CmoCh06G000340 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh06G000340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionE3 ubiquitin-protein ligase
LocationCmo_Chr06: 230143 .. 233923 (+)
RNA-Seq ExpressionCmoCh06G000340
SyntenyCmoCh06G000340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCACCGCCACCAGAAAGCAAAAGCCATCGCTGTAGCTCACCAGTTGCCACCCGCCTCAGCTCCCACATTCTCTTTCTCTCTCTACACGACTACTTCACCAGCACCCATTCTCTCTCTCTCTCTCTCTCCCGAATTCTCTCTCAACTGGAGGCGGAGGTCATAATGGAAGAAGAGCGAGCACTCAGACGCAGCGCCAATGGCGGTTCTTCTGTTCTTCGCTACCCCACTGTCAGCACCACTTTTACAATCCCTTTAACTCGCTACACTACCCGTTTGATTACCTCCGACCGCCACCGCGTCCTTTTGGCTGATTGCGCCGACCCTCGACCGGACGCTGAAGAAGATGATGATGACGAAGACGGCTCCAGCGGATTCAATCACCGCTCCTTCTCCTACTCTATGCCCATTTTGGTTCTCGACGTTCTCTGGAATTTGGCCTTTGTTCTTGTCTCGATTGTTGTCCTCTTGTCCACGTTTCGTGAGCGCCCTTCCACCCCTTTGCGCCTTTGGATTTCTGGGTATGCCTTCCAATGTCTTCTGCACATTGGGTTTGTCTTCTTTGAGTACCAGAAGAGTATCCTGCACCATGGCTTTGAGGACCCTGCGGCTCATCGCAGGTAGGGAAAACAGTCTATTATGATTTCATTTCAGTGTTAGGGGAGGTTTTGTGCTATTTGTTGGCTGTGGCTGCTTACATTGTTCACCTTTTTCTAATCCCCTGAATTTTGAGCTTTAAATTTGAAGATGGGAGCCACTAATTTTGCTTGTATGGTTTTTAATGGAAACAAACCCCTTTTTGTTTAATGGAAGAAACAGTGAACTGATGTGATGAGGGGATGGATAATTGAGCATGCATGTTCTAAGAAATAGAGTAAAAGGGGAAAATGTAAATTCTTTATTCGGTGTTTATTTTCTTGATTTCATGTTTCATTCAACCTGTAATTAACTTCGTATCATCTTCTCAAATCTAGTCTTCAACTTACTTGATGAACACATAAAAATATACAGATCTATAAGCTGTACCAGCAAGCTTTGGACTAATTTGTTTCATCTTTGTCCTTCTAGCATAATGAAAAGGTTGGAGTCAATGAATACAATGACATCGTCGGTCTGGTGGGTCTTCGGATTCTATTGGATTGTCATGGGTGGCCACGCACTTCTCCAAGATTCTCCCCGGCTTTATTGGTAAGGACTTTGCCTTTTGACATGTTTTCTGATGGAGAAATGGTGTCACTGGCAAATTTCATCTTCTTTGAAAGTTGTTTCAACTGCTATCTTTTGGTTGGTTTTGCCTTTGAATTAACTGAATGTGTTCACACTGTTCAATCTGGACTTTACTTTTTTCTTTTTAGCAAACTTTCAACAATGTCCTACGGAAACTGGTAGTTTAAGTCATGGCTTTTCTAAATTAGGTTTCTAATTGCATATCAAACTAAGCTGATGACAGTTCGATCTCAAACAATTATACAAATGGCTATGCAAAAATTAAGGTATATCTTTAATATTCTGGTTCCAATCTCGATCATTCGGTTTTTTGTGGGTCAGTGGGTGGGTTCTAGATCATTTTATAAGAGATATCTTACAAGACCGGTGTCACTTCGAAGAACGTTCTTGTTTTGCTACAAAAAGAACAGTGAAAAGGTACCAATGGGGTCCCTTTAGAAGTTGATAATGTTTCCAATACAATAATTGAACCTAAATCCTGTAAGGTTAATGTTGAGTTAGTTGATACAAGAAAATTGTGTATATATATATATATATATATATATATATATAAACCCTAAATGACATCAATACGAATGTTCCGTAACTAATAACCAGTGGATAGCGAGAACAAGGAAAACTAAGTAAATGCATTAAATTTTGTTACATCTGCTTTCTTGATCCAATCTGATACTTTGTCAACAAATGTATTTGAATTTCTTTCATATTTTGACATTTTTAGCTTTAATTGTGTTCACCTAAAGAAATCTTAGCTTGGATTTATTGTTGTTCGGATCATTTAGCCTCATTTGGAGCTTTGATGCTGAATATTTCTTGGGTCAATTGCAGGTTAACCGTGGTCTTTCTAGCATTTGACTTGTTCTTTATTCTCTTTTGTGTTGGTATGGCATTTGTTGTTTGCTTCTCTCTTTGTTGCTGCATTCCAATTGTAGCATTTGCATATGCCATGACTACCAGAGAAGGCGCCTCAGATGAGGATATCAGGACTCTTCCCAAGTATACATTTCGTCAAGCTCCGGTATTTGGGACATTTAACAAAGAACAAAAACCTGTCAGAGCAAGATTGGAGTTGGATAATGATCACCACATCAAAGAACTTGTTCTTCATCCAGAGGATTCCGTCAGCTACTTATCTTTTATTTTATTTCAAATCATTAATATTCATATTCTATCTGGTGGATTGTTTATGATTCTATTGCATCATTATTATCTCCTGCGAAAAGTCCCGGACATTGCACGATTCAGATCTGCATGTGCATTACATATTATGTGCATGCAGTAGTTGATGATCATTCTAAAATTTGTGCGTATTTTGATTCTGTTCTCAGCTAGAATGAAGAGTATGTATTCCTTCTTGAACCATGAAAGATCCATGGAACTTAAAAAAAGGCCAATCTGGGTTCAATAATTGGGAATCTTGGTTATAATAACTCAATTTCTTGACTGCCTGCATAGACTAGCCGATATTGTTCTCTTTGAGCTTTTCCTTTGGGTGTCCCCCCTCAAGGTCTTTAAACCACGTCTGCTAGAGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCTCCAACTGATATGGGATCTGGCAATCCACCTCCTTTAGGGCCCAACATCCTCGAACCCTTATAAAAAATACTTCGTTCTCCTCTCGAACCAACGTGGGATGTCAAACTTTTCTTGCTTACAGTGATGAGTAAAAATGTATATCAGTATGGTTCTCTGTGTGCGCAATAGTTAGTGATTCTATGACAGGATGTACTTTCCTCATGGGGTGCAAATTTTTGTTTCGTTTCTCTCACTGGAATGTTCATCCTATCATTGCTTTTGAATCATGGTAGTCTTTTTCTTGTTGCATTTATGCTGTGTTTAGTTGAGAGTTTTCCCTAATTTGAAGCTGAGTATTCAAATATTTACTTTTGTGTAGGAATGTTGCATTTGCCTTTCACAATATGAAGACGGGACGGAGCTCTATACTCTTCCCTGCAACCACCATTTCCATTGTGGGTGCATTGGCAAATGGCTTCGGATAAAGGCAACCTGCCCGCTCTGCAAGTCTAATATCCATTGGGGCGATACATTGGTTTAACCATCGGAACGAGCAACAAATCCAGCTGAGAATTTGAAAGTTAGGATTTTCAATTTCAGGTCGATGCTTGTTGATCTCTGTCAACTAATGCTTTTAGGAACAGGGAGGGTGGAGAGTAGGAATTTAGCTGATTCCAACCTTAGGGAGATGTTTAGTTTCCTTAAACCCCATCTGTGGACACAATTTGATCTGAAACTTTTTACTTTATTTGTATGTAAATTGATAGGAAAAGGTCCTTGTGCCTCTAATTTAATCTGCTATATGTGAATATTTGCTTCTTCTGTGTCAGTTTACTGGCTACTCTGTTTTCAAGCCCTTCGTCATAATTGAAGAGGGATAGGAAAGAGGGAAAACATAGCAGTGTGGAGAAAAGTAACTGTTTAAACCCAATGGACTTCCATAATAGAAAGGGATTTGTTTCAGAAATGCTATTGTTTTAAATGTTACCAACCTTTGCCCTTCC

mRNA sequence

GTCACCGCCACCAGAAAGCAAAAGCCATCGCTGTAGCTCACCAGTTGCCACCCGCCTCAGCTCCCACATTCTCTTTCTCTCTCTACACGACTACTTCACCAGCACCCATTCTCTCTCTCTCTCTCTCTCCCGAATTCTCTCTCAACTGGAGGCGGAGGTCATAATGGAAGAAGAGCGAGCACTCAGACGCAGCGCCAATGGCGGTTCTTCTGTTCTTCGCTACCCCACTGTCAGCACCACTTTTACAATCCCTTTAACTCGCTACACTACCCGTTTGATTACCTCCGACCGCCACCGCGTCCTTTTGGCTGATTGCGCCGACCCTCGACCGGACGCTGAAGAAGATGATGATGACGAAGACGGCTCCAGCGGATTCAATCACCGCTCCTTCTCCTACTCTATGCCCATTTTGGTTCTCGACGTTCTCTGGAATTTGGCCTTTGTTCTTGTCTCGATTGTTGTCCTCTTGTCCACGTTTCGTGAGCGCCCTTCCACCCCTTTGCGCCTTTGGATTTCTGGGTATGCCTTCCAATGTCTTCTGCACATTGGGTTTGTCTTCTTTGAGTACCAGAAGAGTATCCTGCACCATGGCTTTGAGGACCCTGCGGCTCATCGCAGCATAATGAAAAGGTTGGAGTCAATGAATACAATGACATCGTCGGTCTGGTGGGTCTTCGGATTCTATTGGATTGTCATGGGTGGCCACGCACTTCTCCAAGATTCTCCCCGGCTTTATTGGTTAACCGTGGTCTTTCTAGCATTTGACTTGTTCTTTATTCTCTTTTGTGTTGGTATGGCATTTGTTGTTTGCTTCTCTCTTTGTTGCTGCATTCCAATTGTAGCATTTGCATATGCCATGACTACCAGAGAAGGCGCCTCAGATGAGGATATCAGGACTCTTCCCAAGTATACATTTCGTCAAGCTCCGGTATTTGGGACATTTAACAAAGAACAAAAACCTGTCAGAGCAAGATTGGAGTTGGATAATGATCACCACATCAAAGAACTTGTTCTTCATCCAGAGGATTCCGAATGTTGCATTTGCCTTTCACAATATGAAGACGGGACGGAGCTCTATACTCTTCCCTGCAACCACCATTTCCATTGTGGGTGCATTGGCAAATGGCTTCGGATAAAGGCAACCTGCCCGCTCTGCAAGTCTAATATCCATTGGGGCGATACATTGGTTTAACCATCGGAACGAGCAACAAATCCAGCTGAGAATTTGAAAGTTAGGATTTTCAATTTCAGGTCGATGCTTGTTGATCTCTGTCAACTAATGCTTTTAGGAACAGGGAGGGTGGAGAGTAGGAATTTAGCTGATTCCAACCTTAGGGAGATGTTTAGTTTCCTTAAACCCCATCTGTGGACACAATTTGATCTGAAACTTTTTACTTTATTTGTATGTAAATTGATAGGAAAAGGTCCTTGTGCCTCTAATTTAATCTGCTATATGTGAATATTTGCTTCTTCTGTGTCAGTTTACTGGCTACTCTGTTTTCAAGCCCTTCGTCATAATTGAAGAGGGATAGGAAAGAGGGAAAACATAGCAGTGTGGAGAAAAGTAACTGTTTAAACCCAATGGACTTCCATAATAGAAAGGGATTTGTTTCAGAAATGCTATTGTTTTAAATGTTACCAACCTTTGCCCTTCC

Coding sequence (CDS)

ATGGAAGAAGAGCGAGCACTCAGACGCAGCGCCAATGGCGGTTCTTCTGTTCTTCGCTACCCCACTGTCAGCACCACTTTTACAATCCCTTTAACTCGCTACACTACCCGTTTGATTACCTCCGACCGCCACCGCGTCCTTTTGGCTGATTGCGCCGACCCTCGACCGGACGCTGAAGAAGATGATGATGACGAAGACGGCTCCAGCGGATTCAATCACCGCTCCTTCTCCTACTCTATGCCCATTTTGGTTCTCGACGTTCTCTGGAATTTGGCCTTTGTTCTTGTCTCGATTGTTGTCCTCTTGTCCACGTTTCGTGAGCGCCCTTCCACCCCTTTGCGCCTTTGGATTTCTGGGTATGCCTTCCAATGTCTTCTGCACATTGGGTTTGTCTTCTTTGAGTACCAGAAGAGTATCCTGCACCATGGCTTTGAGGACCCTGCGGCTCATCGCAGCATAATGAAAAGGTTGGAGTCAATGAATACAATGACATCGTCGGTCTGGTGGGTCTTCGGATTCTATTGGATTGTCATGGGTGGCCACGCACTTCTCCAAGATTCTCCCCGGCTTTATTGGTTAACCGTGGTCTTTCTAGCATTTGACTTGTTCTTTATTCTCTTTTGTGTTGGTATGGCATTTGTTGTTTGCTTCTCTCTTTGTTGCTGCATTCCAATTGTAGCATTTGCATATGCCATGACTACCAGAGAAGGCGCCTCAGATGAGGATATCAGGACTCTTCCCAAGTATACATTTCGTCAAGCTCCGGTATTTGGGACATTTAACAAAGAACAAAAACCTGTCAGAGCAAGATTGGAGTTGGATAATGATCACCACATCAAAGAACTTGTTCTTCATCCAGAGGATTCCGAATGTTGCATTTGCCTTTCACAATATGAAGACGGGACGGAGCTCTATACTCTTCCCTGCAACCACCATTTCCATTGTGGGTGCATTGGCAAATGGCTTCGGATAAAGGCAACCTGCCCGCTCTGCAAGTCTAATATCCATTGGGGCGATACATTGGTTTAA

Protein sequence

MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEEDDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV
Homology
BLAST of CmoCh06G000340 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-67
Identity = 131/286 (45.80%), Postives = 173/286 (60.49%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           ++YS P++ LD+LWNLAFV + + VL+ +  E+P+ PLR+W+ GY  QC LH+  V  EY
Sbjct: 103 WAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY 162

Query: 136 ----------------------QKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGF 195
                                 Q+ +     ED     +  K LES NTM S +WW+ GF
Sbjct: 163 RRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGF 222

Query: 196 YWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIP-IVAFAYAM 255
           YW+  GG  L  DSP+LYWL ++FL FD+FF++FCV +A V+  ++CCC+P I+A  YA+
Sbjct: 223 YWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAV 282

Query: 256 TTREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPVRAR---LELDNDHHIKELVLHPEDS 315
             +EGAS  DI  +PK+ F +     T N E+   +AR    E   D  I E  L PED+
Sbjct: 283 ADQEGASKNDIDQMPKFRFTK-----TGNVEKLSGKARGIMTECGTDSPI-ERSLSPEDA 342

Query: 316 ECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNI 336
           ECCICL +YEDG EL  LPCNHHFHC CI KWL I + CPLCK NI
Sbjct: 343 ECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382

BLAST of CmoCh06G000340 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.7e-66
Identity = 134/308 (43.51%), Postives = 178/308 (57.79%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           ++YS P++VLD++WNLAFV V+  +L+ + +E P  PLR+W+ GYA QC+LH+  V  EY
Sbjct: 94  WAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEY 153

Query: 136 QK-----------------------------------SILHHGFED------PAAHRSIM 195
           ++                                   S  + G +D           S+ 
Sbjct: 154 RRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVA 213

Query: 196 KRLESMNTMTSSVWWVFGFYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFV 255
           K LES NTM S +WW+ GFYW+  GG  L Q+SPR+YWL++VFL FD+FF++FCV +A V
Sbjct: 214 KHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACV 273

Query: 256 VCFSLCCCIP-IVAFAYAMTTREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPVR----- 315
           +  ++CCC+P I+A  YA+  +EGAS EDI  L K+ FR+    G  NK           
Sbjct: 274 IGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRK---LGDANKHTNDEAQGTTE 333

Query: 316 -ARLELDNDHHIKELVLHPEDSECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKAT 336
               E   D  I+  +L  ED+ECCICLS YEDGTEL  LPC HHFHC C+ KWL I AT
Sbjct: 334 GIMTECGTDSPIEHTLLQ-EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINAT 393

BLAST of CmoCh06G000340 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-64
Identity = 126/292 (43.15%), Postives = 175/292 (59.93%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           + YS P++  D+LWN A VL S V+L+ T  ERP+ P+R+WI  Y  QCL H+  V+ EY
Sbjct: 71  WGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEY 130

Query: 136 QK-----------SILHHGF----------EDPAAHRSIMKRLESMNTMTSSVWWVFGFY 195
            +           S  H  +          +D +   S +KR ES+NT+ S +WW+ GFY
Sbjct: 131 WRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFY 190

Query: 196 WIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIP-IVAFAYAMT 255
           W+V GG  LL ++P LYWL+V+FLA D+FF +FCV +A +V  +LCCC+P I+A  YA+ 
Sbjct: 191 WVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVA 250

Query: 256 TREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPV-----RARLELDNDHHIKELVLHPED 315
             EG S+ ++  LP Y F+       F+  +K +        + ++      E  L  ED
Sbjct: 251 GTEGVSEAELGVLPLYKFK------AFHSNEKNITGPGKMVPIPINGLCLATERTLLAED 310

Query: 316 SECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDT 341
           ++CCICLS YEDG EL+ LPCNHHFH  CI KWL+++ATCPLCK NI  G T
Sbjct: 311 ADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTT 356

BLAST of CmoCh06G000340 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 3.3e-64
Identity = 132/303 (43.56%), Postives = 176/303 (58.09%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           ++YS P++VLD +WNLAFV+V+  VL+ +  E P+ PLR+WI GY  QC++H+  V  EY
Sbjct: 68  WAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEY 127

Query: 136 QK-----------------SILHHGFEDPAA--------------------HRSIMKRLE 195
           ++                 S      ++                       + S  K LE
Sbjct: 128 RRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLE 187

Query: 196 SMNTMTSSVWWVFGFYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFS 255
           S NTM S +WWV GFYW+  GG  L Q SP+LYWL +VFL FD+FF++FCV +A V+  +
Sbjct: 188 SANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIA 247

Query: 256 LCCCIP-IVAFAYAMTTREGASDEDIRTLPKYTFRQA--PVFGTFNKEQ---KPVRARLE 315
           +CCC+P I+A  YA+  +EGAS EDI  L K+ FR+    +  T ++EQ          E
Sbjct: 248 VCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTE 307

Query: 316 LDNDHHIKELVLHPEDSECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCK 336
              D  ++  + H ED+ECCICLS YED TEL  LPC HHFHCGC+ KWL I ATCPLCK
Sbjct: 308 CGTDSPVEHALPH-EDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 367

BLAST of CmoCh06G000340 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 4.2e-11
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0

Query: 287 EDSECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKS 334
           E+  CCIC  +Y DG +L TL C H FH GC+ +WL +K TCP+CK+
Sbjct: 616 EEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPICKN 662

BLAST of CmoCh06G000340 vs. ExPASy TrEMBL
Match: A0A6J1FCD6 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita moschata OX=3662 GN=LOC111444117 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 6.6e-201
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0

Query: 1   MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE 60
           MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE
Sbjct: 1   MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE 60

Query: 61  DDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY 120
           DDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY
Sbjct: 61  DDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY 120

Query: 121 AFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180
           AFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG
Sbjct: 121 AFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180

Query: 181 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD 240
           HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD
Sbjct: 181 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD 240

Query: 241 EDIRTLPKYTFRQAPVFGTFNKEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQYED 300
           EDIRTLPKYTFRQAPVFGTFNKEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQYED
Sbjct: 241 EDIRTLPKYTFRQAPVFGTFNKEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQYED 300

Query: 301 GTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 343
           GTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV
Sbjct: 301 GTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 342

BLAST of CmoCh06G000340 vs. ExPASy TrEMBL
Match: A0A6J1I3D4 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita maxima OX=3661 GN=LOC111470167 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.0e-197
Identity = 337/342 (98.54%), Postives = 339/342 (99.12%), Query Frame = 0

Query: 1   MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE 60
           MEEERALRRSANGGSSVLR PTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE
Sbjct: 1   MEEERALRRSANGGSSVLRXPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE 60

Query: 61  DDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY 120
           DDDDEDGS+GFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY
Sbjct: 61  DDDDEDGSNGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY 120

Query: 121 AFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180
           AFQCLLHIGFVFFEYQ+SILHHGFED AAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG
Sbjct: 121 AFQCLLHIGFVFFEYQRSILHHGFEDRAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180

Query: 181 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD 240
           HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD
Sbjct: 181 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD 240

Query: 241 EDIRTLPKYTFRQAPVFGTFNKEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQYED 300
           EDIRTLPKYTFRQAPVFGTFNKEQKPV ARLELDNDHHIKELVLHPEDSECCICLSQYED
Sbjct: 241 EDIRTLPKYTFRQAPVFGTFNKEQKPVGARLELDNDHHIKELVLHPEDSECCICLSQYED 300

Query: 301 GTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 343
           GTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV
Sbjct: 301 GTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 342

BLAST of CmoCh06G000340 vs. ExPASy TrEMBL
Match: A0A6J1J3G3 (E3 ubiquitin-protein ligase At4g11680-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482323 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.5e-157
Identity = 287/352 (81.53%), Postives = 302/352 (85.80%), Query Frame = 0

Query: 1   MEEERALRRSANGGS---SVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPD 60
           MEEERALRR+ANGG+   SVLRYPTVSTTFTIPLTRYTTRLITS RHR LLADCAD R D
Sbjct: 1   MEEERALRRTANGGTLNDSVLRYPTVSTTFTIPLTRYTTRLITSGRHRPLLADCADSRSD 60

Query: 61  AEEDDDDEDGSSGFNHRSF-----SYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTP 120
            E+ DD  D    FN RS       YSMPIL+LDV+WNLAFV VSIVVLLSTFRERPSTP
Sbjct: 61  TEDHDDAND----FNRRSIVRENCFYSMPILILDVVWNLAFVFVSIVVLLSTFRERPSTP 120

Query: 121 LRLWISGYAFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFG 180
           LRLWISGY  QCLLH+GFVFFEYQ+S+  HGFED A HRSIMKRLESMNTMTSSVWWVFG
Sbjct: 121 LRLWISGYGLQCLLHVGFVFFEYQRSMALHGFEDRAYHRSIMKRLESMNTMTSSVWWVFG 180

Query: 181 FYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAM 240
           FYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFC+GMA VV FSLCCCIPI+AFAYAM
Sbjct: 181 FYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVVFFSLCCCIPIIAFAYAM 240

Query: 241 TTREGASDEDIRTLPKYTFRQAPVFGTF--NKEQKPVRARLELDNDHHIKELVLHPEDSE 300
           T REGAS+E IR LPKYTFRQA   G F   KE++P+ A  ELDNDH IKEL LHPEDSE
Sbjct: 241 TAREGASEEVIRALPKYTFRQA-ALGAFIHGKEREPIGATTELDNDHLIKELALHPEDSE 300

Query: 301 CCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 343
           CCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRI ATCPLCKS+I  GDTLV
Sbjct: 301 CCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRINATCPLCKSSICRGDTLV 347

BLAST of CmoCh06G000340 vs. ExPASy TrEMBL
Match: A0A5D3DQ81 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006360 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.9e-157
Identity = 278/344 (80.81%), Postives = 300/344 (87.21%), Query Frame = 0

Query: 1   MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE 60
           MEE+RALR + N   S+LRYPTVSTTFTIPLTRYTTRLI+SDRHR LLADCA+     + 
Sbjct: 1   MEEQRALRPTLN--HSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCAE-----DH 60

Query: 61  DDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY 120
            D D+     F   + SYSMPILVLDV+WNLAFVLVS+VVL STFRERPSTPLRLWISGY
Sbjct: 61  SDSDDFSRRSFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGY 120

Query: 121 AFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180
             QCLLH+GFVFFEYQ+S+ HHGFED AAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG
Sbjct: 121 GLQCLLHVGFVFFEYQRSMAHHGFEDRAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180

Query: 181 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD 240
            ALLQDSPRLYWLTVVFLAFDLFFILFC+GMA V+ FSLCCCIPIVAFAYAMTTREGAS+
Sbjct: 181 QALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFAYAMTTREGASE 240

Query: 241 EDIRTLPKYTFRQAPVFGTFN--KEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQY 300
           EDIRTLPKYTFRQA V GTFN  KE++P+ + +ELDN H IKEL LHPEDSECCICLS+Y
Sbjct: 241 EDIRTLPKYTFRQAAVLGTFNLGKEREPISSTVELDNGHRIKELALHPEDSECCICLSRY 300

Query: 301 EDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 343
           EDGTELYTLPCNHHFHCGCI KWLRI ATCPLCKSNI  GDTLV
Sbjct: 301 EDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRRGDTLV 337

BLAST of CmoCh06G000340 vs. ExPASy TrEMBL
Match: A0A1S3B880 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC103486858 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.9e-157
Identity = 278/344 (80.81%), Postives = 300/344 (87.21%), Query Frame = 0

Query: 1   MEEERALRRSANGGSSVLRYPTVSTTFTIPLTRYTTRLITSDRHRVLLADCADPRPDAEE 60
           MEE+RALR + N   S+LRYPTVSTTFTIPLTRYTTRLI+SDRHR LLADCA+     + 
Sbjct: 1   MEEQRALRPTLN--HSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCAE-----DH 60

Query: 61  DDDDEDGSSGFNHRSFSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGY 120
            D D+     F   + SYSMPILVLDV+WNLAFVLVS+VVL STFRERPSTPLRLWISGY
Sbjct: 61  SDSDDFSRRSFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGY 120

Query: 121 AFQCLLHIGFVFFEYQKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180
             QCLLH+GFVFFEYQ+S+ HHGFED AAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG
Sbjct: 121 GLQCLLHVGFVFFEYQRSMAHHGFEDRAAHRSIMKRLESMNTMTSSVWWVFGFYWIVMGG 180

Query: 181 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIPIVAFAYAMTTREGASD 240
            ALLQDSPRLYWLTVVFLAFDLFFILFC+GMA V+ FSLCCCIPIVAFAYAMTTREGAS+
Sbjct: 181 QALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFAYAMTTREGASE 240

Query: 241 EDIRTLPKYTFRQAPVFGTFN--KEQKPVRARLELDNDHHIKELVLHPEDSECCICLSQY 300
           EDIRTLPKYTFRQA V GTFN  KE++P+ + +ELDN H IKEL LHPEDSECCICLS+Y
Sbjct: 241 EDIRTLPKYTFRQAAVLGTFNLGKEREPISSTVELDNGHRIKELALHPEDSECCICLSRY 300

Query: 301 EDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDTLV 343
           EDGTELYTLPCNHHFHCGCI KWLRI ATCPLCKSNI  GDTLV
Sbjct: 301 EDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRRGDTLV 337

BLAST of CmoCh06G000340 vs. TAIR 10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 265.0 bits (676), Expect = 8.3e-71
Identity = 141/290 (48.62%), Postives = 183/290 (63.10%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           + YS P++ LD+LWN AFVLV+IV+LL    E+P+ P+R+WI GYA QCL+H+  V+ E+
Sbjct: 62  WGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEF 121

Query: 136 QK-------------SILHHGFEDPAAHRSIM--KRLESMNTMTSSVWWVFGFYWIVMGG 195
           +K                +   ED       +  K  ESMNT+ S VWW+ GFYW+V GG
Sbjct: 122 RKRNARSRPGDLEAAQATNQDSEDEDNDERFLSTKTCESMNTIISFVWWIVGFYWLVSGG 181

Query: 196 HALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIP-IVAFAYAMTTREGAS 255
             LLQ++  LYWLT VFLAFD+FF +FCV +A ++  +LCCC+P I+A  YA+  +EGAS
Sbjct: 182 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGAS 241

Query: 256 DEDIRTLPKYTFRQAPVFGTFNKEQK---------PVRARLE-LDNDHHIKELVLHPEDS 315
           + D+  LPKY F       T N ++K         PV A  E L N     E VL PED+
Sbjct: 242 EADLSILPKYRFH------TMNNDEKQSDGGGKMIPVDAASENLGN-----ERVLLPEDA 301

Query: 316 ECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGD 340
           +CCICLS YEDG EL +LPCNHHFH  CI KWL++ ATCPLCK NI  G+
Sbjct: 302 DCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGN 340

BLAST of CmoCh06G000340 vs. TAIR 10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-68
Identity = 131/286 (45.80%), Postives = 173/286 (60.49%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           ++YS P++ LD+LWNLAFV + + VL+ +  E+P+ PLR+W+ GY  QC LH+  V  EY
Sbjct: 103 WAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY 162

Query: 136 ----------------------QKSILHHGFEDPAAHRSIMKRLESMNTMTSSVWWVFGF 195
                                 Q+ +     ED     +  K LES NTM S +WW+ GF
Sbjct: 163 RRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGF 222

Query: 196 YWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIP-IVAFAYAM 255
           YW+  GG  L  DSP+LYWL ++FL FD+FF++FCV +A V+  ++CCC+P I+A  YA+
Sbjct: 223 YWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAV 282

Query: 256 TTREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPVRAR---LELDNDHHIKELVLHPEDS 315
             +EGAS  DI  +PK+ F +     T N E+   +AR    E   D  I E  L PED+
Sbjct: 283 ADQEGASKNDIDQMPKFRFTK-----TGNVEKLSGKARGIMTECGTDSPI-ERSLSPEDA 342

Query: 316 ECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNI 336
           ECCICL +YEDG EL  LPCNHHFHC CI KWL I + CPLCK NI
Sbjct: 343 ECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382

BLAST of CmoCh06G000340 vs. TAIR 10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.9e-67
Identity = 134/308 (43.51%), Postives = 178/308 (57.79%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           ++YS P++VLD++WNLAFV V+  +L+ + +E P  PLR+W+ GYA QC+LH+  V  EY
Sbjct: 94  WAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEY 153

Query: 136 QK-----------------------------------SILHHGFED------PAAHRSIM 195
           ++                                   S  + G +D           S+ 
Sbjct: 154 RRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVA 213

Query: 196 KRLESMNTMTSSVWWVFGFYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFV 255
           K LES NTM S +WW+ GFYW+  GG  L Q+SPR+YWL++VFL FD+FF++FCV +A V
Sbjct: 214 KHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACV 273

Query: 256 VCFSLCCCIP-IVAFAYAMTTREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPVR----- 315
           +  ++CCC+P I+A  YA+  +EGAS EDI  L K+ FR+    G  NK           
Sbjct: 274 IGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRK---LGDANKHTNDEAQGTTE 333

Query: 316 -ARLELDNDHHIKELVLHPEDSECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKAT 336
               E   D  I+  +L  ED+ECCICLS YEDGTEL  LPC HHFHC C+ KWL I AT
Sbjct: 334 GIMTECGTDSPIEHTLLQ-EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINAT 393

BLAST of CmoCh06G000340 vs. TAIR 10
Match: AT1G12760.2 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.9e-67
Identity = 134/308 (43.51%), Postives = 178/308 (57.79%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           ++YS P++VLD++WNLAFV V+  +L+ + +E P  PLR+W+ GYA QC+LH+  V  EY
Sbjct: 23  WAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEY 82

Query: 136 QK-----------------------------------SILHHGFED------PAAHRSIM 195
           ++                                   S  + G +D           S+ 
Sbjct: 83  RRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVA 142

Query: 196 KRLESMNTMTSSVWWVFGFYWIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFV 255
           K LES NTM S +WW+ GFYW+  GG  L Q+SPR+YWL++VFL FD+FF++FCV +A V
Sbjct: 143 KHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACV 202

Query: 256 VCFSLCCCIP-IVAFAYAMTTREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPVR----- 315
           +  ++CCC+P I+A  YA+  +EGAS EDI  L K+ FR+    G  NK           
Sbjct: 203 IGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRK---LGDANKHTNDEAQGTTE 262

Query: 316 -ARLELDNDHHIKELVLHPEDSECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKAT 336
               E   D  I+  +L  ED+ECCICLS YEDGTEL  LPC HHFHC C+ KWL I AT
Sbjct: 263 GIMTECGTDSPIEHTLLQ-EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINAT 322

BLAST of CmoCh06G000340 vs. TAIR 10
Match: AT2G01735.1 (RING-finger protein for embryogenesis )

HSP 1 Score: 247.3 bits (630), Expect = 1.8e-65
Identity = 126/292 (43.15%), Postives = 175/292 (59.93%), Query Frame = 0

Query: 76  FSYSMPILVLDVLWNLAFVLVSIVVLLSTFRERPSTPLRLWISGYAFQCLLHIGFVFFEY 135
           + YS P++  D+LWN A VL S V+L+ T  ERP+ P+R+WI  Y  QCL H+  V+ EY
Sbjct: 71  WGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEY 130

Query: 136 QK-----------SILHHGF----------EDPAAHRSIMKRLESMNTMTSSVWWVFGFY 195
            +           S  H  +          +D +   S +KR ES+NT+ S +WW+ GFY
Sbjct: 131 WRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFY 190

Query: 196 WIVMGGHALLQDSPRLYWLTVVFLAFDLFFILFCVGMAFVVCFSLCCCIP-IVAFAYAMT 255
           W+V GG  LL ++P LYWL+V+FLA D+FF +FCV +A +V  +LCCC+P I+A  YA+ 
Sbjct: 191 WVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVA 250

Query: 256 TREGASDEDIRTLPKYTFRQAPVFGTFNKEQKPV-----RARLELDNDHHIKELVLHPED 315
             EG S+ ++  LP Y F+       F+  +K +        + ++      E  L  ED
Sbjct: 251 GTEGVSEAELGVLPLYKFK------AFHSNEKNITGPGKMVPIPINGLCLATERTLLAED 310

Query: 316 SECCICLSQYEDGTELYTLPCNHHFHCGCIGKWLRIKATCPLCKSNIHWGDT 341
           ++CCICLS YEDG EL+ LPCNHHFH  CI KWL+++ATCPLCK NI  G T
Sbjct: 311 ADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTT 356

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q93Z922.4e-6745.80E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116... [more]
Q9LN712.7e-6643.51E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127... [more]
Q8GUU22.5e-6443.15E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV... [more]
Q8LDB83.3e-6443.56E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
Q7XTV74.2e-1153.19Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399... [more]
Match NameE-valueIdentityDescription
A0A6J1FCD66.6e-201100.00E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1I3D42.0e-19798.54E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1J3G33.5e-15781.53E3 ubiquitin-protein ligase At4g11680-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A5D3DQ815.9e-15780.81E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3B8805.9e-15780.81E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC1034868... [more]
Match NameE-valueIdentityDescription
AT1G68070.18.3e-7148.62Zinc finger, C3HC4 type (RING finger) family protein [more]
AT4G11680.11.7e-6845.80Zinc finger, C3HC4 type (RING finger) family protein [more]
AT1G12760.11.9e-6743.51Zinc finger, C3HC4 type (RING finger) family protein [more]
AT1G12760.21.9e-6743.51Zinc finger, C3HC4 type (RING finger) family protein [more]
AT2G01735.11.8e-6543.15RING-finger protein for embryogenesis [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 291..331
e-value: 4.6E-6
score: 36.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 290..332
e-value: 2.8E-12
score: 46.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 291..332
score: 12.238477
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 269..338
e-value: 9.5E-18
score: 65.2
NoneNo IPR availablePANTHERPTHR45977:SF19RING-FINGER UBIQUITIN LIGASEcoord: 19..342
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 19..342
NoneNo IPR availableCDDcd16474RING-H2_RNF111_likecoord: 290..334
e-value: 2.69706E-18
score: 75.4257
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 282..336

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G000340.1CmoCh06G000340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane