CmoCh05G013230 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAAACCAGATGAAAAGAGAAGAAAACAAGAGACTGAGGAGACGCTGGAATTCGGGAAAACCATCAAACTCACTCCTACCACTGAAATCATGTGAGCTTCAATTGCTCAGATTCACTTCATTTCATTAATTCATTCATCTTAAATGTTTATAAATACTCAGCCATTTTTCAATTACACTTCAAACTGAAGCTTCCCTGTTTTTTGATCTTCCAACAATGGCGAAGAATTTGGCTCAGGCATTTCTCGAGAGAAACAATTTGGCCTCAAATGACCCAAAAGTGGCCATGGCGAAGCGCTGTGCTAGAGGTAAACCTTTCGATCTTTTCTTTTTACGAGAATTTTCATGAGGAAAAGAAATTTAATGGGTCTGTTGGATTTTTAGTTGCTCTGCTTTGATGATACCACACTGTGATGAATTTGATGAGTTGAGTTGTTGACAGTAGTGAGTGATTGATCATAATGATGGGTTTAAGATTTGGTTTTTTGATAGTGCCTTTTAGGTGTTCGACGAAATTCCCCAAAGAGGGTTTTGTTGTTTTAGCTTCAAGAATGGATTGAAGTAAAAGTAATATGATTGGGGAACCATTTTCAACTCCCTCCACCAACTCTTCTTTTTTAGTTAATTATTTAAGGTAAAAGCTAAAGAGAGATGGGGTGTGATCGATGCGCATGTTGTGTTCTTGACTGATTTGATTGTTTTGATGTATTGGGTTGTGGCCCATGATCCACTTCAGATTTGGTGCCATGAAAATAATTGAATTCTGATGTTGTGTTTTTCAAATCATTCTCTTCACAAATTTGCTTTTATTGATGAACAGAGGGTGTGATAGCTGGAGCTAAAGCAGCTGCCATTGCAAGTATTGCCACTGCTATTCCCACCGTAAGTTTCCACCTTCATAATGCACATCCAGATCTTTATCTTTCCTTTTCTGAAGAACTTAATCATCAACTGATGTAGATTACCTTAACGCACTACTAGTCATGAATTTATGTGGATATTTGGGTTTATTGCTAGTGTAATAGCTTAAGTCTACCGCACCCGCTAGGTTAGTAGATATTGTCTTTTTTGAGCTTTCTCTCAAGATTTTTAAAACGCATCTACTATAGAGAGATTTTCACCCTTATAAAAAATGCTTCATTCAACTTCTCAACCGGTGTGGGATCTCACAATCCACCCCCTTCGGGGCCCAACGTCCTCGCTGCCACTTGTTCCCTTCTCCAATTGATGTGAGACCCCCCAATCCGCCCCCCTTTAGGGCCAGCGTCTTTGTTGGCACACCGCCTCGTGTCCACCCCCTTTGGAGCTTAGCCTCCTCGCTGACACATCACCTGGTGTTTGGTAACGGCCCAAGCCCATCACTAGCAGATATTGTCCTCTTTGAGCTTTCCCTTTCAGGTTTCCCTCAAGATTATTAAAATGCGTCTACAACGGAGAGGTTTCCACACCCTTATAAAGAATGTTTAGTTCTCTTCCCCAACTGACGGGATCTCACAATTTTAAACTTTGAAACCTACTTTCTATTTTGTTCCCTAAAATTTGTCCCTCCCTATGAAAATTTCTGGATCTTCCCCTAATCAAGATAGAGGCACCATGCAACTGCTCTTTCACCAATCATGGTGGTTGGAGCTAGCTGCTGGCTGGCCACATCCTTCAACCTGAACAATAAGAGACATGTTTGGGAGTGATTTCGAAAGGGTTCGAATCACTTTCATGCATGCTTTCAATCCTTCAAAATCAATTTTGATGGTACAAAACTCGAATATAGAAGTGTAAAATCAACGTGATTTTAGATACTACTAGATTCGAGCTATCCAATCCATAAGTAGAGTTGTTATCATTTTGCAGCTGGCCAGCGTGAGGATGCTGCCATGGGCAAAAGCTAATCTGAATCACGCAGCTCAAGCTCTCATAATCTCCTCAGGTTTATCTTCTTCTTCTTCTTCTTCCCTCTTAGCAGCAGCCAAATCATTTCATATTCTTACATGGATTTTGGAATGGCAGTGGCTGGAGCAGCTTACTTCATAGTGGCTGACAAGACTGTTCTAGCAACAGCAAGAAGAAACTCCTTCAAGCAAAAACCCAACGCTGAAACATACGAATTCAAGTGAATTCTCAACCTTCAAATTTGAGTGTGACCATTGGACGAAGCTATAAGGGACTTACACACTTGAAGAAGCTATCCATTTCAATATTAGCTCTTTCAATTTACCCTTCAATCTCGTACTAAGAAAATCTATGTAAATCCCTTTGATGTTCGAATAAAAAAGTGGGTTTTTAGTTATTCGTTTCGTCAATCCTACCTTTTCAAAAGTCTAATCGATTCACTCGTGAAATTTTAGAATTTAAGTTATACAATTATTAGTTTGAGATCTTAAT CAGAAACCAGATGAAAAGAGAAGAAAACAAGAGACTGAGGAGACGCTGGAATTCGGGAAAACCATCAAACTCACTCCTACCACTGAAATCATGTGAGCTTCAATTGCTCAGATTCACTTCATTTCATTAATTCATTCATCTTAAATGTTTATAAATACTCAGCCATTTTTCAATTACACTTCAAACTGAAGCTTCCCTGTTTTTTGATCTTCCAACAATGGCGAAGAATTTGGCTCAGGCATTTCTCGAGAGAAACAATTTGGCCTCAAATGACCCAAAAGTGGCCATGGCGAAGCGCTGTGCTAGAGAGGGTGTGATAGCTGGAGCTAAAGCAGCTGCCATTGCAAGTATTGCCACTGCTATTCCCACCCTGGCCAGCGTGAGGATGCTGCCATGGGCAAAAGCTAATCTGAATCACGCAGCTCAAGCTCTCATAATCTCCTCAGTGGCTGGAGCAGCTTACTTCATAGTGGCTGACAAGACTGTTCTAGCAACAGCAAGAAGAAACTCCTTCAAGCAAAAACCCAACGCTGAAACATACGAATTCAAGTGAATTCTCAACCTTCAAATTTGAGTGTGACCATTGGACGAAGCTATAAGGGACTTACACACTTGAAGAAGCTATCCATTTCAATATTAGCTCTTTCAATTTACCCTTCAATCTCGTACTAAGAAAATCTATGTAAATCCCTTTGATGTTCGAATAAAAAAGTGGGTTTTTAGTTATTCGTTTCGTCAATCCTACCTTTTCAAAAGTCTAATCGATTCACTCGTGAAATTTTAGAATTTAAGTTATACAATTATTAGTTTGAGATCTTAAT ATGGCGAAGAATTTGGCTCAGGCATTTCTCGAGAGAAACAATTTGGCCTCAAATGACCCAAAAGTGGCCATGGCGAAGCGCTGTGCTAGAGAGGGTGTGATAGCTGGAGCTAAAGCAGCTGCCATTGCAAGTATTGCCACTGCTATTCCCACCCTGGCCAGCGTGAGGATGCTGCCATGGGCAAAAGCTAATCTGAATCACGCAGCTCAAGCTCTCATAATCTCCTCAGTGGCTGGAGCAGCTTACTTCATAGTGGCTGACAAGACTGTTCTAGCAACAGCAAGAAGAAACTCCTTCAAGCAAAAACCCAACGCTGAAACATACGAATTCAAGTGA MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPWAKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK Homology
BLAST of CmoCh05G013230 vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-31 Identity = 73/97 (75.26%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of CmoCh05G013230 vs. ExPASy TrEMBL
Match: A0A6J1G2N4 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111450241 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 5.0e-49 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmoCh05G013230 vs. ExPASy TrEMBL
Match: A0A6J1KEY8 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111493696 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CmoCh05G013230 vs. ExPASy TrEMBL
Match: A0A5A7V781 (Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00100 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44 Identity = 102/110 (92.73%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of CmoCh05G013230 vs. ExPASy TrEMBL
Match: A0A1S3C6F4 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44 Identity = 102/110 (92.73%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of CmoCh05G013230 vs. ExPASy TrEMBL
Match: A0A0A0LFY1 (Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.3e-44 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of CmoCh05G013230 vs. NCBI nr
Match: KAG6599412.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmoCh05G013230 vs. NCBI nr
Match: KAG7030400.1 (hypothetical protein SDJN02_08747, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmoCh05G013230 vs. NCBI nr
Match: XP_022946030.1 (early nodulin-93-like [Cucurbita moschata]) HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmoCh05G013230 vs. NCBI nr
Match: XP_022999275.1 (early nodulin-93-like [Cucurbita maxima]) HSP 1 Score: 198.7 bits (504), Expect = 2.6e-47 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CmoCh05G013230 vs. NCBI nr
Match: XP_023545661.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198.4 bits (503), Expect = 3.3e-47 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of CmoCh05G013230 vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related ) HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19 Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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