CmoCh05G013900 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G013900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L31
Location	Cmo_Chr05: 10720634 .. 10722413 (-)
RNA-Seq Expression	CmoCh05G013900
Synteny	CmoCh05G013900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTATATAAATTCAGCATTAGGGTTTTTTGGTGCCCCTGAAGACCATCTCTTTCACTGGAGGCCACTCTTCGCGTTGCCGAACGCCAGGTCTCTACTCTTGAACTCTGAACATGTCTTCTCAATTATTAGTTCAATACTTCGTTTTCGCTTGTCTTGAAACTTCGTAAACCGGTAAATCATGATCTGTTTTGGTTTTGATTACCTTTTTGCTTTTTATGCGATCGGCTTGCCCGCTTCCGGTCGTTTCTAATCTGTGAAGCATATGAATCGTGTTGATATATATTCGGCATTTCTGCATTTGAGAATCTAGAACTCGTAGAAATTTTGTCTGCTTATCTTCAAAAGGCTTTCTGTGTACAGGTATTTTTGAAGAGATTTAAAAATGGTAGAGAAGACCAAAGGAAGAAAGGAGGAGGTAGTCTCCAGAGAGTACACTATTAACCTTCACAAGCGCCTTCATGGCTGGTACGTTCTTTTTATCTGCCTCTCATATGTATTTGTCCTTTTTAATGTTAGGTTTGTATATTCTAGCTGATTATGTACTTTATGTGGGAGGAGTAACCTCGATTTAGTAGTCTTTGCGTCATAAATTCATCAGATTTTTGTACTTTACTTGGAAGTGTGTGCCATGAGTTTACTATTGCTTCCTTTTTCCTAGGACTATAGATTGGTATTACTAGATTTTAGTTCATACTGTCTATTGTACTCTGAATTGGACATACAACTTGACAGTTTGAGGTTTGGGATTTCGGATTTGTTGCTAATTGAAGTTATAGTTGTTGTAGGGCTATAATATTACTTTTGTCTATAAATAGCCAGAATAAGCATATCTCCCCACTACTTTAGCATGTTTTGTTCTATCGTCTGGATATGAGATGAATTAGAGCCTTTGGACGGAACCAATCCAGGGTTGTTGATACTCTGTTATGAAGAGTTAGAAGCGTTAGAAGCGTCAGCTGGTCCATTCCATGCTTTGTATGAATAGTGTCCCCTGGAGCCCGTGATGCACAAGTATTTTAACCATTTTCGTTTATTATCTAGTAGGTTACTTTCATTACCATATATAGGCTTTGATACACATACAGTGCTACTCATTAACCTGTACTGTTTATCTATATCCTAAACTATTATTAACATAACCTCCCTAATGTCCATCTCTATCTGGAAATAATGTATAACCGCAGGATCTGTTTGCTACTCATTAACCTGTACTGTTTGTGAATGAACAGCACCTTTAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGTACAAAGGATGTGAGAGTGGATGTTAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCCAGAAGAATTAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTAACAGTTGCAGAAATCCCCGCAGAAGGACTGAAGGGACTCGGGACTAAGGTCATTGAAGAAGATGATTGATTCGTCAACTGTTTTCTCGAAGAGGTGGTAAGATGAGATTAGGTTGTAGGTTTGATTTGTTGAATGAAAGAAGACTCATATTTTAATTGTTGTCTTTGGAGATCTTTTTTGAATTAACTTATAATTCCTGGACTTGTTCAGTATTAAGTTCAATTGTTTTTGGGTTACATTAACCGAGGCTTTTTGAATTAGCAAATCATATCCATGTTTTATAATTCAATCTAAATACCGTTTTATGTTTGTTTGGTAAATCATAATCTTCCCTAGG

mRNA sequence

CCCTTATATAAATTCAGCATTAGGGTTTTTTGGTGCCCCTGAAGACCATCTCTTTCACTGGAGGCCACTCTTCGCGTTGCCGAACGCCAGGTATTTTTGAAGAGATTTAAAAATGGTAGAGAAGACCAAAGGAAGAAAGGAGGAGGTAGTCTCCAGAGAGTACACTATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGTACAAAGGATGTGAGAGTGGATGTTAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCCAGAAGAATTAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTAACAGTTGCAGAAATCCCCGCAGAAGGACTGAAGGGACTCGGGACTAAGGTCATTGAAGAAGATGATTGATTCGTCAACTGTTTTCTCGAAGAGGTGGTAAGATGAGATTAGGTTGTAGGTTTGATTTGTTGAATGAAAGAAGACTCATATTTTAATTGTTGTCTTTGGAGATCTTTTTTGAATTAACTTATAATTCCTGGACTTGTTCAGTATTAAGTTCAATTGTTTTTGGGTTACATTAACCGAGGCTTTTTGAATTAGCAAATCATATCCATGTTTTATAATTCAATCTAAATACCGTTTTATGTTTGTTTGGTAAATCATAATCTTCCCTAGG

Coding sequence (CDS)

ATGGTAGAGAAGACCAAAGGAAGAAAGGAGGAGGTAGTCTCCAGAGAGTACACTATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGTACAAAGGATGTGAGAGTGGATGTTAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCCAGAAGAATTAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTAACAGTTGCAGAAATCCCCGCAGAAGGACTGAAGGGACTCGGGACTAAGGTCATTGAAGAAGATGATTGA

Protein sequence

MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

Homology

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BLAST of CmoCh05G013900 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.2e-55
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           M +KTKGRKEEVV+REYTINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+IE++D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]

BLAST of CmoCh05G013900 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-55
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++IEEDD
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-53
Identity = 106/116 (91.38%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 5   TKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHI 64
           +K RKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHI
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 65  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VI+E++
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]

BLAST of CmoCh05G013900 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 5.1e-52
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of CmoCh05G013900 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVV+REYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of CmoCh05G013900 vs. ExPASy TrEMBL
Match: A0A5D3CKL3 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00820 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. ExPASy TrEMBL
Match: A0A6J1KK05 (60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. ExPASy TrEMBL
Match: A0A6J1G2V4 (60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111450292 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. ExPASy TrEMBL
Match: A0A1S3C9P7 (60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103498384 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. ExPASy TrEMBL
Match: A0A6J1DKK4 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. NCBI nr
Match: XP_008459190.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022999548.1 60S ribosomal protein L31 [Cucurbita maxima] >XP_038889415.1 60S ribosomal protein L31 [Benincasa hispida] >KAA0061504.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7030475.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10769.1 60S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 4.5e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. NCBI nr
Match: XP_022154770.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmoCh05G013900 vs. NCBI nr
Match: XP_008450816.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928011.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928015.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022960857.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_023516766.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >XP_023516767.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >KAG6588019.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021916.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10122.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7023639.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI+E+D
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of CmoCh05G013900 vs. NCBI nr
Match: KAG6589975.1 (60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 94  MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 153

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI+E+D
Sbjct: 154 NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 213

[Close]

BLAST of CmoCh05G013900 vs. NCBI nr
Match: XP_039030275.1 (60S ribosomal protein L31-like [Hibiscus syriacus] >KAE8677148.1 60S ribosomal protein L31 [Hibiscus syriacus])

HSP 1 Score: 231.1 bits (588), Expect = 5.0e-57
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKT+GRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTRGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 120

[Close]

BLAST of CmoCh05G013900 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 204.9 bits (520), Expect = 3.6e-53
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of CmoCh05G013900 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 203.8 bits (517), Expect = 8.0e-53
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVV+REYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of CmoCh05G013900 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-52
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVV+REYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE++
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of CmoCh05G013900 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 130.6 bits (327), Expect = 8.6e-31
Identity = 73/119 (61.34%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVD    
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---- 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 121
                                         EE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 61  ------------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:

BLAST of CmoCh05G013900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46290	2.2e-55	90.00	60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1	[more]
Q9MAV7	3.7e-55	90.83	60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1	[more]
Q9M573	2.1e-53	91.38	60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1	[more]
P51420	5.1e-52	85.71	60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2	[more]
Q9STR1	1.1e-51	84.87	60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1	[more]

BLAST of CmoCh05G013900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKL3	2.2e-58	100.00	60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1KK05	2.2e-58	100.00	60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1	[more]
A0A6J1G2V4	2.2e-58	100.00	60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111450292 PE=3 SV=...	[more]
A0A1S3C9P7	2.2e-58	100.00	60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103498384 PE=3 SV=1	[more]
A0A6J1DKK4	1.1e-57	98.33	60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV...	[more]

BLAST of CmoCh05G013900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459190.1	4.5e-58	100.00	PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosoma...	[more]
XP_022154770.1	2.3e-57	98.33	60S ribosomal protein L31 [Momordica charantia]	[more]
XP_008450816.1	2.9e-57	98.33	PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosoma...	[more]
KAG6589975.1	2.9e-57	98.33	60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_039030275.1	5.0e-57	97.50	60S ribosomal protein L31-like [Hibiscus syriacus] >KAE8677148.1 60S ribosomal p...	[more]

BLAST of CmoCh05G013900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56710.1	3.6e-53	85.71	Ribosomal protein L31e family protein	[more]
AT4G26230.1	8.0e-53	84.87	Ribosomal protein L31e family protein	[more]
AT2G19740.1	1.8e-52	85.71	Ribosomal protein L31e family protein	[more]
AT5G56710.2	8.6e-31	61.34	Ribosomal protein L31e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 10..93 e-value: 1.4E-49 score: 180.7
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 11..92 e-value: 1.8E-42 score: 143.4
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 1..120
IPR000054	Ribosomal protein L31e	CDD	cd00463	Ribosomal_L31e	coord: 9..92 e-value: 2.1949E-32 score: 107.27
IPR023621	Ribosomal protein L31e domain superfamily	GENE3D	3.10.440.10		coord: 9..120 e-value: 1.6E-49 score: 168.4
IPR023621	Ribosomal protein L31e domain superfamily	SUPERFAMILY	54575	Ribosomal protein L31e	coord: 11..92
None	No IPR available	PANTHER	PTHR10956:SF33	60S RIBOSOMAL PROTEIN L31-2-RELATED	coord: 1..120
IPR020052	Ribosomal protein L31e, conserved site	PROSITE	PS01144	RIBOSOMAL_L31E	coord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G013900.1	CmoCh05G013900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome