CmoCh06G001100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G001100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	26S proteasome non-ATPase regulatory subunit 4 homolog
Location	Cmo_Chr06: 625580 .. 629211 (+)
RNA-Seq Expression	CmoCh06G001100
Synteny	CmoCh06G001100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGTTTCTCTGGTGAAGTGCTTCTTCAGTTCCAGACGTTCCGGCTTATTCTGCAAGAAACCTCAGTCTTCTGCCTTCTCTGCGATTCTCTGCTACTCCTTCGATTTCTCGGCGATTTCAATCTCTCAATATGGTGCTCGAGGTAGTTACTGATTACTGATCTCTTGTTCCAGATTGCAAATTTCATCCAGTTTTCCCCATTTCTTTGGAATTTCATTCTTCGCTACTTAGTTTAATGACCTTGAGTTTGTATGGATATGAAACTATCTTTTTTTTTTTTCGTTGCTTTTGGGTAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGCGATTTCAAGCTCAATCGGATGCCATTAGTCTCATTTGCGGAGCGAAGACTCAGGTGATTGATCGATTTCTCTTGTTTGACTATATTTCATTGTATGGATTCTTGGAAATCAAGGAATGTGGAGTCTTGATTTTACATTTTATGTTCTGTTTGGAGGGAAATTAGTTCTTCTGTCTCTTTGGCCTCCGTTGCTGTTTGGGGTTGTGAACTAGTTAGATTTATTGTATTGGTAGCTGTGAATTGGATTTTATTATGAAAAAACGAAATCACATTGCCGTCATTATCAAAATAGAAACTATCGTAATTAGTTTCTTCGAATTATCTGTTAGTCTCGCTATTTTTGTTTAAGCTATGGTTCTTTAGTTTTGAGGAAATTCTTTTCTCGTTTGCTTTTTTCCTTACAGTCTAACCCAGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGGTGCATGCATGGTTAGTTCTTTTACTTGCCTTTTCTTTCAAGTTAGTTCCCTTTTTTGAGTTTGAGGCTTCTTATAATGCCATGGGAGATTACATGAAAACTTAGGCACAAGATATTTATATGTGATCGTTTCTGTATTTGAAAAAAATTGCAAAATTTTAAACAAGCTCCTTAGTTCTGTCGCTTTTCTGGATTGTGACTCTCTGTCTCATGACTAATGATGTTTTGGACAATCTTAAAGTGCATTTTGTACATTCTCTGTAACTCATAAGATGCAATACATGTAACCTTTTCATTGATCCCTATAGAATTCGATCATTTTATTTTTGATAGACTGTTCATTTCTGTCGTGCAGTTCTGTCGATTTTTCTGAATAATGAGATTTTAGATGACTAATGATATATACGCCTCTCTTTGAATAATTTTCCCTACGAAAAAAGTATATATCCTCCTAAATTCTTGAATTTGACACTATTGGGCTTTACACTTTTGATACGTTACACGCCATGTGTTGCTGGTTGTAAATTAATCTACAGTGAAGAGCTGTAGTCTTTTTTGCTAGATTTCTCACTACGCTCACTCTATAAAACTTTTAACATTTTTATTTTTTCCACACTAGGTTTAGAGATAGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTTAAGCATCGTCAGAATAAGAAGCAGCAACAAAGAATTATTGTTTTTGCGGGAAGGTAGGCTCTTGTATCCCTTTTATGCATGTTTATTGTGCCATCCCAGTTATCGATTGTTCTCAAGTACCTATCCTATGTGTTCTTAGTCCTGCTAAACAAGAAAAAAAGTTGTTGGAGATGATTGGAAAGAAATTAAAGAAGAACAACGTGGCACTTGATATCATTGATTTTGGTGAAGAAGATGATTGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAATAGTAATGATTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAAATGCTCTTTCCGATGTACTTATTAGGTCAGTTGCTTCTTATTGTTTCCATTGTTGGACATAGTAAAATAGTACCCTCCATATGTTTTCTCAATCTCCCCTTCCATGTCAGTACACCAATCTTCACCAGCGATGGGGAGGGAGGAAGTGAATTTGCAGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCACTTCGAGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGGTGGCTGCTAAGAGATCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACTACCATCTGGCGCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAATGTTCTGATGCTCAAAAGACAAGTGATCCAATGGTTGGTTTATCTTAAATTACATAAGTTCAAATGCTGCAATAGACTAATAGAATGTCCATTATTTCAAATATATCAATGACACTCGCTTCATTGCTTAGTTTACTTTCTCTTCTCACACTTTTTTTTGGAGAGGAGAGAATGTTCATACATAGCTTCTACTTTGTTCATGGCGACATTTTTATTGCCTTGACAACTTTATGGAAAATAGAAGTACATGCGAAGTTTTGATATTCAATCTGGATTTGATTACAGGAAGATGAGAATGCTCTGTTACAACAAGCCCTTGCAATGTCGATGGAAGATCCTGTCTCGAGTCATGAGATGCAGGATACTGAAATGTCAGATGCAACAATAGATGATCCAGAGTTAGCTCTGGGTATGGTTATTTACTTCAAGTTTACCCATTCTTTGTATTGAATGTATGTTCTAACTATCTTTTCCATCTTCGTTTACCGCTTGGGTGGTTGCAGCCCTCAAGTTGTCTGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTATCCTCCATTCTTGCATCGGTATGAATTCTACAAGTTGCAAATACTTCTCTGAACTTATAGAATTACTATCAAATGATTCGGAGTATAGTTCAATTAGTTAAAACATATATTCTCAACCAACCGACTTAAGGTTTGAATCTTTCACTTCCACGTGTTGATCTCAAAAGTCATTCCAACCTGACCCTAAGAGAAACAAAAAAGTGGCTCCAACTACATGGTTTATGTTTAATCGACACAAGTGGAGATGTTTTGCAGCTTCCAGGGGTAGATCCAAATGATCCATCGGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGGCAGAGGTTAGTTTGTGATTAGTTAAAAAACCATGAGATGTTGCAGTTACTTTTAACCAGGGGTTGATCCATTTGTGCTTGTATGCCTTGAAACACAAATACACAGAAGATTAAAATTGTAAATTGTTTTGAAATCTTGTTTAAGGACAAGAAGAATGAAGAAAAGCCCCCCAAGGAAGACGAGGAAAAATGATCCATGCATCCATCCATCCATCCATCTTCCGAAGCTGAATATTGTGCTAGGTATTTCTCCTCATACAAGTGTTGCATTGTGTTCGTTCATCTGCAAAAGTAGTCACTTTTTTTTGCTTTTGGTTGGGCTGAAAACAAGAATGTATCACTTTGATGAAACTTCATTTTGATCAAAAAACTTGTTCAGAATTGTTGATCAGGTCCCTAACGTTTACTTTTGATTTGTTAATGTATGATTATAAATTTGTCAATTTTATTATTATGATTATAAACTTGTTCAATTCTCACTCTCAC

mRNA sequence

TGAGGTTTCTCTGGTGAAGTGCTTCTTCAGTTCCAGACGTTCCGGCTTATTCTGCAAGAAACCTCAGTCTTCTGCCTTCTCTGCGATTCTCTGCTACTCCTTCGATTTCTCGGCGATTTCAATCTCTCAATATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGCGATTTCAAGCTCAATCGGATGCCATTAGTCTCATTTGCGGAGCGAAGACTCAGTCTAACCCAGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGGTGCATGCATGGTTTAGAGATAGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTTAAGCATCGTCAGAATAAGAAGCAGCAACAAAGAATTATTGTTTTTGCGGGAAGTCCTGCTAAACAAGAAAAAAAGTTGTTGGAGATGATTGGAAAGAAATTAAAGAAGAACAACGTGGCACTTGATATCATTGATTTTGGTGAAGAAGATGATTGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAATAGTAATGATTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAAATGCTCTTTCCGATGTACTTATTAGTACACCAATCTTCACCAGCGATGGGGAGGGAGGAAGTGAATTTGCAGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCACTTCGAGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGGTGGCTGCTAAGAGATCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACTACCATCTGGCGCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAATGTTCTGATGCTCAAAAGACAAGTGATCCAATGGAAGATGAGAATGCTCTGTTACAACAAGCCCTTGCAATGTCGATGGAAGATCCTGTCTCGAGTCATGAGATGCAGGATACTGAAATGTCAGATGCAACAATAGATGATCCAGAGTTAGCTCTGGCCCTCAAGTTGTCTGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTATCCTCCATTCTTGCATCGCTTCCAGGGGTAGATCCAAATGATCCATCGGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGGCAGAGGACAAGAAGAATGAAGAAAAGCCCCCCAAGGAAGACGAGGAAAAATGATCCATGCATCCATCCATCCATCCATCTTCCGAAGCTGAATATTGTGCTAGGTATTTCTCCTCATACAAGTGTTGCATTGTGTTCGTTCATCTGCAAAAGTAGTCACTTTTTTTTGCTTTTGGTTGGGCTGAAAACAAGAATGTATCACTTTGATGAAACTTCATTTTGATCAAAAAACTTGTTCAGAATTGTTGATCAGGTCCCTAACGTTTACTTTTGATTTGTTAATGTATGATTATAAATTTGTCAATTTTATTATTATGATTATAAACTTGTTCAATTCTCACTCTCAC

Coding sequence (CDS)

ATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGCGATTTCAAGCTCAATCGGATGCCATTAGTCTCATTTGCGGAGCGAAGACTCAGTCTAACCCAGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGGTGCATGCATGGTTTAGAGATAGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTTAAGCATCGTCAGAATAAGAAGCAGCAACAAAGAATTATTGTTTTTGCGGGAAGTCCTGCTAAACAAGAAAAAAAGTTGTTGGAGATGATTGGAAAGAAATTAAAGAAGAACAACGTGGCACTTGATATCATTGATTTTGGTGAAGAAGATGATTGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAATAGTAATGATTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAAATGCTCTTTCCGATGTACTTATTAGTACACCAATCTTCACCAGCGATGGGGAGGGAGGAAGTGAATTTGCAGCAGCTTCAGCTGGTGGGGCCGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCACTTCGAGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGGTGGCTGCTAAGAGATCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGGGGAACTACCATCTGGCGCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAATGTTCTGATGCTCAAAAGACAAGTGATCCAATGGAAGATGAGAATGCTCTGTTACAACAAGCCCTTGCAATGTCGATGGAAGATCCTGTCTCGAGTCATGAGATGCAGGATACTGAAATGTCAGATGCAACAATAGATGATCCAGAGTTAGCTCTGGCCCTCAAGTTGTCTGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTATCCTCCATTCTTGCATCGCTTCCAGGGGTAGATCCAAATGATCCATCGGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGGCAGAGGACAAGAAGAATGAAGAAAAGCCCCCCAAGGAAGACGAGGAAAAATGA

Protein sequence

MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQEKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK

Homology

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BLAST of CmoCh06G001100 vs. ExPASy Swiss-Prot
Match: O82143 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RPN10 PE=1 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 4.8e-139
Identity = 283/406 (69.70%), Postives = 326/406 (80.30%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSRFQAQ+DA++LICGAKTQSNPENTVGV+TMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLE+G E NLAA IQVAQLALKHRQNK+QQQRII F GSP K 
Sbjct: 61  VLVTPTSDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           +KK+LE IGKKLKKNNVALDI+DFGE DD KPEKLEAL+SAVNS+DSSHIVHVP G NAL
Sbjct: 121 DKKVLETIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENAL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASA-----GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFT + EGGS FAA++A     G AGF+F VDPN+DPELALALR+SMEEERA
Sbjct: 181 SDVLISTPIFTGE-EGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENA-LLQQA 300
           RQE  AK++AEE+S  E      S   D+ M E   A  +   K   P ED++A LLQQA
Sbjct: 241 RQEAIAKKAAEESSGAENKDHASSSNADSVMAEAEPASNAADDKKDQPKEDDDAQLLQQA 300

Query: 301 LAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFV 360
           LAMSME+  S     D  M++A +DD +LALAL++SVQ+     +SQ DMSK+  D+SFV
Sbjct: 301 LAMSMEEGSSGAAAADAAMAEAAVDDQDLALALQMSVQD--AGGSSQSDMSKVFEDRSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           +SIL SLPGVDPNDPSVKDLLAS+  Q + E K+++   P EDE+K
Sbjct: 361 TSILNSLPGVDPNDPSVKDLLASLHGQGEQEKKEDKSDKP-EDEKK 402

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BLAST of CmoCh06G001100 vs. ExPASy Swiss-Prot
Match: P55034 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN10 PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.9e-127
Identity = 256/406 (63.05%), Postives = 325/406 (80.05%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ++A++L+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL TPTSDLGKIL CMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP K 
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDD-CKPEKLEALLSAVNSNDSSHIVHVPSGPNA 180
           EKK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NA
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERA 240
           LSDVL+STP+FT D EG S +    AAA+A G  FDFGVDPN+DPELALALRVSMEEERA
Sbjct: 181 LSDVLLSTPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQAL 300
           RQE AAK++A+E  +++K G+  S +Q+T       A  +D  K ++PM++++ALL QA+
Sbjct: 241 RQEAAAKKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAI 300

Query: 301 AMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQ-EDAKDSTSQPDMSKLLADQSFV 360
           AMS         + D  MS+A  +D +LALAL++S+  E++ ++T     + LL +Q+F+
Sbjct: 301 AMS---------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFI 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           SS+L+SLPGVDPNDP+VK+LLAS+  +SK  +++       EDE+K
Sbjct: 361 SSVLSSLPGVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

[Close]

BLAST of CmoCh06G001100 vs. ExPASy Swiss-Prot
Match: Q58DA0 (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus OX=9913 GN=PSMD4 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.1e-66
Identity = 166/405 (40.99%), Postives = 249/405 (61.48%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DA++++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K  + RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSND--SSHIVHVPSGPN 180
            +K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 180

Query: 181 ALSDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE 240
           +L+D LIS+PI    GEGG   A    G + F+FGVDP+ DPELALALRVSMEE+R RQE
Sbjct: 181 SLADALISSPILA--GEGG---AMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMS 300
             A+R+A  ++ +   G   +G +D        ++ +  + T    E     L    +M+
Sbjct: 241 EEARRAAAASAAE--AGIATAGTED--------SDDALLKMTISQQEFGRTGLPDLSSMT 300

Query: 301 MEDPVS---SHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVS 360
            E+ ++      +Q  E   A   D + + A+      D  + T + D   ++ D  F+ 
Sbjct: 301 EEEQIAYAMQMSLQGAEFGQAESADMDASSAM------DTSEPTKEEDDYDVMQDPEFLQ 360

Query: 361 SILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           S+L +LPGVDPN+ ++++ + S+ SQ+  + KK++++  K++E+K
Sbjct: 361 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKKEEDK 381

[Close]

BLAST of CmoCh06G001100 vs. ExPASy Swiss-Prot
Match: O35226 (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.1e-66
Identity = 168/404 (41.58%), Postives = 242/404 (59.90%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DA++++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K  + RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSND--SSHIVHVPSGPN 180
            +K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 180

Query: 181 ALSDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE 240
           +L+D LIS+PI    GEGG   A    G + F+FGVDP+ DPELALALRVSMEE+R RQE
Sbjct: 181 SLADALISSPILA--GEGG---AMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQE 240

Query: 241 VAAKRSAEETSKQEKGGELPSGAQDT-------TMNERASAECSDAQKTSDPMEDENALL 300
             A+R+A  ++ +   G    G +D+       T+N++          +S   E++   +
Sbjct: 241 EEARRAAAASAAE--AGIATPGTEDSDDALLKMTINQQEFGRPGLPDLSSMTEEEQ---I 300

Query: 301 QQALAMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQ 360
             A+ MS++    S E  D + S A                 D  D   + D   ++ D 
Sbjct: 301 AYAMQMSLQGTEFSQESADMDASSAM----------------DTSDPVKEEDDYDVMQDP 360

Query: 361 SFVSSILASLPGVDPNDPSVKDLLASMQSQSKAE---DKKNEEK 393
            F+ S+L +LPGVDPN+ +++ ++ ++ SQ+  +   DKK EEK
Sbjct: 361 EFLQSVLENLPGVDPNNAAIRSVMGALASQATKDGKNDKKEEEK 375

[Close]

BLAST of CmoCh06G001100 vs. ExPASy Swiss-Prot
Match: Q553E0 (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum OX=44689 GN=psmD4 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.4e-66
Identity = 166/393 (42.24%), Postives = 240/393 (61.07%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           M LEAT++C+DNSEWMRNGD+ PSR +AQ DA++LIC +KTQSNPE+ V +++MAGK   
Sbjct: 1   MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVT T +L KIL     L+I G+ + +  +Q+AQLAL+HRQN  Q  RII F GSP K+
Sbjct: 61  VLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKE 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
            K+ L  + K+LKKN VA+DII+FGE  +   +KLEA ++ VN+ND SH++ VP GP+ L
Sbjct: 121 TKEELIQLAKRLKKNGVAVDIINFGEVTE-NSDKLEAFINDVNNNDESHLLTVPPGPHIL 180

Query: 181 SDVLISTPIFTS-DGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEV 240
           SD+++ +PI  S  G+ GSEF             ++ + DP+LA+AL++S+EEE+ RQE 
Sbjct: 181 SDIILQSPIVESGSGQFGSEF-------------INADTDPDLAMALKLSLEEEKQRQE- 240

Query: 241 AAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSM 300
             +R A E   +  GG   SG   TT         +  +   D   +++  L +ALA+SM
Sbjct: 241 -RERKARE---EANGGSTNSGTTTTT---------APTESNMDVNFEDDPELAEALALSM 300

Query: 301 EDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILA 360
               ++ +M+    +  T   P          Q+   D TS    S+   DQ F++S L 
Sbjct: 301 ----ATDKMEVQSSTTNTDSQP------PQQQQQPPTDDTS----SEAFKDQDFLNSTLN 349

Query: 361 SLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEK 393
           SLPGVDPN   +K+ L ++  + + +DK NE+K
Sbjct: 361 SLPGVDPN--RIKNALENLSKKDEDKDKDNEKK 349

[Close]

BLAST of CmoCh06G001100 vs. ExPASy TrEMBL
Match: A0A6J1FDW2 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444822 PE=3 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 6.3e-211
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ
Sbjct: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVA 240
           SDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVA
Sbjct: 181 SDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVA 240

Query: 241 AKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSME 300
           AKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSME
Sbjct: 241 AKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSME 300

Query: 301 DPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS 360
           DPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS
Sbjct: 301 DPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS 360

Query: 361 LPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           LPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK
Sbjct: 361 LPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 400

[Close]

BLAST of CmoCh06G001100 vs. ExPASy TrEMBL
Match: A0A6J1I6B4 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470034 PE=3 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.6e-208
Identity = 394/400 (98.50%), Postives = 396/400 (99.00%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAI+LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAINLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAK 
Sbjct: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVA 240
           SDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVA
Sbjct: 181 SDVLISTPIFTSDGEGGSEFAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEVA 240

Query: 241 AKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSME 300
           AKRSAEETSKQEKGGE PSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSME
Sbjct: 241 AKRSAEETSKQEKGGEQPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALAMSME 300

Query: 301 DPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS 360
           DPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS
Sbjct: 301 DPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS 360

Query: 361 LPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           LPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKEDEEK
Sbjct: 361 LPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDEEK 400

[Close]

BLAST of CmoCh06G001100 vs. ExPASy TrEMBL
Match: A0A5A7UCD1 (26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00630 PE=3 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.8e-190
Identity = 369/403 (91.56%), Postives = 384/403 (95.29%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFT DGEGGS F    AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALA 300
           QE AAKR+AEETSKQEKGGE PSG+QDTTMNERASAE SDAQKT+DPMEDENALLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSS 360
           MSMEDP SS +++DTEMSDA + DPELALAL+LSVQE++KDSTSQPDMSKLLADQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           ILASLPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKED++
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of CmoCh06G001100 vs. ExPASy TrEMBL
Match: A0A0A0L1M0 (VWFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002730 PE=3 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.8e-190
Identity = 369/404 (91.34%), Postives = 384/404 (95.05%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFT DGEGGS F    AAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALA 300
           QE AAKR+A+ETSKQEKGGE PSG+QDTTMNERASAE SDAQKTSDPMEDENALLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSS 360
           MSMEDP SS +++DTEMSDA + DPELALAL+LSVQE++KDSTSQPDMSKLLADQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           ILASLPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKED++K
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]

BLAST of CmoCh06G001100 vs. ExPASy TrEMBL
Match: A0A1S3BKI9 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucumis melo OX=3656 GN=LOC103490683 PE=3 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.8e-190
Identity = 369/403 (91.56%), Postives = 384/403 (95.29%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DA++LICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDCKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180
           EKKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNAL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFT DGEGGS F    AAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQALA 300
           QE AAKR+AEETSKQEKGGE PSG+QDTTMNERASAE SDAQKT+DPMEDENALLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQEDAKDSTSQPDMSKLLADQSFVSS 360
           MSMEDP SS +++DTEMSDA + DPELALAL+LSVQE++KDSTSQPDMSKLLADQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEE 400
           ILASLPGVDPNDPSVKDLLASMQSQSK EDKKNEE PPKED++
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of CmoCh06G001100 vs. TAIR 10
Match: AT4G38630.1 (regulatory particle non-ATPase 10 )

HSP 1 Score: 457.2 bits (1175), Expect = 1.3e-128
Identity = 256/406 (63.05%), Postives = 325/406 (80.05%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAISLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ++A++L+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPAKQ 120
           VL TPTSDLGKIL CMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP K 
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDD-CKPEKLEALLSAVNSNDSSHIVHVPSGPNA 180
           EKK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NA
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSDVLISTPIFTSDGEGGSEF----AAASAGGAGFDFGVDPNLDPELALALRVSMEEERA 240
           LSDVL+STP+FT D EG S +    AAA+A G  FDFGVDPN+DPELALALRVSMEEERA
Sbjct: 181 LSDVLLSTPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 240

Query: 241 RQEVAAKRSAEETSKQEKGGELPSGAQDTTMNERASAECSDAQKTSDPMEDENALLQQAL 300
           RQE AAK++A+E  +++K G+  S +Q+T       A  +D  K ++PM++++ALL QA+
Sbjct: 241 RQEAAAKKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAI 300

Query: 301 AMSMEDPVSSHEMQDTEMSDATIDDPELALALKLSVQ-EDAKDSTSQPDMSKLLADQSFV 360
           AMS         + D  MS+A  +D +LALAL++S+  E++ ++T     + LL +Q+F+
Sbjct: 301 AMS---------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFI 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKAEDKKNEEKPPKEDEEK 401
           SS+L+SLPGVDPNDP+VK+LLAS+  +SK  +++       EDE+K
Sbjct: 361 SSVLSSLPGVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

The following BLAST results are available for this feature:

BLAST of CmoCh06G001100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82143	4.8e-139	69.70	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. ja...	[more]
P55034	1.9e-127	63.05	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana O...	[more]
Q58DA0	4.1e-66	40.99	26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus OX=9913 GN=PSMD4 PE...	[more]
O35226	4.1e-66	41.58	26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4...	[more]
Q553E0	5.4e-66	42.24	26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum OX=44...	[more]

BLAST of CmoCh06G001100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDW2	6.3e-211	100.00	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita moschata OX=...	[more]
A0A6J1I6B4	8.6e-208	98.50	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita maxima OX=36...	[more]
A0A5A7UCD1	2.8e-190	91.56	26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var....	[more]
A0A0A0L1M0	2.8e-190	91.34	VWFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002730 PE=3 S...	[more]
A0A1S3BKI9	2.8e-190	91.56	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucumis melo OX=3656 G...	[more]

BLAST of CmoCh06G001100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38630.1	1.3e-128	63.05	regulatory particle non-ATPase 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003903	Ubiquitin interacting motif	SMART	SM00726	uim	coord: 217..236 e-value: 11.0 score: 14.9 coord: 318..337 e-value: 0.56 score: 19.2 coord: 286..305 e-value: 0.64 score: 19.1
IPR003903	Ubiquitin interacting motif	PFAM	PF02809	UIM	coord: 219..232 e-value: 0.78 score: 9.8 coord: 286..301 e-value: 0.0096 score: 15.8 coord: 319..333 e-value: 0.26 score: 11.2
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 286..305 score: 9.512624
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 217..236 score: 8.934976
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 2..175 e-value: 3.0E-11 score: 53.4
IPR002035	von Willebrand factor, type A	PFAM	PF13519	VWA_2	coord: 6..115 e-value: 5.3E-27 score: 94.6
IPR002035	von Willebrand factor, type A	PROSITE	PS50234	VWFA	coord: 5..189 score: 11.908252
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 3..186 e-value: 2.7E-79 score: 267.1
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 4..175
None	No IPR available	GENE3D	1.10.287.3990		coord: 215..300 e-value: 3.0E-17 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..320
None	No IPR available	PANTHER	PTHR10223:SF6	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1	coord: 1..399
None	No IPR available	PANTHER	PTHR10223	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4	coord: 1..399
None	No IPR available	CDD	cd01452	VWA_26S_proteasome_subunit	coord: 1..188 e-value: 3.32517E-107 score: 311.606

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001100.1	CmoCh06G001100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding