CmoCh06G001600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G001600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CM0216.310.nc protein
Location	Cmo_Chr06: 855591 .. 859782 (-)
RNA-Seq Expression	CmoCh06G001600
Synteny	CmoCh06G001600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAGTCCTAATGGCCGCCTTCACAGCAGCCAGCAGGTGTTCTTGACGAGTGATTATTGCGGGAATCGCTGATTGCTATTAGTTCCTCTTACCTTTAGATTCACTCTCTCAATTAGGCATTCTGGATCATCGCTTATTTTCTCGCCCCCAATCGCTACCATTGTTGGGCTGACCTTTTCTGCTTTAATCTCAGATTTTTGGTCCAGATGTCCAGGTAACACTCCTCTATTTTGTAGATCTATGATGGTTCTTTGAATTCATTTTTCCAGTTCCAAATTGTATCCATTTTTGCATTTAATTAACGTAGTATCTCACTTATATGGTCTACTGGTTTGAGATTTCACTTTCTGATTTGAATCCCTTCAATGATAATGATTTTTGCTTATAATTTATGGTGAATGTTTAAATCGAAGTTTATCCTTTCTTTTGTTGTCTATTCAAACCTAAACTGAAAGGTATAGTAGTCTTTTGGAAGAGCTGAGAACGGATCCGGTTGGTTTTGTTACTGAGAAGTTCAGTTGTGAATTGTAACTTGGAGGAGTGTGAAGGGATGAAAAGGAGAAGTTGATCGTTTAAAATTGATTTGGAAGAAGTCTATGATCATGCTAATTGCTAGTTTCCTCAAGCCATGTTGAGGAAAAAGGGTTTTGGGTCTAGATGGAACTCCAACTCCAGCTAAATTCTTGATTTTCACGAGTGAGAGGTCAAGATTTTAGCTATTAGAGGTCTGAGACAGCCTGGGAGATCCTACTTAGTACTTTCAACTTTTAGTTTGTGTTGACTGGTGTGATGTCCCACATTAGTTGGAGAGGAGAACAAACCACCATTTCTAAGGGTGTGGAAACCTTACTCTAGCAGACGCGTTTTAAAGCCTTGAGGAGAAGCCCGAAACAGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTCGATCTGGGTCGTTACAACTGGTGACAGTGTAAGCAGGCTGATTAATCAGGGGATGCAGGCATATAGGATTTTCAGTTTCTAGCAACAGATTATTCAGTATAGATTAGGTTGCTGTAGGATTAGAATGGGTTTCTGAACAAGGTAGCTCTGAGAGTTGTAGCATTTCCCTAAGAAGGGGACTTTTATATCTGTTCTTTCTCTTCTAAAGGATCAGCAGGATTCCCAGAGATTTGTTTTAGGATGGATAGGGAGAGGGAAAATATAGTCACTTGGTGAGATGATACTTCGAGCTGGTGGAATGGGTTGTTATTGGCAATATGAGAATTGTGGCCAAGTGGATTTGAGTGGTATTGGCAAAGACGAGAGTTGTGGCTAAGTGGATTAGGGAGGTATTGGCAAAATGAGAATGAGAAATGAAGTATTATTCGCCAAGTAAATACTTTAATTGTAACGGCCCAAGCTTACCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTAGGCTTTCCCTCAAGGTTTTTAAAATGTGTCTACTAGGGAGAGGTTTCCACACCCTTGTAAAAAACACGCTTCGTTCTCTAGGTGGGGGAGAAGGATTAGCAAATATAGTTTTTCTAGAACCTTTTTTCTTATTTGGTTGTTGTTGTTTGTTATTATCATTCACCTAATTACACTTTTTTCTAAATGAATTGAAATAAATGATAGTAAAGTATTTTTTATTAACTCTAATTCATATCTCATGCATGAAGATTCTACAGCTACACTACCCCTTTCAAAATTCAAATGTCTTTGGACATTTGTTCACGTGTGCTTTATTTGGTACATTTGTAGAAAATAATTTGAAGGTTGGACTTCAAAACAAAGAATAGCCATGAGTGGAGAACATCTGAATCCAATTCCTTTGGAGAGTCGACCTGGCATCCTTTTCGTTGGATCATCAAACGTTGGCAAGCGCTCCCTTCTCTCAAGTAATTCTCTTTCTCTTACATTGCTAAATTCAATCTATTTAATTCTTACTTGTTGCAATTAAGTTGATTATTATCATGCTCGTTGAGAGTCTGTGTATACCGTACGAGTGGTTTCGGGAATTGAAATTCTCAATTACTACAATCATCATATGCTATAACAAATGATGAGATTTTCTTCTCAAATTTCTCAACATCACAACATCAGAGAATATTCTCTCTCTCTCTATTGTTTTGGTACATAAGCTCAAGTACAATCTCGTCTTTTTCGATCTACTTGTAAATTTTTATTAGAGAAAAGTGGCCACAATTTCATAGAAGAAAAACTTGTATTTGCTAGTTATCTGTTTTTTTTTTTCCTTTAACATGTAATTTTCCCTTGCGACTAATGTTGTAAGTTAGTGGGATTGTGTTAGATATATGTCTTGACATTCATGGTTTATAAAAGAAGCATAACACTCGGTAGTTGCATCAGAGAAACTGATCATTTTGAGTATTCAATGTCTTTCTGTTAATCGTAGGATTACTTTCTGTGGACTTTGAAGATGCTATGGATTCGTCCACTCAAGTTTCGGTCCATGGGTAAGTGACTGAAAGAAAATTTCATTTTTCTTCTTACGTATCAACGTATCTTTCTATGTAGTTGGTCAAAATGAAAACTACTAGCATTTTCTAGGTCACTCACTGTAAATTTGAGCTCGAAATGGCTTTTTATTTTTCCTTGACAAACAGTTGGACCATCGACACACAATATTACACAGCCGATGTCTCTGTATCGGTGGCTCATTTGGACGAGCAATTTTCCATCGAGGCTTTGCCTACATTCAATCAGTTGGCTGCCCTGGTCATGGTCTTCGACATGAATGATGTTAGTTCTTTCTATTTTAAGTTTCTTAACTGCAATTGTAATAATCAATATTTTTGTTGATATCATATGTTCGTATGCCTACTACGCTTTTTTTTCATTGCAGCTTTCATCTCATGCGACACTCCGGGATTGGGTCGCTCATGCTGATCTACAGAAATTTGATGTATTATTATGCATAGGAAATAAAGTAGATCTTGTTCCAGGTCATCCAGTTCATGCTGAGTACAGAAAATTTCTGCAAAAGCAGAGACTTAAAGACTCTTGTACAGATTATTCAGATACAGTCGAATATGGAATTTCTGAAATTGAAGGAAGTAGTTTATTGGGAGACGAAGATCCCTCGTGGGAAACTAGGAGGTCGTGTTTGGAGTGGTGCGTTGAACGCAATATCGAGTTCATTGAAGCGTGTGCGTCTAATGCAGATTTTGACAAATGTAAGTTAGTCCTAGCGTTGGCTTGGATTCTCTGTTTATATGGCAACGAATTATGAGAACATCGAAGCGCAAAGAATTTCGACCACGTTTTTCCTTTATCTGCTTGGAACAAAATTAATCTGTTCATTTTTTATAGCATGAATCCAGTGTCACATTCATCCTCGTCTTGTTTTTGTTTTTCTATGACATAACTATACTATTATCTACAGGTTTATCAATTGATGGTGATATACAAGGAGTTCAAAGGCTCTATGGTGCTCTTTCTGCTCATATGTGGCCTGGAATGATTCTAAAATCTGGAGATAAGATAACAAAGCCATCATTTCCAAAAGAAGAAGGTCTTTTGCATTACATTAATCTTAGTTAGTACAATGTTTCATCTATTAGTTTAAGGTCTAAGTATCTGCCTCCATTGTTTTATCCAATCAGAATTGTCGGAAGAAGAATCCGATATTGAAATTGACTACGAAAAACTATCCGAGGGTTCTGCCGAACCGTGGGACGACACAGATTTCAAGGGTTGCTCGTCGAATGGAGAAGGTTCTTCCATAGACACCGGAGCTCATCCAAAGGAAGCCGACAATGCCGAGCAAGATCAAGCATGTCAAAATACCCGTGATCAGGCAGAGGCTGAAGAAAACGCGGTGGCCACTAACGGAGAACATGTCGAATGCAAGGGAAAACATCATGATGTTGAGGATTTAGAACGGTTGATGTGTGAGATAGGGAACATGCGGGACAGCTTGAGGTTGATGCCTGATTTTCAAAGAAGAGAAATGGCTGCAAACTTGGCGCTGAAAATGGCGGCCATGTTTGGTGGAAGTAGTGACGATGAAGAGGAAACTGCCGCCATGGAGTAGTGATTCTGAGCTGGGAATGGTTTATCCTCTTCAATCTTGTGTTCCTCAATTCCTTCAGTCAATGTATGTTTGACAGCTTAGTTTTATTTAATCATGTTCTTAGTTTTATTTAATCATGTTCTTAGTTTGTTAATC

mRNA sequence

CTCAAGTCCTAATGGCCGCCTTCACAGCAGCCAGCAGGTGTTCTTGACGAGTGATTATTGCGGGAATCGCTGATTGCTATTAGTTCCTCTTACCTTTAGATTCACTCTCTCAATTAGGCATTCTGGATCATCGCTTATTTTCTCGCCCCCAATCGCTACCATTGTTGGGCTGACCTTTTCTGCTTTAATCTCAGATTTTTGGTCCAGATGTCCAGAAAATAATTTGAAGGTTGGACTTCAAAACAAAGAATAGCCATGAGTGGAGAACATCTGAATCCAATTCCTTTGGAGAGTCGACCTGGCATCCTTTTCGTTGGATCATCAAACGTTGGCAAGCGCTCCCTTCTCTCAAGATTACTTTCTGTGGACTTTGAAGATGCTATGGATTCGTCCACTCAAGTTTCGGTCCATGGTTGGACCATCGACACACAATATTACACAGCCGATGTCTCTGTATCGGTGGCTCATTTGGACGAGCAATTTTCCATCGAGGCTTTGCCTACATTCAATCAGTTGGCTGCCCTGGTCATGGTCTTCGACATGAATGATCTTTCATCTCATGCGACACTCCGGGATTGGGTCGCTCATGCTGATCTACAGAAATTTGATGTATTATTATGCATAGGAAATAAAGTAGATCTTGTTCCAGGTCATCCAGTTCATGCTGAGTACAGAAAATTTCTGCAAAAGCAGAGACTTAAAGACTCTTGTACAGATTATTCAGATACAGTCGAATATGGAATTTCTGAAATTGAAGGAAGTAGTTTATTGGGAGACGAAGATCCCTCGTGGGAAACTAGGAGGTCGTGTTTGGAGTGGTGCGTTGAACGCAATATCGAGTTCATTGAAGCGTGTGCGTCTAATGCAGATTTTGACAAATGTTTATCAATTGATGGTGATATACAAGGAGTTCAAAGGCTCTATGGTGCTCTTTCTGCTCATATGTGGCCTGGAATGATTCTAAAATCTGGAGATAAGATAACAAAGCCATCATTTCCAAAAGAAGAAGGTCTTTTGCATTACATTAATCTTAAATTGTCGGAAGAAGAATCCGATATTGAAATTGACTACGAAAAACTATCCGAGGGTTCTGCCGAACCGTGGGACGACACAGATTTCAAGGGTTGCTCGTCGAATGGAGAAGGTTCTTCCATAGACACCGGAGCTCATCCAAAGGAAGCCGACAATGCCGAGCAAGATCAAGCATGTCAAAATACCCGTGATCAGGCAGAGGCTGAAGAAAACGCGGTGGCCACTAACGGAGAACATGTCGAATGCAAGGGAAAACATCATGATGTTGAGGATTTAGAACGGTTGATGTGTGAGATAGGGAACATGCGGGACAGCTTGAGGTTGATGCCTGATTTTCAAAGAAGAGAAATGGCTGCAAACTTGGCGCTGAAAATGGCGGCCATGTTTGGTGGAAGTAGTGACGATGAAGAGGAAACTGCCGCCATGGAGTAGTGATTCTGAGCTGGGAATGGTTTATCCTCTTCAATCTTGTGTTCCTCAATTCCTTCAGTCAATGTATGTTTGACAGCTTAGTTTTATTTAATCATGTTCTTAGTTTTATTTAATCATGTTCTTAGTTTGTTAATC

Coding sequence (CDS)

ATGAGTGGAGAACATCTGAATCCAATTCCTTTGGAGAGTCGACCTGGCATCCTTTTCGTTGGATCATCAAACGTTGGCAAGCGCTCCCTTCTCTCAAGATTACTTTCTGTGGACTTTGAAGATGCTATGGATTCGTCCACTCAAGTTTCGGTCCATGGTTGGACCATCGACACACAATATTACACAGCCGATGTCTCTGTATCGGTGGCTCATTTGGACGAGCAATTTTCCATCGAGGCTTTGCCTACATTCAATCAGTTGGCTGCCCTGGTCATGGTCTTCGACATGAATGATCTTTCATCTCATGCGACACTCCGGGATTGGGTCGCTCATGCTGATCTACAGAAATTTGATGTATTATTATGCATAGGAAATAAAGTAGATCTTGTTCCAGGTCATCCAGTTCATGCTGAGTACAGAAAATTTCTGCAAAAGCAGAGACTTAAAGACTCTTGTACAGATTATTCAGATACAGTCGAATATGGAATTTCTGAAATTGAAGGAAGTAGTTTATTGGGAGACGAAGATCCCTCGTGGGAAACTAGGAGGTCGTGTTTGGAGTGGTGCGTTGAACGCAATATCGAGTTCATTGAAGCGTGTGCGTCTAATGCAGATTTTGACAAATGTTTATCAATTGATGGTGATATACAAGGAGTTCAAAGGCTCTATGGTGCTCTTTCTGCTCATATGTGGCCTGGAATGATTCTAAAATCTGGAGATAAGATAACAAAGCCATCATTTCCAAAAGAAGAAGGTCTTTTGCATTACATTAATCTTAAATTGTCGGAAGAAGAATCCGATATTGAAATTGACTACGAAAAACTATCCGAGGGTTCTGCCGAACCGTGGGACGACACAGATTTCAAGGGTTGCTCGTCGAATGGAGAAGGTTCTTCCATAGACACCGGAGCTCATCCAAAGGAAGCCGACAATGCCGAGCAAGATCAAGCATGTCAAAATACCCGTGATCAGGCAGAGGCTGAAGAAAACGCGGTGGCCACTAACGGAGAACATGTCGAATGCAAGGGAAAACATCATGATGTTGAGGATTTAGAACGGTTGATGTGTGAGATAGGGAACATGCGGGACAGCTTGAGGTTGATGCCTGATTTTCAAAGAAGAGAAATGGCTGCAAACTTGGCGCTGAAAATGGCGGCCATGTTTGGTGGAAGTAGTGACGATGAAGAGGAAACTGCCGCCATGGAGTAG

Protein sequence

MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQYYTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVLLCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSWETRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGDKITKPSFPKEEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSIDTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVECKGKHHDVEDLERLMCEIGNMRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEETAAME

Homology

[Close]

BLAST of CmoCh06G001600 vs. ExPASy TrEMBL
Match: A0A6J1F587 (uncharacterized protein LOC111440972 OS=Cucurbita moschata OX=3662 GN=LOC111440972 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.3e-223
Identity = 393/402 (97.76%), Postives = 394/402 (98.01%), Query Frame = 0


Query: 1   MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQY 60
           MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQY
Sbjct: 1   MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQY 60

Query: 61  YTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVL 120
           YTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVL
Sbjct: 61  YTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVL 120

Query: 121 LCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSWE 180
           LCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSWE
Sbjct: 121 LCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSWE 180

Query: 181 TRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGD 240
           TRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGD
Sbjct: 181 TRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGD 240

Query: 241 KITKPSFPKEEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSI 300
           KITKPSFPKEE        +LSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSI
Sbjct: 241 KITKPSFPKEE--------ELSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSI 300

Query: 301 DTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVECKGKHHDVEDLERLMCEIGN 360
           DTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVECKGKHHDVEDLERLMCEIGN
Sbjct: 301 DTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVECKGKHHDVEDLERLMCEIGN 360

Query: 361 MRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEETAAME 403
           MRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEETAAME
Sbjct: 361 MRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEETAAME 394

[Close]

BLAST of CmoCh06G001600 vs. ExPASy TrEMBL
Match: A0A6J1I216 (uncharacterized protein LOC111470181 OS=Cucurbita maxima OX=3661 GN=LOC111470181 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 2.7e-217
Identity = 386/406 (95.07%), Postives = 390/406 (96.06%), Query Frame = 0


Query: 1   MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQY 60
           MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAM+SSTQVSVHGWTIDTQY
Sbjct: 1   MSGEHLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMNSSTQVSVHGWTIDTQY 60

Query: 61  YTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVL 120
           YTADVSVSVAHLDEQFSIEALPTFNQLAALVM+FDMNDLSSHATLRDWVAHADLQKFDVL
Sbjct: 61  YTADVSVSVAHLDEQFSIEALPTFNQLAALVMIFDMNDLSSHATLRDWVAHADLQKFDVL 120

Query: 121 LCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSWE 180
           LCIGNKVDLVPGHPVHAEYRKFLQKQRLKDS TDYSDTVEYGISEIEGSSLLGDEDPSWE
Sbjct: 121 LCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSSTDYSDTVEYGISEIEGSSLLGDEDPSWE 180

Query: 181 TRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGD 240
           TRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGD
Sbjct: 181 TRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGD 240

Query: 241 KITKPSFPKEEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSI 300
           KITKPSFPKEE        +LSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSI
Sbjct: 241 KITKPSFPKEE--------ELSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSI 300

Query: 301 DTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVE----CKGKHHDVEDLERLMC 360
           DTGAHPKE DNAEQDQACQNTRDQAEAEENAVATNGEH E    CKGKHHDVEDLERLMC
Sbjct: 301 DTGAHPKEVDNAEQDQACQNTRDQAEAEENAVATNGEHDEVKDPCKGKHHDVEDLERLMC 360

Query: 361 EIGNMRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEETAAME 403
           EIGNMRDSLRLMPDFQRREMAA LALKMAAMFGGSSDDEEETAAM+
Sbjct: 361 EIGNMRDSLRLMPDFQRREMAAKLALKMAAMFGGSSDDEEETAAMD 398

[Close]

BLAST of CmoCh06G001600 vs. ExPASy TrEMBL
Match: A0A0A0L1S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340530 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.1e-174
Identity = 320/402 (79.60%), Postives = 342/402 (85.07%), Query Frame = 0


Query: 1   MSGE-HLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQ 60
           M GE  LN IPLESRPGIL VGSSNVGKRSLLSRLL+VDFEDA++SS+QVSVHGWTI+TQ
Sbjct: 1   MGGELPLNAIPLESRPGILLVGSSNVGKRSLLSRLLTVDFEDALNSSSQVSVHGWTINTQ 60

Query: 61  YYTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDV 120
           YYTADVSVSVAHL E FSIEALP FNQLAALVMVFDMNDLSS  TL+DW    DLQ FDV
Sbjct: 61  YYTADVSVSVAHLHEDFSIEALPMFNQLAALVMVFDMNDLSSLVTLQDWATRVDLQNFDV 120

Query: 121 LLCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSW 180
           LLCIGNKVDLVPGHPVH EYRK LQKQRLKDS  DYSDT EYGISE EGSSLLGDED SW
Sbjct: 121 LLCIGNKVDLVPGHPVHMEYRKLLQKQRLKDSSIDYSDTAEYGISETEGSSLLGDEDSSW 180

Query: 181 ETRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSG 240
           ETRRSCLEWC+ERNIEF+EACASNADFD+CLSIDGDIQGVQRLYGALSAHMWPGM LKSG
Sbjct: 181 ETRRSCLEWCIERNIEFLEACASNADFDQCLSIDGDIQGVQRLYGALSAHMWPGMTLKSG 240

Query: 241 DKITKPSFPKEEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSS 300
           DKITKPS PKEE         LSEEESD EIDYE LS GSAEPWDDTD++GCS NGEG S
Sbjct: 241 DKITKPSLPKEE---------LSEEESDFEIDYEVLSAGSAEPWDDTDYQGCSLNGEGLS 300

Query: 301 IDTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVE----CKGKHHDVEDLERLM 360
           +D GAH K+ D AEQ++ACQN   Q + EEN VA +GE  +    C+GKH D+EDLERLM
Sbjct: 301 MDAGAHRKDDDIAEQNRACQNISKQTKGEENPVAMDGELDQVTNPCEGKHLDLEDLERLM 360

Query: 361 CEIGNMRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEE 398
            EIGNMRDSLRLMPDFQRREMAA LA KMAAMF GSSDD++E
Sbjct: 361 SEIGNMRDSLRLMPDFQRREMAAKLATKMAAMFAGSSDDDDE 393

[Close]

BLAST of CmoCh06G001600 vs. ExPASy TrEMBL
Match: A0A6J1E5M4 (uncharacterized protein LOC111430989 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430989 PE=4 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 4.0e-173
Identity = 320/400 (80.00%), Postives = 345/400 (86.25%), Query Frame = 0


Query: 5   HLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQYYTAD 64
           HLNPIPLESRPGILF+GSSNVGKRSLLSRLL+VDFEDA++SS+Q+SVHGWTI+TQYYTAD
Sbjct: 6   HLNPIPLESRPGILFIGSSNVGKRSLLSRLLTVDFEDALNSSSQISVHGWTINTQYYTAD 65

Query: 65  VSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVLLCIG 124
           VSVSVAHL E+FSIEALP FNQLAALVMVFD+NDLSS  TL+DWVAH D+QKFDVLLCIG
Sbjct: 66  VSVSVAHLHEEFSIEALPMFNQLAALVMVFDLNDLSSLVTLQDWVAHVDVQKFDVLLCIG 125

Query: 125 NKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSWETRRS 184
           NKVD+VPGHPVH EYRK +QKQR KDS  DYSDT EYGI EIEGSSLLGDED SWETRRS
Sbjct: 126 NKVDVVPGHPVHIEYRKLVQKQRHKDSSIDYSDTGEYGIYEIEGSSLLGDEDSSWETRRS 185

Query: 185 CLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGDKITK 244
           CLEWC+ERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGDKIT 
Sbjct: 186 CLEWCIERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGDKITN 245

Query: 245 PSFPKEEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSIDTGA 304
           PSFPKEE        +LSEEESD EIDYE LS GSAE WDD  FKGCSSNGEGSSID GA
Sbjct: 246 PSFPKEE--------ELSEEESDFEIDYEILSGGSAEMWDDISFKGCSSNGEGSSIDAGA 305

Query: 305 HPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVECK----GKHHDVEDLERLMCEIGN 364
              + D AEQDQA Q+  +  +AEEN VA +GE  +      GKH D+EDLERLM EIGN
Sbjct: 306 LVNDVDIAEQDQASQSICEPPKAEENHVAVDGELDQMTNPFIGKHLDLEDLERLMSEIGN 365

Query: 365 MRDSLRLMPDFQRREMAANLALKMAAMFGGSS-DDEEETA 400
           +RDSLRLMPDFQRREMAA LALKMA MFG SS DD+EET+
Sbjct: 366 VRDSLRLMPDFQRREMAAKLALKMATMFGASSEDDDEETS 397

[Close]

BLAST of CmoCh06G001600 vs. ExPASy TrEMBL
Match: A0A1S3CMD7 (uncharacterized protein LOC103502455 OS=Cucumis melo OX=3656 GN=LOC103502455 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 6.9e-173
Identity = 318/402 (79.10%), Postives = 342/402 (85.07%), Query Frame = 0


Query: 1   MSGE-HLNPIPLESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQ 60
           M GE  L+PIPLESRPGILFVGS NVGKRSLLSRLL+ DFEDA++SS+QVSVHGWTI+TQ
Sbjct: 1   MGGELPLDPIPLESRPGILFVGSPNVGKRSLLSRLLTADFEDALNSSSQVSVHGWTINTQ 60

Query: 61  YYTADVSVSVAHLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDV 120
           YYTADVSVSVAHL E FSIEALP FNQL ALVMVFDMNDLSS  TL+DW AH DLQKF+V
Sbjct: 61  YYTADVSVSVAHLHEDFSIEALPMFNQLDALVMVFDMNDLSSLVTLQDWAAHVDLQKFNV 120

Query: 121 LLCIGNKVDLVPGHPVHAEYRKFLQKQRLKDSCTDYSDTVEYGISEIEGSSLLGDEDPSW 180
           LLCIGNKVDLVPGHPVH EYRK LQKQRLKDS  DYSDT EYGISE EGSSLLGDED SW
Sbjct: 121 LLCIGNKVDLVPGHPVHTEYRKLLQKQRLKDSSIDYSDTAEYGISETEGSSLLGDEDTSW 180

Query: 181 ETRRSCLEWCVERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSG 240
           ETRRSCLEWC+ERNIEF+EACASNADFDKCLSIDGD+QGVQRLYGALSAHMWPGMIL SG
Sbjct: 181 ETRRSCLEWCIERNIEFLEACASNADFDKCLSIDGDMQGVQRLYGALSAHMWPGMILNSG 240

Query: 241 DKITKPSFPKEEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSS 300
           DKITKPS PKEE         LSEEESD EIDYE LS GSAEPWDDTD++GCS NGEG S
Sbjct: 241 DKITKPSLPKEE---------LSEEESDFEIDYEILSAGSAEPWDDTDYQGCSLNGEGFS 300

Query: 301 IDTGAHPKEADNAEQDQACQNTRDQAEAEENAVATNGEHVE----CKGKHHDVEDLERLM 360
           ID GAH K+   AEQ++A QN  +  + EEN VA +GE  +    C+GKH D+EDLERLM
Sbjct: 301 IDAGAHGKDYHIAEQNRARQNISEGTKGEENPVAIDGELDQVTNPCEGKHLDLEDLERLM 360

Query: 361 CEIGNMRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEE 398
            EIGNMRDSLRLMPDFQRREMAA LA KMAAMF GSSDD++E
Sbjct: 361 SEIGNMRDSLRLMPDFQRREMAAKLATKMAAMFAGSSDDDDE 393

[Close]

BLAST of CmoCh06G001600 vs. TAIR 10
Match: AT5G65960.1 (GTP binding )

HSP 1 Score: 416.0 bits (1068), Expect = 3.4e-116
Identity = 221/401 (55.11%), Postives = 287/401 (71.57%), Query Frame = 0


Query: 11  LESRPGILFVGSSNVGKRSLLSRLLSVDFEDAMDSSTQVSVHGWTIDTQYYTADVSVSVA 70
           +ESRPG+L VGSS VGKR+LLSRLLSV+FED+ +SS+Q  VHGWTI+T+YYTADVSV ++
Sbjct: 1   MESRPGVLVVGSSGVGKRTLLSRLLSVEFEDSSESSSQTEVHGWTINTKYYTADVSVCIS 60

Query: 71  HLDEQFSIEALPTFNQLAALVMVFDMNDLSSHATLRDWVAHADLQKFDVLLCIGNKVDLV 130
           H+ +++S+  LP  + L ALVMVFD+++LS+   L+DWV+H D+  FD+LLCIGNKVD V
Sbjct: 61  HICDEYSLPNLPNSHPLVALVMVFDLSELSTLVALQDWVSHTDINSFDILLCIGNKVDRV 120

Query: 131 PGHPVHAEYRKFLQKQRLKDSCTD-YSDTVEYGISEIEGSSLLGDEDPSWETRRSCLEWC 190
           P H  H EYR+ L K    D   D YSD  ++GISE EGSSLLG ED S + R +CLEWC
Sbjct: 121 PHHLAHDEYRRRLLK--ASDPSRDLYSDIDDFGISETEGSSLLGSEDASLDIRGACLEWC 180

Query: 191 VERNIEFIEACASNADFDKCLSIDGDIQGVQRLYGALSAHMWPGMILKSGDKITKPSFPK 250
            E NIEFIEACASN DFDKCLS+DGD QGV+RL+GALSAHMWPGMILKSGD+I +P  P+
Sbjct: 181 SENNIEFIEACASNPDFDKCLSVDGDSQGVERLFGALSAHMWPGMILKSGDRINEPVLPQ 240

Query: 251 EEGLLHYINLKLSEEESDIEIDYEKLSEGSAEPWDDTDFKGCSSNGEGSSIDTGAHPKEA 310
            E        +LSEEES+ E++YE LS GS +PWD+ + +  S++   S  D G    + 
Sbjct: 241 GE--------ELSEEESEYELEYEVLSAGSGDPWDNIEERWVSASETHSHADAGGSTSQE 300

Query: 311 D-NAEQDQACQNTRDQ-----------AEAEENAVATNGEHVECKG-KHHDVEDLERLMC 370
           + + E      N  D+               + A+ T+ + +  +  K ++ ED+E+LM 
Sbjct: 301 NLHVENSMVKPNKVDEELLPSGSRLELQNDTDRAIVTDEKPLGTENEKCYEFEDVEQLMS 360

Query: 371 EIGNMRDSLRLMPDFQRREMAANLALKMAAMFGGSSDDEEE 398
           EIGN+RD+LRLMPDFQRRE+AANLA+KMA+MFGG +DDEEE
Sbjct: 361 EIGNIRDNLRLMPDFQRREIAANLAMKMASMFGGDTDDEEE 391

The following BLAST results are available for this feature:

BLAST of CmoCh06G001600 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G001600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F587	3.3e-223	97.76	uncharacterized protein LOC111440972 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]
A0A6J1I216	2.7e-217	95.07	uncharacterized protein LOC111470181 OS=Cucurbita maxima OX=3661 GN=LOC111470181...	[more]
A0A0A0L1S1	2.1e-174	79.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340530 PE=4 SV=1	[more]
A0A6J1E5M4	4.0e-173	80.00	uncharacterized protein LOC111430989 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3CMD7	6.9e-173	79.10	uncharacterized protein LOC103502455 OS=Cucumis melo OX=3656 GN=LOC103502455 PE=...	[more]

BLAST of CmoCh06G001600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65960.1	3.4e-116	55.11	GTP binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 311..331
None	No IPR available	PFAM	PF10199	Adaptin_binding	coord: 216..382 e-value: 5.4E-19 score: 69.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..328
None	No IPR available	CDD	cd00882	Ras_like_GTPase	coord: 18..152 e-value: 7.20743E-8 score: 49.7624
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..141 e-value: 4.3E-8 score: 32.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 16..211 e-value: 3.9E-13 score: 51.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..150
IPR019341	Alpha/gamma-adaptin-binding protein p34	PANTHER	PTHR14659	ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34	coord: 11..397

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001600.1	CmoCh06G001600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding