CmoCh06G001430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G001430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	WUSCHEL-related homeobox 13
Location	Cmo_Chr06: 768695 .. 771401 (-)
RNA-Seq Expression	CmoCh06G001430
Synteny	CmoCh06G001430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATTTAAGAAAAATATATTATTATTTTAATAATCATTTGTCTCTCTTTATTTTCTGGTTAACCGTCCTGTGTTTTGTGAGCCTCCACTCTCATTTTCCCTCTTTTCTCTTTCTATCTCTAGGAATTCAATAGCGAAGCAGAGATTATGATGGATCCTTACCACCACCACCACCACCACCACCAGAACCCTCCTCTTCGCGACGATCATCTCCGTTACCTTACCGGAACCACCGCTGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACTCTTACTGCTCACCAGGATCTCAAAGGTGCTGCAATGCTCTTTTCTTTTACTTCTTCTTTCAATTCAATGGATGAATTAGGCTTATTGCTTTAGTACCGGCTTCTGTACTGCAGTCTTGTTGGTTGGAGTATTGATTTTTTTTTTTTTTTTAATGGATTATTGATTGCCTGCTTTCTTCTCGATCGTTTGTATTGAATTTTGATTGCTGTCTTTCTGTTCAATTTGTATGGTGCAAGCTTTCTTGTTTCTTTTTTCTGCTTTGGAAAAGCGTCTGGCCATTTTGAGCTGTTTGTTACCTCGAAAAAGGGCAAACATCTAATGCTGTAAGACTAATGGTTTCCCCTTTTGTGTTGCTATCCATCTTTTTATGGTCCTTTGGGGCGTGGAAGACTGCCCTGCCGTAAAGCATTTATTTCCCTCCTCTTTCATTGTTTGCAGGATGGTTATCTTAATTATGAGGCGCTTTAATAACCGCCGAGTGATCTACTTTTTGCAAAACAGCAGAAAAATTGTTTGTTTTTTCAACTATTTCTCGAGTATTCCTATGACGAAGTGAATCTTTTTTATTTATAATTTTGGAAAATCGTCATCACCGTTAATCAAACGGGTGGGAATGAGATATATTTTCTTTAGCAATTGAATGAGGGGTTCAGTATAACTTTTTGTAAGCTGAATAAGCCAGGTGAAAACTCGACAGTTTTGATAATAATATTCATTCATTGTTCTTGGTTTAAGATTGTTGTGGTGATATGGCTTCGACTTGTAGAAACTGGAAACTGCTTTCTGCTCCTGTATGATCTTGGAGACAATCTGATGAGCCTCCTCTATGCACTTGCTTAAAGCTTGTGTCTTGCTGCTTTGCAGGAATGAGGTTGGGTAGTGTGTACTATGAGCCATTGATGGCATCTTCCAGCCACAAAATTACTTCTAGACAGCGATGGACTCCGTTGCCCGTGCAACTTCAGATCTTGGAGCGTATATTCGAGCAAGGGAATGGAACTCCTAGCAAGCAAAAGATCAAAGAGATTACCTCTGAACTGGGTCAACATGGGCAAATTTCTGAATCAAATGTCTATAATTGGTTCCAAAACAGGCGTGCTCGATCAAAGAGGAAGCAGCAGGGTACAGCGCCTACGTATGGTGAATCAGAATTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCCTCAAACCTCTGCACCTTTGGGGGAGGACATGGGCTTCCAGAGTCCTGAGATGCACTATGAACTGCATTTCCTGGATCCAAATACCAACAAAGCTGATACTTTGTTTCCATCAAATGGAAGTTCAAAAACCGCAAGAACTTTTAGTCAGATGTCTTCTTATGAAGGTATGCCGTAAGGGTTTCTTGCCACTTATTCATATGATTTATTAATCATCTTTTTGCCTGACATAACAAATTTCTTTCTAGTCGTATTATTTGGAGGATTCAGAAAAGTATTGAACTTTCTCATTTGTCAAGTATTTAACTTGCTGATAGGTGAATACACACAAAAACTTGAATTAAAAGTTCAGTTAGAATCCTGTTTTGCCAGGAAAGTCCTAGGTCCTACAGGGTATATACTTTCATAATCACCCTCTTTGTAACTGTTGTGTGTTAATTTTGATATAACTATGATGACAAGCATGTGCAAGAAAAATGAGTTGCTAACTTGCTACCTCTAAATACGTTAGGAAGATCCTCAATTGATACTGTTTTTTCCTTTGGATATCCATCTCTGTCACACCTCCACACAGAGAATATAGAATTGAGTATCTGCTTTTCTTTGTGAAATTGATTACAGCAGGGAATGAACAGCTGACAGGAAAGATCGAGACACCAGAAAACTATAGTCTTTACTCGCAAGCAGAAGGATGCATGGCCGAACAACCCTGAATTCTTTTACAGTTGACACAAAAGTGTTCTTGTCTTATTACGAATATGCTGGACTTCTAGCTTTCATGTGACTAGTCCATTATTGAAGGAAACGGTGATGATGATGTTGATGTCGATGATGAAGGTGGCAACTTGTGTGCTCGTATCTGGTCGTGATTCGTGGATTGTCGGAGTGTTCAGTCTTGAGTAATGTATTTTGGTTGGATTGTATTTGGAGATGAGCTTTGAGAGTTGATTAGTTGATTGAGCCATTGACAGTGTTGTAGTTTTGTTAAATGGCCCCTCTAAGGAGAGAAGGCCATTTGTAAAAGAACGCGTTTGTATGGAAAAGAGATTGCAAAGGCGATCCTCAACCTCATTCCTTTTATTGTTGGTTTACTTACAATTACCAATAGATAATTAGTTAAGCCAACATTTAAGTGGGAACGTTGATCATTAC

mRNA sequence

ATAATTTAAGAAAAATATATTATTATTTTAATAATCATTTGTCTCTCTTTATTTTCTGGTTAACCGTCCTGTGTTTTGTGAGCCTCCACTCTCATTTTCCCTCTTTTCTCTTTCTATCTCTAGGAATTCAATAGCGAAGCAGAGATTATGATGGATCCTTACCACCACCACCACCACCACCACCAGAACCCTCCTCTTCGCGACGATCATCTCCGTTACCTTACCGGAACCACCGCTGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACTCTTACTGCTCACCAGGATCTCAAAGGAATGAGGTTGGGTAGTGTGTACTATGAGCCATTGATGGCATCTTCCAGCCACAAAATTACTTCTAGACAGCGATGGACTCCGTTGCCCGTGCAACTTCAGATCTTGGAGCGTATATTCGAGCAAGGGAATGGAACTCCTAGCAAGCAAAAGATCAAAGAGATTACCTCTGAACTGGGTCAACATGGGCAAATTTCTGAATCAAATGTCTATAATTGGTTCCAAAACAGGCGTGCTCGATCAAAGAGGAAGCAGCAGGGTACAGCGCCTACGTATGGTGAATCAGAATTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCCTCAAACCTCTGCACCTTTGGGGGAGGACATGGGCTTCCAGAGTCCTGAGATGCACTATGAACTGCATTTCCTGGATCCAAATACCAACAAAGCTGATACTTTGTTTCCATCAAATGGAAGTTCAAAAACCGCAAGAACTTTTAGTCAGATGTCTTCTTATGAAGCAGGGAATGAACAGCTGACAGGAAAGATCGAGACACCAGAAAACTATAGTCTTTACTCGCAAGCAGAAGGATGCATGGCCGAACAACCCTGAATTCTTTTACAGTTGACACAAAAGTGTTCTTGTCTTATTACGAATATGCTGGACTTCTAGCTTTCATGTGACTAGTCCATTATTGAAGGAAACGGTGATGATGATGTTGATGTCGATGATGAAGGTGGCAACTTGTGTGCTCGTATCTGGTCGTGATTCGTGGATTGTCGGAGTGTTCAGTCTTGAGTAATGTATTTTGGTTGGATTGTATTTGGAGATGAGCTTTGAGAGTTGATTAGTTGATTGAGCCATTGACAGTGTTGTAGTTTTGTTAAATGGCCCCTCTAAGGAGAGAAGGCCATTTGTAAAAGAACGCGTTTGTATGGAAAAGAGATTGCAAAGGCGATCCTCAACCTCATTCCTTTTATTGTTGGTTTACTTACAATTACCAATAGATAATTAGTTAAGCCAACATTTAAGTGGGAACGTTGATCATTAC

Coding sequence (CDS)

ATGATGGATCCTTACCACCACCACCACCACCACCACCAGAACCCTCCTCTTCGCGACGATCATCTCCGTTACCTTACCGGAACCACCGCTGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACTCTTACTGCTCACCAGGATCTCAAAGGAATGAGGTTGGGTAGTGTGTACTATGAGCCATTGATGGCATCTTCCAGCCACAAAATTACTTCTAGACAGCGATGGACTCCGTTGCCCGTGCAACTTCAGATCTTGGAGCGTATATTCGAGCAAGGGAATGGAACTCCTAGCAAGCAAAAGATCAAAGAGATTACCTCTGAACTGGGTCAACATGGGCAAATTTCTGAATCAAATGTCTATAATTGGTTCCAAAACAGGCGTGCTCGATCAAAGAGGAAGCAGCAGGGTACAGCGCCTACGTATGGTGAATCAGAATTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCCTCAAACCTCTGCACCTTTGGGGGAGGACATGGGCTTCCAGAGTCCTGAGATGCACTATGAACTGCATTTCCTGGATCCAAATACCAACAAAGCTGATACTTTGTTTCCATCAAATGGAAGTTCAAAAACCGCAAGAACTTTTAGTCAGATGTCTTCTTATGAAGCAGGGAATGAACAGCTGACAGGAAAGATCGAGACACCAGAAAACTATAGTCTTTACTCGCAAGCAGAAGGATGCATGGCCGAACAACCCTGA

Protein sequence

MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP

Homology

[Close]

BLAST of CmoCh06G001430 vs. ExPASy Swiss-Prot
Match: O81788 (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62
Identity = 142/286 (49.65%), Postives = 173/286 (60.49%), Query Frame = 0


Query: 2   MDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLV 61
           + P +HH  + Q   +             G +YVKVMTDEQ ETLRKQIA+Y TICE+LV
Sbjct: 8   LQPNNHHSSNLQGIDVNGG------SGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLV 67

Query: 62  EMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTP 121
           EMHKTLTA QDL G R+G +Y +P+M+S  HK+T+RQRWTP PVQLQILERIF+QG GTP
Sbjct: 68  EMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTP 127

Query: 122 SKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQG---TAPTYGESELETEVESP 181
           SKQKIK+IT EL QHGQI+E NVYNWFQNRRARSKRKQ G   +    GESE+ETEVE+ 
Sbjct: 128 SKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEAL 187

Query: 182 KDKK----------------TKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKA 241
            +K+                   +   T  T+AP  ED+ FQSPE+  +LH LD  +N  
Sbjct: 188 NEKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPR 247

Query: 242 DTLFPSNGSSKTARTFSQMSSYEAGNEQLTGKIETPENYSLYSQAE 269
           D                         E L GK+   E+Y+LY   E
Sbjct: 248 D-------------------------EHLVGKMGLAESYNLYDHVE 262

[Close]

BLAST of CmoCh06G001430 vs. ExPASy Swiss-Prot
Match: Q5QMM3 (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.8e-60
Identity = 129/245 (52.65%), Postives = 166/245 (67.76%), Query Frame = 0


Query: 27  GTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQD-LKGMRLGSVYYEP 86
           G   G  YVKVMTDEQ+E LRKQI++YATICEQLVEMH+ LTA QD + GMRLG++Y +P
Sbjct: 19  GGEGGLGYVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDP 78

Query: 87  LMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVY 146
           LM    HKIT+RQRWTP P+QLQILE IF+QGNGTPSKQKIK+IT+EL QHGQISE+NVY
Sbjct: 79  LMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVY 138

Query: 147 NWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKPVDFQTPQTSAPLGEDMGFQ- 206
           NWFQNRRARSKRKQ        ESE E + ESP DKK        P++  PL +++  + 
Sbjct: 139 NWFQNRRARSKRKQAALPNNNAESEAEADEESPTDKK--------PKSDRPLHQNIAMRD 198

Query: 207 -SPEMHYELHFLDPNTNKADTLF--PSNGSSKTARTFSQMSSYE-----AGNEQLTGKIE 262
            + E   E+H  D    +   +    ++ SS+++ +  QMS Y+        +   GK+E
Sbjct: 199 HNSERISEMHHFDTEHEQIRRMMYASNDSSSRSSGSLGQMSFYDNVMSNPRIDHFLGKVE 255

[Close]

BLAST of CmoCh06G001430 vs. ExPASy Swiss-Prot
Match: Q9LM84 (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.5e-38
Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 0


Query: 31  GALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMA 90
           GA   +VMT+EQ+E LRKQIAVYA IC+QLV +H +L+++  L  G+R +   Y++P+ A
Sbjct: 24  GAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGA 83

Query: 91  -SSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNW 150
            SSSH+I++R RWTP   QLQILE I+++G+GTP++++I+EI +EL +HGQI+E+NVYNW
Sbjct: 84  SSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNW 143

Query: 151 FQNRRARSKRKQQGTAPTYGESE 171
           FQNRRARSKRKQ  T    G+++
Sbjct: 144 FQNRRARSKRKQPQTTTANGQAD 166

[Close]

BLAST of CmoCh06G001430 vs. ExPASy Swiss-Prot
Match: Q9LM83 (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-35
Identity = 77/130 (59.23%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 36  KVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMASSS-H 95
           +VMTDEQ+ETLRKQIA+YA +C+QLV +H +L++   L  GM  +   Y++P++ASSS H
Sbjct: 13  RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72

Query: 96  KITSRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRR 155
            +++R RWTP   QLQILE I+++G+GTP+ ++IKEIT EL +HGQI E NVY+WFQNRR
Sbjct: 73  GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132

Query: 156 ARSKRKQQGT 163
           ARSKRKQ  T
Sbjct: 133 ARSKRKQPPT 142

[Close]

BLAST of CmoCh06G001430 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 5.8e-11
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 66  TLTAHQDLKGMRL--GSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSK 125
           T+TA Q+ + + +      + P+M SS        RW P P QL++LE ++ QG  TPS 
Sbjct: 49  TMTAEQNKRELMMLNSEPQHPPVMVSS--------RWNPTPDQLRVLEELYRQGTRTPSA 108

Query: 126 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPT-YGESELETE--VESPKD 185
             I++IT++L ++G+I   NV+ WFQN +AR ++K++    T + E+ L T   V +   
Sbjct: 109 DHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGF 168

Query: 186 KKTKPVDFQTPQTS---APLGEDMGFQSPEMHYEL 213
            K  P  ++  Q       +G D   + P   Y L
Sbjct: 169 DKKDPPGYKVEQVKNWICSVGCDTQPEKPSRDYHL 195

[Close]

BLAST of CmoCh06G001430 vs. ExPASy TrEMBL
Match: A0A6J1FD42 (WUSCHEL-related homeobox 13 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442921 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 276
           MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 275

[Close]

BLAST of CmoCh06G001430 vs. ExPASy TrEMBL
Match: A0A6J1F702 (WUSCHEL-related homeobox 13 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442921 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 7.8e-152
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 276
           MSSYE GNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 MSSYE-GNEQLTGKIETPENYSLYSQAEGCMAEQP 274

[Close]

BLAST of CmoCh06G001430 vs. ExPASy TrEMBL
Match: A0A6J1I8W8 (WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470237 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.1e-148
Identity = 268/275 (97.45%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPY   HHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPY---HHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAP YGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPAYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGED+GFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTAR+FSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDVGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARSFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 276
           MSSYEAGNEQLTGKIETPENYSLYSQAEGCM EQP
Sbjct: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMTEQP 272

[Close]

BLAST of CmoCh06G001430 vs. ExPASy TrEMBL
Match: A0A6J1I625 (WUSCHEL-related homeobox 13-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470237 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.2e-146
Identity = 267/275 (97.09%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPY   HHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPY---HHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAP YGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPAYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGED+GFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTAR+FSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDVGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARSFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 276
           MSSYE GNEQLTGKIETPENYSLYSQAEGCM EQP
Sbjct: 241 MSSYE-GNEQLTGKIETPENYSLYSQAEGCMTEQP 271

[Close]

BLAST of CmoCh06G001430 vs. ExPASy TrEMBL
Match: A0A5A7UHA8 (WUSCHEL-related homeobox 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00270 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.1e-128
Identity = 236/268 (88.06%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 3   DPYHHHHHHHQNPPLRDDHLRYLTGTT-AGALYVKVMTDEQLETLRKQIAVYATICEQLV 62
           +PYHHHHHHH NPPL DDHL +LTGTT AGALYVKVMTD+QLETLRKQIAVYATICEQLV
Sbjct: 11  NPYHHHHHHHHNPPLCDDHLHHLTGTTAAGALYVKVMTDDQLETLRKQIAVYATICEQLV 70

Query: 63  EMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTP 122
           EMHKTLTAHQDL GMRLG++Y EPLM SSSHKITSRQRWTP PVQLQILERIF+QGNGTP
Sbjct: 71  EMHKTLTAHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFDQGNGTP 130

Query: 123 SKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDK 182
           SKQKIKEIT+ELGQHGQISESNVYNWFQNRRARSKRKQQ   P YGESE+ETEVESPKDK
Sbjct: 131 SKQKIKEITAELGQHGQISESNVYNWFQNRRARSKRKQQSAPPAYGESEVETEVESPKDK 190

Query: 183 KTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQM 242
           KTKPVDFQT Q+SAPLG+DM FQSPEM  ELHFLDPNTNKADTLFPSNGS KTAR+F QM
Sbjct: 191 KTKPVDFQTNQSSAPLGDDMCFQSPEMSSELHFLDPNTNKADTLFPSNGSLKTARSFGQM 250

Query: 243 SSYEAGNEQLTGKIETPENYSLYSQAEG 270
           S YEAGNEQLTGKIETPENYS+Y QAEG
Sbjct: 251 SFYEAGNEQLTGKIETPENYSIYQQAEG 278

[Close]

BLAST of CmoCh06G001430 vs. TAIR 10
Match: AT4G35550.1 (WUSCHEL related homeobox 13 )

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-63
Identity = 142/286 (49.65%), Postives = 173/286 (60.49%), Query Frame = 0


Query: 2   MDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLV 61
           + P +HH  + Q   +             G +YVKVMTDEQ ETLRKQIA+Y TICE+LV
Sbjct: 8   LQPNNHHSSNLQGIDVNGG------SGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLV 67

Query: 62  EMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTP 121
           EMHKTLTA QDL G R+G +Y +P+M+S  HK+T+RQRWTP PVQLQILERIF+QG GTP
Sbjct: 68  EMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTP 127

Query: 122 SKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQG---TAPTYGESELETEVESP 181
           SKQKIK+IT EL QHGQI+E NVYNWFQNRRARSKRKQ G   +    GESE+ETEVE+ 
Sbjct: 128 SKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEAL 187

Query: 182 KDKK----------------TKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKA 241
            +K+                   +   T  T+AP  ED+ FQSPE+  +LH LD  +N  
Sbjct: 188 NEKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPR 247

Query: 242 DTLFPSNGSSKTARTFSQMSSYEAGNEQLTGKIETPENYSLYSQAE 269
           D                         E L GK+   E+Y+LY   E
Sbjct: 248 D-------------------------EHLVGKMGLAESYNLYDHVE 262

[Close]

BLAST of CmoCh06G001430 vs. TAIR 10
Match: AT1G20700.1 (WUSCHEL related homeobox 14 )

HSP 1 Score: 158.7 bits (400), Expect = 6.8e-39
Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 0


Query: 31  GALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMA 90
           GA   +VMT+EQ+E LRKQIAVYA IC+QLV +H +L+++  L  G+R +   Y++P+ A
Sbjct: 24  GAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGA 83

Query: 91  -SSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNW 150
            SSSH+I++R RWTP   QLQILE I+++G+GTP++++I+EI +EL +HGQI+E+NVYNW
Sbjct: 84  SSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNW 143

Query: 151 FQNRRARSKRKQQGTAPTYGESE 171
           FQNRRARSKRKQ  T    G+++
Sbjct: 144 FQNRRARSKRKQPQTTTANGQAD 166

[Close]

BLAST of CmoCh06G001430 vs. TAIR 10
Match: AT1G20710.1 (WUSCHEL related homeobox 10 )

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-36
Identity = 77/130 (59.23%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 36  KVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMASSS-H 95
           +VMTDEQ+ETLRKQIA+YA +C+QLV +H +L++   L  GM  +   Y++P++ASSS H
Sbjct: 13  RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72

Query: 96  KITSRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRR 155
            +++R RWTP   QLQILE I+++G+GTP+ ++IKEIT EL +HGQI E NVY+WFQNRR
Sbjct: 73  GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132

Query: 156 ARSKRKQQGT 163
           ARSKRKQ  T
Sbjct: 133 ARSKRKQPPT 142

[Close]

BLAST of CmoCh06G001430 vs. TAIR 10
Match: AT2G33880.1 (homeobox-3 )

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-12
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 85  PLMASSSHKIT-------------SRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITS 144
           PL+ S+SH+ +              + RW P P Q++ILE IF  G   P +++I+ I +
Sbjct: 28  PLLPSASHRSSPFSSGCEVERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRA 87

Query: 145 ELGQHGQISESNVYNWFQNRRARSKRK 159
           +L ++GQ+ ++NV+ WFQNR++RSK K
Sbjct: 88  QLQEYGQVGDANVFYWFQNRKSRSKHK 114

[Close]

BLAST of CmoCh06G001430 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-12
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 66  TLTAHQDLKGMRL--GSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSK 125
           T+TA Q+ + + +      + P+M SS        RW P P QL++LE ++ QG  TPS 
Sbjct: 49  TMTAEQNKRELMMLNSEPQHPPVMVSS--------RWNPTPDQLRVLEELYRQGTRTPSA 108

Query: 126 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPT-YGESELETE--VESPKD 185
             I++IT++L ++G+I   NV+ WFQN +AR ++K++    T + E+ L T   V +   
Sbjct: 109 DHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGF 168

Query: 186 KKTKPVDFQTPQTS---APLGEDMGFQSPEMHYEL 213
            K  P  ++  Q       +G D   + P   Y L
Sbjct: 169 DKKDPPGYKVEQVKNWICSVGCDTQPEKPSRDYHL 195

The following BLAST results are available for this feature:

BLAST of CmoCh06G001430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81788	1.9e-62	49.65	WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1	[more]
Q5QMM3	6.8e-60	52.65	WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2...	[more]
Q9LM84	9.5e-38	55.94	WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1	[more]
Q9LM83	3.4e-35	59.23	Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE...	[more]
Q6X7K0	5.8e-11	31.61	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]

BLAST of CmoCh06G001430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FD42	1.1e-153	100.00	WUSCHEL-related homeobox 13 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1F702	7.8e-152	99.64	WUSCHEL-related homeobox 13 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1I8W8	3.1e-148	97.45	WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1I625	2.2e-146	97.09	WUSCHEL-related homeobox 13-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7UHA8	2.1e-128	88.06	WUSCHEL-related homeobox 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of CmoCh06G001430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35550.1	1.4e-63	49.65	WUSCHEL related homeobox 13	[more]
AT1G20700.1	6.8e-39	55.94	WUSCHEL related homeobox 14	[more]
AT1G20710.1	2.4e-36	59.23	WUSCHEL related homeobox 10	[more]
AT2G33880.1	4.1e-12	37.93	homeobox-3	[more]
AT3G18010.1	4.1e-12	31.61	WUSCHEL related homeobox 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 95..162 e-value: 3.1E-15 score: 66.6
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 97..157 e-value: 1.9E-17 score: 62.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 93..158 score: 14.738147
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 97..159 e-value: 1.49326E-14 score: 64.572
None	No IPR available	GENE3D	1.10.10.60		coord: 97..163 e-value: 1.6E-20 score: 74.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..196
None	No IPR available	PANTHER	PTHR46777:SF9	SUBFAMILY NOT NAMED	coord: 26..269
IPR044559	WUSCHEL-related homeobox 13-like	PANTHER	PTHR46777	WUSCHEL-RELATED HOMEOBOX 13	coord: 26..269
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 95..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001430.1	CmoCh06G001430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity