCGCTHGGFVDEGRRYFNSMK+VFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
IRSAMKEQRIQKIRGCSWIEI GIVHEFLVGDKSHSLSDKIYAKLDELGRELKA GHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIHGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPT 600
Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660
TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS SNHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISK 660
Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
ITGREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match:
A0A6J1CU24 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Momordica charantia OX=3673 GN=LOC111014228 PE=3 SV=1)
HSP 1 Score: 1296.6 bits (3354), Expect = 0.0e+00
Identity = 624/688 (90.70%), Postives = 655/688 (95.20%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
M+ILTNP+SPVFSKALEIKNYL+NGV+CFK LK +H RLLRL LDQDNYLLN +L GL
Sbjct: 1 MTILTNPSSPVFSKALEIKNYLSNGVHCFKHLKQVHARLLRLDLDQDNYLLNIILCCGLH 60
Query: 61 SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
S T+Y+KLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRR+GFLPNNFTFPFV
Sbjct: 61 SNSTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRRQGFLPNNFTFPFV 120
Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
LKACARK DIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDD+PDKNV
Sbjct: 121 LKACARKFDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDIPDKNV 180
Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ GDF SGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQHGDFKSGEWIDRY 240
Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
I+D G RNVFVATSLLDMYVKCGNMERANLIF+AM EKDIVSWSTMIQGYAFNGLPKQA
Sbjct: 241 ITDSGLGRNVFVATSLLDMYVKCGNMERANLIFHAMPEKDIVSWSTMIQGYAFNGLPKQA 300
Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
LDLFFQM S+NLKPDCYAMVGVLSACARLGALDLG WAS+LMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMHSQNLKPDCYAMVGVLSACARLGALDLGNWASTLMDRHEFLSNPVLGTALIDM 360
Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
Y+KCGSV RAWEIF++MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLV KHGI+PDENTF
Sbjct: 361 YTKCGSVARAWEIFQAMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420
Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
IGLLCGCTHGGFV+EGR+YF+SMK+VFSLTPSIEHYGCMVDLLGRAG L EA +LINSMP
Sbjct: 421 IGLLCGCTHGGFVNEGRQYFDSMKRVFSLTPSIEHYGCMVDLLGRAGFLGEAQQLINSMP 480
Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
M+PNAVVWGALLGGCRLHRD+HLAEQVL KLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCRLHRDTHLAEQVLMKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
IRS MKE RIQKIRGCSWIE+DGIVH+FLVGDKSHS S+KIYAKLDEL RELK AGH+PT
Sbjct: 541 IRSTMKEHRIQKIRGCSWIEVDGIVHQFLVGDKSHSFSEKIYAKLDELSRELKEAGHMPT 600
Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLIS-SSNHVIRVVKNLRVCGDCHEAIKLISK 660
TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLIS NH+IRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISFPKNHIIRVVKNLRVCGDCHEAIKLISK 660
Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
ITGREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match:
A0A5D3DMV5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00430 PE=3 SV=1)
HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 612/688 (88.95%), Postives = 653/688 (94.91%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
M+ILTNP+SPVFSKAL+IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLN +L GLD
Sbjct: 1 MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60
Query: 61 SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
G TDY+KLVFSQ KEPNIFLWNTMIRGLVSKDCFDDAI +YGSMR GFLPNNFTFPFV
Sbjct: 61 FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFV 120
Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
LKACARKLDIRLG+KIHTL+VKAG+D DVFVKTSLLSLY KCDNL++ALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180
Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
VSWTAIITGYI SG FREAI AF++LLEMGL+PDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240
Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
ISD G RNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFNGLP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300
Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWASSLMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
YSKCGSVTRAWEIFR+MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLV KHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420
Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
IGLLCGCTHGGFV+EGR++FN+MK+VFSLTPSIEHYGCMVDLLGRAGLL+EAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480
Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
M+PNAVVWGALLGGC+LH+D+HLAEQVLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540
Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
IR MKEQ+IQKIR CSWIEI+GIVHEFLVGD SHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600
Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660
TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+S N VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660
Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match:
A0A1S3B518 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucumis melo OX=3656 GN=LOC103486253 PE=3 SV=1)
HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 612/688 (88.95%), Postives = 653/688 (94.91%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
M+ILTNP+SPVFSKAL+IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLN +L GLD
Sbjct: 1 MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60
Query: 61 SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
G TDY+KLVFSQ KEPNIFLWNTMIRGLVSKDCFDDAI +YGSMR GFLPNNFTFPFV
Sbjct: 61 FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFV 120
Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
LKACARKLDIRLG+KIHTL+VKAG+D DVFVKTSLLSLY KCDNL++ALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180
Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
VSWTAIITGYI SG FREAI AF++LLEMGL+PDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240
Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
ISD G RNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFNGLP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300
Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWASSLMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
YSKCGSVTRAWEIFR+MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLV KHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420
Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
IGLLCGCTHGGFV+EGR++FN+MK+VFSLTPSIEHYGCMVDLLGRAGLL+EAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480
Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
M+PNAVVWGALLGGC+LH+D+HLAEQVLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540
Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
IR MKEQ+IQKIR CSWIEI+GIVHEFLVGD SHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600
Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660
TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+S N VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660
Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of CmoCh06G001990 vs. TAIR 10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 825.1 bits (2130), Expect = 4.2e-239
Identity = 391/689 (56.75%), Postives = 515/689 (74.75%), Query Frame = 0
Query: 1 MSILTNPASPVFSKALEIKNYLANGVNC-FKQLKHIHCRLLRLHLDQDNYLLNTLLSSGL 60
MSI+T P++ SK +IK ++ V C LK IH L+ HL D +L+N LL L
Sbjct: 1 MSIVTVPSAT--SKVQQIKTLIS--VACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 60
Query: 61 DSGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPF 120
T YS L+FS + PNIFL+N++I G V+ F + +D++ S+R+ G + FTFP
Sbjct: 61 FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 120
Query: 121 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 180
VLKAC R +LG+ +H+LVVK GF++DV TSLLS+Y+ L +A K+FD++PD++
Sbjct: 121 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 180
Query: 181 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 240
VV+WTA+ +GY SG+ REAID FK+++EMG++PDS+ +V+VLSAC +GD SGEWI +
Sbjct: 181 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 240
Query: 241 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQ 300
Y+ + +N FV T+L+++Y KCG ME+A +F++M EKDIV+WSTMIQGYA N PK+
Sbjct: 241 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 300
Query: 301 ALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALID 360
++LF QM ENLKPD +++VG LS+CA LGALDLG W SL+DRHEFL+N + ALID
Sbjct: 301 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 360
Query: 361 MYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENT 420
MY+KCG++ R +E+F+ M++KD V+ NA I GL+ NGH K F++F K GI PD +T
Sbjct: 361 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 420
Query: 421 FIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSM 480
F+GLLCGC H G + +G R+FN++ V++L ++EHYGCMVDL GRAG+LD+A+RLI M
Sbjct: 421 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 480
Query: 481 PMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAE 540
PM+PNA+VWGALL GCRL +D+ LAE VLK+LI LEPWN+GNYV LSNIYS RW+EA
Sbjct: 481 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 540
Query: 541 KIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVP 600
++R M ++ ++KI G SWIE++G VHEFL DKSH LSDKIYAKL++LG E++ G VP
Sbjct: 541 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 600
Query: 601 TTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLIS 660
TTEFV FD+EEEEKE LG HSEKLAVA GLIS+ + VIRVVKNLRVCGDCHE +KLIS
Sbjct: 601 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 660
Query: 661 KITGREIIIRDTNRFHTFIDGSCSCKDYW 688
KIT REI++RD NRFH F +GSCSC DYW
Sbjct: 661 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of CmoCh06G001990 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 600.1 bits (1546), Expect = 2.2e-171
Identity = 304/703 (43.24%), Postives = 433/703 (61.59%), Query Frame = 0
Query: 22 LANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTD---YSKLVFSQAKEPN 81
L + + L+ IH +++++ L NY L+ L+ + S + Y+ VF +EPN
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 82 IFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHT 141
+ +WNTM RG A+ +Y M G LPN++TFPFVLK+CA+ + G +IH
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 142 LVVKAGFDYDVFVKTSLLSLYAKCDNL-------------------------------EN 201
V+K G D D++V TSL+S+Y + L EN
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 202 ALKVFDDMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ 261
A K+FD++P K+VVSW A+I+GY +G ++EA++ FK +++ +RPD ++V V+SACAQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 262 LGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTM 321
G G + +I D GF N+ + +L+D+Y KCG +E A +F + KD++SW+T+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 322 IQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRH-- 381
I GY L K+AL LF +M P+ M+ +L ACA LGA+D+G W +D+
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 382 EFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLF 441
+ L T+LIDMY+KCG + A ++F S+ K WNAMI G +M+G A A F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 442 SLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGR 501
S + K GI+PD+ TF+GLL C+H G +D GR F +M Q + +TP +EHYGCM+DLLG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 502 AGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLL 561
+GL EA +IN M M+P+ V+W +LL C++H + L E + LI++EP N G+YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 562 SNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKL 621
SNIY+++ RW E K R+ + ++ ++K+ GCS IEID +VHEF++GDK H + +IY L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 622 DELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSS-NHVIRVVKNL 681
+E+ L+ AG VP T VL ++EEE KE L HSEKLA+AFGLIS+ + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698
Query: 682 RVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
RVC +CHEA KLISKI REII RD RFH F DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CmoCh06G001990 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-157
Identity = 286/722 (39.61%), Postives = 427/722 (59.14%), Query Frame = 0
Query: 5 TNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLS-SGLDS-G 64
+NP P + L +QLK H ++R D Y + L + + L S
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 65 CTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYG---SMRREGFLPNNFTFPF 124
+Y++ VF + +PN F WNT+IR S D + ++ + PN +TFPF
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPF 138
Query: 125 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 184
++KA A + LG +H + VK+ DVFV SL+ Y C +L++A KVF + +K+
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 198
Query: 185 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 244
VVSW ++I G++ G +A++ FK++ ++ ++V VLSACA++ + G +
Sbjct: 199 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 258
Query: 245 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAF------ 304
YI + N+ +A ++LDMY KCG++E A +F+AM EKD V+W+TM+ GYA
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318
Query: 305 -------------------------NGLPKQALDLFFQMQ-SENLKPDCYAMVGVLSACA 364
NG P +AL +F ++Q +N+K + +V LSACA
Sbjct: 319 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 378
Query: 365 RLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNA 424
++GAL+LG W S + +H N + +ALI MYSKCG + ++ E+F S+EK+D VW+A
Sbjct: 379 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 438
Query: 425 MIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVF 484
MI GL+M+G +F + + ++P+ TF + C C+H G VDE F+ M+ +
Sbjct: 439 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 498
Query: 485 SLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQV 544
+ P +HY C+VD+LGR+G L++A + I +MP+ P+ VWGALLG C++H + +LAE
Sbjct: 499 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 558
Query: 545 LKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHE 604
+L+ELEP N G +VLLSNIY+ +WE ++R M+ ++K GCS IEIDG++HE
Sbjct: 559 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 618
Query: 605 FLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAV 664
FL GD +H +S+K+Y KL E+ +LK+ G+ P VL IEEEE KE L HSEKLA+
Sbjct: 619 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 678
Query: 665 AFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKD 688
+GLIS+ + VIRV+KNLRVCGDCH KLIS++ REII+RD RFH F +G CSC D
Sbjct: 679 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 738
BLAST of CmoCh06G001990 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-157
Identity = 267/660 (40.45%), Postives = 406/660 (61.52%), Query Frame = 0
Query: 31 QLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTDYSKLVFSQAKEPNIFLWNTMIRGLV 90
QLK IH RLL L L +L+ L+ + G +++ VF P IF WN +IRG
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 91 SKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHTLVVKAGFDYDVF 150
+ F DA+ +Y +M+ P++FTFP +LKAC+ +++G +H V + GFD DVF
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 151 VKTSLLSLYAKCDNLENALKVFD--DMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLE 210
V+ L++LYAKC L +A VF+ +P++ +VSWTAI++ Y +G+ EA++ F ++ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 211 MGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMER 270
M ++PD +LV VL+A L D G I + G + SL MY KCG +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 271 ANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACAR 330
A ++F+ M +++ W+ MI GYA NG ++A+D+F +M +++++PD ++ +SACA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 331 LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAM 390
+G+L+ + R ++ + + +ALIDM++KCGSV A +F +D VVW+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 391 IVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFS 450
IVG ++G A+ SL+ + + G+ P++ TF+GLL C H G V EG +FN M
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 455
Query: 451 LTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVL 510
+ P +HY C++DLLGRAG LD+A+ +I MP+QP VWGALL C+ HR L E
Sbjct: 456 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 515
Query: 511 KKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEF 570
++L ++P N+G+YV LSN+Y+A+ W+ ++R MKE+ + K GCSW+E+ G + F
Sbjct: 516 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 575
Query: 571 LVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAF 630
VGDKSH ++I +++ + LK G V + L D+ +EE E L HSE++A+A+
Sbjct: 576 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 635
Query: 631 GLISSSNHV-IRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
GLIS+ +R+ KNLR C +CH A KLISK+ REI++RDTNRFH F DG CSC DYW
Sbjct: 636 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of CmoCh06G001990 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 535.0 bits (1377), Expect = 8.7e-152
Identity = 270/686 (39.36%), Postives = 418/686 (60.93%), Query Frame = 0
Query: 11 VFSKALEIKNYLANGVN-CFKQLKHIHCR------LLRLHLDQDNYLLNTLLSSGLDSGC 70
+ S +E+ +Y + V+ F L+ +H +L+ + N + N+L++ L +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 71 TDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 130
D ++ VF + E ++ WN++I G VS + + V+ M G + T V
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 131 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 190
CA I LG +H++ VKA F + +LL +Y+KC +L++A VF +M D++VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 191 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 250
T++I GY G EA+ F+ + E G+ PD +++ VL+ CA+ G+ + +I +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 251 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 310
++FV+ +L+DMY KCG+M+ A L+F+ M KDI+SW+T+I GY+ N +AL L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 311 F-FQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYS 370
F ++ + PD + VL ACA L A D G + R+ + S+ + +L+DMY+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 371 KCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIG 430
KCG++ A +F + KD V W MI G M+G K +LF+ + + GI DE +F+
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 431 LLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQ 490
LL C+H G VDEG R+FN M+ + P++EHY C+VD+L R G L +A+R I +MP+
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 491 PNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIR 550
P+A +WGALL GCR+H D LAE+V +K+ ELEP N+G YVL++NIY+ + +WE+ +++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 551 SAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTE 610
+ ++ ++K GCSWIEI G V+ F+ GD S+ ++ I A L ++ + G+ P T+
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785
Query: 611 FVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLISKIT 670
+ L D EE EKE L HSEKLA+A G+ISS + +IRV KNLRVCGDCHE K +SK+T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 671 GREIIIRDTNRFHTFIDGSCSCKDYW 688
REI++RD+NRFH F DG CSC+ +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SR82 | 5.9e-238 | 56.75 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
Q9LN01 | 3.1e-170 | 43.24 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 1.5e-156 | 39.61 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LTV8 | 1.5e-156 | 40.45 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 1.2e-150 | 39.36 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GIB8 | 0.0e+00 | 100.00 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita mosc... | [more] |
A0A6J1I8T1 | 0.0e+00 | 98.40 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxi... | [more] |
A0A6J1CU24 | 0.0e+00 | 90.70 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Momordica char... | [more] |
A0A5D3DMV5 | 0.0e+00 | 88.95 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A1S3B518 | 0.0e+00 | 88.95 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucumis melo O... | [more] |
Match Name | E-value | Identity | Description | |
AT3G08820.1 | 4.2e-239 | 56.75 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 2.2e-171 | 43.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 1.1e-157 | 39.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G12770.1 | 1.1e-157 | 40.45 | mitochondrial editing factor 22 | [more] |
AT4G18750.1 | 8.7e-152 | 39.36 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |