CmoCh05G013430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G013430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Peroxiredoxins prx-1 prx-2 prx-3
Location	Cmo_Chr05: 10451643 .. 10453687 (-)
RNA-Seq Expression	CmoCh05G013430
Synteny	CmoCh05G013430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGTAAGCTTCTGTTAACATTGTCTTACATTAGTTTGCTCCATTCTTATGCCTTATAAGTGTTTCACAACTTTTAAGATTACCAAATGGTATAGAGTCGTTAGAACATGATGAAATAATCTTTAATCAAAAGATGGATGGATGTTATAAAGAGATGATCGAGGAGTTGTGAGGAACTCTAGTGATGTTTGGGCCATTGACAGGCTCTATGTTTCTCTTTGGGTGTCGATGACGACGGTTTTTTGTAATTACTCGATAGGTCTCATTTTACATGACTGGAACTCCTTTCTTTTGCTGGGCCTCCTTTTGTGGGTTTGTTTTTTTGGATGCCCTTGCACTCTTTCAGTTTTTCTCAATGAAAGTTCGGCGGTTTCTTGTAAACTAAAAAAAATCAAATGATGGAAGTAGTCTAATAGAACGGCTAAGCTGATTCAGCATTTTGTTTTTTCTTTCATTTTTATTCGAATTTAATACTCCATGAGTTTGTAGGAATCCCAATAACTGAAATGTAATGTATATCATGTATGAAGGCCCATCCCTGTTGTCATGTATGGTAAAGCTATCAAACAAAACAAGGGCATTCTGATATTGAAGTGTCATATTAGATCCAAAATTGTGTTTGCCCGCCCTTTGCCAATGGATAACCATTGAAAGTTCTGATCTATCTGTTTCTCTCTAGCACTCTATGGGGTAAATCAGTATGAACTTTTTAGCTATTGGATCAGTATAATTCCATGGGGCCTCTTTTCTTCATAATTTGGAACTGTTCTAGCAAATTCACCGACTCCTGAGAATGATTCACTTCAATTATTGAGTGGAGTGGGAGTATCTGATCCTCCATGATCAGTGGATATGAAAAGAACCTCTTGATGTGGATGAGTTTTGTCACAGTTCTACAGTCTCAAATGCATCAAATAACCTTAGTTTTGAACTTCAGTTACTGCCCTTCAGATATTGTGCTTAGTGGAAATTATATATTTTGTACGACATATTGCTTTGACCCGTTACGTATTGTCGTTAGCCTCACAGTTTTAAAATGCGTCTGCTAGGGAAAGGTTTCCATACCCCTATCAGGAATGTTTCGTTCCCATCTCAAACCGATGTGAGATCTCAGGGGACCAGCGTCCTAGCTGGCACACCGCTCAGTGTCTGGCTCTGATACCATTTGTAACATGTCAAACCCACCACTAGCAGATATTGTGCGTTTTGACCTATTACGTATCACCGTCAGCCTCATGATTTTAAAACGCATCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCTTTTCCAACCGATGGGAGATCTCATATATTTAGTCCTCCTTTCTGATTTGTATTCAAGTTGTGGAAGATATTGATATTATATCCTAGAATGACCACATCATTATAATTATTGATACTAAACAAATAGAACTTAGCCAGATTCCTCTTTTTGACATAAGAGATAGCGTGGGCTTTTTTTGTATGGTTGCTTTCACTAAGGACAAACCGAGAAGAATAAAAGATATCACCTCTTGAATTGCACTATAACTACTTCTAGCCTCACGCACTAGTTGAGGATAAATCTCTTAATACTGATCATATTTATATTGTGATTAACAGAGCTCTTTCTCTTTTAAATACTTGAGTTTCCATACTTCTTGCAGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGATGTCATCGGCATGGATGAAACGATCGAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA

mRNA sequence

ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGATGTCATCGGCATGGATGAAACGATCGAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA

Coding sequence (CDS)

ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGATGTCATCGGCATGGATGAAACGATCGAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA

Protein sequence

MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS

Homology

[Close]

BLAST of CmoCh05G013430 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.1e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 10  LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAE 69
           LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAE
Sbjct: 6   LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAE 65

Query: 70  TVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS 129
           TVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
Sbjct: 66  TVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of CmoCh05G013430 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 9.3e-31
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 47  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 106
           MASDGSL V VSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 107 SKSMPADHPVASLSSKESLGSS 129
           SKSMPA++PVASLS K SLGSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of CmoCh05G013430 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.2e-30
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 47  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 106
           MASDGSLSV VSTSPKH NRDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRS SSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 107 SKSMPADHPVASLSSKESLGSS 129
           SKSMP ++PVASLS KESL SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

[Close]

BLAST of CmoCh05G013430 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.7e-30
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 47  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 106
           MASDGSL V VS+SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 107 SKSMPADHPVASLSSKESLGSS 129
           SKSMPA++PVASLS K SLGSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of CmoCh05G013430 vs. ExPASy TrEMBL
Match: A0A6A1UK22 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16
Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 47  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 106
           MAS GS  + VST+PK G  +A T  S SPKGQCLCSPT H+GSFRCRLHRS SSAWMKR
Sbjct: 1   MASRGS-QLSVSTTPKSGKGEAVTGASDSPKGQCLCSPTTHKGSFRCRLHRS-SSAWMKR 60

Query: 107 SKSMPADHPVASLSSK 123
           SKSMPA   VA+LS K
Sbjct: 61  SKSMPASSSVAALSPK 74

[Close]

BLAST of CmoCh05G013430 vs. NCBI nr
Match: XP_022946647.1 (uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946649.1 uncharacterized protein LOC111450652 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 10  LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAE 69
           LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAE
Sbjct: 6   LLLVVYYIPNNLISDEQQVQNCRCSFVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAE 65

Query: 70  TVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS 129
           TVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
Sbjct: 66  TVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of CmoCh05G013430 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 118/136 (86.76%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRCSFVQ--------SICCRLSADMASDGS 60
           MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCR  F          S+   +SADMASDGS
Sbjct: 1   MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGS 60

Query: 61  LSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA 120
           LSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA
Sbjct: 61  LSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 120

Query: 121 DHPVASLSSKESLGSS 129
           DHPVASLSSKESLGSS
Sbjct: 121 DHPVASLSSKESLGSS 136

[Close]

BLAST of CmoCh05G013430 vs. NCBI nr
Match: KAG6599447.1 (hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 35  FVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCR 94
           FVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCR
Sbjct: 11  FVQSICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCR 70

Query: 95  LHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS 129
           LHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS
Sbjct: 71  LHRSMSSAWMKRSKSMPADHPVASLSSKESLGSS 104

[Close]

BLAST of CmoCh05G013430 vs. NCBI nr
Match: KAG6586427.1 (hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.3 bits (373), Expect = 4.6e-32
Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 44  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 103
           SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAW
Sbjct: 57  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 116

Query: 104 MKRSKSMPADHPVASLSSKESLGSS 129
           MKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 117 MKRSKSMPANKPVASLSPKETLGSS 141

[Close]

BLAST of CmoCh05G013430 vs. NCBI nr
Match: KAG7021282.1 (hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.3 bits (373), Expect = 4.6e-32
Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 44  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 103
           SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAW
Sbjct: 24  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 83

Query: 104 MKRSKSMPADHPVASLSSKESLGSS 129
           MKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 84  MKRSKSMPANKPVASLSPKETLGSS 108

[Close]

BLAST of CmoCh05G013430 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 72  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA 113
           ++S  K  CLCSPT H GSFRCR+HRS+S   ++R+KS+ A
Sbjct: 36  QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of CmoCh05G013430 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 72  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPA 113
           ++S  K  CLCSPT H GSFRCR+HRS+S   ++R+KS+ A
Sbjct: 36  QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of CmoCh05G013430 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 72  RSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPAD 114
           +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P++
Sbjct: 57  KSSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

[Close]

BLAST of CmoCh05G013430 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 41.2 bits (95), Expect = 7.3e-04
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 77  KGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVAS 119
           K  C+C+PT H+GSFRCRLHRS +++    +  +    P+ S
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSATSHGAATAELHLPKPLLS 103

[Close]

BLAST of CmoCh05G013430 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related )

HSP 1 Score: 41.2 bits (95), Expect = 7.3e-04
Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 54  SVVVSTSPKHGNRDAETVRSSSPKG---QCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSM 113
           S V S S  + +   +  RSSS K     CLCSPT H GSFRCR HR  S   + R+ S+
Sbjct: 35  STVESKSQDNNSPSLKRWRSSSGKSTRLNCLCSPTTHAGSFRCRYHRVDS---LTRAGSI 94

Query: 114 PADHPVASLSSKES 125
            ++  V  LSSK S
Sbjct: 95  GSNLAVL-LSSKSS 104

The following BLAST results are available for this feature:

BLAST of CmoCh05G013430 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G013430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G498	8.1e-59	100.00	uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A5A7V1X5	9.3e-31	89.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LKU3	1.2e-30	89.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1	[more]
A0A5D3CHP3	2.7e-30	87.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6A1UK22	1.7e-16	71.05	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1	[more]

BLAST of CmoCh05G013430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946647.1	1.7e-58	100.00	uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 unchar...	[more]
KAG7030425.1	1.7e-55	86.76	hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599447.1	2.6e-43	100.00	hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6586427.1	4.6e-32	89.41	hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021282.1	4.6e-32	89.41	hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh05G013430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67910.1	7.8e-06	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	7.8e-06	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13227.1	1.3e-05	50.00	serine-rich protein-related	[more]
AT3G56500.1	7.3e-04	42.86	serine-rich protein-related	[more]
AT5G55980.1	7.3e-04	44.59	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..79
None	No IPR available	PANTHER	PTHR33132:SF37	SERINE-RICH PROTEIN-LIKE PROTEIN	coord: 44..121
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 44..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G013430.1	CmoCh05G013430.1	mRNA