Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCGTGGTTCTATCTTCACCGTAGGGTTTATCTCCGATTCCACTCGCCACCGTTTCTCTCTGCCGCAATGGGCGGAGCCACCAGGTTCTTCGTCCTCCTATCCACTCCTCTTCCTCTCATTCACCACCACCGCCGCCCTTCCTTTCTCCGCCTCGCCTCTCACTACCACAACTTCTTCCGATCTTCTCTTAAGCCCAGAAACAGATTCTTATCCCCTTCCTTTCCCCTAATTAGAGCCTCTCGCCATGTCCATTCCCAGGTCTCCACTCCAGGGGATGAGTTCGGGAATTTTGAAGAATCTGGGTCCGTCAATGGCGTGTTTTCTCCGGATTCTTATATTTGGCGAGAATGGTCCAATTTCCTCGGGAGCCTCGACTCCGGTGGCTATTTTGGTAGTCCGGGTTCTGGGAATGAGTTCGTCGCTGTTCAGGAGCTGCCAGCTGAGTTTGTGAATGCGGCTAATGCGTGCTTGGCATTTTCCCGCGGCCGTGAACATCTCTTAGGGTTCGTTTTGTGCTCTGTATACTAAAAGGAAGCCAATTTGTTATCGATCATTACCTTCTTGTATTTGTTTATTTATTTATTTTTACTGTGGCAGATTGCTTCCTAGGAGGGATATTGAGGTGTTGGTTGAAAGCGTGAACCCATGTCTGTTCAGAGACGGGGATGCTTCATTGAGGAAGATGAAGTTGTTCTTACAAGGCGATGAAACTCAGGTAAGTATGGATTCCAGATTAGTATCTGTTAGTTCTTCATAATTGCTTGTGTTTGTTTCAGAAGTGTTTTAGAGTGCTCTTTTGATCTCAGGGGGCTATATTAACATTGACACTATCTAAGTGACCAAATAACACATCAAACTAAGGGAGTCTTGGATAAAAATGATAATATATTTTTTTAAGTGGAAGTTTTAATAAATGTGTCTTTGTTGTGTTCATATCCTAGATAAATGACGTGTCACAATGTACATGTCATGTCGTATCCGTGTCTCGTATCCATATCCATATCTTTTCTTATTAGGCTCCACCAAGTACCACACCCCTAGCTCATGGATCTCATAGTTGTCTATGCGTCCTATAACTAGTCACAAGCTTAATGGATGCAATTATCTATCATGTTCATGATTAGTTCTAATGTTTGTATGCAAGAGGAGAAGGGATGACTATATTCTTGGAACAAGTACAAAGTGAAATGTTACTGGAGTTAAGATGACGAAAGCAGAGATTAACATGATGACGTGTTGGTTCATCAATTTTATGATTACTGAGACAGGGAAGAAGTTCCTGCCCTGTTTTTTATATGAATTTGCAATGGAAAATTTGGATGCAAACAAGGAAACATTTGATGATCTAGGAAATACCAGTCTTTTGAAATTGAAGGTGGTTACGTGACTGGAGGCAAGGGGAGATAGCAGTGACCAAGTATTGCAGTCCCTTACTCACTTACGGAAACAATTAGGTCTCTATGAGATTTAATAATACGGAATGCACCAATGACATTTCATGGTACCAAAAGTTTCAAATTCCTTCTTGGATAAGTTTGAAGATACACTGTAGCAATCAAGCCCCTAGAAATGAAGAAGGATGAAAGACACTATACTGAGAAGAAAGTCGAGTACAAACTCTTCTAACTCAAGTCCTATTAATTTGATTTTAATTTCTCAAATTAATGTTCAATTTAATGCAAATAACTGTCCTTGAAAAGAAAGACCATAATGTGTACACCGTGAGAAATTTGTGATACCAAAGTCTGTTGAACTTAGTACACTGCAAGATATGGGGAGCACTTGAGAATACGAACCTTTATAATAACTCTGTTTCTTGCATTGATTGCAACTTGGGACATTTTTGTAACCCTTAGGCTTTGGGTTGGGAGACAAGGATACCTTGCCATGGTTAAAAGGGTTTTTACTAAGGAAGCAAAATGTGGTTGGAAGCGCACAGAGGAAATGAGTGTACTGTTTTTGTTTGTTTTTTAAAGTGTCGTAGCCTTTTTAGCTGTGATTAGTTCATGTTTTGACTTTATTGTTTACAAATATCCAACTTTAATTAGGTTTATATTTCTGCCTCCCATATAGCAATGGATTAATTCTTTCATCAAGAAGAATTTCTATTTCCATTTTTACTTCATTTATTCCAGCCCCTGATTTTGCGAGTGTTAAAACCACTTCACAATATTCACTTGTGCTATCACCATTGGTAGGTTTTGGATTCTGATAAAGCAAGGACGATTGATTTATTCAAATTTATCTTGAGCTATGCCAGAAACCCGACTGTTTCTTCAGAAAGTAATCTGTACAGTAGAGATCAGGTAGAATCATCTATGAGGAATCTGTTAAGTGAAATATGCAAGCTTTGTTTTAGCAATCCAGATCCGAAGCTTTTGGAGACAGACAATCAATTTTCTGACAAATATAGCCAATCACGTGGGCCGTATGGGCCAAAAGTTGAAATGAAAAGAGGGGACTGGATTTGTCCAAGGTAGATATTCATTTATTTTGCTACCTTTTATACTGCTATGGTTGTATCTTCAAATGTTTGTGCCTCTTCTGGTTGTATCTTTGCTGTATTCTGATCTAGCACGTAAAGTATGTTTGTGCCCTACTGAGATAATCTGTTTTGGATATTTACGAGTGTAGATGTAGTTTCATGAACTTCGCAAGAAATGTGAAATGCCTTGAATGCGAGGAGGCCCGACCAAAGCGACAGCTGATTGGTGGAGAATGGGAATGCCCTCAGTACGGAGTGATTCTCTACTTTCTCAGACTTGATACATCTTTCCATTTCCCCTGTTCTGAATGACTAAATTAAACTTTCATTCTGATTACTTTGGCAGATGTGATTTTTTCAATTATGGGAGGAATACAGTGTGCTTAAGGTGTGATTGCAAAAGGCCAGGGCCTCCATCTCTCAGTAACATTAACATAAATTCTGGTTTAGGGAATGACAATGGAAGTCACACAATTAAGGTTGATATCGATAGTAAGTTGGCTGCAAATGAAGAGAAGGCTCAGCGCTGGTTTAGTAAGATTTCTCAGCTGGACAGTACTTCTGATTCGGGCTCCTCAATAACAGATGAAGATTTCCCTGAAATAATGCCATTGAGAAAAGGAGTTAACAGATTTGTTGTGAGCACGAGGAAGACGCCTCTGGAGAGGAGGTTGGCTAATGCTCAATACAGAAGAAATTTGGGCAACGATGGAGTTCCAGAAAATAACAGCAGTGAACTGTCTGCTTCTAACAATTCTCTTGACAAAACAACAAGCCATGATGACATTCTTGGTCGCCTATCCACTAATTCTCAATCCACGAATTTTGGAAACGAGCAAGGTATTCGTACCAATTATACTTTATCATCCACTTCAGGTTCTTCGCAATATGAGTCCCCGAAAGGAGGTAATTCCAGTTATGTTCCATTTGTTCCATTACCCCCAGATATGTTTGCGAAAAAGCCTAAGAATTCAAGCATGGAGAGTGAGGTAGTTGGTACTGATAATAACAAATCCCTTCCATCAAGCTCTAATGAGTGGACAGGCAGTACTTCCCAGAGCAATGGATTGAACGAAGTAGGAGATATTCCTTCTCCACCGCAGAATCCGACTCAGAAAATTAATGAAGGGAAGGAGGAAACTGAAAAATCTGAGAGATGGTTTAAAAGGGTTGCCGAACTGCACAACGTGACAGATCTTCCTAGTGCAATTTCTGATGAAGACTTCCCTGAGATCATGCCAATGCGCAAGGGAGAAAATAGATTTGTTGTCAGTAAGAAGAAAGACCGCTCTTTAACGTCTCCAGCTTATAAGAGGCGTGCTGCCATGGAGCAAGCTGGCAGTTCCAACTTTGTCCCCTTTGTTCCTTTCCCACCGGACTATTTTGCAAAAAAAGATAAGGCCTTGTCAGATGATTCAAATAGTCAAGTGACTGAGACCTTCTCAGATGATTCAAATGGTCAAGTGACTGAAGCTCAGTCATACGACACTAGCATTGGTATCGATGATAGAAGTAACTCTCAACAGTCTGATAATCTAGAAACTCAAGCAGGCAGGTTCAACTCAGAACTCCATACACGGAATTCCAGTCGGAGCGATGAAGCTACAGCATACGGAGTACCCAACATTCAAAGTCTAGACACAAATTTGGTTAGCTCTCAACCTGGTCACAAGAATGTGGCGAATAACAACACAAGTGTAGCGGGAAATCCGTCTCCAGCATCCGAGATGCCAAACGTAAGAGAGAAATGGAGTGGAAAAAGTTTGGAGGGTTCAGCGGTCACTGAACCAGATCCATTGGACATGTCAGAGGAGGCTAAAGTGCAAAGATGGTTCCGTCGTGTTGCTCAGATCAAGGACATCTCTGAGCTAAGTCAGATTCCGGACGAAGATTTTCCATCGATCATGCCAATGCGCAAAGGTGTCAACAGGTTTGTAGTCAGCAAGAGGAAAACTCCATTGGAAAGAAGGTTAACATCACCTCAATACAGAAGAAATCTGCCCATTGTTAGTTCAGACCCACCAAAGCGAGAAAATGATGGCAGTTAGAAACACCCAGCGTTCTTCAATTTCTTTCATAAACTGAGATTATTGGTATTGGTTTGTTCTTTACCGTGAAAAAGAAAGGAACTTCAAATATGGCTTTTATAACTTAAAATCTTGGTTATTGATTAAATTGAATTGAATAGTAGTTCAACCACATAATTGATAAGTATTGTGTGCAAGGGAAGAAATGGCTGGACAAATTCCTATCAGGCCTCCTTGCTCTTGTAAATGAGCTATCTGAGATGCATTATGGTAGGAATGTTTTCTGATGGATTGGATTGGTTTGGTTGGATTCTTTGTTAGATGATTCGTGGTTAGGTGTTGAATAGATGGTCTTATTGGGTGTTTGTCGCGTGTTTATGGGATGGAGAGGGGGAATCAGAAGCTTTATGTTGCTGTGTGAGAGCCTCCACGGGGTAAGTTTCACACGAGTTTTGTGTCGTTTCTCGATTGCTATTGATTTTAGAAAGGGATATTGCAATGATTTTGGTATGGATTTGAGTAATACACCCCCTTGATCAGGACCGAACCAATGATTTTGGTTTCAGGACGAATGATGATGAAATTGAAACTAATTGGGTGTAAATAGAAGAACCGATTGAAAAGTAGGGAATGATTCAAGTGGGAGTACAACATGTCTAGTAGGAATGATTCAAGTCATAAATCCCGAGATTTCAACGTCTCTATGCCCAAAATGTTGCCACAAAGCCGGGGAGTTTTCATCCTTAACATCTTAACGTCGCAGTAGAGTATCTCGACACTATCCTTCATTCGCTTAGGTGTCTCAACACTATCTTATTTTCTATATATA
mRNA sequence
TCTCGTGGTTCTATCTTCACCGTAGGGTTTATCTCCGATTCCACTCGCCACCGTTTCTCTCTGCCGCAATGGGCGGAGCCACCAGGTTCTTCGTCCTCCTATCCACTCCTCTTCCTCTCATTCACCACCACCGCCGCCCTTCCTTTCTCCGCCTCGCCTCTCACTACCACAACTTCTTCCGATCTTCTCTTAAGCCCAGAAACAGATTCTTATCCCCTTCCTTTCCCCTAATTAGAGCCTCTCGCCATGTCCATTCCCAGGTCTCCACTCCAGGGGATGAGTTCGGGAATTTTGAAGAATCTGGGTCCGTCAATGGCGTGTTTTCTCCGGATTCTTATATTTGGCGAGAATGGTCCAATTTCCTCGGGAGCCTCGACTCCGGTGGCTATTTTGGTAGTCCGGGTTCTGGGAATGAGTTCGTCGCTGTTCAGGAGCTGCCAGCTGAGTTTGTGAATGCGGCTAATGCGTGCTTGGCATTTTCCCGCGGCCGTGAACATCTCTTAGGATTGCTTCCTAGGAGGGATATTGAGGTGTTGGTTGAAAGCGTGAACCCATGTCTGTTCAGAGACGGGGATGCTTCATTGAGGAAGATGAAGTTGTTCTTACAAGGCGATGAAACTCAGGTTTTGGATTCTGATAAAGCAAGGACGATTGATTTATTCAAATTTATCTTGAGCTATGCCAGAAACCCGACTGTTTCTTCAGAAAGTAATCTGTACAGTAGAGATCAGGTAGAATCATCTATGAGGAATCTGTTAAGTGAAATATGCAAGCTTTGTTTTAGCAATCCAGATCCGAAGCTTTTGGAGACAGACAATCAATTTTCTGACAAATATAGCCAATCACGTGGGCCGTATGGGCCAAAAGTTGAAATGAAAAGAGGGGACTGGATTTGTCCAAGATGTAGTTTCATGAACTTCGCAAGAAATGTGAAATGCCTTGAATGCGAGGAGGCCCGACCAAAGCGACAGCTGATTGGTGGAGAATGGGAATGCCCTCAATGTGATTTTTTCAATTATGGGAGGAATACAGTGTGCTTAAGGTGTGATTGCAAAAGGCCAGGGCCTCCATCTCTCAGTAACATTAACATAAATTCTGGTTTAGGGAATGACAATGGAAGTCACACAATTAAGGTTGATATCGATAGTAAGTTGGCTGCAAATGAAGAGAAGGCTCAGCGCTGGTTTAGTAAGATTTCTCAGCTGGACAGTACTTCTGATTCGGGCTCCTCAATAACAGATGAAGATTTCCCTGAAATAATGCCATTGAGAAAAGGAGTTAACAGATTTGTTGTGAGCACGAGGAAGACGCCTCTGGAGAGGAGGTTGGCTAATGCTCAATACAGAAGAAATTTGGGCAACGATGGAGTTCCAGAAAATAACAGCAGTGAACTGTCTGCTTCTAACAATTCTCTTGACAAAACAACAAGCCATGATGACATTCTTGGTCGCCTATCCACTAATTCTCAATCCACGAATTTTGGAAACGAGCAAGGTATTCGTACCAATTATACTTTATCATCCACTTCAGGTTCTTCGCAATATGAGTCCCCGAAAGGAGGTAATTCCAGTTATGTTCCATTTGTTCCATTACCCCCAGATATGTTTGCGAAAAAGCCTAAGAATTCAAGCATGGAGAGTGAGGTAGTTGGTACTGATAATAACAAATCCCTTCCATCAAGCTCTAATGAGTGGACAGGCAGTACTTCCCAGAGCAATGGATTGAACGAAGTAGGAGATATTCCTTCTCCACCGCAGAATCCGACTCAGAAAATTAATGAAGGGAAGGAGGAAACTGAAAAATCTGAGAGATGGTTTAAAAGGGTTGCCGAACTGCACAACGTGACAGATCTTCCTAGTGCAATTTCTGATGAAGACTTCCCTGAGATCATGCCAATGCGCAAGGGAGAAAATAGATTTGTTGTCAGTAAGAAGAAAGACCGCTCTTTAACGTCTCCAGCTTATAAGAGGCGTGCTGCCATGGAGCAAGCTGGCAGTTCCAACTTTGTCCCCTTTGTTCCTTTCCCACCGGACTATTTTGCAAAAAAAGATAAGGCCTTGTCAGATGATTCAAATAGTCAAGTGACTGAGACCTTCTCAGATGATTCAAATGGTCAAGTGACTGAAGCTCAGTCATACGACACTAGCATTGGTATCGATGATAGAAGTAACTCTCAACAGTCTGATAATCTAGAAACTCAAGCAGGCAGGTTCAACTCAGAACTCCATACACGGAATTCCAGTCGGAGCGATGAAGCTACAGCATACGGAGTACCCAACATTCAAAGTCTAGACACAAATTTGGTTAGCTCTCAACCTGGTCACAAGAATGTGGCGAATAACAACACAAGTGTAGCGGGAAATCCGTCTCCAGCATCCGAGATGCCAAACGTAAGAGAGAAATGGAGTGGAAAAAGTTTGGAGGGTTCAGCGGTCACTGAACCAGATCCATTGGACATGTCAGAGGAGGCTAAAGTGCAAAGATGGTTCCGTCGTGTTGCTCAGATCAAGGACATCTCTGAGCTAAGTCAGATTCCGGACGAAGATTTTCCATCGATCATGCCAATGCGCAAAGGTGTCAACAGGTTTGTAGTCAGCAAGAGGAAAACTCCATTGGAAAGAAGGTTAACATCACCTCAATACAGAAGAAATCTGCCCATTGTTAGTTCAGACCCACCAAAGCGAGAAAATGATGGCAGTTAGAAACACCCAGCGTTCTTCAATTTCTTTCATAAACTGAGATTATTGGTATTGGTTTGTTCTTTACCGTGAAAAAGAAAGGAACTTCAAATATGGCTTTTATAACTTAAAATCTTGGTTATTGATTAAATTGAATTGAATAGTAGTTCAACCACATAATTGATAAGTATTGTGTGCAAGGGAAGAAATGGCTGGACAAATTCCTATCAGGCCTCCTTGCTCTTGTAAATGAGCTATCTGAGATGCATTATGGTAGGAATGTTTTCTGATGGATTGGATTGGTTTGGTTGGATTCTTTGTTAGATGATTCGTGGTTAGGTGTTGAATAGATGGTCTTATTGGGTGTTTGTCGCGTGTTTATGGGATGGAGAGGGGGAATCAGAAGCTTTATGTTGCTGTGTGAGAGCCTCCACGGGGTAAGTTTCACACGAGTTTTGTGTCGTTTCTCGATTGCTATTGATTTTAGAAAGGGATATTGCAATGATTTTGGTATGGATTTGAGTAATACACCCCCTTGATCAGGACCGAACCAATGATTTTGGTTTCAGGACGAATGATGATGAAATTGAAACTAATTGGGTGTAAATAGAAGAACCGATTGAAAAGTAGGGAATGATTCAAGTGGGAGTACAACATGTCTAGTAGGAATGATTCAAGTCATAAATCCCGAGATTTCAACGTCTCTATGCCCAAAATGTTGCCACAAAGCCGGGGAGTTTTCATCCTTAACATCTTAACGTCGCAGTAGAGTATCTCGACACTATCCTTCATTCGCTTAGGTGTCTCAACACTATCTTATTTTCTATATATA
Coding sequence (CDS)
ATGGGCGGAGCCACCAGGTTCTTCGTCCTCCTATCCACTCCTCTTCCTCTCATTCACCACCACCGCCGCCCTTCCTTTCTCCGCCTCGCCTCTCACTACCACAACTTCTTCCGATCTTCTCTTAAGCCCAGAAACAGATTCTTATCCCCTTCCTTTCCCCTAATTAGAGCCTCTCGCCATGTCCATTCCCAGGTCTCCACTCCAGGGGATGAGTTCGGGAATTTTGAAGAATCTGGGTCCGTCAATGGCGTGTTTTCTCCGGATTCTTATATTTGGCGAGAATGGTCCAATTTCCTCGGGAGCCTCGACTCCGGTGGCTATTTTGGTAGTCCGGGTTCTGGGAATGAGTTCGTCGCTGTTCAGGAGCTGCCAGCTGAGTTTGTGAATGCGGCTAATGCGTGCTTGGCATTTTCCCGCGGCCGTGAACATCTCTTAGGATTGCTTCCTAGGAGGGATATTGAGGTGTTGGTTGAAAGCGTGAACCCATGTCTGTTCAGAGACGGGGATGCTTCATTGAGGAAGATGAAGTTGTTCTTACAAGGCGATGAAACTCAGGTTTTGGATTCTGATAAAGCAAGGACGATTGATTTATTCAAATTTATCTTGAGCTATGCCAGAAACCCGACTGTTTCTTCAGAAAGTAATCTGTACAGTAGAGATCAGGTAGAATCATCTATGAGGAATCTGTTAAGTGAAATATGCAAGCTTTGTTTTAGCAATCCAGATCCGAAGCTTTTGGAGACAGACAATCAATTTTCTGACAAATATAGCCAATCACGTGGGCCGTATGGGCCAAAAGTTGAAATGAAAAGAGGGGACTGGATTTGTCCAAGATGTAGTTTCATGAACTTCGCAAGAAATGTGAAATGCCTTGAATGCGAGGAGGCCCGACCAAAGCGACAGCTGATTGGTGGAGAATGGGAATGCCCTCAATGTGATTTTTTCAATTATGGGAGGAATACAGTGTGCTTAAGGTGTGATTGCAAAAGGCCAGGGCCTCCATCTCTCAGTAACATTAACATAAATTCTGGTTTAGGGAATGACAATGGAAGTCACACAATTAAGGTTGATATCGATAGTAAGTTGGCTGCAAATGAAGAGAAGGCTCAGCGCTGGTTTAGTAAGATTTCTCAGCTGGACAGTACTTCTGATTCGGGCTCCTCAATAACAGATGAAGATTTCCCTGAAATAATGCCATTGAGAAAAGGAGTTAACAGATTTGTTGTGAGCACGAGGAAGACGCCTCTGGAGAGGAGGTTGGCTAATGCTCAATACAGAAGAAATTTGGGCAACGATGGAGTTCCAGAAAATAACAGCAGTGAACTGTCTGCTTCTAACAATTCTCTTGACAAAACAACAAGCCATGATGACATTCTTGGTCGCCTATCCACTAATTCTCAATCCACGAATTTTGGAAACGAGCAAGGTATTCGTACCAATTATACTTTATCATCCACTTCAGGTTCTTCGCAATATGAGTCCCCGAAAGGAGGTAATTCCAGTTATGTTCCATTTGTTCCATTACCCCCAGATATGTTTGCGAAAAAGCCTAAGAATTCAAGCATGGAGAGTGAGGTAGTTGGTACTGATAATAACAAATCCCTTCCATCAAGCTCTAATGAGTGGACAGGCAGTACTTCCCAGAGCAATGGATTGAACGAAGTAGGAGATATTCCTTCTCCACCGCAGAATCCGACTCAGAAAATTAATGAAGGGAAGGAGGAAACTGAAAAATCTGAGAGATGGTTTAAAAGGGTTGCCGAACTGCACAACGTGACAGATCTTCCTAGTGCAATTTCTGATGAAGACTTCCCTGAGATCATGCCAATGCGCAAGGGAGAAAATAGATTTGTTGTCAGTAAGAAGAAAGACCGCTCTTTAACGTCTCCAGCTTATAAGAGGCGTGCTGCCATGGAGCAAGCTGGCAGTTCCAACTTTGTCCCCTTTGTTCCTTTCCCACCGGACTATTTTGCAAAAAAAGATAAGGCCTTGTCAGATGATTCAAATAGTCAAGTGACTGAGACCTTCTCAGATGATTCAAATGGTCAAGTGACTGAAGCTCAGTCATACGACACTAGCATTGGTATCGATGATAGAAGTAACTCTCAACAGTCTGATAATCTAGAAACTCAAGCAGGCAGGTTCAACTCAGAACTCCATACACGGAATTCCAGTCGGAGCGATGAAGCTACAGCATACGGAGTACCCAACATTCAAAGTCTAGACACAAATTTGGTTAGCTCTCAACCTGGTCACAAGAATGTGGCGAATAACAACACAAGTGTAGCGGGAAATCCGTCTCCAGCATCCGAGATGCCAAACGTAAGAGAGAAATGGAGTGGAAAAAGTTTGGAGGGTTCAGCGGTCACTGAACCAGATCCATTGGACATGTCAGAGGAGGCTAAAGTGCAAAGATGGTTCCGTCGTGTTGCTCAGATCAAGGACATCTCTGAGCTAAGTCAGATTCCGGACGAAGATTTTCCATCGATCATGCCAATGCGCAAAGGTGTCAACAGGTTTGTAGTCAGCAAGAGGAAAACTCCATTGGAAAGAAGGTTAACATCACCTCAATACAGAAGAAATCTGCCCATTGTTAGTTCAGACCCACCAAAGCGAGAAAATGATGGCAGTTAG
Protein sequence
MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRHVHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAVQELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQGDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSNPDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDSKLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTNYTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSNEWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKKDKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSELHTRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREKWSGKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS
Homology
BLAST of CmoCh06G000600 vs. ExPASy Swiss-Prot
Match:
Q8S9K3 (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2)
HSP 1 Score: 566.2 bits (1458), Expect = 6.3e-160
Identity = 353/782 (45.14%), Postives = 452/782 (57.80%), Query Frame = 0
Query: 94 EWSNFLGSLDSGGYFGSPG--SGNEFVAVQELPAEFVNAANACLAFSRGREHLLGLLPRR 153
EW+ L SL GYF G SG E P E + A ACLA +R R LL +L RR
Sbjct: 94 EWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPALACLALARERPELLEMLSRR 153
Query: 154 DIEVLVESVNPCLFRDGDASLRKMKLFLQGDET---QVLDSDKARTIDLFKFILSYARNP 213
D+EVLVE+ P LF+ G SL++M L+L+ +++D +KA T+DL + ILSY +
Sbjct: 154 DVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGKLMDMEKASTVDLMRLILSYVVDV 213
Query: 214 TVSSESNLYSRDQVESSMRNLLSEICKLCFSNPDPKLLET-DNQFSDKYSQSRGPYGPKV 273
S ES ++++ +ESS+R+LLS+I K+ P+ + +T NQ+SD+ Q + V
Sbjct: 214 ASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNVHDTMQNQYSDRDGQGVRSFQNNV 273
Query: 274 EMKRGDWICPRCSFMNFARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGRNTVCLRCD 333
EMKRGDWIC RCS MNFARNVKC +C+EARPKRQL G EWECPQCDF+NYGRN CLRCD
Sbjct: 274 EMKRGDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQCDFYNYGRNVACLRCD 333
Query: 334 CKRPGPPSLSNININSGLGNDNGSHTIKVDIDSKLAANEEKAQRWFSKISQLDSTSDSGS 393
CKRP +S L + N ++ +++ +L NE+KAQRW SK++Q SD+ S
Sbjct: 334 CKRPR---------DSSLNSANSDYSSDPELERRLVENEKKAQRWLSKVAQ--GGSDANS 393
Query: 394 SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDGVPENNSSELSASNN 453
TDEDFPEIMPLRKGVNR+VVSTRK PLERRLAN + R + DG
Sbjct: 394 VDTDEDFPEIMPLRKGVNRYVVSTRKPPLERRLANTENR--VATDG-------------- 453
Query: 454 SLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTNYTLSSTSGSSQYESPKGGNSSYVPFVP 513
+ S D+ LG +T S + G+ + T+ + S ++ES +G N+ +VPFVP
Sbjct: 454 --NSKRSDDNALGSKTTRSLNEILGSSSSL-TSRSDDKNVSSRRFESSQGINTDFVPFVP 513
Query: 514 LPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSNEWTGSTSQSNGLNEVGDIPSPPQNPTQ 573
LP DMFAKKPK E+++ DN + S + N G T
Sbjct: 514 LPSDMFAKKPKE---ETQIGLIDNIQVDGFSGGNQNVYQEDKSDANHSG-------KETD 573
Query: 574 KINEGKEETEKSERWFKRVAELHNVTDLPSAISDEDFPEIMPMRKGENRFVVSKKKDRSL 633
++ + ++E+ RWFKRV ELHNV+DL SAI E PE MPMRKGENRFVVS+KKDRSL
Sbjct: 574 RLEKEDHKSEEPARWFKRVTELHNVSDLESAIPQEISPEKMPMRKGENRFVVSRKKDRSL 633
Query: 634 TSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKKDKALSDDSNSQVTETFSDDSNGQVTEA 693
TSPAYKR S+FVPFVPFPPDYFAK
Sbjct: 634 TSPAYKR------PEDSDFVPFVPFPPDYFAK---------------------------- 693
Query: 694 QSYDTSIGIDDRSNSQQSDNLETQAGRFNSELHTRNSSRSDEATAYGVPNIQSLDTNLVS 753
++ + D L A T N S+ +V
Sbjct: 694 ----------EKQPKESIDTLPAPA--------TENVSQ------------------VVQ 752
Query: 754 SQPGHKNVANNNTSVAGNPSPASEMPNVREKWSGKSLEGSAVTEPDPLDMSEEAKVQRWF 813
+P ++ ++T +R +GKSLEGS V E D LDMSEEAK +RWF
Sbjct: 754 QEPREPSINKSDTVAV----------KIR---NGKSLEGSLVKESDLLDMSEEAKAERWF 752
Query: 814 RRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSS 870
+RVA+IK+ISELS+IPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTS +++RN I +S
Sbjct: 814 KRVAEIKNISELSEIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQRHQRNPHITNS 752
BLAST of CmoCh06G000600 vs. ExPASy Swiss-Prot
Match:
Q9JLG8 (Calpain-15 OS=Mus musculus OX=10090 GN=Capn15 PE=1 SV=1)
HSP 1 Score: 47.4 bits (111), Expect = 9.9e-04
Identity = 27/80 (33.75%), Postives = 34/80 (42.50%), Query Frame = 0
Query: 272 GDWICPRCSFMNFARNVKCLECEEARPKRQL--------IGGEWECPQCDFFNYGRNTVC 331
G+W C RC+F+N A +C CE R K L +W C +C F N+ C
Sbjct: 5 GEWSCARCTFLNPAGQRQCSICEAPRHKPDLDQILRLSVEEQKWPCARCTFRNFLGKEAC 64
Query: 332 LRCDCKR---PGPPSLSNIN 341
C PG P L IN
Sbjct: 65 EVCGFTPEPVPGAPLLPIIN 84
BLAST of CmoCh06G000600 vs. ExPASy TrEMBL
Match:
A0A6J1FU33 (zinc finger protein VAR3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447301 PE=4 SV=1)
HSP 1 Score: 1741.1 bits (4508), Expect = 0.0e+00
Identity = 877/877 (100.00%), Postives = 877/877 (100.00%), Query Frame = 0
Query: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRH 60
MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRH
Sbjct: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRH 60
Query: 61 VHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAV 120
VHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAV
Sbjct: 61 VHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAV 120
Query: 121 QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ 180
QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ
Sbjct: 121 QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ 180
Query: 181 GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN 240
GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN
Sbjct: 181 GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN 240
Query: 241 PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR 300
PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR
Sbjct: 241 PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR 300
Query: 301 QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDS 360
QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDS
Sbjct: 301 QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDS 360
Query: 361 KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL
Sbjct: 361 KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
Query: 421 ANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTN 480
ANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTN
Sbjct: 421 ANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTN 480
Query: 481 YTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSN 540
YTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSN
Sbjct: 481 YTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSN 540
Query: 541 EWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSAIS 600
EWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSAIS
Sbjct: 541 EWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSAIS 600
Query: 601 DEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKK 660
DEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKK
Sbjct: 601 DEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKK 660
Query: 661 DKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSELH 720
DKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSELH
Sbjct: 661 DKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSELH 720
Query: 721 TRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREKWS 780
TRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREKWS
Sbjct: 721 TRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREKWS 780
Query: 781 GKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRF 840
GKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRF
Sbjct: 781 GKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRF 840
Query: 841 VVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 878
VVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS
Sbjct: 841 VVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 877
BLAST of CmoCh06G000600 vs. ExPASy TrEMBL
Match:
A0A6J1I6Q5 (zinc finger protein VAR3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470130 PE=4 SV=1)
HSP 1 Score: 1690.6 bits (4377), Expect = 0.0e+00
Identity = 854/877 (97.38%), Postives = 863/877 (98.40%), Query Frame = 0
Query: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRH 60
MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSL+PRNRFLSPSFPLIRASRH
Sbjct: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLQPRNRFLSPSFPLIRASRH 60
Query: 61 VHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAV 120
VHSQVSTPGDEFGNFEESGSV+GVFS DSYIWREWS FLGSLDSGGYFGS SGNEFVAV
Sbjct: 61 VHSQVSTPGDEFGNFEESGSVSGVFSQDSYIWREWSKFLGSLDSGGYFGSLDSGNEFVAV 120
Query: 121 QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ 180
QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ
Sbjct: 121 QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ 180
Query: 181 GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN 240
GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN
Sbjct: 181 GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN 240
Query: 241 PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR 300
PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR
Sbjct: 241 PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR 300
Query: 301 QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDS 360
QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGS TIKVDIDS
Sbjct: 301 QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSRTIKVDIDS 360
Query: 361 KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL
Sbjct: 361 KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
Query: 421 ANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTN 480
ANAQYRRNLGNDGVPENN SELSAS NSLDKTTSHDDILGRLS+NSQSTNFGNEQGIRTN
Sbjct: 421 ANAQYRRNLGNDGVPENNCSELSASTNSLDKTTSHDDILGRLSSNSQSTNFGNEQGIRTN 480
Query: 481 YTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSN 540
YTLSS+SGSSQYESPKGG+SSYVPFVPL PDMFAKKPKNSSME+EVVGTDNNKSLPS SN
Sbjct: 481 YTLSSSSGSSQYESPKGGHSSYVPFVPLSPDMFAKKPKNSSMETEVVGTDNNKSLPSGSN 540
Query: 541 EWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSAIS 600
EWTGSTSQSNGLNEVGDIPSPPQNP QKINEGKEETEKSERWFKRVAELHNVTDL SAIS
Sbjct: 541 EWTGSTSQSNGLNEVGDIPSPPQNPIQKINEGKEETEKSERWFKRVAELHNVTDLTSAIS 600
Query: 601 DEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKK 660
DEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKK
Sbjct: 601 DEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKK 660
Query: 661 DKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSELH 720
DKALSDDSNSQVTE FSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGR +SELH
Sbjct: 661 DKALSDDSNSQVTENFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRLDSELH 720
Query: 721 TRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREKWS 780
TRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNT+VAGN SPASEMPNVREKWS
Sbjct: 721 TRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTNVAGNQSPASEMPNVREKWS 780
Query: 781 GKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRF 840
GKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRF
Sbjct: 781 GKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRF 840
Query: 841 VVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 878
VVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDG+
Sbjct: 841 VVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGN 877
BLAST of CmoCh06G000600 vs. ExPASy TrEMBL
Match:
A0A6J1DJ45 (zinc finger protein VAR3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021553 PE=4 SV=1)
HSP 1 Score: 1334.7 bits (3453), Expect = 0.0e+00
Identity = 714/900 (79.33%), Postives = 757/900 (84.11%), Query Frame = 0
Query: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFR-----SSLKPRN----RFLSPS 60
MGGATRFFVLLS PLPLI HHRRPS LRLASHYHNFFR SSL N LSPS
Sbjct: 1 MGGATRFFVLLSGPLPLI-HHRRPSILRLASHYHNFFRSSFSFSSLHTTNVCIPPILSPS 60
Query: 61 FPLIRASRHVHSQVSTPGDEFGNFEESG-SVNGVFSPDSYIWREWSNFLGSLDSGGYFGS 120
FP I ASR +HSQVST GD+ G+ E SG S G FSP+S+ REWS FL SLD+GGYFG
Sbjct: 61 FPPITASRRLHSQVSTVGDDSGSLEGSGWSGYGAFSPNSHNSREWSKFLQSLDAGGYFGR 120
Query: 121 PGSGNEFVAVQELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDA 180
GS +E +AV+ELPAEFV+AA ACLAFSR RE LLGLLP RDIEVLVESV PCLFRDGDA
Sbjct: 121 QGSASELLAVEELPAEFVSAAIACLAFSREREQLLGLLPMRDIEVLVESVIPCLFRDGDA 180
Query: 181 SLRKMKLFLQGDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLL 240
S RKM+LFL+G ETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRD VESS+RNLL
Sbjct: 181 STRKMELFLRGSETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDLVESSVRNLL 240
Query: 241 SEICKLCFSNPDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKC 300
EICKLCFSNPDPKL+ET NQFSDKY QSRGPYGPK+EMKRGDWICPRCSFMNFARNVKC
Sbjct: 241 GEICKLCFSNPDPKLMETVNQFSDKYGQSRGPYGPKIEMKRGDWICPRCSFMNFARNVKC 300
Query: 301 LECEEARPKRQLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNG 360
LECEEARPKRQL G EWECPQCDFFNYGRNTVCLRCDCKRPG PSLSNININSGLGNDNG
Sbjct: 301 LECEEARPKRQLTGAEWECPQCDFFNYGRNTVCLRCDCKRPGAPSLSNININSGLGNDNG 360
Query: 361 SHTIKVDIDSKLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVS 420
S KVDIDSKLAANEEKAQRWFSKISQ DSTSDSGSSI DEDFPEIMPLRKGVNRFVVS
Sbjct: 361 SQATKVDIDSKLAANEEKAQRWFSKISQQDSTSDSGSSIADEDFPEIMPLRKGVNRFVVS 420
Query: 421 TRKTPLERRLANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSH--DDILGRLSTNSQS 480
TRKTPLERRLANAQYRRNLGNDGVPENNSS++ A+N SLDKT S DDILGR STN Q+
Sbjct: 421 TRKTPLERRLANAQYRRNLGNDGVPENNSSKVDAANRSLDKTISQNLDDILGRTSTNYQA 480
Query: 481 TNFGNEQGIRTNYTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVG 540
+N GNEQG T SS SGSSQYES K NSSYVPFVPLPPDMFAKKP
Sbjct: 481 SNVGNEQG-----TTSSVSGSSQYESLKVRNSSYVPFVPLPPDMFAKKP----------- 540
Query: 541 TDNNKSLPSSSNEWTGSTSQSNGLNEVGDIPS---PPQNPTQKINEGKEETEKSERWFKR 600
DNNKS+ S +NEWTGS S+SN LN+VG IP+ P N T+K+NEG+EETEKSERWFKR
Sbjct: 541 -DNNKSVLSDANEWTGSASKSNELNDVGVIPNTVEKPMNQTEKLNEGEEETEKSERWFKR 600
Query: 601 VAELHNVTDLPSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSN 660
VAELHNV+DL SAISDEDFPEIMPMRKG+NRFVVSKKKDRSLTSPAYKRRA+MEQAGSSN
Sbjct: 601 VAELHNVSDLTSAISDEDFPEIMPMRKGDNRFVVSKKKDRSLTSPAYKRRASMEQAGSSN 660
Query: 661 FVPFVPFPPDYFAKKDKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQS 720
FVPFVPFPPDYFAKKDK SD S S VT EAQS DT I DDR N++QS
Sbjct: 661 FVPFVPFPPDYFAKKDKPSSDGSTSNVT-----------GEAQSSDTRIEFDDRDNAEQS 720
Query: 721 DNLETQAGRFNSELHTRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNV--------AN 780
DNL+TQ G+ NSEL + NSS+++EA Y VPNIQS TN VSSQ +NV AN
Sbjct: 721 DNLQTQTGKLNSELLSGNSSQNNEAAEYRVPNIQSSGTNFVSSQSARENVSSSDHVEEAN 780
Query: 781 NNTSVAGNPSPASEMPNVREKWSGKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDIS 840
NNT+VAGNPSPASE+ N+REKWSGKSLEGSAVTEPDPLDMSEEAK QRWFRRVAQIKDIS
Sbjct: 781 NNTNVAGNPSPASEIQNIREKWSGKSLEGSAVTEPDPLDMSEEAKAQRWFRRVAQIKDIS 840
Query: 841 ELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 878
ELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS
Sbjct: 841 ELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 871
BLAST of CmoCh06G000600 vs. ExPASy TrEMBL
Match:
A0A5D3DPI0 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005940 PE=4 SV=1)
HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 690/879 (78.50%), Postives = 733/879 (83.39%), Query Frame = 0
Query: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRH 60
MGGATRFFVLLS PLPL+ H+RR SFLRLASHYH FFRSSL P R LS SF IRASRH
Sbjct: 1 MGGATRFFVLLSGPLPLV-HYRRSSFLRLASHYHKFFRSSLHPSARILSSSFHPIRASRH 60
Query: 61 VHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAV 120
VHSQVST GD+FG+FE+ GS N +FSPDSY WREWS FLG L SGGYFG SG E VA
Sbjct: 61 VHSQVSTIGDDFGSFEDPGSANSMFSPDSYTWREWSQFLGGLISGGYFGRRVSGIELVAD 120
Query: 121 QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ 180
ELPAEF+N ANACLAFS REHLLGLLPR+DIEVLVESVNPC FRDGD S RKMKLFL+
Sbjct: 121 LELPAEFLNTANACLAFSLEREHLLGLLPRKDIEVLVESVNPCFFRDGDDSSRKMKLFLR 180
Query: 181 GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN 240
GDETQV D DKA IDLFKFILSYARNP VSSESNLY RD VE S+RNLL EICKL FSN
Sbjct: 181 GDETQVSDHDKAHIIDLFKFILSYARNPVVSSESNLYGRDLVELSVRNLLREICKLGFSN 240
Query: 241 PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR 300
PDP L ET NQ DKY+Q RGPYGPK+EMKRGDWICPRCSFMNFARNVKCLEC+EARPKR
Sbjct: 241 PDPNLPETANQIPDKYAQPRGPYGPKIEMKRGDWICPRCSFMNFARNVKCLECDEARPKR 300
Query: 301 QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDS 360
QL GGEWECPQCDFFNYGRNT+CLRCDCKRPG PS+SNIN N GNDNGS KVDIDS
Sbjct: 301 QLNGGEWECPQCDFFNYGRNTLCLRCDCKRPGAPSVSNINENFASGNDNGSRATKVDIDS 360
Query: 361 KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
KLA NEEKAQRWFSKISQLDS SDSGSSI DEDFPEIMPLRKGVNRFVVSTRKTPLERRL
Sbjct: 361 KLADNEEKAQRWFSKISQLDSMSDSGSSIADEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
Query: 421 ANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSH--DDILGRLSTNSQSTNFGNEQGIR 480
ANAQY+ NLGN GVPENNSSELSASNN LD+ DD GR STNSQSTN G EQG
Sbjct: 421 ANAQYKGNLGNYGVPENNSSELSASNNPLDEKIGQRLDDTFGRTSTNSQSTNLGKEQGTS 480
Query: 481 TNYTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSS 540
TNYT SS+SGS QY S KG NS+YVPFVPLPPDMFAKKP NS+MES+VVGTDNNKSL S
Sbjct: 481 TNYTSSSSSGSLQYASLKGSNSNYVPFVPLPPDMFAKKPTNSTMESKVVGTDNNKSLSSG 540
Query: 541 SNEWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSA 600
SNEWTG+ SQSN + EVGD +PP+N T+KINEGKE+ EKSERWFKRVAELHNVTDLPSA
Sbjct: 541 SNEWTGNASQSNEMKEVGD--TPPRNETEKINEGKEDAEKSERWFKRVAELHNVTDLPSA 600
Query: 601 ISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFA 660
ISDEDFPEIMP+RKGENRFVVSKKKDRSLTSPAYKR AAMEQ+GSSNFVPFVPFPPDYFA
Sbjct: 601 ISDEDFPEIMPIRKGENRFVVSKKKDRSLTSPAYKRHAAMEQSGSSNFVPFVPFPPDYFA 660
Query: 661 KKDKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSE 720
KKDK SD SNS + TEAQS +T IG+DD +N+QQSDN ETQ RFNSE
Sbjct: 661 KKDKHSSDYSNS------------KATEAQSNNTRIGVDDGNNAQQSDNKETQTSRFNSE 720
Query: 721 LHTRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREK 780
L T +SS + EA SS K +N+NT+ AGNPS +E+ N+REK
Sbjct: 721 LRTGSSSWNSEA----------------SSSDYVKKESNHNTNAAGNPS--AEVQNIREK 780
Query: 781 WSGKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVN 840
WSGKSLEGSAVTEPDPLDMSEEAK QRWFRRVAQIKDISELSQIPDEDFPSIMPMR+GVN
Sbjct: 781 WSGKSLEGSAVTEPDPLDMSEEAKAQRWFRRVAQIKDISELSQIPDEDFPSIMPMRQGVN 840
Query: 841 RFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 878
RFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKREND S
Sbjct: 841 RFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDDS 846
BLAST of CmoCh06G000600 vs. ExPASy TrEMBL
Match:
A0A1S3B849 (zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486824 PE=4 SV=1)
HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 690/879 (78.50%), Postives = 733/879 (83.39%), Query Frame = 0
Query: 1 MGGATRFFVLLSTPLPLIHHHRRPSFLRLASHYHNFFRSSLKPRNRFLSPSFPLIRASRH 60
MGGATRFFVLLS PLPL+ H+RR SFLRLASHYH FFRSSL P R LS SF IRASRH
Sbjct: 1 MGGATRFFVLLSGPLPLV-HYRRSSFLRLASHYHKFFRSSLHPSARILSSSFHPIRASRH 60
Query: 61 VHSQVSTPGDEFGNFEESGSVNGVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAV 120
VHSQVST GD+FG+FE+ GS N +FSPDSY WREWS FLG L SGGYFG SG E VA
Sbjct: 61 VHSQVSTIGDDFGSFEDPGSANSMFSPDSYTWREWSQFLGGLISGGYFGRRVSGIELVAD 120
Query: 121 QELPAEFVNAANACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQ 180
ELPAEF+N ANACLAFS REHLLGLLPR+DIEVLVESVNPC FRDGD S RKMKLFL+
Sbjct: 121 LELPAEFLNTANACLAFSLEREHLLGLLPRKDIEVLVESVNPCFFRDGDDSSRKMKLFLR 180
Query: 181 GDETQVLDSDKARTIDLFKFILSYARNPTVSSESNLYSRDQVESSMRNLLSEICKLCFSN 240
GDETQV D DKA IDLFKFILSYARNP VSSESNLY RD VE S+RNLL EICKL FSN
Sbjct: 181 GDETQVSDHDKAHIIDLFKFILSYARNPVVSSESNLYGRDLVELSVRNLLREICKLGFSN 240
Query: 241 PDPKLLETDNQFSDKYSQSRGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKR 300
PDP L ET NQ DKY+Q RGPYGPK+EMKRGDWICPRCSFMNFARNVKCLEC+EARPKR
Sbjct: 241 PDPNLPETANQIPDKYAQPRGPYGPKIEMKRGDWICPRCSFMNFARNVKCLECDEARPKR 300
Query: 301 QLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSNININSGLGNDNGSHTIKVDIDS 360
QL GGEWECPQCDFFNYGRNT+CLRCDCKRPG PS+SNIN N GNDNGS KVDIDS
Sbjct: 301 QLNGGEWECPQCDFFNYGRNTLCLRCDCKRPGAPSVSNINENFASGNDNGSRATKVDIDS 360
Query: 361 KLAANEEKAQRWFSKISQLDSTSDSGSSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
KLA NEEKAQRWFSKISQLDS SDSGSSI DEDFPEIMPLRKGVNRFVVSTRKTPLERRL
Sbjct: 361 KLADNEEKAQRWFSKISQLDSMSDSGSSIADEDFPEIMPLRKGVNRFVVSTRKTPLERRL 420
Query: 421 ANAQYRRNLGNDGVPENNSSELSASNNSLDKTTSH--DDILGRLSTNSQSTNFGNEQGIR 480
ANAQY+ NLGN GVPENNSSELSASNN LD+ DD GR STNSQSTN G EQG
Sbjct: 421 ANAQYKGNLGNYGVPENNSSELSASNNPLDEKIGQRLDDTFGRTSTNSQSTNLGKEQGTS 480
Query: 481 TNYTLSSTSGSSQYESPKGGNSSYVPFVPLPPDMFAKKPKNSSMESEVVGTDNNKSLPSS 540
TNYT SS+SGS QY S KG NS+YVPFVPLPPDMFAKKP NS+MES+VVGTDNNKSL S
Sbjct: 481 TNYTSSSSSGSLQYASLKGSNSNYVPFVPLPPDMFAKKPTNSTMESKVVGTDNNKSLSSG 540
Query: 541 SNEWTGSTSQSNGLNEVGDIPSPPQNPTQKINEGKEETEKSERWFKRVAELHNVTDLPSA 600
SNEWTG+ SQSN + EVGD +PP+N T+KINEGKE+ EKSERWFKRVAELHNVTDLPSA
Sbjct: 541 SNEWTGNASQSNEMKEVGD--TPPRNETEKINEGKEDAEKSERWFKRVAELHNVTDLPSA 600
Query: 601 ISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRAAMEQAGSSNFVPFVPFPPDYFA 660
ISDEDFPEIMP+RKGENRFVVSKKKDRSLTSPAYKR AAMEQ+GSSNFVPFVPFPPDYFA
Sbjct: 601 ISDEDFPEIMPIRKGENRFVVSKKKDRSLTSPAYKRHAAMEQSGSSNFVPFVPFPPDYFA 660
Query: 661 KKDKALSDDSNSQVTETFSDDSNGQVTEAQSYDTSIGIDDRSNSQQSDNLETQAGRFNSE 720
KKDK SD SNS + TEAQS +T IG+DD +N+QQSDN ETQ RFNSE
Sbjct: 661 KKDKHSSDYSNS------------KATEAQSNNTRIGVDDGNNAQQSDNKETQTSRFNSE 720
Query: 721 LHTRNSSRSDEATAYGVPNIQSLDTNLVSSQPGHKNVANNNTSVAGNPSPASEMPNVREK 780
L T +SS + EA SS K +N+NT+ AGNPS +E+ N+REK
Sbjct: 721 LRTGSSSWNSEA----------------SSSDYVKKESNHNTNAAGNPS--AEVQNIREK 780
Query: 781 WSGKSLEGSAVTEPDPLDMSEEAKVQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVN 840
WSGKSLEGSAVTEPDPLDMSEEAK QRWFRRVAQIKDISELSQIPDEDFPSIMPMR+GVN
Sbjct: 781 WSGKSLEGSAVTEPDPLDMSEEAKAQRWFRRVAQIKDISELSQIPDEDFPSIMPMRQGVN 840
Query: 841 RFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDGS 878
RFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKREND S
Sbjct: 841 RFVVSKRKTPLERRLTSPQYRRNLPIVSSDPPKRENDDS 846
BLAST of CmoCh06G000600 vs. TAIR 10
Match:
AT5G17790.1 (zinc finger (Ran-binding) family protein )
HSP 1 Score: 566.2 bits (1458), Expect = 4.5e-161
Identity = 353/782 (45.14%), Postives = 452/782 (57.80%), Query Frame = 0
Query: 94 EWSNFLGSLDSGGYFGSPG--SGNEFVAVQELPAEFVNAANACLAFSRGREHLLGLLPRR 153
EW+ L SL GYF G SG E P E + A ACLA +R R LL +L RR
Sbjct: 94 EWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPALACLALARERPELLEMLSRR 153
Query: 154 DIEVLVESVNPCLFRDGDASLRKMKLFLQGDET---QVLDSDKARTIDLFKFILSYARNP 213
D+EVLVE+ P LF+ G SL++M L+L+ +++D +KA T+DL + ILSY +
Sbjct: 154 DVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGKLMDMEKASTVDLMRLILSYVVDV 213
Query: 214 TVSSESNLYSRDQVESSMRNLLSEICKLCFSNPDPKLLET-DNQFSDKYSQSRGPYGPKV 273
S ES ++++ +ESS+R+LLS+I K+ P+ + +T NQ+SD+ Q + V
Sbjct: 214 ASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNVHDTMQNQYSDRDGQGVRSFQNNV 273
Query: 274 EMKRGDWICPRCSFMNFARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGRNTVCLRCD 333
EMKRGDWIC RCS MNFARNVKC +C+EARPKRQL G EWECPQCDF+NYGRN CLRCD
Sbjct: 274 EMKRGDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQCDFYNYGRNVACLRCD 333
Query: 334 CKRPGPPSLSNININSGLGNDNGSHTIKVDIDSKLAANEEKAQRWFSKISQLDSTSDSGS 393
CKRP +S L + N ++ +++ +L NE+KAQRW SK++Q SD+ S
Sbjct: 334 CKRPR---------DSSLNSANSDYSSDPELERRLVENEKKAQRWLSKVAQ--GGSDANS 393
Query: 394 SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDGVPENNSSELSASNN 453
TDEDFPEIMPLRKGVNR+VVSTRK PLERRLAN + R + DG
Sbjct: 394 VDTDEDFPEIMPLRKGVNRYVVSTRKPPLERRLANTENR--VATDG-------------- 453
Query: 454 SLDKTTSHDDILGRLSTNSQSTNFGNEQGIRTNYTLSSTSGSSQYESPKGGNSSYVPFVP 513
+ S D+ LG +T S + G+ + T+ + S ++ES +G N+ +VPFVP
Sbjct: 454 --NSKRSDDNALGSKTTRSLNEILGSSSSL-TSRSDDKNVSSRRFESSQGINTDFVPFVP 513
Query: 514 LPPDMFAKKPKNSSMESEVVGTDNNKSLPSSSNEWTGSTSQSNGLNEVGDIPSPPQNPTQ 573
LP DMFAKKPK E+++ DN + S + N G T
Sbjct: 514 LPSDMFAKKPKE---ETQIGLIDNIQVDGFSGGNQNVYQEDKSDANHSG-------KETD 573
Query: 574 KINEGKEETEKSERWFKRVAELHNVTDLPSAISDEDFPEIMPMRKGENRFVVSKKKDRSL 633
++ + ++E+ RWFKRV ELHNV+DL SAI E PE MPMRKGENRFVVS+KKDRSL
Sbjct: 574 RLEKEDHKSEEPARWFKRVTELHNVSDLESAIPQEISPEKMPMRKGENRFVVSRKKDRSL 633
Query: 634 TSPAYKRRAAMEQAGSSNFVPFVPFPPDYFAKKDKALSDDSNSQVTETFSDDSNGQVTEA 693
TSPAYKR S+FVPFVPFPPDYFAK
Sbjct: 634 TSPAYKR------PEDSDFVPFVPFPPDYFAK---------------------------- 693
Query: 694 QSYDTSIGIDDRSNSQQSDNLETQAGRFNSELHTRNSSRSDEATAYGVPNIQSLDTNLVS 753
++ + D L A T N S+ +V
Sbjct: 694 ----------EKQPKESIDTLPAPA--------TENVSQ------------------VVQ 752
Query: 754 SQPGHKNVANNNTSVAGNPSPASEMPNVREKWSGKSLEGSAVTEPDPLDMSEEAKVQRWF 813
+P ++ ++T +R +GKSLEGS V E D LDMSEEAK +RWF
Sbjct: 754 QEPREPSINKSDTVAV----------KIR---NGKSLEGSLVKESDLLDMSEEAKAERWF 752
Query: 814 RRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSS 870
+RVA+IK+ISELS+IPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTS +++RN I +S
Sbjct: 814 KRVAEIKNISELSEIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQRHQRNPHITNS 752
BLAST of CmoCh06G000600 vs. TAIR 10
Match:
AT1G55040.1 (zinc finger (Ran-binding) family protein )
HSP 1 Score: 162.9 bits (411), Expect = 1.1e-39
Identity = 106/294 (36.05%), Postives = 138/294 (46.94%), Query Frame = 0
Query: 92 WREWSNFLGSLDSGGYF-------------------GSPGSGNEFVAVQELPAEFVNAAN 151
W EW + L YF S G G + L +F N
Sbjct: 149 WPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGEDENVGVALFQDFRAVQN 208
Query: 152 ACLAFSRGREHLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQGDETQVLDS--- 211
AC F + R +L L R DI++LV P R S + ++ + DE V S
Sbjct: 209 ACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSSCSL 268
Query: 212 --------------DKARTIDLFKFILSYARNP---TVSSESNLYSRDQVESSMRNLLSE 271
D+ARTIDL + + +Y +P TV+++S L + V+S +R LL E
Sbjct: 269 RNSCEKAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKS-LLKKKSVKSVVRKLLHE 328
Query: 272 ICKLCFSNPDPKLL-ETDNQFSDKYSQSRGPYGPK-------VEMKRGDWICPRCSFMNF 331
I KL DP L + K Q P PK VEMK+GDW+CP+C FMNF
Sbjct: 329 IVKLSAVPIDPNLTPPVIKRAPPKVKQP--PPTPKRRVGRDDVEMKKGDWLCPKCDFMNF 388
Query: 332 ARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGRNTVCLRCDCKRPGPPSLSN 339
A+N CL+C+ RPKRQL+ GEWECP+C+F NY RN C CDCKRP L N
Sbjct: 389 AKNTICLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCDCKRPADAILEN 439
BLAST of CmoCh06G000600 vs. TAIR 10
Match:
AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )
HSP 1 Score: 127.1 bits (318), Expect = 7.0e-29
Identity = 85/311 (27.33%), Postives = 134/311 (43.09%), Query Frame = 0
Query: 83 GVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAVQELPAEFVNAANACLAFSRGRE 142
G+ P S+ W EW + +G L GYF E + E + ACL F+R R
Sbjct: 37 GLVDPSSHPWPEWLDLMGMLAKKGYF------EESLIPLMSSKESNHIRTACLNFARHRF 96
Query: 143 HLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQGDE-----------------TQ 202
L+ L ++DI+V+ P R S ++++ ++ DE Q
Sbjct: 97 TLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQ 156
Query: 203 VLDSDKARTIDLFKFILSY---ARNPTVSSESNLYSRDQVESSMRNLLSEI--------- 262
D + ARTID+ + +L+Y + +PTV E+ VE S+R LL E
Sbjct: 157 ARDDEGARTIDVMRLLLTYGLDSISPTV--ENRACQTKLVEDSVRKLLRESVAYSLTDFE 216
Query: 263 ----------------------------------CKLCFSNPDPKLLETDNQFSDKYSQS 322
CK + + L D ++ Q
Sbjct: 217 SAETETAGDELQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQL 276
Query: 323 RGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGR 331
+ + +K+GDWIC C+F+NF++N +CL C++ RQ+ GEWEC C++ N+ R
Sbjct: 277 KEEQKDHLPLKKGDWICQTCNFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRR 336
BLAST of CmoCh06G000600 vs. TAIR 10
Match:
AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )
HSP 1 Score: 127.1 bits (318), Expect = 7.0e-29
Identity = 85/311 (27.33%), Postives = 134/311 (43.09%), Query Frame = 0
Query: 83 GVFSPDSYIWREWSNFLGSLDSGGYFGSPGSGNEFVAVQELPAEFVNAANACLAFSRGRE 142
G+ P S+ W EW + +G L GYF E + E + ACL F+R R
Sbjct: 37 GLVDPSSHPWPEWLDLMGMLAKKGYF------EESLIPLMSSKESNHIRTACLNFARHRF 96
Query: 143 HLLGLLPRRDIEVLVESVNPCLFRDGDASLRKMKLFLQGDE-----------------TQ 202
L+ L ++DI+V+ P R S ++++ ++ DE Q
Sbjct: 97 TLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQ 156
Query: 203 VLDSDKARTIDLFKFILSY---ARNPTVSSESNLYSRDQVESSMRNLLSEI--------- 262
D + ARTID+ + +L+Y + +PTV E+ VE S+R LL E
Sbjct: 157 ARDDEGARTIDVMRLLLTYGLDSISPTV--ENRACQTKLVEDSVRKLLRESVAYSLTDFE 216
Query: 263 ----------------------------------CKLCFSNPDPKLLETDNQFSDKYSQS 322
CK + + L D ++ Q
Sbjct: 217 SAETETAGDELQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQL 276
Query: 323 RGPYGPKVEMKRGDWICPRCSFMNFARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGR 331
+ + +K+GDWIC C+F+NF++N +CL C++ RQ+ GEWEC C++ N+ R
Sbjct: 277 KEEQKDHLPLKKGDWICQTCNFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRR 336
BLAST of CmoCh06G000600 vs. TAIR 10
Match:
AT1G48570.1 (zinc finger (Ran-binding) family protein )
HSP 1 Score: 98.2 bits (243), Expect = 3.5e-20
Identity = 43/89 (48.31%), Postives = 50/89 (56.18%), Query Frame = 0
Query: 267 VEMKRGDWICPRCSFMNFARNVKCLECEEARPKRQLIGGEWECPQCDFFNYGRNTVCLRC 326
VEMK+GDW C C +MNFA N +C EC E R K G+WECP CDF N+ RN C +C
Sbjct: 373 VEMKKGDWNCTGCGYMNFASNKQCRECREQRHKTLAEPGDWECPSCDFVNFRRNDACKKC 432
Query: 327 DCKRPGPPSLSNININSGLGNDNGSHTIK 356
+CKRP S ND HT K
Sbjct: 433 ECKRP-----------SQANNDQEDHTWK 450
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8S9K3 | 6.3e-160 | 45.14 | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 ... | [more] |
Q9JLG8 | 9.9e-04 | 33.75 | Calpain-15 OS=Mus musculus OX=10090 GN=Capn15 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FU33 | 0.0e+00 | 100.00 | zinc finger protein VAR3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1I6Q5 | 0.0e+00 | 97.38 | zinc finger protein VAR3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470... | [more] |
A0A6J1DJ45 | 0.0e+00 | 79.33 | zinc finger protein VAR3, chloroplastic isoform X1 OS=Momordica charantia OX=367... | [more] |
A0A5D3DPI0 | 0.0e+00 | 78.50 | Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A1S3B849 | 0.0e+00 | 78.50 | zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486824 ... | [more] |