CmoCh06G001990 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G001990
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat superfamily protein
LocationCmo_Chr06: 1082145 .. 1084208 (-)
RNA-Seq ExpressionCmoCh06G001990
SyntenyCmoCh06G001990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATCCTCACCAATCCTGCTTCACCCGTCTTCTCCAAAGCATTAGAGATCAAGAATTACCTCGCCAATGGCGTCAACTGCTTCAAGCAGCTCAAGCATATCCATTGCCGCCTTCTCCGCCTCCATCTCGACCAAGATAACTACCTTCTCAACACGCTTTTATCTAGCGGCTTGGATTCTGGTTGCACAGATTATTCTAAACTCGTATTTTCTCAAGCCAAAGAGCCCAATATTTTCCTATGGAACACGATGATTCGTGGCTTGGTTTCCAAGGATTGCTTCGACGATGCCATCGACGTTTATGGGTCGATGCGTAGAGAGGGGTTTTTACCCAATAATTTCACTTTCCCTTTTGTTTTAAAAGCTTGTGCTAGGAAATTGGATATTCGATTGGGAGTGAAGATTCACACTCTCGTGGTGAAAGCCGGTTTTGATTATGATGTGTTTGTGAAGACCAGTTTGCTTTCGTTGTATGCCAAATGTGATAATTTGGAGAATGCACTCAAGGTGTTCGACGATATGCCTGACAAAAATGTGGTCTCTTGGACTGCTATTATCACTGGATATATAGGCAGTGGACAGTTTAGAGAAGCCATTGATGCATTCAAGAGGTTGCTTGAAATGGGATTGAGGCCTGATAGCTTCTCTCTTGTCAAAGTTCTGTCTGCCTGCGCTCAGCTTGGGGATTTCACTAGTGGTGAGTGGATCGATAGATATATAAGTGATTGTGGCTTTGTTAGAAATGTTTTTGTAGCTACTTCTTTGTTGGATATGTATGTTAAATGTGGAAACATGGAGCGAGCTAATCTGATATTTAATGCTATGTCGGAGAAGGATATTGTTTCTTGGAGTACCATGATTCAAGGCTATGCTTTCAATGGATTGCCTAAACAAGCGCTTGATCTTTTCTTTCAAATGCAGTCTGAAAATTTGAAGCCTGATTGTTATGCAATGGTTGGTGTTCTGTCTGCTTGTGCAAGGCTAGGAGCTTTAGATTTAGGCATCTGGGCCAGCAGCCTGATGGATCGACACGAGTTCTTGTCGAATCCAGTCCTTGGTACTGCTTTAATCGACATGTACTCTAAATGTGGTAGTGTGACTCGAGCTTGGGAAATCTTCCGATCGATGGAGAAGAAAGACCGCGTAGTTTGGAACGCCATGATTGTCGGGCTGTCCATGAATGGGCACGCCAAAGCTGTGTTTTCATTGTTTAGCCTCGTGGGGAAGCATGGAATTCGGCCAGACGAAAACACCTTCATTGGCCTGCTCTGTGGGTGCACTCATGGCGGTTTTGTCGATGAGGGGCGTCGATATTTCAATAGCATGAAGCAGGTGTTCTCGTTGACCCCTTCGATTGAGCATTATGGATGTATGGTGGATTTGCTTGGGCGAGCAGGGTTATTAGACGAGGCTCACCGGTTGATAAACAGCATGCCAATGCAGCCTAATGCTGTTGTTTGGGGGGCCTTGTTGGGTGGATGTAGGTTGCATAGAGATTCCCACTTGGCTGAACAAGTACTAAAGAAGCTTATTGAGTTGGAGCCATGGAACTCAGGAAACTACGTTCTGTTGTCAAATATTTACTCTGCAAGTCATCGATGGGAGGAAGCTGAAAAGATCCGTTCAGCGATGAAGGAGCAGCGGATCCAGAAGATCCGTGGCTGCAGTTGGATCGAGATCGATGGGATCGTTCACGAGTTTCTAGTAGGAGACAAATCGCACTCGTTGTCCGACAAAATATATGCAAAACTTGATGAATTGGGGAGAGAATTGAAGGCAGCTGGTCATGTTCCAACTACAGAATTTGTTCTTTTCGACATAGAAGAGGAGGAGAAGGAACATTTCCTTGGTTGCCACAGTGAGAAGCTGGCTGTGGCATTTGGTTTGATAAGTTCTTCAAATCATGTTATTCGTGTTGTTAAAAACCTCCGTGTATGTGGTGATTGTCACGAGGCCATAAAGCTAATTTCCAAGATCACTGGAAGAGAGATCATCATAAGAGATACCAATCGGTTTCATACATTTATCGATGGTTCTTGCTCGTGTAAAGATTATTGGTGA

mRNA sequence

ATGTCCATCCTCACCAATCCTGCTTCACCCGTCTTCTCCAAAGCATTAGAGATCAAGAATTACCTCGCCAATGGCGTCAACTGCTTCAAGCAGCTCAAGCATATCCATTGCCGCCTTCTCCGCCTCCATCTCGACCAAGATAACTACCTTCTCAACACGCTTTTATCTAGCGGCTTGGATTCTGGTTGCACAGATTATTCTAAACTCGTATTTTCTCAAGCCAAAGAGCCCAATATTTTCCTATGGAACACGATGATTCGTGGCTTGGTTTCCAAGGATTGCTTCGACGATGCCATCGACGTTTATGGGTCGATGCGTAGAGAGGGGTTTTTACCCAATAATTTCACTTTCCCTTTTGTTTTAAAAGCTTGTGCTAGGAAATTGGATATTCGATTGGGAGTGAAGATTCACACTCTCGTGGTGAAAGCCGGTTTTGATTATGATGTGTTTGTGAAGACCAGTTTGCTTTCGTTGTATGCCAAATGTGATAATTTGGAGAATGCACTCAAGGTGTTCGACGATATGCCTGACAAAAATGTGGTCTCTTGGACTGCTATTATCACTGGATATATAGGCAGTGGACAGTTTAGAGAAGCCATTGATGCATTCAAGAGGTTGCTTGAAATGGGATTGAGGCCTGATAGCTTCTCTCTTGTCAAAGTTCTGTCTGCCTGCGCTCAGCTTGGGGATTTCACTAGTGGTGAGTGGATCGATAGATATATAAGTGATTGTGGCTTTGTTAGAAATGTTTTTGTAGCTACTTCTTTGTTGGATATGTATGTTAAATGTGGAAACATGGAGCGAGCTAATCTGATATTTAATGCTATGTCGGAGAAGGATATTGTTTCTTGGAGTACCATGATTCAAGGCTATGCTTTCAATGGATTGCCTAAACAAGCGCTTGATCTTTTCTTTCAAATGCAGTCTGAAAATTTGAAGCCTGATTGTTATGCAATGGTTGGTGTTCTGTCTGCTTGTGCAAGGCTAGGAGCTTTAGATTTAGGCATCTGGGCCAGCAGCCTGATGGATCGACACGAGTTCTTGTCGAATCCAGTCCTTGGTACTGCTTTAATCGACATGTACTCTAAATGTGGTAGTGTGACTCGAGCTTGGGAAATCTTCCGATCGATGGAGAAGAAAGACCGCGTAGTTTGGAACGCCATGATTGTCGGGCTGTCCATGAATGGGCACGCCAAAGCTGTGTTTTCATTGTTTAGCCTCGTGGGGAAGCATGGAATTCGGCCAGACGAAAACACCTTCATTGGCCTGCTCTGTGGGTGCACTCATGGCGGTTTTGTCGATGAGGGGCGTCGATATTTCAATAGCATGAAGCAGGTGTTCTCGTTGACCCCTTCGATTGAGCATTATGGATGTATGGTGGATTTGCTTGGGCGAGCAGGGTTATTAGACGAGGCTCACCGGTTGATAAACAGCATGCCAATGCAGCCTAATGCTGTTGTTTGGGGGGCCTTGTTGGGTGGATGTAGGTTGCATAGAGATTCCCACTTGGCTGAACAAGTACTAAAGAAGCTTATTGAGTTGGAGCCATGGAACTCAGGAAACTACGTTCTGTTGTCAAATATTTACTCTGCAAGTCATCGATGGGAGGAAGCTGAAAAGATCCGTTCAGCGATGAAGGAGCAGCGGATCCAGAAGATCCGTGGCTGCAGTTGGATCGAGATCGATGGGATCGTTCACGAGTTTCTAGTAGGAGACAAATCGCACTCGTTGTCCGACAAAATATATGCAAAACTTGATGAATTGGGGAGAGAATTGAAGGCAGCTGGTCATGTTCCAACTACAGAATTTGTTCTTTTCGACATAGAAGAGGAGGAGAAGGAACATTTCCTTGGTTGCCACAGTGAGAAGCTGGCTGTGGCATTTGGTTTGATAAGTTCTTCAAATCATGTTATTCGTGTTGTTAAAAACCTCCGTGTATGTGGTGATTGTCACGAGGCCATAAAGCTAATTTCCAAGATCACTGGAAGAGAGATCATCATAAGAGATACCAATCGGTTTCATACATTTATCGATGGTTCTTGCTCGTGTAAAGATTATTGGTGA

Coding sequence (CDS)

ATGTCCATCCTCACCAATCCTGCTTCACCCGTCTTCTCCAAAGCATTAGAGATCAAGAATTACCTCGCCAATGGCGTCAACTGCTTCAAGCAGCTCAAGCATATCCATTGCCGCCTTCTCCGCCTCCATCTCGACCAAGATAACTACCTTCTCAACACGCTTTTATCTAGCGGCTTGGATTCTGGTTGCACAGATTATTCTAAACTCGTATTTTCTCAAGCCAAAGAGCCCAATATTTTCCTATGGAACACGATGATTCGTGGCTTGGTTTCCAAGGATTGCTTCGACGATGCCATCGACGTTTATGGGTCGATGCGTAGAGAGGGGTTTTTACCCAATAATTTCACTTTCCCTTTTGTTTTAAAAGCTTGTGCTAGGAAATTGGATATTCGATTGGGAGTGAAGATTCACACTCTCGTGGTGAAAGCCGGTTTTGATTATGATGTGTTTGTGAAGACCAGTTTGCTTTCGTTGTATGCCAAATGTGATAATTTGGAGAATGCACTCAAGGTGTTCGACGATATGCCTGACAAAAATGTGGTCTCTTGGACTGCTATTATCACTGGATATATAGGCAGTGGACAGTTTAGAGAAGCCATTGATGCATTCAAGAGGTTGCTTGAAATGGGATTGAGGCCTGATAGCTTCTCTCTTGTCAAAGTTCTGTCTGCCTGCGCTCAGCTTGGGGATTTCACTAGTGGTGAGTGGATCGATAGATATATAAGTGATTGTGGCTTTGTTAGAAATGTTTTTGTAGCTACTTCTTTGTTGGATATGTATGTTAAATGTGGAAACATGGAGCGAGCTAATCTGATATTTAATGCTATGTCGGAGAAGGATATTGTTTCTTGGAGTACCATGATTCAAGGCTATGCTTTCAATGGATTGCCTAAACAAGCGCTTGATCTTTTCTTTCAAATGCAGTCTGAAAATTTGAAGCCTGATTGTTATGCAATGGTTGGTGTTCTGTCTGCTTGTGCAAGGCTAGGAGCTTTAGATTTAGGCATCTGGGCCAGCAGCCTGATGGATCGACACGAGTTCTTGTCGAATCCAGTCCTTGGTACTGCTTTAATCGACATGTACTCTAAATGTGGTAGTGTGACTCGAGCTTGGGAAATCTTCCGATCGATGGAGAAGAAAGACCGCGTAGTTTGGAACGCCATGATTGTCGGGCTGTCCATGAATGGGCACGCCAAAGCTGTGTTTTCATTGTTTAGCCTCGTGGGGAAGCATGGAATTCGGCCAGACGAAAACACCTTCATTGGCCTGCTCTGTGGGTGCACTCATGGCGGTTTTGTCGATGAGGGGCGTCGATATTTCAATAGCATGAAGCAGGTGTTCTCGTTGACCCCTTCGATTGAGCATTATGGATGTATGGTGGATTTGCTTGGGCGAGCAGGGTTATTAGACGAGGCTCACCGGTTGATAAACAGCATGCCAATGCAGCCTAATGCTGTTGTTTGGGGGGCCTTGTTGGGTGGATGTAGGTTGCATAGAGATTCCCACTTGGCTGAACAAGTACTAAAGAAGCTTATTGAGTTGGAGCCATGGAACTCAGGAAACTACGTTCTGTTGTCAAATATTTACTCTGCAAGTCATCGATGGGAGGAAGCTGAAAAGATCCGTTCAGCGATGAAGGAGCAGCGGATCCAGAAGATCCGTGGCTGCAGTTGGATCGAGATCGATGGGATCGTTCACGAGTTTCTAGTAGGAGACAAATCGCACTCGTTGTCCGACAAAATATATGCAAAACTTGATGAATTGGGGAGAGAATTGAAGGCAGCTGGTCATGTTCCAACTACAGAATTTGTTCTTTTCGACATAGAAGAGGAGGAGAAGGAACATTTCCTTGGTTGCCACAGTGAGAAGCTGGCTGTGGCATTTGGTTTGATAAGTTCTTCAAATCATGTTATTCGTGTTGTTAAAAACCTCCGTGTATGTGGTGATTGTCACGAGGCCATAAAGCTAATTTCCAAGATCACTGGAAGAGAGATCATCATAAGAGATACCAATCGGTTTCATACATTTATCGATGGTTCTTGCTCGTGTAAAGATTATTGGTGA

Protein sequence

MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW
Homology
BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match: Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 5.9e-238
Identity = 391/689 (56.75%), Postives = 515/689 (74.75%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNC-FKQLKHIHCRLLRLHLDQDNYLLNTLLSSGL 60
           MSI+T P++   SK  +IK  ++  V C    LK IH  L+  HL  D +L+N LL   L
Sbjct: 1   MSIVTVPSAT--SKVQQIKTLIS--VACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 60

Query: 61  DSGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPF 120
               T YS L+FS  + PNIFL+N++I G V+   F + +D++ S+R+ G   + FTFP 
Sbjct: 61  FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 120

Query: 121 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 180
           VLKAC R    +LG+ +H+LVVK GF++DV   TSLLS+Y+    L +A K+FD++PD++
Sbjct: 121 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 180

Query: 181 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 240
           VV+WTA+ +GY  SG+ REAID FK+++EMG++PDS+ +V+VLSAC  +GD  SGEWI +
Sbjct: 181 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 240

Query: 241 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQ 300
           Y+ +    +N FV T+L+++Y KCG ME+A  +F++M EKDIV+WSTMIQGYA N  PK+
Sbjct: 241 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 300

Query: 301 ALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALID 360
            ++LF QM  ENLKPD +++VG LS+CA LGALDLG W  SL+DRHEFL+N  +  ALID
Sbjct: 301 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 360

Query: 361 MYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENT 420
           MY+KCG++ R +E+F+ M++KD V+ NA I GL+ NGH K  F++F    K GI PD +T
Sbjct: 361 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 420

Query: 421 FIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSM 480
           F+GLLCGC H G + +G R+FN++  V++L  ++EHYGCMVDL GRAG+LD+A+RLI  M
Sbjct: 421 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 480

Query: 481 PMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAE 540
           PM+PNA+VWGALL GCRL +D+ LAE VLK+LI LEPWN+GNYV LSNIYS   RW+EA 
Sbjct: 481 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 540

Query: 541 KIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVP 600
           ++R  M ++ ++KI G SWIE++G VHEFL  DKSH LSDKIYAKL++LG E++  G VP
Sbjct: 541 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 600

Query: 601 TTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLIS 660
           TTEFV FD+EEEEKE  LG HSEKLAVA GLIS+ +  VIRVVKNLRVCGDCHE +KLIS
Sbjct: 601 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 660

Query: 661 KITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           KIT REI++RD NRFH F +GSCSC DYW
Sbjct: 661 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685

BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 3.1e-170
Identity = 304/703 (43.24%), Postives = 433/703 (61.59%), Query Frame = 0

Query: 22  LANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTD---YSKLVFSQAKEPN 81
           L +     + L+ IH +++++ L   NY L+ L+   + S   +   Y+  VF   +EPN
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 82  IFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHT 141
           + +WNTM RG         A+ +Y  M   G LPN++TFPFVLK+CA+    + G +IH 
Sbjct: 99  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158

Query: 142 LVVKAGFDYDVFVKTSLLSLYAKCDNL-------------------------------EN 201
            V+K G D D++V TSL+S+Y +   L                               EN
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218

Query: 202 ALKVFDDMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ 261
           A K+FD++P K+VVSW A+I+GY  +G ++EA++ FK +++  +RPD  ++V V+SACAQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 262 LGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTM 321
            G    G  +  +I D GF  N+ +  +L+D+Y KCG +E A  +F  +  KD++SW+T+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338

Query: 322 IQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRH-- 381
           I GY    L K+AL LF +M      P+   M+ +L ACA LGA+D+G W    +D+   
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398

Query: 382 EFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLF 441
              +   L T+LIDMY+KCG +  A ++F S+  K    WNAMI G +M+G A A F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458

Query: 442 SLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGR 501
           S + K GI+PD+ TF+GLL  C+H G +D GR  F +M Q + +TP +EHYGCM+DLLG 
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518

Query: 502 AGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLL 561
           +GL  EA  +IN M M+P+ V+W +LL  C++H +  L E   + LI++EP N G+YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578

Query: 562 SNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKL 621
           SNIY+++ RW E  K R+ + ++ ++K+ GCS IEID +VHEF++GDK H  + +IY  L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638

Query: 622 DELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSS-NHVIRVVKNL 681
           +E+   L+ AG VP T  VL ++EEE KE  L  HSEKLA+AFGLIS+     + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698

Query: 682 RVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           RVC +CHEA KLISKI  REII RD  RFH F DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.5e-156
Identity = 286/722 (39.61%), Postives = 427/722 (59.14%), Query Frame = 0

Query: 5   TNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLS-SGLDS-G 64
           +NP  P  +        L       +QLK  H  ++R     D Y  + L + + L S  
Sbjct: 19  SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78

Query: 65  CTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYG---SMRREGFLPNNFTFPF 124
             +Y++ VF +  +PN F WNT+IR   S    D  + ++     +      PN +TFPF
Sbjct: 79  SLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPF 138

Query: 125 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 184
           ++KA A    + LG  +H + VK+    DVFV  SL+  Y  C +L++A KVF  + +K+
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 198

Query: 185 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 244
           VVSW ++I G++  G   +A++ FK++    ++    ++V VLSACA++ +   G  +  
Sbjct: 199 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 258

Query: 245 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAF------ 304
           YI +     N+ +A ++LDMY KCG++E A  +F+AM EKD V+W+TM+ GYA       
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318

Query: 305 -------------------------NGLPKQALDLFFQMQ-SENLKPDCYAMVGVLSACA 364
                                    NG P +AL +F ++Q  +N+K +   +V  LSACA
Sbjct: 319 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 378

Query: 365 RLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNA 424
           ++GAL+LG W  S + +H    N  + +ALI MYSKCG + ++ E+F S+EK+D  VW+A
Sbjct: 379 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 438

Query: 425 MIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVF 484
           MI GL+M+G       +F  + +  ++P+  TF  + C C+H G VDE    F+ M+  +
Sbjct: 439 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 498

Query: 485 SLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQV 544
            + P  +HY C+VD+LGR+G L++A + I +MP+ P+  VWGALLG C++H + +LAE  
Sbjct: 499 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 558

Query: 545 LKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHE 604
             +L+ELEP N G +VLLSNIY+   +WE   ++R  M+   ++K  GCS IEIDG++HE
Sbjct: 559 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 618

Query: 605 FLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAV 664
           FL GD +H +S+K+Y KL E+  +LK+ G+ P    VL  IEEEE KE  L  HSEKLA+
Sbjct: 619 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 678

Query: 665 AFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKD 688
            +GLIS+ +  VIRV+KNLRVCGDCH   KLIS++  REII+RD  RFH F +G CSC D
Sbjct: 679 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 738

BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.5e-156
Identity = 267/660 (40.45%), Postives = 406/660 (61.52%), Query Frame = 0

Query: 31  QLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTDYSKLVFSQAKEPNIFLWNTMIRGLV 90
           QLK IH RLL L L    +L+  L+ +    G   +++ VF     P IF WN +IRG  
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 91  SKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHTLVVKAGFDYDVF 150
             + F DA+ +Y +M+     P++FTFP +LKAC+    +++G  +H  V + GFD DVF
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 151 VKTSLLSLYAKCDNLENALKVFD--DMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLE 210
           V+  L++LYAKC  L +A  VF+   +P++ +VSWTAI++ Y  +G+  EA++ F ++ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 211 MGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMER 270
           M ++PD  +LV VL+A   L D   G  I   +   G      +  SL  MY KCG +  
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 271 ANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACAR 330
           A ++F+ M   +++ W+ MI GYA NG  ++A+D+F +M +++++PD  ++   +SACA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 331 LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAM 390
           +G+L+        + R ++  +  + +ALIDM++KCGSV  A  +F     +D VVW+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 391 IVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFS 450
           IVG  ++G A+   SL+  + + G+ P++ TF+GLL  C H G V EG  +FN M     
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 455

Query: 451 LTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVL 510
           + P  +HY C++DLLGRAG LD+A+ +I  MP+QP   VWGALL  C+ HR   L E   
Sbjct: 456 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 515

Query: 511 KKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEF 570
           ++L  ++P N+G+YV LSN+Y+A+  W+   ++R  MKE+ + K  GCSW+E+ G +  F
Sbjct: 516 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 575

Query: 571 LVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAF 630
            VGDKSH   ++I  +++ +   LK  G V   +  L D+ +EE E  L  HSE++A+A+
Sbjct: 576 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 635

Query: 631 GLISSSNHV-IRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           GLIS+     +R+ KNLR C +CH A KLISK+  REI++RDTNRFH F DG CSC DYW
Sbjct: 636 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

BLAST of CmoCh06G001990 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.2e-150
Identity = 270/686 (39.36%), Postives = 418/686 (60.93%), Query Frame = 0

Query: 11  VFSKALEIKNYLANGVN-CFKQLKHIHCR------LLRLHLDQDNYLLNTLLSSGLDSGC 70
           + S  +E+ +Y  + V+  F  L+ +H        +L+    + N + N+L++  L +  
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245

Query: 71  TDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 130
            D ++ VF +  E ++  WN++I G VS    +  + V+  M   G   +  T   V   
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305

Query: 131 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 190
           CA    I LG  +H++ VKA F  +     +LL +Y+KC +L++A  VF +M D++VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365

Query: 191 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 250
           T++I GY   G   EA+  F+ + E G+ PD +++  VL+ CA+      G+ +  +I +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425

Query: 251 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 310
                ++FV+ +L+DMY KCG+M+ A L+F+ M  KDI+SW+T+I GY+ N    +AL L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485

Query: 311 F-FQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYS 370
           F   ++ +   PD   +  VL ACA L A D G      + R+ + S+  +  +L+DMY+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545

Query: 371 KCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIG 430
           KCG++  A  +F  +  KD V W  MI G  M+G  K   +LF+ + + GI  DE +F+ 
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605

Query: 431 LLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQ 490
           LL  C+H G VDEG R+FN M+    + P++EHY C+VD+L R G L +A+R I +MP+ 
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665

Query: 491 PNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIR 550
           P+A +WGALL GCR+H D  LAE+V +K+ ELEP N+G YVL++NIY+ + +WE+ +++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725

Query: 551 SAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTE 610
             + ++ ++K  GCSWIEI G V+ F+ GD S+  ++ I A L ++   +   G+ P T+
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785

Query: 611 FVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLISKIT 670
           + L D EE EKE  L  HSEKLA+A G+ISS +  +IRV KNLRVCGDCHE  K +SK+T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845

Query: 671 GREIIIRDTNRFHTFIDGSCSCKDYW 688
            REI++RD+NRFH F DG CSC+ +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871

BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match: A0A6J1GIB8 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita moschata OX=3662 GN=LOC111454160 PE=3 SV=1)

HSP 1 Score: 1417.5 bits (3668), Expect = 0.0e+00
Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
           MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60

Query: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
           SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV
Sbjct: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
           LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
           ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA
Sbjct: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
           YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
           IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
           IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKI 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKI
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSNHVIRVVKNLRVCGDCHEAIKLISKI 660

Query: 661 TGREIIIRDTNRFHTFIDGSCSCKDYW 688
           TGREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 TGREIIIRDTNRFHTFIDGSCSCKDYW 687

BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match: A0A6J1I8T1 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxima OX=3661 GN=LOC111470216 PE=3 SV=1)

HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 677/688 (98.40%), Postives = 681/688 (98.98%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
           MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLH DQDNYLLNTLLS GLD
Sbjct: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHFDQDNYLLNTLLSCGLD 60

Query: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
           SGCT+Y+KLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV
Sbjct: 61  SGCTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
           LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV
Sbjct: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240

Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
           ISDCG VRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA
Sbjct: 241 ISDCGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
           LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMD+HEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
           YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLV KHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
           IGLLCGCTHGGFVDEGRRYFNSMK+VFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP
Sbjct: 421 IGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480

Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
           IRSAMKEQRIQKIRGCSWIEI GIVHEFLVGDKSHSLSDKIYAKLDELGRELKA GHVPT
Sbjct: 541 IRSAMKEQRIQKIRGCSWIEIHGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS SNHVIRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           ITGREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688

BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match: A0A6J1CU24 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Momordica charantia OX=3673 GN=LOC111014228 PE=3 SV=1)

HSP 1 Score: 1296.6 bits (3354), Expect = 0.0e+00
Identity = 624/688 (90.70%), Postives = 655/688 (95.20%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
           M+ILTNP+SPVFSKALEIKNYL+NGV+CFK LK +H RLLRL LDQDNYLLN +L  GL 
Sbjct: 1   MTILTNPSSPVFSKALEIKNYLSNGVHCFKHLKQVHARLLRLDLDQDNYLLNIILCCGLH 60

Query: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
           S  T+Y+KLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRR+GFLPNNFTFPFV
Sbjct: 61  SNSTNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRRQGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
           LKACARK DIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDD+PDKNV
Sbjct: 121 LKACARKFDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ GDF SGEWIDRY
Sbjct: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQHGDFKSGEWIDRY 240

Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
           I+D G  RNVFVATSLLDMYVKCGNMERANLIF+AM EKDIVSWSTMIQGYAFNGLPKQA
Sbjct: 241 ITDSGLGRNVFVATSLLDMYVKCGNMERANLIFHAMPEKDIVSWSTMIQGYAFNGLPKQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
           LDLFFQM S+NLKPDCYAMVGVLSACARLGALDLG WAS+LMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMHSQNLKPDCYAMVGVLSACARLGALDLGNWASTLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
           Y+KCGSV RAWEIF++MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLV KHGI+PDENTF
Sbjct: 361 YTKCGSVARAWEIFQAMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIQPDENTF 420

Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
           IGLLCGCTHGGFV+EGR+YF+SMK+VFSLTPSIEHYGCMVDLLGRAG L EA +LINSMP
Sbjct: 421 IGLLCGCTHGGFVNEGRQYFDSMKRVFSLTPSIEHYGCMVDLLGRAGFLGEAQQLINSMP 480

Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGCRLHRD+HLAEQVL KLIELEPWNSGNYVLLSNIYSASHRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCRLHRDTHLAEQVLMKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540

Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
           IRS MKE RIQKIRGCSWIE+DGIVH+FLVGDKSHS S+KIYAKLDEL RELK AGH+PT
Sbjct: 541 IRSTMKEHRIQKIRGCSWIEVDGIVHQFLVGDKSHSFSEKIYAKLDELSRELKEAGHMPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLIS-SSNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLIS   NH+IRVVKNLRVCGDCHEAIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISFPKNHIIRVVKNLRVCGDCHEAIKLISK 660

Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           ITGREIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688

BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match: A0A5D3DMV5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00430 PE=3 SV=1)

HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 612/688 (88.95%), Postives = 653/688 (94.91%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
           M+ILTNP+SPVFSKAL+IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLN +L  GLD
Sbjct: 1   MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60

Query: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
            G TDY+KLVFSQ KEPNIFLWNTMIRGLVSKDCFDDAI +YGSMR  GFLPNNFTFPFV
Sbjct: 61  FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
           LKACARKLDIRLG+KIHTL+VKAG+D DVFVKTSLLSLY KCDNL++ALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYI SG FREAI AF++LLEMGL+PDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240

Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
           ISD G  RNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFNGLP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
           LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWASSLMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
           YSKCGSVTRAWEIFR+MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLV KHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
           IGLLCGCTHGGFV+EGR++FN+MK+VFSLTPSIEHYGCMVDLLGRAGLL+EAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480

Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGC+LH+D+HLAEQVLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540

Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
           IR  MKEQ+IQKIR CSWIEI+GIVHEFLVGD SHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+S  N VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660

Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688

BLAST of CmoCh06G001990 vs. ExPASy TrEMBL
Match: A0A1S3B518 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucumis melo OX=3656 GN=LOC103486253 PE=3 SV=1)

HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 612/688 (88.95%), Postives = 653/688 (94.91%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLD 60
           M+ILTNP+SPVFSKAL+IKNYL+NGVN FKQLKHIH RLLRLHL QDNYLLN +L  GLD
Sbjct: 1   MTILTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLD 60

Query: 61  SGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFV 120
            G TDY+KLVFSQ KEPNIFLWNTMIRGLVSKDCFDDAI +YGSMR  GFLPNNFTFPFV
Sbjct: 61  FGSTDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFV 120

Query: 121 LKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNV 180
           LKACARKLDIRLG+KIHTL+VKAG+D DVFVKTSLLSLY KCDNL++ALKVFDD+PDKNV
Sbjct: 121 LKACARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNV 180

Query: 181 VSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRY 240
           VSWTAIITGYI SG FREAI AF++LLEMGL+PDSFSLVKVL+ACA+LGDFTSGEWIDRY
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRY 240

Query: 241 ISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQA 300
           ISD G  RNVFVATSLLDMYVKCGN+ERANLIF+AM EKD+VSWSTMIQGYAFNGLP+QA
Sbjct: 241 ISDNGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQA 300

Query: 301 LDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360
           LDLFFQMQSENLKPDCY MVGVLSACA LGALDLGIWASSLMDRHEFLSNPVLGTALIDM
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDM 360

Query: 361 YSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTF 420
           YSKCGSVTRAWEIFR+MEKKDRVVWNAM+VGLSMNGHAKAVFSLFSLV KHGIRPDENTF
Sbjct: 361 YSKCGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 421 IGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMP 480
           IGLLCGCTHGGFV+EGR++FN+MK+VFSLTPSIEHYGCMVDLLGRAGLL+EAH+LIN MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMP 480

Query: 481 MQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEK 540
           M+PNAVVWGALLGGC+LH+D+HLAEQVLKKLIELEPWNSGNYVLLSNIYSA+HRWEEAEK
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEK 540

Query: 541 IRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPT 600
           IR  MKEQ+IQKIR CSWIEI+GIVHEFLVGD SHSLS+KIYAKLDELGRELKA GHVPT
Sbjct: 541 IRLTMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPT 600

Query: 601 TEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISK 660
           TEFVLFDIEEEEKEHFLG HSEKLAVAFGLI+S  N VIRVVKNLRVCGDCH+AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISK 660

Query: 661 ITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           IT REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCKDYW 688

BLAST of CmoCh06G001990 vs. TAIR 10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 825.1 bits (2130), Expect = 4.2e-239
Identity = 391/689 (56.75%), Postives = 515/689 (74.75%), Query Frame = 0

Query: 1   MSILTNPASPVFSKALEIKNYLANGVNC-FKQLKHIHCRLLRLHLDQDNYLLNTLLSSGL 60
           MSI+T P++   SK  +IK  ++  V C    LK IH  L+  HL  D +L+N LL   L
Sbjct: 1   MSIVTVPSAT--SKVQQIKTLIS--VACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 60

Query: 61  DSGCTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPF 120
               T YS L+FS  + PNIFL+N++I G V+   F + +D++ S+R+ G   + FTFP 
Sbjct: 61  FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 120

Query: 121 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 180
           VLKAC R    +LG+ +H+LVVK GF++DV   TSLLS+Y+    L +A K+FD++PD++
Sbjct: 121 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 180

Query: 181 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 240
           VV+WTA+ +GY  SG+ REAID FK+++EMG++PDS+ +V+VLSAC  +GD  SGEWI +
Sbjct: 181 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 240

Query: 241 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQ 300
           Y+ +    +N FV T+L+++Y KCG ME+A  +F++M EKDIV+WSTMIQGYA N  PK+
Sbjct: 241 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 300

Query: 301 ALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALID 360
            ++LF QM  ENLKPD +++VG LS+CA LGALDLG W  SL+DRHEFL+N  +  ALID
Sbjct: 301 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 360

Query: 361 MYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENT 420
           MY+KCG++ R +E+F+ M++KD V+ NA I GL+ NGH K  F++F    K GI PD +T
Sbjct: 361 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 420

Query: 421 FIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSM 480
           F+GLLCGC H G + +G R+FN++  V++L  ++EHYGCMVDL GRAG+LD+A+RLI  M
Sbjct: 421 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 480

Query: 481 PMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAE 540
           PM+PNA+VWGALL GCRL +D+ LAE VLK+LI LEPWN+GNYV LSNIYS   RW+EA 
Sbjct: 481 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 540

Query: 541 KIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVP 600
           ++R  M ++ ++KI G SWIE++G VHEFL  DKSH LSDKIYAKL++LG E++  G VP
Sbjct: 541 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 600

Query: 601 TTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLIS 660
           TTEFV FD+EEEEKE  LG HSEKLAVA GLIS+ +  VIRVVKNLRVCGDCHE +KLIS
Sbjct: 601 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 660

Query: 661 KITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           KIT REI++RD NRFH F +GSCSC DYW
Sbjct: 661 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685

BLAST of CmoCh06G001990 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 600.1 bits (1546), Expect = 2.2e-171
Identity = 304/703 (43.24%), Postives = 433/703 (61.59%), Query Frame = 0

Query: 22  LANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTD---YSKLVFSQAKEPN 81
           L +     + L+ IH +++++ L   NY L+ L+   + S   +   Y+  VF   +EPN
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 82  IFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHT 141
           + +WNTM RG         A+ +Y  M   G LPN++TFPFVLK+CA+    + G +IH 
Sbjct: 99  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158

Query: 142 LVVKAGFDYDVFVKTSLLSLYAKCDNL-------------------------------EN 201
            V+K G D D++V TSL+S+Y +   L                               EN
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218

Query: 202 ALKVFDDMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ 261
           A K+FD++P K+VVSW A+I+GY  +G ++EA++ FK +++  +RPD  ++V V+SACAQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 262 LGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTM 321
            G    G  +  +I D GF  N+ +  +L+D+Y KCG +E A  +F  +  KD++SW+T+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338

Query: 322 IQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRH-- 381
           I GY    L K+AL LF +M      P+   M+ +L ACA LGA+D+G W    +D+   
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398

Query: 382 EFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLF 441
              +   L T+LIDMY+KCG +  A ++F S+  K    WNAMI G +M+G A A F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458

Query: 442 SLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGR 501
           S + K GI+PD+ TF+GLL  C+H G +D GR  F +M Q + +TP +EHYGCM+DLLG 
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518

Query: 502 AGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLL 561
           +GL  EA  +IN M M+P+ V+W +LL  C++H +  L E   + LI++EP N G+YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578

Query: 562 SNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKL 621
           SNIY+++ RW E  K R+ + ++ ++K+ GCS IEID +VHEF++GDK H  + +IY  L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638

Query: 622 DELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSS-NHVIRVVKNL 681
           +E+   L+ AG VP T  VL ++EEE KE  L  HSEKLA+AFGLIS+     + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698

Query: 682 RVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           RVC +CHEA KLISKI  REII RD  RFH F DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh06G001990 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-157
Identity = 286/722 (39.61%), Postives = 427/722 (59.14%), Query Frame = 0

Query: 5   TNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLS-SGLDS-G 64
           +NP  P  +        L       +QLK  H  ++R     D Y  + L + + L S  
Sbjct: 19  SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78

Query: 65  CTDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYG---SMRREGFLPNNFTFPF 124
             +Y++ VF +  +PN F WNT+IR   S    D  + ++     +      PN +TFPF
Sbjct: 79  SLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPF 138

Query: 125 VLKACARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKN 184
           ++KA A    + LG  +H + VK+    DVFV  SL+  Y  C +L++A KVF  + +K+
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 198

Query: 185 VVSWTAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDR 244
           VVSW ++I G++  G   +A++ FK++    ++    ++V VLSACA++ +   G  +  
Sbjct: 199 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 258

Query: 245 YISDCGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAF------ 304
           YI +     N+ +A ++LDMY KCG++E A  +F+AM EKD V+W+TM+ GYA       
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318

Query: 305 -------------------------NGLPKQALDLFFQMQ-SENLKPDCYAMVGVLSACA 364
                                    NG P +AL +F ++Q  +N+K +   +V  LSACA
Sbjct: 319 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 378

Query: 365 RLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNA 424
           ++GAL+LG W  S + +H    N  + +ALI MYSKCG + ++ E+F S+EK+D  VW+A
Sbjct: 379 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 438

Query: 425 MIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVF 484
           MI GL+M+G       +F  + +  ++P+  TF  + C C+H G VDE    F+ M+  +
Sbjct: 439 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 498

Query: 485 SLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQV 544
            + P  +HY C+VD+LGR+G L++A + I +MP+ P+  VWGALLG C++H + +LAE  
Sbjct: 499 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 558

Query: 545 LKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHE 604
             +L+ELEP N G +VLLSNIY+   +WE   ++R  M+   ++K  GCS IEIDG++HE
Sbjct: 559 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 618

Query: 605 FLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAV 664
           FL GD +H +S+K+Y KL E+  +LK+ G+ P    VL  IEEEE KE  L  HSEKLA+
Sbjct: 619 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 678

Query: 665 AFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKD 688
            +GLIS+ +  VIRV+KNLRVCGDCH   KLIS++  REII+RD  RFH F +G CSC D
Sbjct: 679 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 738

BLAST of CmoCh06G001990 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-157
Identity = 267/660 (40.45%), Postives = 406/660 (61.52%), Query Frame = 0

Query: 31  QLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGCTDYSKLVFSQAKEPNIFLWNTMIRGLV 90
           QLK IH RLL L L    +L+  L+ +    G   +++ VF     P IF WN +IRG  
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 91  SKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKACARKLDIRLGVKIHTLVVKAGFDYDVF 150
             + F DA+ +Y +M+     P++FTFP +LKAC+    +++G  +H  V + GFD DVF
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 151 VKTSLLSLYAKCDNLENALKVFD--DMPDKNVVSWTAIITGYIGSGQFREAIDAFKRLLE 210
           V+  L++LYAKC  L +A  VF+   +P++ +VSWTAI++ Y  +G+  EA++ F ++ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 211 MGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDCGFVRNVFVATSLLDMYVKCGNMER 270
           M ++PD  +LV VL+A   L D   G  I   +   G      +  SL  MY KCG +  
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 271 ANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENLKPDCYAMVGVLSACAR 330
           A ++F+ M   +++ W+ MI GYA NG  ++A+D+F +M +++++PD  ++   +SACA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 331 LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVTRAWEIFRSMEKKDRVVWNAM 390
           +G+L+        + R ++  +  + +ALIDM++KCGSV  A  +F     +D VVW+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 391 IVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGLLCGCTHGGFVDEGRRYFNSMKQVFS 450
           IVG  ++G A+   SL+  + + G+ P++ TF+GLL  C H G V EG  +FN M     
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 455

Query: 451 LTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQPNAVVWGALLGGCRLHRDSHLAEQVL 510
           + P  +HY C++DLLGRAG LD+A+ +I  MP+QP   VWGALL  C+ HR   L E   
Sbjct: 456 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 515

Query: 511 KKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRSAMKEQRIQKIRGCSWIEIDGIVHEF 570
           ++L  ++P N+G+YV LSN+Y+A+  W+   ++R  MKE+ + K  GCSW+E+ G +  F
Sbjct: 516 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 575

Query: 571 LVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAF 630
            VGDKSH   ++I  +++ +   LK  G V   +  L D+ +EE E  L  HSE++A+A+
Sbjct: 576 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 635

Query: 631 GLISSSNHV-IRVVKNLRVCGDCHEAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 688
           GLIS+     +R+ KNLR C +CH A KLISK+  REI++RDTNRFH F DG CSC DYW
Sbjct: 636 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

BLAST of CmoCh06G001990 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 535.0 bits (1377), Expect = 8.7e-152
Identity = 270/686 (39.36%), Postives = 418/686 (60.93%), Query Frame = 0

Query: 11  VFSKALEIKNYLANGVN-CFKQLKHIHCR------LLRLHLDQDNYLLNTLLSSGLDSGC 70
           + S  +E+ +Y  + V+  F  L+ +H        +L+    + N + N+L++  L +  
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245

Query: 71  TDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 130
            D ++ VF +  E ++  WN++I G VS    +  + V+  M   G   +  T   V   
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305

Query: 131 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 190
           CA    I LG  +H++ VKA F  +     +LL +Y+KC +L++A  VF +M D++VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365

Query: 191 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 250
           T++I GY   G   EA+  F+ + E G+ PD +++  VL+ CA+      G+ +  +I +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425

Query: 251 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 310
                ++FV+ +L+DMY KCG+M+ A L+F+ M  KDI+SW+T+I GY+ N    +AL L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485

Query: 311 F-FQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYS 370
           F   ++ +   PD   +  VL ACA L A D G      + R+ + S+  +  +L+DMY+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545

Query: 371 KCGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIG 430
           KCG++  A  +F  +  KD V W  MI G  M+G  K   +LF+ + + GI  DE +F+ 
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605

Query: 431 LLCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQ 490
           LL  C+H G VDEG R+FN M+    + P++EHY C+VD+L R G L +A+R I +MP+ 
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665

Query: 491 PNAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIR 550
           P+A +WGALL GCR+H D  LAE+V +K+ ELEP N+G YVL++NIY+ + +WE+ +++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725

Query: 551 SAMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTE 610
             + ++ ++K  GCSWIEI G V+ F+ GD S+  ++ I A L ++   +   G+ P T+
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785

Query: 611 FVLFDIEEEEKEHFLGCHSEKLAVAFGLISSSN-HVIRVVKNLRVCGDCHEAIKLISKIT 670
           + L D EE EKE  L  HSEKLA+A G+ISS +  +IRV KNLRVCGDCHE  K +SK+T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845

Query: 671 GREIIIRDTNRFHTFIDGSCSCKDYW 688
            REI++RD+NRFH F DG CSC+ +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SR825.9e-23856.75Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... [more]
Q9LN013.1e-17043.24Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823801.5e-15639.61Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LTV81.5e-15640.45Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9SN391.2e-15039.36Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1GIB80.0e+00100.00putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita mosc... [more]
A0A6J1I8T10.0e+0098.40putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxi... [more]
A0A6J1CU240.0e+0090.70putative pentatricopeptide repeat-containing protein At3g08820 OS=Momordica char... [more]
A0A5D3DMV50.0e+0088.95Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3B5180.0e+0088.95putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucumis melo O... [more]
Match NameE-valueIdentityDescription
AT3G08820.14.2e-23956.75Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.12.2e-17143.24Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.11.1e-15739.61Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.11.1e-15740.45mitochondrial editing factor 22 [more]
AT4G18750.18.7e-15239.36Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 236..333
e-value: 3.2E-22
score: 80.7
coord: 124..235
e-value: 8.1E-24
score: 86.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 17..123
e-value: 2.8E-12
score: 48.6
coord: 353..575
e-value: 1.6E-42
score: 147.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 159..540
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 77..126
e-value: 1.9E-11
score: 44.0
coord: 279..328
e-value: 3.1E-9
score: 36.9
coord: 178..226
e-value: 5.7E-8
score: 32.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 383..417
e-value: 0.0026
score: 15.8
coord: 282..316
e-value: 3.8E-6
score: 24.7
coord: 81..113
e-value: 6.5E-9
score: 33.4
coord: 181..215
e-value: 5.8E-6
score: 24.2
coord: 355..381
e-value: 4.9E-4
score: 18.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 455..479
e-value: 0.015
score: 15.5
coord: 383..413
e-value: 0.022
score: 15.0
coord: 355..380
e-value: 0.0013
score: 18.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 381..415
score: 9.678885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 350..380
score: 8.769097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 78..112
score: 11.629997
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 280..314
score: 11.805378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 179..213
score: 11.684803
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 555..676
e-value: 1.4E-41
score: 141.3
NoneNo IPR availablePANTHERPTHR47924:SF28PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATEDcoord: 14..680
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 14..680

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G001990.1CmoCh06G001990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding