CmoCh06G001060 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAGGTGTTGCTTGCTCCCCTAAATGCTTAATAGATTTTAGAAGCTACAAAACCTATCACTTTTAATGTTGTCAAAGAGATTGGTTTAAAAGGTGATACCTCTAAAGCTTTGAGAATGACCTATTCTGGGTGGAGATTGCTAACTGTGCTCTCACAGGTGTGGAAAATGGGGAGCAAATTGCAATAGAGGTAGTACCGGAGGAAGAAATTGTAGCATCATTGCAATTCACTGCAATTACGAACAACCCGAGACGATTCCCTTTTGCCTTCCAGGCCAAAAAGAGAGGCAACATTTCTTCCATGAATTCTCTTTTCTTACATTCTTCTCTTGGTCCACCACTTGCTTGCAAGCCCCTGCCATGTCCTCTTAAGAATCCTATACATATGCGTGCACTACTTGGCTTTCGATGCAGTACTAGGATATTTTCTCGTTCGGCATTATTTCCTGTCAAATTATGTCCATCCTTACATATTAGCAGATCAATCACCTGTTCTTCAACTCCTTCAAATGAGGGTGTGGTATCAGTGATCAATTTTGAAGATTTAGTTGAGAAGGACTTTTCGTTTCTCGATTCAGACGATTTTGGTTCTATAGAAGAGCATGATGAAAAGATTAGGCGCATCATTTCTGCTGGAGAAATTGCAGAAAGTTCTCAGGTTATGGTTGCCATTTCTTCAGAAGGATTTGTTGATCGGTTGTATGACTCAGCTCCTTGCCGAAGTTTACTTGTTGTCCATGATGCTATTCTACCATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGCTGGCAAGGAGAAGTTATATATGTGCCAGAAAAATGGGGACCTTTCGACGTTGTATTTCTCTATTATCTGCCAGCAATGCCTTTTGAACTCGACGCGATCTTTGGCGCACTCACACAACGTTGTTTGCCAGGTGATTTTTTTTCTTTTTTTGCATAGTTTCTTACCATCTTTGTTCGATCTCCAGATCATAAGTTATGGATTTGAGCAATTAGTTTTTACCTTGCCTCCAAGATATATCATTAGTCCTTGGGGCAATGTTGAGATATATTGCGACATAATCTGTTAGTTCCTTTAGAAAATAAAACCACATGGAAATGAAAACTTGCTTGTTTTATAGAGTCTATTACAGCCCTAAGGTAATCTATTTCCTTCTTGCTCAATAGGGGGAAGACTAGTTATTAGCCATCCCGGTGGAAGGAAAGTGTTACAGCAAGAACAGCAACAGTTCTCAGATGTCGTAGTTTCGGATTTACCTGATAGGACTACTTTGCAGAAAGTTGCTGCTGATCACTCTTTTGGCCTGACTGAATTTGTAGATGAGGATGGCTTTTATCTTGCAGTTTTGAAGTTCAACAAGGATTGATCACGAGTCTGAATATTTCATCAGAGGCCAGCAGTTCAATATCTAAGTCCTGCTGCAAAATCTTACCAAATTTGGATAAACCAAATGTTGATGTTTTTGTCATTGATCATTGAGTATCATTTCCAGGTGGTAGTGCGAAGGATCAAGTTTGATATTCTCTGATCCTTGTTGGTTGCTTAAATTCCATCCAACAAGACTGTTACAGTTCTTGCTATTTTATGAAATCCTGAATCAGATAAAGTTCCTAACATGTGTTTGGGTGAAAAAATGATGATGATAACTAGATGAGTAAGATCACAAGTTACAGGGGAGATTACTGTGCTTGCACTAGTGCTTGTGCCTGTGCTGGCTGTATGTTAACTAAAATGTGTATTATCTCATGGACGAGGTTGAGCTTCAGGTCCTGGTGGTTTTGAAGAATTTAGAAGCGGCTGGAGAGCCTTAACCACAATTGTCATGTTTGGCCTGAAGTCAGCCTCGTACTGAACACACAAGGCTGCAACTGCTGCCAACTGAGAGGGATTCACATGGAAATTATAGTGGAATAAGTTTCCTATCCAATCCAATCCGAAACATCTACGACAATGATGAAAACTAACATGCATTGGATCGTTGATTAGCGGGTAATCGTTGATTTAGTTATAAAAACATGTTCTATGATTTGAATATGAATGTGATTACACAGTTGAAGATACCTTTGCTATCGCTTTTGGTGGGTAATCGTTGTTTAGCTTGGGATCTACACACTGTTTCACCTTGTCCTCACTTAATCTTGGTGTTGCCTGCAGAACAATATGAATGGCAAATTGAGTCTGAGTATACTTCAGGCAGTAGGAAGAAAGTAGAGAAAGGGAAGACTTACCCAAGTAACAAGACTCTGTTGTCCCTTAGGCATCGTGTGATCTACTGGCTTTCGTCCTGTCAAAAGTTCGAGAAGAACTACGCCAAAACTATAAACGTCACTCTTTTGAGTAATCTGTCCTGTCATAGCATACCTAAAAAGAGAAACCAAAGAAAGGAAGTTGAAAGAGTTTAGTCTTACTTTCAACTCAATCCGATGCAATGCAATATGGGAGAATATGAAATGATAAGCTTTAAGTTAAAATTCAA ATGTTCAGCTTTGAGAATGACCTATTCTGGGTGGAGATTGCTAACTGTGCTCTCACAGGTGTGGAAAATGGGGAGCAAATTGCAATAGAGGTAGTACCGGAGGAAGAAATTGTAGCATCATTGCAATTCACTGCAATTACGAACAACCCGAGACGATTCCCTTTTGCCTTCCAGGCCAAAAAGAGAGGCAACATTTCTTCCATGAATTCTCTTTTCTTACATTCTTCTCTTGGTCCACCACTTGCTTGCAAGCCCCTGCCATGTCCTCTTAAGAATCCTATACATATGCGTGCACTACTTGGCTTTCGATGCAGTACTAGGATATTTTCTCGTTCGGCATTATTTCCTGTCAAATTATGTCCATCCTTACATATTAGCAGATCAATCACCTGTTCTTCAACTCCTTCAAATGAGGGTGTGGTATCAGTGATCAATTTTGAAGATTTAGTTGAGAAGGACTTTTCGTTTCTCGATTCAGACGATTTTGGTTCTATAGAAGAGCATGATGAAAAGATTAGGCGCATCATTTCTGCTGGAGAAATTGCAGAAAGTTCTCAGGTTATGGTTGCCATTTCTTCAGAAGGATTTGTTGATCGGTTGTATGACTCAGCTCCTTGCCGAAGTTTACTTGTTGTCCATGATGCTATTCTACCATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGCTGGCAAGGAGAAGTTATATATGTGCCAGAAAAATGGGGACCTTTCGACGTTGTATTTCTCTATTATCTGCCAGCAATGCCTTTTGAACTCGACGCGATCTTTGGCGCACTCACACAACGTTGTTTGCCAGGGGGAAGACTAGTTATTAGCCATCCCGGTGGAAGGAAAGTGTTACAGCAAGAACAGCAACAGTTCTCAGATGTCGTAGTTTCGGATTTACCTGATAGGACTACTTTGCAGAAAGTTGCTGCTGATCACTCTTTTGGCCTGACTGAATTTGTAGATGAGGATGGCTTTTATCTTGCAGTTTTGAAGTTCAACAAGGATTGATCACGAGTCTGAATATTTCATCAGAGGCCAGCAGTTCAATATCTAAGTCCTGCTGCAAAATCTTACCAAATTTGGATAAACCAAATGTTGATGTTTTTGTCATTGATCATTGAGTATCATTTCCAGGTGGTAGTGCGAAGGATCAAGTTTGATATTCTCTGATCCTTGTTGGTTGCTTAAATTCCATCCAACAAGACTGTTACAGTTCTTGCTATTTTATGAAATCCTGAATCAGATAAAGTTCCTAACATGTGTTTGGGTGAAAAAATGATGATGATAACTAGATGAGTAAGATCACAAGTTACAGGGGAGATTACTGTGCTTGCACTAGTGCTTGTGCCTGTGCTGGCTGTATGTTAACTAAAATGTGTATTATCTCATGGACGAGGTTGAGCTTCAGGTCCTGGTGGTTTTGAAGAATTTAGAAGCGGCTGGAGAGCCTTAACCACAATTGTCATGTTTGGCCTGAAGTCAGCCTCGTACTGAACACACAAGGCTGCAACTGCTGCCAACTGAGAGGGATTCACATGGAAATTATAGTGGAATAAGTTTCCTATCCAATCCAATCCGAAACATCTACGACAATGATGAAAACTAACATGCATTGGATCGTTGATTAGCGGAACAATATGAATGGCAAATTGAGTCTGAGTATACTTCAGGCAGTAGGAAGAAAGTAGAGAAAGGGAAGACTTACCCAAGTAACAAGACTCTGTTGTCCCTTAGGCATCGTGTGATCTACTGGCTTTCGTCCTGTCAAAAGTTCGAGAAGAACTACGCCAAAACTATAAACGTCACTCTTTTGAGTAATCTGTCCTGTCATAGCATACCTAAAAAGAGAAACCAAAGAAAGGAAGTTGAAAGAGTTTAGTCTTACTTTCAACTCAATCCGATGCAATGCAATATGGGAGAATATGAAATGATAAGCTTTAAGTTAAAATTCAA ATGTTCAGCTTTGAGAATGACCTATTCTGGGTGGAGATTGCTAACTGTGCTCTCACAGGTGTGGAAAATGGGGAGCAAATTGCAATAGAGGTAGTACCGGAGGAAGAAATTGTAGCATCATTGCAATTCACTGCAATTACGAACAACCCGAGACGATTCCCTTTTGCCTTCCAGGCCAAAAAGAGAGGCAACATTTCTTCCATGAATTCTCTTTTCTTACATTCTTCTCTTGGTCCACCACTTGCTTGCAAGCCCCTGCCATGTCCTCTTAAGAATCCTATACATATGCGTGCACTACTTGGCTTTCGATGCAGTACTAGGATATTTTCTCGTTCGGCATTATTTCCTGTCAAATTATGTCCATCCTTACATATTAGCAGATCAATCACCTGTTCTTCAACTCCTTCAAATGAGGGTGTGGTATCAGTGATCAATTTTGAAGATTTAGTTGAGAAGGACTTTTCGTTTCTCGATTCAGACGATTTTGGTTCTATAGAAGAGCATGATGAAAAGATTAGGCGCATCATTTCTGCTGGAGAAATTGCAGAAAGTTCTCAGGTTATGGTTGCCATTTCTTCAGAAGGATTTGTTGATCGGTTGTATGACTCAGCTCCTTGCCGAAGTTTACTTGTTGTCCATGATGCTATTCTACCATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGCTGGCAAGGAGAAGTTATATATGTGCCAGAAAAATGGGGACCTTTCGACGTTGTATTTCTCTATTATCTGCCAGCAATGCCTTTTGAACTCGACGCGATCTTTGGCGCACTCACACAACGTTGTTTGCCAGGGGGAAGACTAGTTATTAGCCATCCCGGTGGAAGGAAAGTGTTACAGCAAGAACAGCAACAGTTCTCAGATGTCGTAGTTTCGGATTTACCTGATAGGACTACTTTGCAGAAAGTTGCTGCTGATCACTCTTTTGGCCTGACTGAATTTGTAGATGAGGATGGCTTTTATCTTGCAGTTTTGAAGTTCAACAAGGATTGA MFSFENDLFWVEIANCALTGVENGEQIAIEVVPEEEIVASLQFTAITNNPRRFPFAFQAKKRGNISSMNSLFLHSSLGPPLACKPLPCPLKNPIHMRALLGFRCSTRIFSRSALFPVKLCPSLHISRSITCSSTPSNEGVVSVINFEDLVEKDFSFLDSDDFGSIEEHDEKIRRIISAGEIAESSQVMVAISSEGFVDRLYDSAPCRSLLVVHDAILPLACIKEKYDKVKCWQGEVIYVPEKWGPFDVVFLYYLPAMPFELDAIFGALTQRCLPGGRLVISHPGGRKVLQQEQQQFSDVVVSDLPDRTTLQKVAADHSFGLTEFVDEDGFYLAVLKFNKD Homology
BLAST of CmoCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1FPV5 (uncharacterized protein LOC111445889 OS=Cucurbita moschata OX=3662 GN=LOC111445889 PE=4 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 3.6e-154 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
BLAST of CmoCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1I6B9 (uncharacterized protein LOC111470036 OS=Cucurbita maxima OX=3661 GN=LOC111470036 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.7e-151 Identity = 269/273 (98.53%), Postives = 269/273 (98.53%), Query Frame = 0
BLAST of CmoCh06G001060 vs. ExPASy TrEMBL
Match: A0A6J1DD17 (uncharacterized protein LOC111019361 OS=Momordica charantia OX=3673 GN=LOC111019361 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 2.0e-117 Identity = 214/273 (78.39%), Postives = 238/273 (87.18%), Query Frame = 0
BLAST of CmoCh06G001060 vs. ExPASy TrEMBL
Match: A0A5D3DP12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005240 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 4.0e-113 Identity = 213/275 (77.45%), Postives = 230/275 (83.64%), Query Frame = 0
BLAST of CmoCh06G001060 vs. ExPASy TrEMBL
Match: A0A1S3B7V6 (uncharacterized protein LOC103486747 OS=Cucumis melo OX=3656 GN=LOC103486747 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 4.0e-113 Identity = 213/275 (77.45%), Postives = 230/275 (83.64%), Query Frame = 0
BLAST of CmoCh06G001060 vs. TAIR 10
Match: AT2G41950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 266.5 bits (680), Expect = 2.8e-71 Identity = 133/213 (62.44%), Postives = 167/213 (78.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|